mRNA_Ecto-sp9_F_contig8720.16907.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig8720.16907.1
Unique NamemRNA_Ecto-sp9_F_contig8720.16907.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig8720.16907.1 vs.
Match: Acetyl-CoA (carboxylase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG6_ECTSI)

HSP 1 Score: 541 bits (1394), Expect = 1.290e-183
Identity = 268/271 (98.89%), Postives = 270/271 (99.63%), Query Frame = 1
Query:    1 IGLVEELKPKFKVAWNDESNPAQGFKYLYLNEEDYEALEEGTVNAQEVVEGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPVTDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQV 813
            IGLVEELKPKFKVAWNDESNPAQGFKYLYLN EDYEALEEGTVNA+EVVEGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPVTDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQ+
Sbjct:  467 IGLVEELKPKFKVAWNDESNPAQGFKYLYLNAEDYEALEEGTVNAREVVEGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPVTDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQI 737          
BLAST of mRNA_Ecto-sp9_F_contig8720.16907.1 vs.
Match: Acetyl-CoA (carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0S0_9PHAE)

HSP 1 Score: 537 bits (1384), Expect = 7.380e-174
Identity = 267/271 (98.52%), Postives = 269/271 (99.26%), Query Frame = 1
Query:    1 IGLVEELKPKFKVAWNDESNPAQGFKYLYLNEEDYEALEEGTVNAQEVVEGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPVTDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQV 813
            IGLVEELKPKFKVAWNDESNPAQGFKYLYL+ EDYEALEEGTV AQEVVEGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPVTDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQ+
Sbjct: 1520 IGLVEELKPKFKVAWNDESNPAQGFKYLYLSAEDYEALEEGTVIAQEVVEGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPVTDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQI 1790          
BLAST of mRNA_Ecto-sp9_F_contig8720.16907.1 vs.
Match: Acetyl-CoA (carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCC4_9STRA)

HSP 1 Score: 439 bits (1130), Expect = 1.630e-138
Identity = 216/270 (80.00%), Postives = 241/270 (89.26%), Query Frame = 1
Query:    1 IGLVEELKPKFKVAWNDESNPAQGFKYLYLNEEDYEALEEGTVNAQEVVEGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPVTDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQ 810
            IGLV++LKPKFK+AWNDE++P  GFKYLYL++ DY+AL EGTVNA++V   GE R+AL DIIGQVHGIGVENLRGSGMIAGETSRAYD+AFTLSYVTGRSVGIGAYLVRLGQRTIQM+NGPIILTG+SALNKLLGREVYTSQDQLGGPQVM PNGVSHL V +DQEGV +IL+WLSYVPKTA S P   P+TDP+ R+V   P K PYDPRD+C G+V  DGS WV GFFDRGSYQEYL+GWGKSVVVGRAR+GGIPMG+INVETRLSEQ
Sbjct: 1469 IGLVDDLKPKFKIAWNDENSPGLGFKYLYLSDTDYKALAEGTVNAEKVEHMGETRWALKDIIGQVHGIGVENLRGSGMIAGETSRAYDQAFTLSYVTGRSVGIGAYLVRLGQRTIQMKNGPIILTGYSALNKLLGREVYTSQDQLGGPQVMFPNGVSHLVVEDDQEGVAQILRWLSYVPKTADSPPPQLPITDPITRKVEYMPPKTPYDPRDMCTGRVAPDGS-WVAGFFDRGSYQEYLAGWGKSVVVGRARLGGIPMGIINVETRLSEQ 1737          
BLAST of mRNA_Ecto-sp9_F_contig8720.16907.1 vs.
Match: Hypothetical (protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M2Y7_9CRYP)

HSP 1 Score: 396 bits (1017), Expect = 1.840e-128
Identity = 199/271 (73.43%), Postives = 227/271 (83.76%), Query Frame = 1
Query:    1 IGLVEELKPKFKVAWNDESNPAQGFKYLYLNEEDYEALEEGTVNAQEVV-EGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPVTDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQ 810
            IGLVEELKPKFKVAWNDE+NP  GFKYLYL+E DY AL+ GTV A +V   GGE RYAL DIIGQ+HGIGVENLRGSG+IAGETSRAY E FTLS+VTGRSVGIGAY+ RLGQR IQM +GP+ILTGFSALNKLLG+EVYTSQDQLGGPQVM PNG+SH  V NDQEGV  IL W+S+VPKT  S     P  DPV+RE++  PTK+PYDPR +  G  G DG+ +V GFFD+GS++EYL+GWGKSVVVGRAR+GGIPMGVI VETRLS++
Sbjct:  361 IGLVEELKPKFKVAWNDEANPGAGFKYLYLSEADYTALKPGTVTATKVSGPGGEIRYALDDIIGQIHGIGVENLRGSGLIAGETSRAYQETFTLSFVTGRSVGIGAYICRLGQRLIQMVDGPLILTGFSALNKLLGKEVYTSQDQLGGPQVMFPNGISHQVVANDQEGVTAILDWISFVPKTKFSPSPILPAVDPVDREIAFVPTKSPYDPRHMLAGHYGPDGA-FVSGFFDKGSFKEYLAGWGKSVVVGRARLGGIPMGVIAVETRLSDR 630          
BLAST of mRNA_Ecto-sp9_F_contig8720.16907.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HMG0_HEMAN)

HSP 1 Score: 385 bits (989), Expect = 2.680e-126
Identity = 191/272 (70.22%), Postives = 226/272 (83.09%), Query Frame = 1
Query:    1 IGLVEELKPKFKVAWNDESNPAQGFKYLYLNEEDYEALEEGTVNAQEVV-EGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPVTDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQV 813
            IGLVE+LKP FKVAWNDESNPA GFKYLYL +EDY++L+EGTV A +     GE R+AL DI+GQ+HGIGVENLRGSGMIAGETSRAYDE FTLS+VTGRSVGIGAYLVRLG+R IQM +GP+ILTG+SALNKLLG++VYTSQDQLGGPQVMHPNGVSH  V NDQEGV  +L WLS+VPK   S P      DPV+R++   P+K PYDPR +  G     G+ +V GFFD+G+++EYL+GWGKSVVVGRA++GGIPMGVI VETRLS+++
Sbjct:  171 IGLVEDLKPMFKVAWNDESNPASGFKYLYLTDEDYKSLKEGTVGATKTKGPDGEDRWALDDIVGQIHGIGVENLRGSGMIAGETSRAYDETFTLSFVTGRSVGIGAYLVRLGKRVIQMIDGPMILTGYSALNKLLGKDVYTSQDQLGGPQVMHPNGVSHEIVNNDQEGVHSMLDWLSFVPKDMNSPPPVVAQEDPVDRDIDFLPSKTPYDPRHMLAGHEDDKGN-FVSGFFDKGTFKEYLAGWGKSVVVGRAKLGGIPMGVIAVETRLSQRI 441          
BLAST of mRNA_Ecto-sp9_F_contig8720.16907.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VFI1_9STRA)

HSP 1 Score: 363 bits (931), Expect = 1.630e-122
Identity = 184/271 (67.90%), Postives = 218/271 (80.44%), Query Frame = 1
Query:    1 IGLVEELKPKFKVAWNDESNPAQGFKYLYLNEEDYEALEEGTVNAQEVVEGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPVTDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQV 813
            IGLV+ELK K  + + D  +PA+GF+YLYL++EDY AL EG V A +V EG    +AL+D+IG  HGIGVENL+GSG IAGETSRAYDE FTLSYVTGRSVGIGAYLVRLGQR IQM  GPIILTG+SALNKLLGR+VYTSQDQLGGPQ+M PNGVSHL+V +DQEGV  I++WLS+VPKT G+LP AR   DPV+R V+  PT  PYDPR +  G      +S +PGFFD+GS+QEYL GWGKSV++GR R+GGIPMG I VETRL ++V
Sbjct:   46 IGLVDELKSKINIKFVDPESPAKGFEYLYLSDEDYNALPEGAVIANKVAEG----WALSDVIGTKHGIGVENLQGSGKIAGETSRAYDEIFTLSYVTGRSVGIGAYLVRLGQRVIQMDEGPIILTGYSALNKLLGRDVYTSQDQLGGPQIMIPNGVSHLKVEDDQEGVAEIMKWLSFVPKTVGALPAARESADPVDRPVAWRPTPTPYDPRLMLSG------TSDMPGFFDKGSWQEYLDGWGKSVIIGRGRLGGIPMGAIAVETRLVDKV 306          
BLAST of mRNA_Ecto-sp9_F_contig8720.16907.1 vs.
Match: Acetyl-CoA (carboxylase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQP5_NANGC)

HSP 1 Score: 393 bits (1010), Expect = 4.700e-122
Identity = 202/272 (74.26%), Postives = 227/272 (83.46%), Query Frame = 1
Query:    1 IGLVEELKPKFKVAWNDESNPAQGFKYLYLNEEDYEALEEGTVNAQEV-VEGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPV-TDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQ 810
            IGLV++LK KF++AWND +NP+ GFKYLYL  E+YEAL+ GTVNA  V  E GEKR+AL DI+GQVHGIGVENLRGSGMIAGETSRAYDE FTLSYVTGRSVGIGAYLVRLGQRTIQM NGP+ILTG+SALNKLLGREVYTSQDQLGGPQ+M PNGVSHL VGND+EGV  I+ WLS+VPK   S P    + TD  ER+V   PTK PYDPR +  G VG DG+ +VPGFFDRGS+ E L GWGKSVV GRA++GGIPMGVI+VETRL EQ
Sbjct: 1555 IGLVDDLKGKFRIAWNDPANPSLGFKYLYLPPEEYEALKPGTVNANLVETEEGEKRWALQDIVGQVHGIGVENLRGSGMIAGETSRAYDETFTLSYVTGRSVGIGAYLVRLGQRTIQMVNGPLILTGYSALNKLLGREVYTSQDQLGGPQIMAPNGVSHLVVGNDKEGVSSIIDWLSFVPKDKFSAPPILDLPTDSPERDVEFLPTKTPYDPRHMLAGTVGPDGA-FVPGFFDRGSFIETLGGWGKSVVTGRAKLGGIPMGVISVETRLVEQ 1825          
BLAST of mRNA_Ecto-sp9_F_contig8720.16907.1 vs.
Match: Acetyl-CoA (carboxylase n=1 Tax=Nannochloropsis oculata TaxID=43925 RepID=A0A0B4L7Y6_9STRA)

HSP 1 Score: 392 bits (1006), Expect = 1.630e-121
Identity = 199/272 (73.16%), Postives = 227/272 (83.46%), Query Frame = 1
Query:    1 IGLVEELKPKFKVAWNDESNPAQGFKYLYLNEEDYEALEEGTVNAQEVV-EGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTA-GSLPVARPVTDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQ 810
            IGLV++LK KF++AWND +NP+ GFKYLYL  E+YE L+ GTVNA  V+ E GEKR+AL DIIGQVHGIGVENLRGSGMIAGETSRAYDE FTLSYVTGRSVGIGAYLVRLGQRTIQM NGP+ILTG+SALNKLLGREVYTSQDQLGGPQ+M PNGVSHL V ND+EG+  I+ WLS+VPK    S+P+    TD  ER+V   PTK PYDPR +  G VG DG+ +VPGFFDRGS+ E L GWGKSVV GRA++GGIPMG+I+VETRL EQ
Sbjct: 1553 IGLVDDLKGKFRIAWNDPANPSLGFKYLYLTPEEYEGLKPGTVNANLVLSEEGEKRWALQDIIGQVHGIGVENLRGSGMIAGETSRAYDETFTLSYVTGRSVGIGAYLVRLGQRTIQMVNGPLILTGYSALNKLLGREVYTSQDQLGGPQIMAPNGVSHLVVDNDKEGISSIIDWLSFVPKDKFSSVPIIDLPTDSPERDVEFQPTKTPYDPRHMLAGTVGPDGA-FVPGFFDRGSFIETLGGWGKSVVTGRAKLGGIPMGIISVETRLVEQ 1823          
BLAST of mRNA_Ecto-sp9_F_contig8720.16907.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJP6_9STRA)

HSP 1 Score: 384 bits (985), Expect = 4.830e-121
Identity = 191/271 (70.48%), Postives = 218/271 (80.44%), Query Frame = 1
Query:    1 IGLVEELKPKFKVAWNDESNPAQGFKYLYLNEEDYEALEEGTVNAQEVVEGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPVTDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQV 813
            IGLVEELKP   VAW D + PAQGF +LYL +EDYE LE+GTV A E    GE   AL DIIGQ HGIGVENLRGSGMIAGETSRAYDE FTLSYV+GRSVGIGAYLVRLGQRTIQM+NGP++LTGF ALNKLLGREVYTSQDQLGGPQ+MHPNGV+H    +D++GV +IL+WL YVPK   S+PV     DPV+REV   P   PYDPRD  +G   +DG+ +  GFFD+GS+QE L+GWGKSVVVGRA++GGIPMGV+ VETRL EQV
Sbjct:  705 IGLVEELKPLINVAWKDANVPAQGFDFLYLKKEDYEKLEDGTVIAHEATYNGESVMALDDIIGQGHGIGVENLRGSGMIAGETSRAYDETFTLSYVSGRSVGIGAYLVRLGQRTIQMKNGPMLLTGFGALNKLLGREVYTSQDQLGGPQIMHPNGVTHQLAEDDEDGVSKILKWLQYVPKDVNSMPVRSAQPDPVDREVGFTPPAQPYDPRDFLQGTTNADGT-FASGFFDKGSFQESLAGWGKSVVVGRAKLGGIPMGVVAVETRLMEQV 974          
BLAST of mRNA_Ecto-sp9_F_contig8720.16907.1 vs.
Match: Acetyl-CoA (carboxylase n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1ML75_MICPC)

HSP 1 Score: 388 bits (996), Expect = 3.670e-120
Identity = 195/270 (72.22%), Postives = 218/270 (80.74%), Query Frame = 1
Query:    1 IGLVEELKPKFKVAWNDESNPAQGFKYLYLNEEDYEALEEGTVNAQEVVEGGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRSVGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQVMHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPVTDPVEREVSVYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGRARIGGIPMGVINVETRLSEQ 810
            IGLVEELKP FKVAWND SNP+ GF+YLYL+ +DY A  EGTVNA EVV+ GEKR  L DIIGQ+HGIGVENLRGSGMIAGE S AY +AFTLSY+TGRSVGIGAYL RLGQR IQM NGP+ILTG+ ALNKLLGREVYTSQDQLGGPQVM PNGVSH++V +DQEGV  IL+WLSYVP    +   A P  DP  R+++  PTK PYDPR +  G   SDGS W+ GFFDRGS+ E L+ WGKSVV GRAR+GGIPMGVI VETRL EQ
Sbjct: 1569 IGLVEELKPYFKVAWNDVSNPSLGFRYLYLSPDDYAAFPEGTVNATEVVDDGEKRMQLDDIIGQIHGIGVENLRGSGMIAGEQSAAYSDAFTLSYITGRSVGIGAYLCRLGQRNIQMTNGPLILTGYLALNKLLGREVYTSQDQLGGPQVMMPNGVSHMQVEDDQEGVKAILRWLSYVPSNCFTRAPALPSADPTSRKIAFKPTKTPYDPRHMISGTESSDGS-WIGGFFDRGSWTETLADWGKSVVCGRARLGGIPMGVIAVETRLMEQ 1837          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8720.16907.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Acetyl-CoA1.290e-18398.89carboxylase, partial n=1 Tax=Ectocarpus siliculosu... [more]
Acetyl-CoA7.380e-17498.52carboxylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
Acetyl-CoA1.630e-13880.00carboxylase n=1 Tax=Tribonema minus TaxID=303371 R... [more]
Hypothetical1.840e-12873.43protein n=1 Tax=Cryptomonas curvata TaxID=233186 R... [more]
Hypothetical2.680e-12670.22protein n=1 Tax=Hemiselmis andersenii TaxID=464988... [more]
Hypothetical1.630e-12267.90protein n=1 Tax=Amphiprora paludosa TaxID=265537 R... [more]
Acetyl-CoA4.700e-12274.26carboxylase n=1 Tax=Nannochloropsis gaditana (stra... [more]
Acetyl-CoA1.630e-12173.16carboxylase n=1 Tax=Nannochloropsis oculata TaxID=... [more]
Hypothetical4.830e-12170.48protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Acetyl-CoA3.670e-12072.22carboxylase n=2 Tax=Micromonas pusilla TaxID=38833... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8720contigEcto-sp9_F_contig8720:100..5225 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score387.9
Seed ortholog evalue3.9e-105
Seed eggNOG ortholog38833.XP_003056126.1
KEGG rclassRC00040,RC00253,RC00367
KEGG koko:K01946,ko:K11262
KEGG ReactionR00742,R04385,R04386
KEGG Pathwayko00061,ko00254,ko00620,ko00640,ko01100,ko01110,ko01212,ko04152,ko04910,ko04920,ko04922,ko04931,map00061,map00254,map00620,map00640,map01100,map01110,map01212,map04152,map04910,map04920,map04922,map04931
KEGG ModuleM00082
EggNOG free text desc.acetyl-coa carboxylase
EggNOG OGs37HYK@33090,COG0439@1,KOG0368@2759
EC2.1.3.15,6.3.4.14,6.4.1.2
COG Functional cat.I
Best tax levelViridiplantae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAcetyl-CoA carboxylase, partial
Ec32 orthologEc-19_003230.1
Exons7
Model size813
Cds size813
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930918.789424-CDS-Ecto-sp9_F_contig8720:99..1351622930918.789424-CDS-Ecto-sp9_F_contig8720:99..135Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 100..135 +
1692278948.7498395-CDS-Ecto-sp9_F_contig8720:99..1351692278948.7498395-CDS-Ecto-sp9_F_contig8720:99..135Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 100..135 +
1622930918.8081882-CDS-Ecto-sp9_F_contig8720:679..8351622930918.8081882-CDS-Ecto-sp9_F_contig8720:679..835Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 680..835 +
1692278948.762961-CDS-Ecto-sp9_F_contig8720:679..8351692278948.762961-CDS-Ecto-sp9_F_contig8720:679..835Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 680..835 +
1622930918.82014-CDS-Ecto-sp9_F_contig8720:1317..14781622930918.82014-CDS-Ecto-sp9_F_contig8720:1317..1478Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 1318..1478 +
1692278948.7737124-CDS-Ecto-sp9_F_contig8720:1317..14781692278948.7737124-CDS-Ecto-sp9_F_contig8720:1317..1478Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 1318..1478 +
1622930918.836142-CDS-Ecto-sp9_F_contig8720:1883..19771622930918.836142-CDS-Ecto-sp9_F_contig8720:1883..1977Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 1884..1977 +
1692278948.7844925-CDS-Ecto-sp9_F_contig8720:1883..19771692278948.7844925-CDS-Ecto-sp9_F_contig8720:1883..1977Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 1884..1977 +
1622930918.8557637-CDS-Ecto-sp9_F_contig8720:2555..27021622930918.8557637-CDS-Ecto-sp9_F_contig8720:2555..2702Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 2556..2702 +
1692278948.7977383-CDS-Ecto-sp9_F_contig8720:2555..27021692278948.7977383-CDS-Ecto-sp9_F_contig8720:2555..2702Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 2556..2702 +
1622930919.3989172-CDS-Ecto-sp9_F_contig8720:4307..43641622930919.3989172-CDS-Ecto-sp9_F_contig8720:4307..4364Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 4308..4364 +
1692278948.8085663-CDS-Ecto-sp9_F_contig8720:4307..43641692278948.8085663-CDS-Ecto-sp9_F_contig8720:4307..4364Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 4308..4364 +
1622930919.520061-CDS-Ecto-sp9_F_contig8720:5063..52251622930919.520061-CDS-Ecto-sp9_F_contig8720:5063..5225Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 5064..5225 +
1692278948.8180406-CDS-Ecto-sp9_F_contig8720:5063..52251692278948.8180406-CDS-Ecto-sp9_F_contig8720:5063..5225Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8720 5064..5225 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8720.16907.1prot_Ecto-sp9_F_contig8720.16907.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig8720 100..5225 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig8720.16907.1

>prot_Ecto-sp9_F_contig8720.16907.1 ID=prot_Ecto-sp9_F_contig8720.16907.1|Name=mRNA_Ecto-sp9_F_contig8720.16907.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=271bp
IGLVEELKPKFKVAWNDESNPAQGFKYLYLNEEDYEALEEGTVNAQEVVE
GGEKRYALTDIIGQVHGIGVENLRGSGMIAGETSRAYDEAFTLSYVTGRS
VGIGAYLVRLGQRTIQMRNGPIILTGFSALNKLLGREVYTSQDQLGGPQV
MHPNGVSHLEVGNDQEGVDRILQWLSYVPKTAGSLPVARPVTDPVEREVS
VYPTKAPYDPRDLCRGKVGSDGSSWVPGFFDRGSYQEYLSGWGKSVVVGR
ARIGGIPMGVINVETRLSEQV
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mRNA from alignment at Ecto-sp9_F_contig8720:100..5225+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig8720.16907.1 ID=mRNA_Ecto-sp9_F_contig8720.16907.1|Name=mRNA_Ecto-sp9_F_contig8720.16907.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=5126bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8720:100..5225+ (Ectocarpus species9 EcSCA_722f female)
ATCGGCCTCGTGGAGGAGCTCAAGCCTAAGTTTAAGGTACAAGTTTTTTT TTTTTTGTGCTACTGCTGTTTCGTGTGTTGTTTGTCTGGGAGATTGGTGG TGTCATCGCATCATGCGTCTCCAAGCCAACAGGTCATCAGCTGTCGTTCC TTTTCCTTTTTGTGGTTCGTACTGTTGTTTCGTGTTTTGTTGATGGGTAT GTGGCTCTCCAACCCAAGAAGGCGTTTTGAAGGTCACTCGTTTATTATTT GTCTCTTGCTGTTTCGTGTGTCATTTTTCAAAGATTGGGTTATGTTTGCT TGGAACAACACATCGGGTGGGTTAAGTTGTTGGAGAAAGACGATGGACGT TTTGAGGTCTGCGGCGACGGCGACGGCAATAACTCCCCACGCACAACACC AAGCGCTTCTTATTTCAAGCTCTGGGCGTTTGGTCTTCTCTTTCAACCTT TGTTCGCGTATAATTCGAACACTAAACTCTTCTTCAAGAACGCGCCAACA AATCATCAATGCCCTTGGCGGTCTCTCTCTACCTTCGCCCCCCCCCCCCG CATTTGTGTCCTGCGTCATTCATTGAACAGGTGGCATGGAATGACGAGTC GAACCCCGCCCAGGGCTTCAAGTACCTGTACCTCAACGAGGAGGACTACG AGGCCCTCGAGGAGGGCACCGTTAACGCGCAGGAGGTGGTGGAGGGGGGA GAGAAGCGTTACGCGCTCACCGACATCATCGGACAGGTGCGTTTGTGTTC GCTTGATGGTAGGTGTGAATTAAAGCAAGAGCACGGTCGACTTGCGGGTT TTGCTTCGTACGTTGGTCGGTTGAACTTGTTGTTCTGTTGGCTCATGTAT TGTACGTGCATCGGAGTATTGTCAATGACGAGTGTGGGCGTAGATGATTT GGACGCGCAGTCCTTCTCTCTCGTTGCTGTATATGTGGGCACCTCTGTCG TGTAGAGCATGGTTTACCCTGCTTTGGAGCGGCTACAGTACTTTGACCAC CATCGCAAGACGGGCAATGGTCGCCGATGCAGCTGTGTGTGTGTGTGTCT GTTTATTAGCATCGACCGCGCTAACCGGGTGACCAATGAAAAGACGTCAG TCTCAGTGCGGTTGAAAACACAAAACACTTGTAAATGTGTGTGTGTGTGT CCCATGGCCGTACCTAGCCTCACGCTTGCGGGGCCCCTTTTTTGCTTGTG TTGTTGCTCTTATCGAAGGTGCACGGCATCGGAGTGGAGAACCTTCGCGG TTCGGGCATGATCGCCGGGGAAACGTCTCGTGCCTACGACGAGGCCTTCA CGCTGTCGTACGTCACCGGGCGCTCCGTGGGCATCGGCGCTTACCTCGTC AGGCTTGGCCAGAGGACGATCCAGATGAGGTGTGTGTGAGAGAGAGACAG AGTGGGGGGGAAAAAGAGACACAGACAGACAGACAAACAAACAAACAAAT CGACCGACAGAGACAAAGACAAAGACAAAGACAAAACACACACAGAGTAT TATTAAGACAGTGAGAGAGAGAGGGGGAAAGTGTTGACACGGAGAGAGGT AGTAATTGAGGTAGTGAGAGAGATGGAGTGTTGAGGCAGTTCACAAGGAG AGATAGTAGTATGGAGGCAGGTTATAGCGCGACGAGTGTCCCGCTCAAGC CGTCTTGCTTCATGACAACAACGTCGTGCCTGCTCGTCGTCGGCCTCCTG TCTTTGTAAGTTTTGGCACTTTCACTCACGATTCATTTCTTTTTTCTTAA ACGTAAATTTTTTTCTTTCGCTTTGTTTTTGCAGGAACGGCCCGATCATC CTGACCGGTTTCTCCGCCCTGAACAAGCTCCTCGGGAGGGAGGTGTACAC CTCGCAGGACCAGCTTGGAGGACCCCAGGTGAGATGACGATGGCCTGCTA TATAACACGGCAACATAGTGGTGCTGTTGGGGTTGGGCTACGCCATGTTC CACGCTTCGTTGTAGTTGTCGCAACCTTTGTGAAGGGCCAAGACACAGTC GTTGACTCGCCTTCTTCACTCGCCGTGCGGTTGGGGGAGGTTTCACCTCA ACATGCTGCAGTGCTCGATTACAGCGGGGGGGTGTCAATAACGCCGATTG ATTCGCGCCGGTGAATTTGCTGGGCACAGATTGAACACCTGCAGTAGTTT TGTACACAGGGAATAGCGCCGGTTCCTGTGAATAGCGCCGCTCGACGCGC CGGGCACATACCGGCCCCGCCCTCTCAGGGAGGAAGGAGTAAGAGCATCA TCCGCATACCAGAAAATGCATACCAAGGCAACACACGAGACAGCTTGTTG TGTGTGTGTGTTCTTTTTTTAGCCGTTGGACTTGTCCTCCAAAAACCCAC AAAACATCGGTCCTCTAAAAAACCCAAGAAATATAGAATTGAATAAAAAA CAGCACCCAATTATATATTTCTGCGTTTTTTTTTTTTCTGCGGCGACGCG ACGCAGGTGATGCACCCGAACGGCGTGAGCCACCTGGAGGTTGGCAACGA CCAGGAGGGCGTGGACAGAATCCTGCAGTGGCTGTCGTACGTGCCCAAGA CCGCGGGCTCACTGCCGGTCGCCCGGCCCGTCACTGACCCCGTCGAGCGC GAGGTGGGTGCCTACCTATCTACATCACGGGGGCCCCCACTCCGTGGTTG CCTGTTGGTTGGTGCTAGGGTGACTTGTGCTATAGTATTGTTGATGTGGG TGTATGCATAGCACCCGGGAGCGGTATGGACGTGGCTGACAATCGCCCGC CCCGTGACTGATCCCGTCGAGCGTGAGGCGGGTGAGCTACCTACGCCTCT CCGTCGTTGTCGGCTGGTTCGTTGGGTGCTGGGGTTGGCTTGCGTTGTGG TAGCACGAAAGCGGTAAGACGGGCAGGCAGTTACTGCCTTCCCCCGTCTT GCCGCCTTCGTGATCAAACGACGGTCGGTTCGTGCAACCTTCGTGTAGGC AGCGATTCCGGATCACTGCCACCATGCCCAGCGACCCGGAAGCGCGGCGC ACACGAAGGATGTTCAAACCGACCGTCGTTTGATCACGAAGGCGGCAAGA CGGGGAGGCAAAGTATGGCATGGCGGTGGTATCCCGATGACACGCTAACA ACCAAGTCGAAAATCGACAGTCCGGCCAAAACAAACGAAAAAACAAAATT GTACCGAAAAAGCCGAAATTTTTGGTACTTTTGTACCATTGTGACATGGG TGTATGCACCCGTCGGCAGCAGTATGTGGCTGGGTGTTACCTCCGTTGCG GTCTGCGTCTTTTTGTGGCACTCTTCTCAAGATAACAATCCCTTGCTTCC TGGTGTAATGTTCACCTGGTATTTATAAGAACGCTGCTGGATCGATGACA GCTGTGGTATTCTATAATAGTCGTCAGGAGCACTTTTTTTTTTTGTTTTT TTCGAGGTGCTGCCGTGATAAAAAAATAACAAAACAGTAGTATTCAAACC AATGAGCAAGAAACAACAAAGCAAGCATGGGTGGGGGCGCTGCACCAACC GGCACCGAATTTATCGTTTTTTGCCGGGTGAAAATGTTTCGCCTTTTTTA CCCGGTCTACTTTCTGTCTCGGAACAACCGAAGAAGAAGAAGGCTTGCGA GAACGAACAACGCCGATAGTTCTGGTGTCCCGCTTCTCCCTCCCTCTTCG GGGGGGGGGGGTAGACGTGCGGTGTTGCGCCTTTGATCCGGCGTGACATG AACATTTAGCTGTGCGCTAAAAAAAAACGTAGATCTACGTTCCGAATTCT TCCGTGCACGTGAAAATTCAGGTCGTTCGGTTCACAGCACCAACATTTTT CCCTCTGATCCGCGAGCAGCCTAGGCAATTTTTCTAAGTTCGCTCTCTGT TATCACATACTTCCGTGCAAGTATTACAGCGAAAGATTCAACGACGTTTT GCGCCCCGTGCTGCACCGCTGTTTTATCCGGTTTGGTGGGTAAAAGTGTT TTTTTACCATCACCTTACACCATTTGATATATTAGAGCGTCGGATTCGCT TCTGGGCAGCAACTCTTATCAGGTGTTGCGCCGATCAACCTTGCTTGCCG TAGCGTTTTGGAACTCGGCGTACGTCCTGCCAAGAAATGGATTCACCCCC TCAACCTTTCTCGAACGCTCTGCCCGCCCTTTCCCTCGTTCTTGTCTGCG TGCCCCTCCCCGACGCGCTGGTTTTGCACCCGGGGGGCGTTTTTTTTTAT GGTGTCAGGTTTCGGTTTACCCGACGAAGGCGCCGTACGACCCGCGTGAC CTGTGCCGCGGAAAGGTGTGTACCGTGTGGTATATACATGGCATGGTACA TGCCACATGGCGCGGTACATGCCACATGGCACGGTACATGCCATGCTGTT GGGTGGCTTTCGAACTGCTTTTGCTGTTGGGTTGGGCCACACGTTGTTGC GTGGCTTCTTATTTTTTGGGGCTTTTCTTCTCCCTTGAGGGTATTTAGCC ATGGTACCAACACTGCTGTGTGCACTTCTAGCGTTCAATGTACCTTTTTG AGGTTGGCAGCGAGCTCGTGTTGGTCAATTCCATGGATACCGATCGTTGT GCACGCGTCTGTTGTTGTAAAGTTTTCATGTTAGCAACGAGGTTGGCAGC GACACTCGTGTTAAGTCAAATGCCGTGGCACCTATCGCTGTGTGCTTTGG TCTGTTGTTGTACCTTTTGGCAGCGACGCTCTTGTTACATGGGTGTTGTA CCTTTTGGCAGCGACGCTCTTGTTACATGGGTACCTATCGCTGTGTGCTA TTTTTTTCTGTACCTCTTTTATTAGGTAGGCAGCGACGCGACGCTCTTCT TACACATTCAAATATCGTGTTGGCTACCGCCGTTCCCTCTCTCTTTCTAC CTTTTTTCAGGTTAGCAGCGACGGTTCCATGGGTACACGTACCCTTTTTT GTGCTCGTGTTAACTCGTACCATGATACATACCGCCGTGTGCTCTTTCTT TCCACATTTTCCAGGTCGGCAGCGACGGTTCTAGCTGGGTGCCCGGGTTC TTCGACCGCGGTTCCTACCAGGAGTACCTGAGCGGGTGGGGAAAGTCCGT CGTGGTGGGGAGGGCGAGGATCGGCGGTATCCCCATGGGCGTGATCAACG TCGAGACACGCCTCAGCGAGCAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig8720:100..5225+

>mRNA_Ecto-sp9_F_contig8720.16907.1 ID=mRNA_Ecto-sp9_F_contig8720.16907.1|Name=mRNA_Ecto-sp9_F_contig8720.16907.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1626bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8720:100..5225+ (Ectocarpus species9 EcSCA_722f female)
ATCGGCCTCGTGGAGGAGCTCAAGCCTAAGTTTAAGATCGGCCTCGTGGA
GGAGCTCAAGCCTAAGTTTAAGGTGGCATGGAATGACGAGTCGAACCCCG
CCCAGGGCTTCAAGTACCTGTACCTCAACGAGGAGGACTACGAGGCCCTC
GAGGAGGGCACCGTTAACGCGCAGGAGGTGGTGGAGGGGGGAGAGAAGCG
TTACGCGCTCACCGACATCATCGGACAGGTGGCATGGAATGACGAGTCGA
ACCCCGCCCAGGGCTTCAAGTACCTGTACCTCAACGAGGAGGACTACGAG
GCCCTCGAGGAGGGCACCGTTAACGCGCAGGAGGTGGTGGAGGGGGGAGA
GAAGCGTTACGCGCTCACCGACATCATCGGACAGGTGCACGGCATCGGAG
TGGAGAACCTTCGCGGTTCGGGCATGATCGCCGGGGAAACGTCTCGTGCC
TACGACGAGGCCTTCACGCTGTCGTACGTCACCGGGCGCTCCGTGGGCAT
CGGCGCTTACCTCGTCAGGCTTGGCCAGAGGACGATCCAGATGAGGTGCA
CGGCATCGGAGTGGAGAACCTTCGCGGTTCGGGCATGATCGCCGGGGAAA
CGTCTCGTGCCTACGACGAGGCCTTCACGCTGTCGTACGTCACCGGGCGC
TCCGTGGGCATCGGCGCTTACCTCGTCAGGCTTGGCCAGAGGACGATCCA
GATGAGGAACGGCCCGATCATCCTGACCGGTTTCTCCGCCCTGAACAAGC
TCCTCGGGAGGGAGGTGTACACCTCGCAGGACCAGCTTGGAGGACCCCAG
GAACGGCCCGATCATCCTGACCGGTTTCTCCGCCCTGAACAAGCTCCTCG
GGAGGGAGGTGTACACCTCGCAGGACCAGCTTGGAGGACCCCAGGTGATG
CACCCGAACGGCGTGAGCCACCTGGAGGTTGGCAACGACCAGGAGGGCGT
GGACAGAATCCTGCAGTGGCTGTCGTACGTGCCCAAGACCGCGGGCTCAC
TGCCGGTCGCCCGGCCCGTCACTGACCCCGTCGAGCGCGAGGTGATGCAC
CCGAACGGCGTGAGCCACCTGGAGGTTGGCAACGACCAGGAGGGCGTGGA
CAGAATCCTGCAGTGGCTGTCGTACGTGCCCAAGACCGCGGGCTCACTGC
CGGTCGCCCGGCCCGTCACTGACCCCGTCGAGCGCGAGGTTTCGGTTTAC
CCGACGAAGGCGCCGTACGACCCGCGTGACCTGTGCCGCGGAAAGGTTTC
GGTTTACCCGACGAAGGCGCCGTACGACCCGCGTGACCTGTGCCGCGGAA
AGGTCGGCAGCGACGGTTCTAGCTGGGTGCCCGGGTTCTTCGACCGCGGT
TCCTACCAGGAGTACCTGAGCGGGTGGGGAAAGTCCGTCGTGGTGGGGAG
GGCGAGGATCGGCGGTATCCCCATGGGCGTGATCAACGTCGAGACACGCC
TCAGCGAGCAGGTGGTCGGCAGCGACGGTTCTAGCTGGGTGCCCGGGTTC
TTCGACCGCGGTTCCTACCAGGAGTACCTGAGCGGGTGGGGAAAGTCCGT
CGTGGTGGGGAGGGCGAGGATCGGCGGTATCCCCATGGGCGTGATCAACG
TCGAGACACGCCTCAGCGAGCAGGTG
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