mRNA_Ecto-sp9_F_contig8719.16901.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig8719.16901.1 vs.
Match: Lipase_3 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF5_ECTSI) HSP 1 Score: 342 bits (877), Expect = 9.880e-109 Identity = 171/182 (93.96%), Postives = 172/182 (94.51%), Query Frame = 1
Query: 1 QIWVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQAHYYRPLLEYVRAIEGRNVVLTGHSLGGGLARIVAALEKATSICFSPPGIAQSYRKFSVGAGALDRALLHQMSVSIIPEYDFVPMIDTQARFRTSDDLVGLIQLISCDTAGKALQLSCHMLEGTICDIIRHCGDDR 546
+IWVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQAHYYRPLLEYVRAIEGRNVVLTGHSLGGGLARIV ALEKATSICFSPPGIAQSYRKFSVGAGALDRALLHQMSVSIIPEYDFVPMIDTQ VGLIQLISCDTAGKALQLSCHMLEGTICDIIRHCGDDR
Sbjct: 771 KIWVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQAHYYRPLLEYVRAIEGRNVVLTGHSLGGGLARIVGALEKATSICFSPPGIAQSYRKFSVGAGALDRALLHQMSVSIIPEYDFVPMIDTQ---------VGLIQLISCDTAGKALQLSCHMLEGTICDIIRHCGDDR 943
BLAST of mRNA_Ecto-sp9_F_contig8719.16901.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTY2_HETAK) HSP 1 Score: 194 bits (493), Expect = 4.030e-58 Identity = 95/184 (51.63%), Postives = 127/184 (69.02%), Query Frame = 1
Query: 1 QIWVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQAHYYRPLLEYVRAIEGRNVVLTGHSLGGGLARIVAALEKATSICFSPPGIAQSYRKF--SVGAGALDRALLHQMSVSIIPEYDFVPMIDTQARFRTSDDLVGLIQLISCDTAGKALQLSCHMLEGTICDIIRHCGDDR 546
+++ EP+V LS VFPT+R+W D+T+S +++WLHET LFGL ++ YY + EYVR+++GR VVLTGHSLGGGLARI ALE A S+ FSPPG+ Q++RKF G G L R L+ SV+++PE D V +DTQ VG IQ I C + AL +CHMLEGT+C+++ HCGD R
Sbjct: 119 KLYTEPVVFMILSSVFPTVRMWSDNTASYMVDWLHETQVLFGLLKKKEYYHQVTEYVRSLKGRQVVLTGHSLGGGLARIAGALEGAPSVTFSPPGLGQNFRKFRPQTGPGGLTRGDLYHGSVAVVPENDPVARVDTQ---------VGNIQHIMCKSESLALTNACHMLEGTLCELLAHCGDHR 293
BLAST of mRNA_Ecto-sp9_F_contig8719.16901.1 vs.
Match: Lipase_3 (domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GSJ1_9STRA) HSP 1 Score: 190 bits (482), Expect = 8.050e-55 Identity = 94/186 (50.54%), Postives = 124/186 (66.67%), Query Frame = 1
Query: 1 QIWVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQAHYYRPLLEYVRAIEGRNVVLTGHSLGGGLARIVAALEKATSICFSPPGIAQSYRKFSVGAGA----LDRALLHQMSVSIIPEYDFVPMIDTQARFRTSDDLVGLIQLISCDTAGKALQLSCHMLEGTICDIIRHCGDDR 546
+++ EP+V LS +FPTIRIWPD T S +IE E + LFGLQ ++ YY LL+YV ++ R VVLTGHS+GGG+AR+V ++ TS+ FSPPG QSY K G +DRA LH S +++PEYD + MID QA G+IQ ISCDT ++QLSCHMLEGT+C+++ HCG R
Sbjct: 284 KMFFEPVVFSVLSSIFPTIRIWPDVTFSTLIELYSEMIGLFGLQHESWYYHELLDYVTSLSDRKVVLTGHSMGGGIARLVGSIVGTTSVTFSPPGFVQSYSKLVHHIGGTSMKVDRASLHHRSFAVVPEYDPITMIDAQA---------GMIQKISCDTPHLSMQLSCHMLEGTLCNLVEHCGCAR 460
BLAST of mRNA_Ecto-sp9_F_contig8719.16901.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCC7_PYTOL) HSP 1 Score: 196 bits (497), Expect = 8.800e-55 Identity = 97/186 (52.15%), Postives = 131/186 (70.43%), Query Frame = 1
Query: 1 QIWVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQAHYYRPLLEYVRAIEGRNVVLTGHSLGGGLARIVAALEKATSICFSPPGIAQSYRKF--SVGAGA--LDRALLHQMSVSIIPEYDFVPMIDTQARFRTSDDLVGLIQLISCDTAGKALQLSCHMLEGTICDIIRHCGDDR 546
++++EP++ LS+VFPTIRIWPD T S +IE E + LFGLQ + YY LLEYV +I+ R+VVLTGHS+GGG+AR+V ++ TS+ FSPPG QSY K +G A +DRA LH SV+++PEYD + +ID QA G+IQ ISC+T ++QLSCHMLEGT+C+++ HCGD R
Sbjct: 670 KMFIEPVIFTILSLVFPTIRIWPDVTFSTLIELYGELIALFGLQHEFWYYHELLEYVASIQDRDVVLTGHSMGGGIARLVGSIVGKTSVTFSPPGFVQSYSKLVHDIGGKATKVDRANLHHRSVTVVPEYDPITLIDAQA---------GMIQKISCNTPHLSMQLSCHMLEGTLCNLLEHCGDAR 846
BLAST of mRNA_Ecto-sp9_F_contig8719.16901.1 vs.
Match: Lipase_3 (domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ACD0_9STRA) HSP 1 Score: 182 bits (462), Expect = 1.580e-54 Identity = 88/184 (47.83%), Postives = 121/184 (65.76%), Query Frame = 1
Query: 7 WVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQAHYYRPLLEYVRAIEGRNVVLTGHSLGGGLARIVAALEKATSICFSPPGIAQSYRKFSVGAGA----LDRALLHQMSVSIIPEYDFVPMIDTQARFRTSDDLVGLIQLISCDTAGKALQLSCHMLEGTICDIIRHCGDDR 546
+ EP++ LS +FPTIR+WPD T S +IE HE +FGL + YY LL+YV++I RNV+LTGHSLGG +AR+V ++ S+ FSPPG Q+Y K +DR+ LH ++PEYD V MIDTQ+ GLIQ I+CDT ++QLSCHM++GT+C++++HCGDDR
Sbjct: 2 YAEPVIFVILSSIFPTIRMWPDVTFSTLIELYHEMATMFGLTHEYWYYHELLQYVKSIHDRNVILTGHSLGGAIARVVGSVLGKPSVSFSPPGSGQTYSKLVHDIAGQDMQVDRSRLHHECTCVLPEYDPVTMIDTQS---------GLIQRITCDTPHLSMQLSCHMIQGTLCNLLQHCGDDR 176
BLAST of mRNA_Ecto-sp9_F_contig8719.16901.1 vs.
Match: Lipase_3 (domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTE9_9STRA) HSP 1 Score: 187 bits (476), Expect = 3.090e-54 Identity = 93/186 (50.00%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 1 QIWVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQAHYYRPLLEYVRAIEGRNVVLTGHSLGGGLARIVAALEKATSICFSPPGIAQSYRKFSVGAGA----LDRALLHQMSVSIIPEYDFVPMIDTQARFRTSDDLVGLIQLISCDTAGKALQLSCHMLEGTICDIIRHCGDDR 546
+++ EP+V LS +FPTIRIWPD T S +IE E + LFGLQ ++ YY LL+YV +++ R VVLTGHS+GGG+AR+V ++ S+ FSPPG QSY K G +DRA LH S ++IPEYD + MID QA G+ Q ISCDT ++QLSCHMLEGT+C+++ HCG R
Sbjct: 196 KMFFEPVVFAVLSSIFPTIRIWPDVTFSTLIELYSELIGLFGLQHESWYYHELLDYVTSLKDRKVVLTGHSMGGGIARLVGSIVGTPSVTFSPPGFVQSYSKLIHHIGGTSMKVDRATLHHHSFAVIPEYDPITMIDAQA---------GMTQKISCDTPHLSMQLSCHMLEGTLCNLVEHCGSPR 372
BLAST of mRNA_Ecto-sp9_F_contig8719.16901.1 vs.
Match: Lipase_3 (domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VSC6_9STRA) HSP 1 Score: 194 bits (494), Expect = 3.200e-54 Identity = 97/186 (52.15%), Postives = 127/186 (68.28%), Query Frame = 1
Query: 1 QIWVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQAHYYRPLLEYVRAIEGRNVVLTGHSLGGGLARIVAALEKATSICFSPPGIAQSYRKFSVGAGA----LDRALLHQMSVSIIPEYDFVPMIDTQARFRTSDDLVGLIQLISCDTAGKALQLSCHMLEGTICDIIRHCGDDR 546
+++ EP+V LS VFPTIRIWPD T S +IE E + LFGLQ ++ YY+ LL+YV ++ R VVLTGHS+GGG+AR+V ++ TS+ FSPPGI QSY K G +DRA LH +V+++PEYD + MID QA G+IQ ISCDT ++QLSCHMLEGTIC+++ HCG R
Sbjct: 687 KMFFEPVVFSVLSSVFPTIRIWPDVTFSTLIELYSEMIGLFGLQHESWYYQELLDYVTSLTDRKVVLTGHSMGGGIARLVGSIVGTTSVTFSPPGIVQSYSKLVHHIGGTSMKVDRASLHHRNVAVVPEYDPITMIDAQA---------GMIQKISCDTPHLSMQLSCHMLEGTICNLVEHCGSAR 863
BLAST of mRNA_Ecto-sp9_F_contig8719.16901.1 vs.
Match: Lipase_3 (domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFA1_9STRA) HSP 1 Score: 187 bits (476), Expect = 1.480e-53 Identity = 93/186 (50.00%), Postives = 123/186 (66.13%), Query Frame = 1
Query: 1 QIWVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQAHYYRPLLEYVRAIEGRNVVLTGHSLGGGLARIVAALEKATSICFSPPGIAQSYRKFSVGAGA----LDRALLHQMSVSIIPEYDFVPMIDTQARFRTSDDLVGLIQLISCDTAGKALQLSCHMLEGTICDIIRHCGDDR 546
+++ EP+V LS +FPTIRIWPD T S +IE E + LFGLQ ++ YY LL+YV +++ R VVLTGHS+GGG+AR+V ++ S+ FSPPG QSY K G +DRA LH S ++IPEYD + MID QA G+ Q ISCDT ++QLSCHMLEGT+C+++ HCG R
Sbjct: 343 KMFFEPVVFAVLSSIFPTIRIWPDVTFSTLIELYSELIGLFGLQHESWYYHELLDYVTSLKDRKVVLTGHSMGGGIARLVGSIVGTPSVTFSPPGFVQSYSKLIHHIGGTSMKVDRATLHHHSFAVIPEYDPITMIDAQA---------GMTQKISCDTPHLSMQLSCHMLEGTLCNLVEHCGSPR 519
BLAST of mRNA_Ecto-sp9_F_contig8719.16901.1 vs.
Match: Lipase_3 (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLR8_GLOUD) HSP 1 Score: 192 bits (487), Expect = 1.520e-53 Identity = 96/184 (52.17%), Postives = 127/184 (69.02%), Query Frame = 1
Query: 1 QIWVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQAHYYRPLLEYVRAIEGRNVVLTGHSLGGGLARIVAALEKATSICFSPPGIAQSYRKFSVGAGA----LDRALLHQMSVSIIPEYDFVPMIDTQARFRTSDDLVGLIQLISCDTAGKALQLSCHMLEGTICDIIRHCGD 540
+++ EP+V LS +FPTIRIWPD T S +IE E + L GLQ ++ YY LLEYV +I+ R+V+LTGHS+GGG+AR+V ++ + SI FSPPG QSY K G ++RA LH +SV+++PEYD V MID QA GLIQ ISCDT ++QLSCHMLEGT+C+++ HCGD
Sbjct: 599 KMFFEPVVFAILSAIFPTIRIWPDVTFSTLIELYSELIALCGLQHESWYYHELLEYVNSIQDRDVLLTGHSMGGGIARLVGSIVEKQSITFSPPGFVQSYSKLVHDIGGTTIKVNRANLHHLSVAVVPEYDPVTMIDAQA---------GLIQKISCDTPHLSMQLSCHMLEGTVCNLLEHCGD 773
BLAST of mRNA_Ecto-sp9_F_contig8719.16901.1 vs.
Match: Transmembrane (protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VYR6_9STRA) HSP 1 Score: 191 bits (484), Expect = 4.050e-53 Identity = 92/186 (49.46%), Postives = 127/186 (68.28%), Query Frame = 1
Query: 1 QIWVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQAHYYRPLLEYVRAIEGRNVVLTGHSLGGGLARIVAALEKATSICFSPPGIAQSYRKFSVGAGA----LDRALLHQMSVSIIPEYDFVPMIDTQARFRTSDDLVGLIQLISCDTAGKALQLSCHMLEGTICDIIRHCGDDR 546
+++ EP++ LS +FPTIRIWPD T S +IE HE + LFGL+ YY L+EY +I+ RNV+LTGHS+GG +ARIVA++ K S+ FSPPG+ QSY K G ++R+ LHQ ++++IPEYD + +ID QA GLIQ ISC T ++QLSCHMLEGT+C+++ HCGD +
Sbjct: 615 KMFFEPVIFNILSTIFPTIRIWPDVTFSTLIELYHELISLFGLEHDFWYYHELVEYTNSIKDRNVILTGHSMGGAIARIVASILKKQSVTFSPPGLIQSYSKLVHTFGGQKYKVERSKLHQYNIAVIPEYDPITLIDVQA---------GLIQKISCATPHLSMQLSCHMLEGTLCNLLEHCGDHK 791 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8719.16901.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig8719.16901.1 >prot_Ecto-sp9_F_contig8719.16901.1 ID=prot_Ecto-sp9_F_contig8719.16901.1|Name=mRNA_Ecto-sp9_F_contig8719.16901.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=183bp QIWVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQAHYYback to top mRNA from alignment at Ecto-sp9_F_contig8719:59..1945- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig8719.16901.1 ID=mRNA_Ecto-sp9_F_contig8719.16901.1|Name=mRNA_Ecto-sp9_F_contig8719.16901.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1887bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8719:59..1945- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig8719:59..1945- >mRNA_Ecto-sp9_F_contig8719.16901.1 ID=mRNA_Ecto-sp9_F_contig8719.16901.1|Name=mRNA_Ecto-sp9_F_contig8719.16901.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1098bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8719:59..1945- (Ectocarpus species9 EcSCA_722f female)back to top |