mRNA_Ecto-sp9_F_contig8715.16897.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig8715.16897.1
Unique NamemRNA_Ecto-sp9_F_contig8715.16897.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8715.16897.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD86_ECTSI)

HSP 1 Score: 656 bits (1692), Expect = 4.410e-232
Identity = 353/362 (97.51%), Postives = 357/362 (98.62%), Query Frame = 1 
Query:    1 QVMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQGRFATASSAAGPQPVINMVTGEGFLNFDSEAGVNVSNSSPKPSLPGFGSXXXXXXXXXXXXQGSPQPPASMSSSFSVAQQHPQAMLMTPAAATTPAALHKGAVPTRAAMSAISAADAGKKRVLSDRTAYVPSAGVPGVGASAGGGWSCSGSIRESEGGVSPAIGQSKEEDMRKADWLGRRSRRAHQRMLQEARAL 1086
            QVMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLS CILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQGRFA ASSAAGPQPVINMVTGEGFLNFDSEAGVNVS +SPKPSLPGFGSXXXXXXXXXXXXQGSPQPPASMSSSFSVAQQHPQAMLMTPAA+TTPAALHKGAVPTRAAMSAISAADAGKKRVLSDRTAYVPSAGVPGVGASAGGGWSCSGS+RESEGGVSPA+GQSKEEDM KADWLGRRSRR HQRMLQEARAL
Sbjct:  303 QVMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSRCILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQGRFAAASSAAGPQPVINMVTGEGFLNFDSEAGVNVSTASPKPSLPGFGSXXXXXXXXXXXXQGSPQPPASMSSSFSVAQQHPQAMLMTPAASTTPAALHKGAVPTRAAMSAISAADAGKKRVLSDRTAYVPSAGVPGVGASAGGGWSCSGSVRESEGGVSPAMGQSKEEDMGKADWLGRRSRRTHQRMLQEARAL 664
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BLAST of mRNA_Ecto-sp9_F_contig8715.16897.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD81_ECTSI)

HSP 1 Score: 605 bits (1561), Expect = 2.170e-212
Identity = 312/332 (93.98%), Postives = 316/332 (95.18%), Query Frame = 1 
Query:    1 QVMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQGRFATASSAAGPQPVINMVTGEGFLNFDSEAGVNVSNSSPKPSLPGFGSXXXXXXXXXXXXQGSPQPPASMSSSFSVAQQHPQAMLMTPAAATTPAALHKGAVPTRAAMSAISAADAGKKRVLSDRTAYVPSAGVPGVGASAGGGWSCSGSIRESEGGVSPAIGQ 996
            QVMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQGRFA AS+AAGPQPVINMVTGEGFLNFDSEAGVNVS +SPKPSLPGFGS            QGSPQPP SMSSSFSV QQHPQAMLMTPAAATTPAALHKGAVPTRAAMSAISAADAGKKRVLSDRTAYVPSAGVPGVGASAGGGWSCSGS+RESEGGVSPA+GQ
Sbjct:  301 QVMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQGRFAAASNAAGPQPVINMVTGEGFLNFDSEAGVNVSTASPKPSLPGFGSSCSSGTGTSQASQGSPQPPVSMSSSFSVGQQHPQAMLMTPAAATTPAALHKGAVPTRAAMSAISAADAGKKRVLSDRTAYVPSAGVPGVGASAGGGWSCSGSVRESEGGVSPAMGQ 632
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BLAST of mRNA_Ecto-sp9_F_contig8715.16897.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W2_9PHAE)

HSP 1 Score: 335 bits (860), Expect = 7.360e-110
Identity = 163/166 (98.19%), Postives = 164/166 (98.80%), Query Frame = 1 
Query:    4 VMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQ 501
            VMAELNSLLPILTRADGMS+DNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWF EYEITRNIYNSLLEPEQGG HFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQ
Sbjct:  215 VMAELNSLLPILTRADGMSQDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFNEYEITRNIYNSLLEPEQGGGHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQ 380
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BLAST of mRNA_Ecto-sp9_F_contig8715.16897.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC48_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 6.130e-52
Identity = 82/84 (97.62%), Postives = 82/84 (97.62%), Query Frame = 1 
Query:  250 VIFLEHGWFKEYEITRNIYNSLLEPEQGGQHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQ 501
            VIFLEHGWF EYEITRNIYNSLLEPEQGG HFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQ
Sbjct:   15 VIFLEHGWFNEYEITRNIYNSLLEPEQGGGHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAINRDLSEGVEATVAAQ 98
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8715.16897.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNW6_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 1.540e-45
Identity = 83/91 (91.21%), Postives = 84/91 (92.31%), Query Frame = 1 
Query:    7 MAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIF--LEHGW 273
            MAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLS CIL+    LE  W
Sbjct:    1 MAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSRCILLALTKLESLW 91
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8715.16897.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S8_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 7.720e-43
Identity = 84/92 (91.30%), Postives = 85/92 (92.39%), Query Frame = 1 
Query:    4 VMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILVIF--LEHGW 273
            VMAELNSLLPILTRADGMSRDNSSSFG LGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCIL+    LE  W
Sbjct:  341 VMAELNSLLPILTRADGMSRDNSSSFGTLGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILLALTKLESLW 432
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8715.16897.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWQ9_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 1.360e-34
Identity = 73/93 (78.49%), Postives = 76/93 (81.72%), Query Frame = 1 
Query:    7 MAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRS-------QDGLE---VLEPVVGILAENPGLLRQVMCWHLSHCILVI 255
            MAELNSLLPILTRADG SRDNSSSFGALGVVLV GVLA ILLRLG S       ++GL    VLEPVVGILAE PGLLRQVMCWHLSHCIL +
Sbjct:    1 MAELNSLLPILTRADGRSRDNSSSFGALGVVLVNGVLASILLRLGLSVSTTSWMRNGLGNVWVLEPVVGILAETPGLLRQVMCWHLSHCILSV 93
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8715.16897.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDA8_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 5.330e-25
Identity = 95/168 (56.55%), Postives = 99/168 (58.93%), Query Frame = 1 
Query:  499 QGRFATASSAAGPQPVINMVTGEGFLNFDSEAGVNVSNSSPKPSLPGFGSXXXXXXXXXXXXQGSPQPPASMSSSFSVAQQHPQAMLMTPAAATTPAALHKGAVPTRAAMSAISAADAGKKRVLSDRTAYVPSAGVPGVGASAGGGWSCSGSIRESEGGVSPAIGQSK 1002
            Q RFA ASSAAGPQPVINMVTGEGFLNFDSEAGVNVS     P  PG  +XXXXXXXXXXXX                                                         KKRVLSDRTAYVPSAGVPGVGASAGGG SCSGS+RESEGGVSPA+GQS+
Sbjct:    9 QDRFAAASSAAGPQPVINMVTGEGFLNFDSEAGVNVSVRFDCP--PGCSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------XXXXXXXXXXXXXXXXXXXXKKRVLSDRTAYVPSAGVPGVGASAGGGLSCSGSVRESEGGVSPAMGQSR 155
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8715.16897.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV1_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 3.970e-22
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 1 
Query:    4 VMAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEV 165
            VMAELNSLLPILTRADGMS+DNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEV
Sbjct:   90 VMAELNSLLPILTRADGMSQDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEV 143
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8715.16897.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X2_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.410e-19
Identity = 44/82 (53.66%), Postives = 60/82 (73.17%), Query Frame = 1 
Query:    7 MAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDGLEVLEPVVGILAENPGLLRQVMCWHLSHCILV 252
            + EL++L+P+L  AD +    ++SFGALG VLVK  LAY+LLRLGR+ + L  LEPVV +L+ +PGL+RQ   WHL HC +V
Sbjct:    1 LEELSALVPLLLDADDLCARAAASFGALGTVLVKCALAYVLLRLGRTAECLRALEPVVPLLSLHPGLVRQSAVWHLVHCAMV 82
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8715.16897.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
Uncharacterized4.410e-23297.51protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.170e-21293.98protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized7.360e-11098.19protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.130e-5297.62protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.540e-4591.21protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized7.720e-4391.30protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 131... [more]
Uncharacterized1.360e-3478.49protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.330e-2556.55protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.970e-2298.15protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.410e-1953.66protein (Fragment) n=1 Tax=Tribonema minus TaxID=3... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8715contigEcto-sp9_F_contig8715:178..4306 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons9
Model size1103
Cds size1083
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930917.1553226-UTR-Ecto-sp9_F_contig8715:177..1831622930917.1553226-UTR-Ecto-sp9_F_contig8715:177..183Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig8715 178..183 +
1692278948.000805-UTR-Ecto-sp9_F_contig8715:177..1831692278948.000805-UTR-Ecto-sp9_F_contig8715:177..183Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig8715 178..183 +
1622930917.373675-UTR-Ecto-sp9_F_contig8715:4292..43061622930917.373675-UTR-Ecto-sp9_F_contig8715:4292..4306Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig8715 4293..4306 +
1692278948.1240642-UTR-Ecto-sp9_F_contig8715:4292..43061692278948.1240642-UTR-Ecto-sp9_F_contig8715:4292..4306Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig8715 4293..4306 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930917.172833-CDS-Ecto-sp9_F_contig8715:183..3391622930917.172833-CDS-Ecto-sp9_F_contig8715:183..339Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 184..339 +
1692278948.0132225-CDS-Ecto-sp9_F_contig8715:183..3391692278948.0132225-CDS-Ecto-sp9_F_contig8715:183..339Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 184..339 +
1622930917.1941764-CDS-Ecto-sp9_F_contig8715:1164..12511622930917.1941764-CDS-Ecto-sp9_F_contig8715:1164..1251Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 1165..1251 +
1692278948.0258396-CDS-Ecto-sp9_F_contig8715:1164..12511692278948.0258396-CDS-Ecto-sp9_F_contig8715:1164..1251Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 1165..1251 +
1622930917.2139938-CDS-Ecto-sp9_F_contig8715:1746..18691622930917.2139938-CDS-Ecto-sp9_F_contig8715:1746..1869Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 1747..1869 +
1692278948.0384278-CDS-Ecto-sp9_F_contig8715:1746..18691692278948.0384278-CDS-Ecto-sp9_F_contig8715:1746..1869Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 1747..1869 +
1622930917.2330272-CDS-Ecto-sp9_F_contig8715:2243..23721622930917.2330272-CDS-Ecto-sp9_F_contig8715:2243..2372Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 2244..2372 +
1692278948.0548496-CDS-Ecto-sp9_F_contig8715:2243..23721692278948.0548496-CDS-Ecto-sp9_F_contig8715:2243..2372Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 2244..2372 +
1622930917.2696528-CDS-Ecto-sp9_F_contig8715:2554..26621622930917.2696528-CDS-Ecto-sp9_F_contig8715:2554..2662Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 2555..2662 +
1692278948.0696452-CDS-Ecto-sp9_F_contig8715:2554..26621692278948.0696452-CDS-Ecto-sp9_F_contig8715:2554..2662Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 2555..2662 +
1622930917.2930844-CDS-Ecto-sp9_F_contig8715:2939..31311622930917.2930844-CDS-Ecto-sp9_F_contig8715:2939..3131Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 2940..3131 +
1692278948.0799818-CDS-Ecto-sp9_F_contig8715:2939..31311692278948.0799818-CDS-Ecto-sp9_F_contig8715:2939..3131Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 2940..3131 +
1622930917.3189416-CDS-Ecto-sp9_F_contig8715:3428..36231622930917.3189416-CDS-Ecto-sp9_F_contig8715:3428..3623Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 3429..3623 +
1692278948.090562-CDS-Ecto-sp9_F_contig8715:3428..36231692278948.090562-CDS-Ecto-sp9_F_contig8715:3428..3623Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 3429..3623 +
1622930917.3400266-CDS-Ecto-sp9_F_contig8715:3940..39901622930917.3400266-CDS-Ecto-sp9_F_contig8715:3940..3990Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 3941..3990 +
1692278948.1010146-CDS-Ecto-sp9_F_contig8715:3940..39901692278948.1010146-CDS-Ecto-sp9_F_contig8715:3940..3990Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 3941..3990 +
1622930917.3560135-CDS-Ecto-sp9_F_contig8715:4249..42921622930917.3560135-CDS-Ecto-sp9_F_contig8715:4249..4292Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 4250..4292 +
1692278948.1103454-CDS-Ecto-sp9_F_contig8715:4249..42921692278948.1103454-CDS-Ecto-sp9_F_contig8715:4249..4292Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8715 4250..4292 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8715.16897.1prot_Ecto-sp9_F_contig8715.16897.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig8715 184..4292 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig8715.16897.1

>prot_Ecto-sp9_F_contig8715.16897.1 ID=prot_Ecto-sp9_F_contig8715.16897.1|Name=mRNA_Ecto-sp9_F_contig8715.16897.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=361bp
MAELNSLLPILTRADGMSRDNSSSFGALGVVLVKGVLAYILLRLGRSQDG
LEVLEPVVGILAENPGLLRQVMCWHLSHCILVIFLEHGWFKEYEITRNIY
NSLLEPEQGGQHFAVWGRGHFQDATPFPPVDSLHSQGNSFLCSNPICKAI
NRDLSEGVEATVAAQGRFATASSAAGPQPVINMVTGEGFLNFDSEAGVNV
SNSSPKPSLPGFGSSSSSGTGTSQASQGSPQPPASMSSSFSVAQQHPQAM
LMTPAAATTPAALHKGAVPTRAAMSAISAADAGKKRVLSDRTAYVPSAGV
PGVGASAGGGWSCSGSIRESEGGVSPAIGQSKEEDMRKADWLGRRSRRAH
QRMLQEARAL*
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mRNA from alignment at Ecto-sp9_F_contig8715:178..4306+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig8715.16897.1 ID=mRNA_Ecto-sp9_F_contig8715.16897.1|Name=mRNA_Ecto-sp9_F_contig8715.16897.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4129bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8715:178..4306+ (Ectocarpus species9 EcSCA_722f female)
CAGGTGATGGCGGAGTTGAACTCCCTCTTGCCGATCCTGACACGTGCTGA
CGGCATGAGCCGGGACAACTCGTCCTCGTTCGGAGCTCTCGGTGTCGTGC
TCGTGAAGGGGGTGTTGGCCTACATCTTGCTACGCTTGGGTAGGAGCCAA
GACGGGCTGGAGGTGTGTGCCGGCGACGATGTTGCCGTTTCGGTAGTTTA
TGTCTCGCCTGCGGTGACTGCAAGAGGTGTCGGAGTCGCTTGTTTTCCTC
GACGGCAGCGTCCTCAAGGCCGCCTCGTGTATGTTTCACAAAAGCCTTGT
TAGACGCAACGTTTTCCTCTTGCGTGAGGCTTTTCGTATTTTGGCAGGGG
TGACGGGTAGGTTTGTCCGTGTCCACAACGTCGTGGATGCGAAACGGTCT
GGGGAACGTTTGGTTTTGTTTGTTGTGGCTCTTGTGTGGCTTGTTTTTCT
ATCCGCAGCAAACGTAAGATTGCTTGGTGAATGTCCTAGACGGTTGGCGT
GGAATACCGGGCGCAACAATTTTTGCCTTATCCTAAGAAGAGCGTGTGCC
GTTTGTATCGATGTGTCTGGGCGACCCCATTTTTACTCCCGCAAATGACG
TATCGAAATATCGTTTTCGTACCGCGACAATACGGAACGAAATCTTCAAC
TCGGTCTGCGCGGAGTGTTTTCATGAGGGCTTGTTTTCGCAAGGGCTGGT
TGTTTTTGTTGTGTTCTCGTAGTCTGCGACGCGTGTTGGACGCGCCGTTA
CGCTCACAAGTGAATCATGAGACTGCCTTGGCAGCAGGTTCTTCGCAAGC
TTTCCTTGTCCGAAAACCTGCGCACCATGCTGTGTTCACGTAGAGCCGTC
TACTGTAGCTCCTCGTTCCAAACCTCCACAGCAAACATTCGTGTTTTTCG
CGCATACCCCCTCACGTTGTTCCCATAGCTTCTTGACTGCCGTGTCCACG
ACTGTGTTGTTGCTCTCATCTACTGTTGGTATCGTAGGTACTGGAGCCGG
TGGTGGGCATCCTGGCGGAAAACCCGGGGCTGCTGCGGCAGGTCATGTGC
TGGCATTTGTCGCACTGCATTCTGGTGAGTCATCACCAGCAGAGCGTGTC
GTGTCTGTACAATTCCTTGTCTACCTTGTGTCTTGTTGTGTGTTGGTATT
TAGTGTTCCATGGTCGGTGCCGCCGTGAGATTGCCCATCTTGTTGATCAT
CCCATGTTTTCCATGTCATTTAGCTTGCGCTTACGAAGCTCCGATCGCTA
TGGGCCGGTTTTGAAGCCTCCCATCGGACTATGCCTGTGTCGGGCATCGT
CCAACAGTAATACAGCGAGGTGTTTGTTGACTGCCGTTGTTCGTAGCAGC
GTGGTCGCCGGTCCAACAGTGTTGTGTGTCTTGCCATGTACATTATGGTT
GAAGCCCTCGCACAGTCCTTTCCGTCATGATTGTCATGCCCGAAACCAAA
CAGTTATTCAAGTACGATCATGTTAGTGACTGAAGCACGCACTTTCATGG
TCATCCTGTGGCCTGATCCTTGTTGGGGGTGCCGGCAAATGTTCTGCGCC
GGCAACAATTTTGTTATAGGTGATCTTCCTGGAGCATGGGTGGTTCAAAG
AGTACGAAATCACGCGAAACATTTACAACAGCCTTCTGGAGCCCGAACAG
GGCGGGCAGCACTTCGCAGTGTGGGGCCGAGGCCATTTCCAGGTACATCA
CAAATTCTGGAGGTTCGGGGTTGCCACATGTCCTGCGGGTTTCCTCTTTA
AACTTGGGCTGTTTCGGCCGTCTTGCTCGTAGTCTTCTTTAGGGTGGACT
GGTTGAATGCCAATACTATGGCGGGAAATAACAATCGCTCTTCGCTTTGG
GGTGGAGTGGGGGGGGGGCGTTCTCGTCAAGGAGTGCAATGCATTCTCAA
AAGATTATATATGTAGTTGGGTGTAATGTATTATGGTACCTGTCAGATGT
GGGGAAAGTAAGTGGAGGCAGTCCACTTCAATTGTTACGTTCAGGGGCCC
AAACTTATCGTGTTTCGTCATACCTGTGTTGTTGGTGTCTGTGCTCGTAT
TTCTTCTTGTGTGCAGGATGCGACCCCGTTCCCTCCGGTGGACAGCCTCC
ACTCCCAGGGAAACTCCTTTTTGTGTTCCAACCCCATCTGCAAGGCCATC
AACAGGGATCTCAGCGAGGGCGTCGAGGCAACCGTCGCCGCACAGGTTTT
GATACAATGTCTTGGCTCTTCGTTCCCTACCCCCTTAACCTCCCGTGCCC
CTTTTCTCCCTCTATTTAGTCAGGTTTGGTGCCTTCGTATATCCCGGCAT
TTTGTTTTGCTACGCCGTTCGTGCGATGCTCTCTCCATGCCCTCACTCCA
TGTCCGATGACCACAACAACTCTTCAGGGCCGTTTTGCGACGGCATCGAG
CGCCGCCGGGCCGCAGCCGGTGATCAATATGGTCACCGGGGAAGGCTTCC
TCAACTTTGACTCGGAGGCGGGGGTGAACGTTTCGGTGAGATTTGACTGC
CCGCCAGGGTGTTTCCGCAAGTACCATGTTTTGTTGTTGCATGCATCCAT
TGTACATCGCGGCACAGAAATTTCGTTCCGTGCAGCCCAGCCCGCAGGAT
GGTTTTTATCCGGTTTCGGGAAATAAGGCAGCCCAACTGTCGTTATTTAC
CATGTTCCGTTTCCGTCGCGGCCCCATCTCGCTTAATTCCCATGCACGAT
CGTGGAACACTGGCGGTGCTGATACGCCCTCGTCGCTCTCGCGCGGAATT
CCCTGTTTATAGAACTCCTCCCCCAAGCCGTCCCTGCCGGGCTTTGGCTC
CAGCTCCAGCTCCGGTACGGGAACAAGCCAAGCGTCGCAGGGATCACCAC
AACCGCCCGCGTCGATGTCTTCGTCGTTTTCGGTCGCGCAGCAGCATCCG
CAAGCGATGTTGATGACTCCCGCTGCTGCCACGACTCCCGCCGCTCTACA
CAAGGTGTGCGGCGCCTTGTTTGGCCCCGCTTGACGATGGTCTTGGATGA
ATGTACACGTGTGGACAAACAATGGAAGACCCCGATGATTCGTCAAGGGA
CACAATCCACTACTGTCTACCCTTCAGTAGTACCCATCCGTAACCGAAAC
ACTCTGCTCCTTTGCATACCACCATAACGTATTTTGCTAGAGATTCAAAT
GTTCCTGAGGACGATCGTAATCATATCCAATAACAGCAGGCCTCAGAGTT
TTGTATTGTCCTGCTGTCCCTTTTTATGCATCCACATCCCTGCGGCGAAA
GGGGGCTGTTCCGACGAGAGCGGCGATGTCGGCGATATCGGCGGCCGACG
CCGGCAAGAAGAGGGTGTTGTCAGATCGCACCGCCTACGTCCCCTCTGCC
GGGGTCCCAGGGGTTGGGGCCAGTGCGGGAGGGGGTTGGAGTTGCTCGGG
GTCTATTCGAGAAAGTGAAGGCGGCGTTTCTCCGGCGATAGGCCAGGTTC
GTTTTCTGACCTACGTTGATCTGTGTCATGCTGAAGTTCCTTACGGAGCT
ATGGCAAGAGCCCAACTCACCCAGCCAGAGTCGCTACTAATACTGGTACG
GGCTTGTGTGGCAAAAGCGAAACGTGCGAATCGTATATCTTTCCGGCAGG
GGGCGGCCGCACTCTGCAACGTGAGTCGGTTAGAAGCACGGAGAGGCTGC
TTGCGCAGTTGGCGTATCGAGGCACGACGTGGGTCAAATTTTGCATGATT
CGTTGACCCATGCGTTTCTTTTTCGCCGCAATCACTTCACGTCCTCCCTT
CTGCATTTCAAAGTCCAAGGAAGAGGATATGAGAAAGGCAGATTGGCTTG
GACGAAGATCAAGGTCCCGAAACACGTATTTGTTCGATACTTGCATTTGG
TGGTGGGGCCCAACTCATTCCAGTACTGCATAGGGATGGCGGCTGTGATG
ACACTCATGGACCCTGTGCATGCCTAGTACTGTTTGCGACTACCACAAAA
TTAGAACCGCCTGTGGCCCCACAGTGAGCGGCACGGACTTTCACATACCC
CCATCTATGTTCCAAAACACGTTCCCCAGATAATTTATTCCCGCTGCCAC
CCACCCGCCCTCCTGTGGCCAGGCGAGCGCACCAGCGAATGCTTCAGGAA
GCTCGAGCTCTGTGACGCCAAGGACACGG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig8715:178..4306+

>mRNA_Ecto-sp9_F_contig8715.16897.1 ID=mRNA_Ecto-sp9_F_contig8715.16897.1|Name=mRNA_Ecto-sp9_F_contig8715.16897.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2166bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8715:178..4306+ (Ectocarpus species9 EcSCA_722f female)
ATGGCGGAGTTGAACTCCCTCTTGCCGATCCTGACACGTGCTGACGGCAT
GAGCCGGGACAACTCGTCCTCGTTCGGAGCTCTCGGTGTCGTGCTCGTGA
AGGGGGTGTTGGCCTACATCTTGCTACGCTTGGGTAGGAGCCAAGACGGG
CTGGAGATGGCGGAGTTGAACTCCCTCTTGCCGATCCTGACACGTGCTGA
CGGCATGAGCCGGGACAACTCGTCCTCGTTCGGAGCTCTCGGTGTCGTGC
TCGTGAAGGGGGTGTTGGCCTACATCTTGCTACGCTTGGGTAGGAGCCAA
GACGGGCTGGAGGTACTGGAGCCGGTGGTGGGCATCCTGGCGGAAAACCC
GGGGCTGCTGCGGCAGGTCATGTGCTGGCATTTGTCGCACTGCATTCTGG
TACTGGAGCCGGTGGTGGGCATCCTGGCGGAAAACCCGGGGCTGCTGCGG
CAGGTCATGTGCTGGCATTTGTCGCACTGCATTCTGGTGATCTTCCTGGA
GCATGGGTGGTTCAAAGAGTACGAAATCACGCGAAACATTTACAACAGCC
TTCTGGAGCCCGAACAGGGCGGGCAGCACTTCGCAGTGTGGGGCCGAGGC
CATTTCCAGGTGATCTTCCTGGAGCATGGGTGGTTCAAAGAGTACGAAAT
CACGCGAAACATTTACAACAGCCTTCTGGAGCCCGAACAGGGCGGGCAGC
ACTTCGCAGTGTGGGGCCGAGGCCATTTCCAGGATGCGACCCCGTTCCCT
CCGGTGGACAGCCTCCACTCCCAGGGAAACTCCTTTTTGTGTTCCAACCC
CATCTGCAAGGCCATCAACAGGGATCTCAGCGAGGGCGTCGAGGCAACCG
TCGCCGCACAGGATGCGACCCCGTTCCCTCCGGTGGACAGCCTCCACTCC
CAGGGAAACTCCTTTTTGTGTTCCAACCCCATCTGCAAGGCCATCAACAG
GGATCTCAGCGAGGGCGTCGAGGCAACCGTCGCCGCACAGGGCCGTTTTG
CGACGGCATCGAGCGCCGCCGGGCCGCAGCCGGTGATCAATATGGTCACC
GGGGAAGGCTTCCTCAACTTTGACTCGGAGGCGGGGGTGAACGTTTCGGG
CCGTTTTGCGACGGCATCGAGCGCCGCCGGGCCGCAGCCGGTGATCAATA
TGGTCACCGGGGAAGGCTTCCTCAACTTTGACTCGGAGGCGGGGGTGAAC
GTTTCGAACTCCTCCCCCAAGCCGTCCCTGCCGGGCTTTGGCTCCAGCTC
CAGCTCCGGTACGGGAACAAGCCAAGCGTCGCAGGGATCACCACAACCGC
CCGCGTCGATGTCTTCGTCGTTTTCGGTCGCGCAGCAGCATCCGCAAGCG
ATGTTGATGACTCCCGCTGCTGCCACGACTCCCGCCGCTCTACACAAGAA
CTCCTCCCCCAAGCCGTCCCTGCCGGGCTTTGGCTCCAGCTCCAGCTCCG
GTACGGGAACAAGCCAAGCGTCGCAGGGATCACCACAACCGCCCGCGTCG
ATGTCTTCGTCGTTTTCGGTCGCGCAGCAGCATCCGCAAGCGATGTTGAT
GACTCCCGCTGCTGCCACGACTCCCGCCGCTCTACACAAGGGGGCTGTTC
CGACGAGAGCGGCGATGTCGGCGATATCGGCGGCCGACGCCGGCAAGAAG
AGGGTGTTGTCAGATCGCACCGCCTACGTCCCCTCTGCCGGGGTCCCAGG
GGTTGGGGCCAGTGCGGGAGGGGGTTGGAGTTGCTCGGGGTCTATTCGAG
AAAGTGAAGGCGGCGTTTCTCCGGCGATAGGCCAGGGGGCTGTTCCGACG
AGAGCGGCGATGTCGGCGATATCGGCGGCCGACGCCGGCAAGAAGAGGGT
GTTGTCAGATCGCACCGCCTACGTCCCCTCTGCCGGGGTCCCAGGGGTTG
GGGCCAGTGCGGGAGGGGGTTGGAGTTGCTCGGGGTCTATTCGAGAAAGT
GAAGGCGGCGTTTCTCCGGCGATAGGCCAGTCCAAGGAAGAGGATATGAG
AAAGGCAGATTGGCTTGGACGAAGATCAAGTCCAAGGAAGAGGATATGAG
AAAGGCAGATTGGCTTGGACGAAGATCAAGGCGAGCGCACCAGCGAATGC
TTCAGGAAGCTCGAGCTCTGTGAGCGAGCGCACCAGCGAATGCTTCAGGA
AGCTCGAGCTCTGTGA
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