mRNA_Ecto-sp9_F_contig8697.16874.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Zn-dependent (peptidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH12_ECTSI) HSP 1 Score: 419 bits (1076), Expect = 3.880e-147 Identity = 221/238 (92.86%), Postives = 224/238 (94.12%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAMSEFLSRLPEETEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAV+DKV A+LDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEA+SEFLSRLPEETEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLY PGEVVPGQASV
Sbjct: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVXXXXXXXXXXXXXAHLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAVSEFLSRLPEETEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYKPGEVVPGQASV 238
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: M16C_associated (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB25_9PHAE) HSP 1 Score: 441 bits (1134), Expect = 4.530e-145 Identity = 232/245 (94.69%), Postives = 236/245 (96.33%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL-------SVLDGSSEAMSEFLSRLPEETEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
MMETGTS+MDRVQLSRRIGSQTGG+YATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL SVLDGSSEA+SEFLSRLPEETEGA TNTAPLAEQVKLL+EKDEGFVVPTQVNYVVKGGPLY PGEVVPGQASV
Sbjct: 669 MMETGTSKMDRVQLSRRIGSQTGGIYATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLVNLTGDKSVLDGSSEAVSEFLSRLPEETEGAVTNTAPLAEQVKLLEEKDEGFVVPTQVNYVVKGGPLYKPGEVVPGQASV 913
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Metalloenzyme, (LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY54_9STRA) HSP 1 Score: 228 bits (580), Expect = 4.100e-65 Identity = 121/246 (49.19%), Postives = 172/246 (69.92%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLAD-QPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL-------SVLDGSSEAMSEFLSRLPEETEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
++ETG MDRV+L+R IG+QTGGVY T L + GG +A + YLFLRGKAV+ K P++L I+ V+T+A LDSQQR +E+LKE+KARL +SI GSGHS+A+ R+E+RYT++GYL E+ GG++ V TVK +L AE+DWP +L RL+++RA+++++ L VLD ++ A+S F++ +P EG +++ AE L+ ++EGF V TQVNYV KGG L+ PGEVVPG V
Sbjct: 658 LLETGAGSMDRVELTRHIGTQTGGVYCTSLTGTKMGGGGVIASSDDVVGYLFLRGKAVSAKTPELLDIVRTVVTEARLDSQQRAIEILKETKARLDASIVGSGHSYASMRIESRYTLEGYLNEISGGISSVETVKSVLKMAEDDWPALLARLEKIRASIVTRNNLLINLTGDQEVLDAAAPAISNFINSIPGAGEGVVSHSNWAAE-ANLIPARNEGFAVQTQVNYVGKGGRLFQPGEVVPGSFQV 902
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8U1_9STRA) HSP 1 Score: 207 bits (526), Expect = 9.950e-58 Identity = 113/247 (45.75%), Postives = 160/247 (64.78%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQP-SAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL-------SVLDGSSEAMSEFLSRLPEETEGAATNTAPLAEQV-KLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
+ + GTSE+DRV L R+IG+ TGG+ A+F DQ ++GG V+DP + +LF+RGK V K+ + ++ D++ DA LD+QQRV+E+LK+S A SS+ SGHSFA +RL+ARYT Y+ E+ GG++Y+ T+K + ++AE DWP +L RL+ +R LLSK L VLD + E M+ F+ ++P + AP +V LL ++E FVVPTQVNYV KGG L PGE V G A V
Sbjct: 664 LKDVGTSELDRVALDRKIGTHTGGISASFSVDQGYTSGGKVSDPSDVNGHLFVRGKCVVSKIDMLFGLVNDILADAELDNQQRVLELLKQSMAGYQSSVLSSGHSFAASRLDARYTTSDYIDEMTGGISYIETLKTLTEQAEKDWPSLLARLEGIRDKLLSKAGMLINLTADQEVLDAAKEPMASFIGKVP------SREVAPQRWEVGSLLPVENEAFVVPTQVNYVGKGGRLVEPGEAVSGSAQV 904
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Metalloenzyme, (LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW9_9STRA) HSP 1 Score: 201 bits (512), Expect = 7.120e-56 Identity = 112/247 (45.34%), Postives = 160/247 (64.78%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVY-ATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL-------SVLDGSSEAMSEFLSRLPEETEGAA-TNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
++E+G DRV+LSR I + TGGVY +T + A GAVA P + YLFLRGKAV+ K P++LSI+ V+ +A LDSQQR VE+LKE KARL +S+ GSGHSFA TR+++R+ ++ YL E+ GG++ + TVK L AE DWP +L RL+ +RA + + + VLD + + + +F++ +PE A + A A++ + ++EGF+VPTQVNYV KGG L+ PGE PG V
Sbjct: 593 LLESGAGARDRVELSRHINTHTGGVYCSTVTGTRAGANGAVAAPDDVVGYLFLRGKAVSAKTPELLSIIRSVVREARLDSQQRAVEILKEMKARLEASVVGSGHSFAATRIDSRHALEPYLNEIGGGLSSLATVKANLAAAEEDWPALLARLEELRAAIFKRDNLIINLTGDQGVLDAAEQPVRDFIASMPESASVLAPASGAGWAKEAQFSPIRNEGFIVPTQVNYVGKGGRLFEPGEKAPGSFQV 839
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFS8_9STRA) HSP 1 Score: 197 bits (500), Expect = 3.860e-54 Identity = 115/263 (43.73%), Postives = 159/263 (60.46%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGG----VYATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKK-----QFL------SVLDGSSEAMSEFLSRLPEETEGAATN----------TAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
M + G E+ ++LSR+IG+ TGG ++ T + + G V+D + L L+GKA DK+ ++ SI ++T ANLDSQ++V+EMLKESK+ L S IQGSGHSFANTR+ +RYT GY+ E G+TY+N+VK ML+EAE DWP L RL+++R T+L + FL +V+DG + FL LP + +G+A T E VK DEGFVVPTQV+YV KGG L+ GE VP ++V
Sbjct: 686 MKDNGAGELSDIELSRKIGTHTGGAGVGLFTTTIRSETEEEGTVSDGNHMLTKLTLQGKATTDKIDELFSIFSLMLTKANLDSQKKVIEMLKESKSGLESGIQGSGHSFANTRMSSRYTPAGYIDEKMSGITYLNSVKIMLEEAEKDWPTFLARLEKMRDTILDNETCRNGMFLDITGEKAVMDGIQSNVESFLENLPGDAKGSALIDFHNEEHPWLTQAKTEMVKNAPIADEGFVVPTQVSYVGKGGKLFDVGEKVPASSAV 948
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9I1_9STRA) HSP 1 Score: 186 bits (473), Expect = 4.590e-52 Identity = 112/252 (44.44%), Postives = 153/252 (60.71%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLAD---QPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAMSE-------FLSRLPEET--EGAATNTAPLAE--QVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
++E GT++ D L+RRIG TGGV + L D P G + + YLFLRGKAV DKV ++ +IM D++TD NLD Q RV+EML+E+KA + SSI SGH+FA +RL A T G L E GGVTY+NTV+++L++AEN+WP +L RLQ+++ TLL+ + L G E +S F + LP++ + AA + P + V L EG VVPTQVNYV G +Y PG+ V A V
Sbjct: 168 LLECGTNKEDETTLTRRIGRHTGGVRSAILRDLVEHPE--GKCVEGDEIVHYLFLRGKAVPDKVSELFAIMKDILTDVNLDRQSRVIEMLRETKASMESSIVTSGHAFAASRLAAHDTGFGVLREQTGGVTYLNTVRELLEQAENEWPSLLSRLQKIQETLLNSNTLVVNLTGDKEVLSASVPVAETFATDLPKKASVDVAADRSVPTLDLRDVPRLPAVSEGLVVPTQVNYVGMAGRIYQPGDAVDSSAFV 417
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMW9_9STRA) HSP 1 Score: 190 bits (482), Expect = 9.190e-52 Identity = 112/252 (44.44%), Postives = 155/252 (61.51%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLAD--QPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAMSE-------FLSRLPEE-----TEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
++E GT MD ++RRIG+ TGGV A L D + AG AVA + YLFLRGKAV DK+P++ SI D+ TD NLD Q RV+EML+E++A + SS+ SGHS+A TRL AR T G L E GG++Y+ TVK++L++AENDWP +L RL+ ++ ++ + L G E + F + LP++ EG T T L+ ++ L + DEG VVPTQVNYV G +Y GE VP ++V
Sbjct: 611 LLECGTKSMDETAMTRRIGTHTGGVRAALLRDLVEDPAGAAVAGD-EIVHYLFLRGKAVPDKIPELFSIFKDIFTDVNLDRQSRVLEMLRETRASMESSVVTSGHSYAATRLAARTTGLGVLREKVGGISYLETVKELLEQAENDWPALLARLEAIQKKIVDADALIVNLTGDKEVLGSATPVAESFAAGLPKQGKVAFPEGRTTRTVDLS-GMERLPDVDEGLVVPTQVNYVGMAGRIYETGEKVPMSSAV 860
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYW5_9STRA) HSP 1 Score: 184 bits (468), Expect = 1.850e-51 Identity = 112/263 (42.59%), Postives = 162/263 (61.60%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGV----YATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLS--VLDGSSE---------AMSEFLSRLPEETEGA------ATNTAPLAEQVKLLQE----KDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
M +TG E V L RRIG+ TGGV T + + +A AV + +F+RGKA +DKV ++ SI ++TDANLDSQ +VVEMLKE++ RL +S+Q +GHS+ N RL AR++V GY+GE G+TY+ +VK++L +AE DWP +L RL+++R+T+L + + VLD + + ++ +FL+ +P + A A +AE K + E DEGFVVPTQV+YV KGG LY PGE V G ++V
Sbjct: 136 MTDTGAGEYSDVALQRRIGTHTGGVDVDNMITGVKKEGAAQDAVGEGKHFVSKMFIRGKATSDKVDELFSIFNLILTDANLDSQSKVVEMLKETRTRLEASVQSAGHSYCNMRLSARHSVPGYIGEKMSGLTYLESVKEILKQAEEDWPALLARLEKIRSTILDETSCRAGMVLDITGDKNVLTKIQPSVDKFLNEIPGKPSEAKYHDFYAEEHPWVAEAEKEMNEIVPLDDEGFVVPTQVSYVGKGGLLYEPGESVSGSSTV 398
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MIS0_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.940e-51 Identity = 110/264 (41.67%), Postives = 160/264 (60.61%), Query Frame = 1
Query: 1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLA----DQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLS-----------VLDGSSEAMSEFLSRLP------EETEGAATNTAPLAEQVKLLQEK-----DEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
++ETG ++ VQLSRR+G TGG+ A+ L ++ A +D + LFLRGK+ ADK ++ S+ ++TDANLDS +++VE+L+E+K R+ SS+Q +GHS+ANTRL +RYT GY+GE GG+TY++TVK++LD AENDWP +L RL+ +R+ LL + + V++ + + FLS LP E+ + + P Q K DEGFVVPTQV+YV KGG +Y GE V G +V
Sbjct: 705 LLETGAGDLSDVQLSRRMGIHTGGISASTLMVPVFEEGQDESAASDGTKMITKLFLRGKSTADKAGELFSLYNLILTDANLDSPKKIVEILRETKTRMESSVQSAGHSYANTRLASRYTPSGYIGEKMGGITYLDTVKELLDAAENDWPSVLARLEGIRSALLKQTKCRDGMILDITGDKRVMETIAPEVESFLSNLPGDAAPSEKFQDFYSEDHPWVTQAKSEMSAAAPLVDEGFVVPTQVSYVGKGGKIYEAGEHVSGSTAV 968 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig8697.16874.1 >prot_Ecto-sp9_F_contig8697.16874.1 ID=prot_Ecto-sp9_F_contig8697.16874.1|Name=mRNA_Ecto-sp9_F_contig8697.16874.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=238bp MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLback to top mRNA from alignment at Ecto-sp9_F_contig8697:1829..5229- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig8697.16874.1 ID=mRNA_Ecto-sp9_F_contig8697.16874.1|Name=mRNA_Ecto-sp9_F_contig8697.16874.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3401bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8697:1829..5229- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig8697:1829..5229- >mRNA_Ecto-sp9_F_contig8697.16874.1 ID=mRNA_Ecto-sp9_F_contig8697.16874.1|Name=mRNA_Ecto-sp9_F_contig8697.16874.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1428bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8697:1829..5229- (Ectocarpus species9 EcSCA_722f female)back to top |