mRNA_Ecto-sp9_F_contig8697.16874.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig8697.16874.1
Unique NamemRNA_Ecto-sp9_F_contig8697.16874.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Zn-dependent (peptidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH12_ECTSI)

HSP 1 Score: 419 bits (1076), Expect = 3.880e-147
Identity = 221/238 (92.86%), Postives = 224/238 (94.12%), Query Frame = 1
Query:    1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAMSEFLSRLPEETEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
            MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAV+DKV             A+LDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEA+SEFLSRLPEETEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLY PGEVVPGQASV
Sbjct:    1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVSDKVXXXXXXXXXXXXXAHLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAVSEFLSRLPEETEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYKPGEVVPGQASV 238          
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: M16C_associated (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB25_9PHAE)

HSP 1 Score: 441 bits (1134), Expect = 4.530e-145
Identity = 232/245 (94.69%), Postives = 236/245 (96.33%), Query Frame = 1
Query:    1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL-------SVLDGSSEAMSEFLSRLPEETEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
            MMETGTS+MDRVQLSRRIGSQTGG+YATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL       SVLDGSSEA+SEFLSRLPEETEGA TNTAPLAEQVKLL+EKDEGFVVPTQVNYVVKGGPLY PGEVVPGQASV
Sbjct:  669 MMETGTSKMDRVQLSRRIGSQTGGIYATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLVNLTGDKSVLDGSSEAVSEFLSRLPEETEGAVTNTAPLAEQVKLLEEKDEGFVVPTQVNYVVKGGPLYKPGEVVPGQASV 913          
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Metalloenzyme, (LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY54_9STRA)

HSP 1 Score: 228 bits (580), Expect = 4.100e-65
Identity = 121/246 (49.19%), Postives = 172/246 (69.92%), Query Frame = 1
Query:    1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLAD-QPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL-------SVLDGSSEAMSEFLSRLPEETEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
            ++ETG   MDRV+L+R IG+QTGGVY T L   +   GG +A    +  YLFLRGKAV+ K P++L I+  V+T+A LDSQQR +E+LKE+KARL +SI GSGHS+A+ R+E+RYT++GYL E+ GG++ V TVK +L  AE+DWP +L RL+++RA+++++   L        VLD ++ A+S F++ +P   EG  +++   AE   L+  ++EGF V TQVNYV KGG L+ PGEVVPG   V
Sbjct:  658 LLETGAGSMDRVELTRHIGTQTGGVYCTSLTGTKMGGGGVIASSDDVVGYLFLRGKAVSAKTPELLDIVRTVVTEARLDSQQRAIEILKETKARLDASIVGSGHSYASMRIESRYTLEGYLNEISGGISSVETVKSVLKMAEDDWPALLARLEKIRASIVTRNNLLINLTGDQEVLDAAAPAISNFINSIPGAGEGVVSHSNWAAE-ANLIPARNEGFAVQTQVNYVGKGGRLFQPGEVVPGSFQV 902          
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8U1_9STRA)

HSP 1 Score: 207 bits (526), Expect = 9.950e-58
Identity = 113/247 (45.75%), Postives = 160/247 (64.78%), Query Frame = 1
Query:    1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQP-SAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL-------SVLDGSSEAMSEFLSRLPEETEGAATNTAPLAEQV-KLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
            + + GTSE+DRV L R+IG+ TGG+ A+F  DQ  ++GG V+DP  +  +LF+RGK V  K+  +  ++ D++ DA LD+QQRV+E+LK+S A   SS+  SGHSFA +RL+ARYT   Y+ E+ GG++Y+ T+K + ++AE DWP +L RL+ +R  LLSK   L        VLD + E M+ F+ ++P      +   AP   +V  LL  ++E FVVPTQVNYV KGG L  PGE V G A V
Sbjct:  664 LKDVGTSELDRVALDRKIGTHTGGISASFSVDQGYTSGGKVSDPSDVNGHLFVRGKCVVSKIDMLFGLVNDILADAELDNQQRVLELLKQSMAGYQSSVLSSGHSFAASRLDARYTTSDYIDEMTGGISYIETLKTLTEQAEKDWPSLLARLEGIRDKLLSKAGMLINLTADQEVLDAAKEPMASFIGKVP------SREVAPQRWEVGSLLPVENEAFVVPTQVNYVGKGGRLVEPGEAVSGSAQV 904          
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Metalloenzyme, (LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGW9_9STRA)

HSP 1 Score: 201 bits (512), Expect = 7.120e-56
Identity = 112/247 (45.34%), Postives = 160/247 (64.78%), Query Frame = 1
Query:    1 MMETGTSEMDRVQLSRRIGSQTGGVY-ATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFL-------SVLDGSSEAMSEFLSRLPEETEGAA-TNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
            ++E+G    DRV+LSR I + TGGVY +T    +  A GAVA P  +  YLFLRGKAV+ K P++LSI+  V+ +A LDSQQR VE+LKE KARL +S+ GSGHSFA TR+++R+ ++ YL E+ GG++ + TVK  L  AE DWP +L RL+ +RA +  +   +        VLD + + + +F++ +PE     A  + A  A++ +    ++EGF+VPTQVNYV KGG L+ PGE  PG   V
Sbjct:  593 LLESGAGARDRVELSRHINTHTGGVYCSTVTGTRAGANGAVAAPDDVVGYLFLRGKAVSAKTPELLSIIRSVVREARLDSQQRAVEILKEMKARLEASVVGSGHSFAATRIDSRHALEPYLNEIGGGLSSLATVKANLAAAEEDWPALLARLEELRAAIFKRDNLIINLTGDQGVLDAAEQPVRDFIASMPESASVLAPASGAGWAKEAQFSPIRNEGFIVPTQVNYVGKGGRLFEPGEKAPGSFQV 839          
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Hypothetical (protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFS8_9STRA)

HSP 1 Score: 197 bits (500), Expect = 3.860e-54
Identity = 115/263 (43.73%), Postives = 159/263 (60.46%), Query Frame = 1
Query:    1 MMETGTSEMDRVQLSRRIGSQTGG----VYATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKK-----QFL------SVLDGSSEAMSEFLSRLPEETEGAATN----------TAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
            M + G  E+  ++LSR+IG+ TGG    ++ T +  +    G V+D   +   L L+GKA  DK+ ++ SI   ++T ANLDSQ++V+EMLKESK+ L S IQGSGHSFANTR+ +RYT  GY+ E   G+TY+N+VK ML+EAE DWP  L RL+++R T+L  +      FL      +V+DG    +  FL  LP + +G+A            T    E VK     DEGFVVPTQV+YV KGG L+  GE VP  ++V
Sbjct:  686 MKDNGAGELSDIELSRKIGTHTGGAGVGLFTTTIRSETEEEGTVSDGNHMLTKLTLQGKATTDKIDELFSIFSLMLTKANLDSQKKVIEMLKESKSGLESGIQGSGHSFANTRMSSRYTPAGYIDEKMSGITYLNSVKIMLEEAEKDWPTFLARLEKMRDTILDNETCRNGMFLDITGEKAVMDGIQSNVESFLENLPGDAKGSALIDFHNEEHPWLTQAKTEMVKNAPIADEGFVVPTQVSYVGKGGKLFDVGEKVPASSAV 948          
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9I1_9STRA)

HSP 1 Score: 186 bits (473), Expect = 4.590e-52
Identity = 112/252 (44.44%), Postives = 153/252 (60.71%), Query Frame = 1
Query:    1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLAD---QPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAMSE-------FLSRLPEET--EGAATNTAPLAE--QVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
            ++E GT++ D   L+RRIG  TGGV +  L D    P   G   +   +  YLFLRGKAV DKV ++ +IM D++TD NLD Q RV+EML+E+KA + SSI  SGH+FA +RL A  T  G L E  GGVTY+NTV+++L++AEN+WP +L RLQ+++ TLL+    +  L G  E +S        F + LP++   + AA  + P  +   V  L    EG VVPTQVNYV   G +Y PG+ V   A V
Sbjct:  168 LLECGTNKEDETTLTRRIGRHTGGVRSAILRDLVEHPE--GKCVEGDEIVHYLFLRGKAVPDKVSELFAIMKDILTDVNLDRQSRVIEMLRETKASMESSIVTSGHAFAASRLAAHDTGFGVLREQTGGVTYLNTVRELLEQAENEWPSLLSRLQKIQETLLNSNTLVVNLTGDKEVLSASVPVAETFATDLPKKASVDVAADRSVPTLDLRDVPRLPAVSEGLVVPTQVNYVGMAGRIYQPGDAVDSSAFV 417          
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMW9_9STRA)

HSP 1 Score: 190 bits (482), Expect = 9.190e-52
Identity = 112/252 (44.44%), Postives = 155/252 (61.51%), Query Frame = 1
Query:    1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLAD--QPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLSVLDGSSEAMSE-------FLSRLPEE-----TEGAATNTAPLAEQVKLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
            ++E GT  MD   ++RRIG+ TGGV A  L D  +  AG AVA    +  YLFLRGKAV DK+P++ SI  D+ TD NLD Q RV+EML+E++A + SS+  SGHS+A TRL AR T  G L E  GG++Y+ TVK++L++AENDWP +L RL+ ++  ++     +  L G  E +         F + LP++      EG  T T  L+  ++ L + DEG VVPTQVNYV   G +Y  GE VP  ++V
Sbjct:  611 LLECGTKSMDETAMTRRIGTHTGGVRAALLRDLVEDPAGAAVAGD-EIVHYLFLRGKAVPDKIPELFSIFKDIFTDVNLDRQSRVLEMLRETRASMESSVVTSGHSYAATRLAARTTGLGVLREKVGGISYLETVKELLEQAENDWPALLARLEAIQKKIVDADALIVNLTGDKEVLGSATPVAESFAAGLPKQGKVAFPEGRTTRTVDLS-GMERLPDVDEGLVVPTQVNYVGMAGRIYETGEKVPMSSAV 860          
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYW5_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.850e-51
Identity = 112/263 (42.59%), Postives = 162/263 (61.60%), Query Frame = 1
Query:    1 MMETGTSEMDRVQLSRRIGSQTGGV----YATFLADQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLS--VLDGSSE---------AMSEFLSRLPEETEGA------ATNTAPLAEQVKLLQE----KDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
            M +TG  E   V L RRIG+ TGGV      T +  + +A  AV +       +F+RGKA +DKV ++ SI   ++TDANLDSQ +VVEMLKE++ RL +S+Q +GHS+ N RL AR++V GY+GE   G+TY+ +VK++L +AE DWP +L RL+++R+T+L +    +  VLD + +         ++ +FL+ +P +   A      A     +AE  K + E     DEGFVVPTQV+YV KGG LY PGE V G ++V
Sbjct:  136 MTDTGAGEYSDVALQRRIGTHTGGVDVDNMITGVKKEGAAQDAVGEGKHFVSKMFIRGKATSDKVDELFSIFNLILTDANLDSQSKVVEMLKETRTRLEASVQSAGHSYCNMRLSARHSVPGYIGEKMSGLTYLESVKEILKQAEEDWPALLARLEKIRSTILDETSCRAGMVLDITGDKNVLTKIQPSVDKFLNEIPGKPSEAKYHDFYAEEHPWVAEAEKEMNEIVPLDDEGFVVPTQVSYVGKGGLLYEPGESVSGSSTV 398          
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MIS0_9STRA)

HSP 1 Score: 189 bits (480), Expect = 1.940e-51
Identity = 110/264 (41.67%), Postives = 160/264 (60.61%), Query Frame = 1
Query:    1 MMETGTSEMDRVQLSRRIGSQTGGVYATFLA----DQPSAGGAVADPGALKQYLFLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQGSGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKRLQRVRATLLSKKQFLS-----------VLDGSSEAMSEFLSRLP------EETEGAATNTAPLAEQVKLLQEK-----DEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV 714
            ++ETG  ++  VQLSRR+G  TGG+ A+ L     ++     A +D   +   LFLRGK+ ADK  ++ S+   ++TDANLDS +++VE+L+E+K R+ SS+Q +GHS+ANTRL +RYT  GY+GE  GG+TY++TVK++LD AENDWP +L RL+ +R+ LL + +              V++  +  +  FLS LP      E+ +   +   P   Q K          DEGFVVPTQV+YV KGG +Y  GE V G  +V
Sbjct:  705 LLETGAGDLSDVQLSRRMGIHTGGISASTLMVPVFEEGQDESAASDGTKMITKLFLRGKSTADKAGELFSLYNLILTDANLDSPKKIVEILRETKTRMESSVQSAGHSYANTRLASRYTPSGYIGEKMGGITYLDTVKELLDAAENDWPSVLARLEGIRSALLKQTKCRDGMILDITGDKRVMETIAPEVESFLSNLPGDAAPSEKFQDFYSEDHPWVTQAKSEMSAAAPLVDEGFVVPTQVSYVGKGGKIYEAGEHVSGSTAV 968          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8697.16874.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Zn-dependent3.880e-14792.86peptidase (Partial) (Fragment) n=1 Tax=Ectocarpus ... [more]
M16C_associated4.530e-14594.69domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Metalloenzyme,4.100e-6549.19LuxS/M16 peptidase-like protein n=1 Tax=Tribonema ... [more]
Hypothetical9.950e-5845.75protein (Fragment) n=1 Tax=Fibrocapsa japonica Tax... [more]
Metalloenzyme,7.120e-5645.34LuxS/M16 peptidase-like protein n=1 Tax=Tribonema ... [more]
Hypothetical3.860e-5443.73protein n=1 Tax=Eucampia antarctica TaxID=49252 Re... [more]
Hypothetical4.590e-5244.44protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1... [more]
Hypothetical9.190e-5244.44protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Hypothetical1.850e-5142.59protein n=1 Tax=Helicotheca tamesis TaxID=374047 R... [more]
Hypothetical1.940e-5141.67protein n=2 Tax=Odontella aurita TaxID=265563 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8697contigEcto-sp9_F_contig8697:1829..5229 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score422.5
Seed ortholog evalue1.3e-115
Seed eggNOG ortholog2880.D8LH12
KEGG koko:K06972
GOsGO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0010035,GO:0010038,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0031967,GO:0031974,GO:0031975,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0048046,GO:0050896,GO:0051604,GO:0070011,GO:0070013,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.metallopeptidase activity
EggNOG OGsCOG1026@1,KOG2019@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZn-dependent peptidase
Ec32 orthologEc-06_010810.1
Exons6
Model size714
Cds size714
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8697.16874.1prot_Ecto-sp9_F_contig8697.16874.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig8697 1829..5229 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930913.1242664-CDS-Ecto-sp9_F_contig8697:1828..18971622930913.1242664-CDS-Ecto-sp9_F_contig8697:1828..1897Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8697 1829..1897 -
1692278946.0863147-CDS-Ecto-sp9_F_contig8697:1828..18971692278946.0863147-CDS-Ecto-sp9_F_contig8697:1828..1897Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8697 1829..1897 -
1622930913.1414618-CDS-Ecto-sp9_F_contig8697:2229..23791622930913.1414618-CDS-Ecto-sp9_F_contig8697:2229..2379Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8697 2230..2379 -
1692278946.099675-CDS-Ecto-sp9_F_contig8697:2229..23791692278946.099675-CDS-Ecto-sp9_F_contig8697:2229..2379Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8697 2230..2379 -
1622930913.159311-CDS-Ecto-sp9_F_contig8697:3078..32351622930913.159311-CDS-Ecto-sp9_F_contig8697:3078..3235Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8697 3079..3235 -
1692278946.1101158-CDS-Ecto-sp9_F_contig8697:3078..32351692278946.1101158-CDS-Ecto-sp9_F_contig8697:3078..3235Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8697 3079..3235 -
1622930913.26023-CDS-Ecto-sp9_F_contig8697:3595..36601622930913.26023-CDS-Ecto-sp9_F_contig8697:3595..3660Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8697 3596..3660 -
1692278946.1230633-CDS-Ecto-sp9_F_contig8697:3595..36601692278946.1230633-CDS-Ecto-sp9_F_contig8697:3595..3660Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8697 3596..3660 -
1622930913.297067-CDS-Ecto-sp9_F_contig8697:4325..44331622930913.297067-CDS-Ecto-sp9_F_contig8697:4325..4433Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8697 4326..4433 -
1692278946.133303-CDS-Ecto-sp9_F_contig8697:4325..44331692278946.133303-CDS-Ecto-sp9_F_contig8697:4325..4433Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8697 4326..4433 -
1622930913.3255239-CDS-Ecto-sp9_F_contig8697:5064..52291622930913.3255239-CDS-Ecto-sp9_F_contig8697:5064..5229Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8697 5065..5229 -
1692278946.1424098-CDS-Ecto-sp9_F_contig8697:5064..52291692278946.1424098-CDS-Ecto-sp9_F_contig8697:5064..5229Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig8697 5065..5229 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig8697.16874.1

>prot_Ecto-sp9_F_contig8697.16874.1 ID=prot_Ecto-sp9_F_contig8697.16874.1|Name=mRNA_Ecto-sp9_F_contig8697.16874.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=238bp
MMETGTSEMDRVQLSRRIGSQTGGVYATFLADQPSAGGAVADPGALKQYL
FLRGKAVADKVPDMLSIMFDVMTDANLDSQQRVVEMLKESKARLASSIQG
SGHSFANTRLEARYTVDGYLGELQGGVTYVNTVKDMLDEAENDWPKMLKR
LQRVRATLLSKKQFLSVLDGSSEAMSEFLSRLPEETEGAATNTAPLAEQV
KLLQEKDEGFVVPTQVNYVVKGGPLYTPGEVVPGQASV
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mRNA from alignment at Ecto-sp9_F_contig8697:1829..5229-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig8697.16874.1 ID=mRNA_Ecto-sp9_F_contig8697.16874.1|Name=mRNA_Ecto-sp9_F_contig8697.16874.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3401bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8697:1829..5229- (Ectocarpus species9 EcSCA_722f female)
ATGATGGAGACCGGCACCTCGGAGATGGACCGCGTGCAGCTTTCCCGCCG CATCGGCAGCCAGACGGGAGGCGTTTACGCGACCTTCCTGGCCGACCAAC CCTCGGCCGGCGGCGCGGTGGCGGACCCCGGGGCACTGAAGCAGTACCTG TTCCTCCGCGGAAAGGTATGGGGGGGAGGGGGGGGGTGCTCATGTACACG CATGCCGTTGAAGTCGTTTAGACCATTGGCCTCTCATCCCACAATGCGAG AACGGAACGAGAAAGGTACAATAGGGGGAGTTCTTTTGTGTTCTTTTCGT CGACCGACCGCGCTAACCGACTGCCCAATGTAGCGGCCGAAGAATAGAAA CAGCTTCTAGAAGGCCATGTTCTGGGAAACCCGTGAGAGAGGGTTCATGG GGGAGGCTAGGGTATTCTCGGGATTGGAGGCAGATACGGCAGCAGATGGA CTTGTGTTGTAGCGTCTGCGCTTGTCTGATTTCTCCTGGGCGGATTCACG GACACCGTATCGTATCGTTGCTATTGGTCTGCCTGTCTGGACAAACCCAA GTATTGCTGTCATCGGGATGTCAACACGAGGTGTAATTTAGCTGGAATGG TGGGTGGGAGAAATGCCGGGACCACGAGTACGAAAGGTGTTGACCGTAGC ACCTACCCTGCTCACGAGGGGCGTGTTGTTTGTTGGTGGTGGACCTGTCG ACTGCTGAACTGTACGCTCTTCTTTGTCCAACCATGTCCGACCCAACCCA TCACAACCAATCAATCCGACCCATTCGAATTCGAACACGGAATCAGGCCG TCGCGGACAAGGTACCCGACATGCTCTCCATCATGTTCGACGTCATGACG GACGCTAACCTTGACAGCCAGCAGAGGGTCGTGGAGATGCTCAAGGAGTC TAAGGTGCCTGTGCATCATGATGCATCATGATGAGATGGCGTTTCGCAGG GCGTGTAGGGTAGGTGCAGATGCCCCAAGTTGACGCGTGTTCAATGCCTT GTTGGCGATAAAAGCCCCACAGAAGAGCAGGAGGGATGATTCTCTGGTTC TTTGAAGTAGGAGCTTCCGATACCGATCCACGCAAGACTCGTGTGGTACA TGACTATACATGATTTGCTTGCAGTAGTTCTTTTTGGCGTGCTTATTTTG AAGTATTTTTAAGGTTCCTTCCATTTCTGGTTGTGTGTAAGTGTAAGTGC GTACAATATAGGCGTGTTGCGTTGACACTCCTTTTTGCCCCTGTGTGTGT GTCTCTATAGCAAAGTGCTCGCACGTGGGCTCCAGCTCCAGTGTGTTGTG TTGTTGTGTTGCTTTCTATTTTTTTTTTTTGGCGTCATGTTGCCCGGTAT CCCCATATGTGAGATTTGCTTGTAATGATCGCCTTTTCCTCCCCTGCGTG TTGCTGCTGACTACTTTGTGCGTCACCACGGTTCTCCTGTATGCCTTCAT GCTAATCTGTGACTGCTGTGTGACTTTTTGTATACCTGCTGTGTGACTGT GACTGCCTTCTCTCTCTCTCTTTCTCTGTTGTGTTTTTTTGCATTTTTTC GTTTATATTCCGAGGGCAGGCCCGTCTTGCGTCGTCGATCCAGGGATCTG GACACTCGTTCGCGAACACACGCCTCGAGGCCAGGTGATGATGATGGCGT CACGGATTCAATAGCAATACTTGTCTTCGACGTATGGTTTTTTGAGGTGC GTTTGATGACCCAGCCTCAGCAAAGAGCCAACCACGCCGAGCAAGAAAGC AAAGTCCCCTGTCAGCCAATCGTGTCCTCCCTTGCCCATCGACATTTATC ATTATCGCATAGGCACGGGATTGATTTGCTTTCAAGCAGGTTATCTGTCA TCGCGAACCACGCTTTACTTGAACGGTTTCCTAAGGCGAGCAGTGGAGCA CATCACATGCACCCCGCTCTTCAAGACCACTTTTTTTCAGATCTTTGACC CCCCCCTCCCCCCCCTCGTCTCTTGGCTGTTGCACCAAAAATAGGTACAC CGTGGACGGGTACCTGGGCGAGCTCCAGGGGGGAGTGACGTACGTGAACA CGGTCAAGGACATGCTGGACGAGGCCGAAAACGACTGGCCCAAGATGCTC AAGCGCCTCCAGCGCGTCCGCGCCACCCTCCTGTCCAAGAAGCAGTTCCT GGTTAACCTTACGGGGGACAAGGTACGTCTGGGGTGGGCAGGTGGGGGGG GGGGGGCAGGGTTGATCGTTTTTTCGTCGGTAGTTTTGGCTCTGGGTGTG GGTGCTGTGGATAATGTCACGGTGCCCCCCCTATGAGTATAGAGGTGGAT GTTGCTGCTGCTGCTGTTCTCTTTGTCCCGCAAGGCTTGTCTTTCTGGCG TCTAGGAACTAAGGTGTGCTTGCTTGCTTGGCTGTTTGCTTGTTGCCGAC TGCGTGAGGGTCGGCGGGGAGCACCTTGTGGGACAGACAGACAGTACCAT GGCGCCGGAGAACGTTTGTGTCATTGGGGGCTGTGAACGATAGATGGACA AATAGTGCAGAATATCACCCTGTGACTGTCCACTCCTCCTACAGCTACAG TGCTGTAGATGGTCGTCGTGCATCTCACCGACGATGCCAGTCAGAATAGC ATTGTGCACGGGTACTGTATTGCCTTCCCAATAGCTGATACTACTCGGGA TCGTAGCAGACGCTGTGCCGCAGTCTTTTCGGTGTCGTACGCATTGCATC ATATCTGGTACTGCCTAGTATTCAACGCACAAGAGAAGACAATAGATACG TTCCAACGAATGTGAATCATGACAGCAGTACCCCGGCTCCTCATTTTTGT GCGCACGTGCTGTCCCCCCTCCTCCTCCCGTTTGTATTTATTACCATTAG TCTGTTTTGGACGGGTCTAGCGAGGCAATGTCGGAGTTCCTCTCCCGCCT TCCGGAGGAGACCGAGGGTGCCGCTACCAACACGGCTCCTCTGGCGGAGC AAGTGAAGCTGCTGCAGGAGAAGGACGAGGGCTTCGTCGTGCCGACTCAG GTAATGTCCCGTGATGCCGTGAAGCCGACAAGAGAAAGCTATCTTCGGGT AGTAAGTAGATCAAATGCGACTTTTAATTCTTTTCGGAATGATGCATATG CACACTCTAGAGGTAAGCTGCTGTTGTGTGTACGTGTTTCAGCAAATGGC GTCGTCCGCGCTACACCGGCTGGCCAATGAGAATGCTTCCTTCTCGACGG AGAGAGTCACGACGATGCGTGCGGTCCAATGGTCAAAACGACCTGCAGTA GGCAGCCAAGAGATAGTCCACGACGCTTCGCCCAACCGAGTATTGTATCT GCTCGTTTTTCGTGACAATGTTGACGAAAAAGGTGAACTACGTGGTTAAG GGCGGACCGCTCTACACCCCGGGGGAAGTCGTGCCTGGCCAGGCGTCGGT C
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig8697:1829..5229-

>mRNA_Ecto-sp9_F_contig8697.16874.1 ID=mRNA_Ecto-sp9_F_contig8697.16874.1|Name=mRNA_Ecto-sp9_F_contig8697.16874.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1428bp|location=Sequence derived from alignment at Ecto-sp9_F_contig8697:1829..5229- (Ectocarpus species9 EcSCA_722f female)
ATGATGGAGACCGGCACCTCGGAGATGGACCGCGTGCAGCTTTCCCGCCG
CATCGGCAGCCAGACGGGAGGCGTTTACGCGACCTTCCTGGCCGACCAAC
CCTCGGCCGGCGGCGCGGTGGCGGACCCCGGGGCACTGAAGCAGTACCTG
TTCCTCCGCGGAAAGATGATGGAGACCGGCACCTCGGAGATGGACCGCGT
GCAGCTTTCCCGCCGCATCGGCAGCCAGACGGGAGGCGTTTACGCGACCT
TCCTGGCCGACCAACCCTCGGCCGGCGGCGCGGTGGCGGACCCCGGGGCA
CTGAAGCAGTACCTGTTCCTCCGCGGAAAGGCCGTCGCGGACAAGGTACC
CGACATGCTCTCCATCATGTTCGACGTCATGACGGACGCTAACCTTGACA
GCCAGCAGAGGGTCGTGGAGATGCTCAAGGAGTCTAAGGCCGTCGCGGAC
AAGGTACCCGACATGCTCTCCATCATGTTCGACGTCATGACGGACGCTAA
CCTTGACAGCCAGCAGAGGGTCGTGGAGATGCTCAAGGAGTCTAAGGCCC
GTCTTGCGTCGTCGATCCAGGGATCTGGACACTCGTTCGCGAACACACGC
CTCGAGGCCAGGCCCGTCTTGCGTCGTCGATCCAGGGATCTGGACACTCG
TTCGCGAACACACGCCTCGAGGCCAGGTACACCGTGGACGGGTACCTGGG
CGAGCTCCAGGGGGGAGTGACGTACGTGAACACGGTCAAGGACATGCTGG
ACGAGGCCGAAAACGACTGGCCCAAGATGCTCAAGCGCCTCCAGCGCGTC
CGCGCCACCCTCCTGTCCAAGAAGCAGTTCCTGGTACACCGTGGACGGGT
ACCTGGGCGAGCTCCAGGGGGGAGTGACGTACGTGAACACGGTCAAGGAC
ATGCTGGACGAGGCCGAAAACGACTGGCCCAAGATGCTCAAGCGCCTCCA
GCGCGTCCGCGCCACCCTCCTGTCCAAGAAGCAGTTCCTGTCTGTTTTGG
ACGGGTCTAGCGAGGCAATGTCGGAGTTCCTCTCCCGCCTTCCGGAGGAG
ACCGAGGGTGCCGCTACCAACACGGCTCCTCTGGCGGAGCAAGTGAAGCT
GCTGCAGGAGAAGGACGAGGGCTTCGTCGTGCCGACTCAGTCTGTTTTGG
ACGGGTCTAGCGAGGCAATGTCGGAGTTCCTCTCCCGCCTTCCGGAGGAG
ACCGAGGGTGCCGCTACCAACACGGCTCCTCTGGCGGAGCAAGTGAAGCT
GCTGCAGGAGAAGGACGAGGGCTTCGTCGTGCCGACTCAGGTGAACTACG
TGGTTAAGGGCGGACCGCTCTACACCCCGGGGGAAGTCGTGCCTGGCCAG
GCGTCGGTCGTGAACTACGTGGTTAAGGGCGGACCGCTCTACACCCCGGG
GGAAGTCGTGCCTGGCCAGGCGTCGGTC
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