mRNA_Ecto-sp9_F_contig12404.1902.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig12404.1902.1
Unique NamemRNA_Ecto-sp9_F_contig12404.1902.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
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BLAST of mRNA_Ecto-sp9_F_contig12404.1902.1 vs.
Match: Glucose-6-phosphate (isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQV8_ECTSI)

HSP 1 Score: 423 bits (1087), Expect = 1.970e-144
Identity = 215/216 (99.54%), Postives = 215/216 (99.54%), Query Frame = 1 
Query:    4 DMLFNLAEAADLAGKRAAMFTGEKINNTEGRAVMHVALRAPREATMNVDGKNVVPDVHSVLDKIEDFSARVRSGVFKGCTGKPLRNIVSIGIGGSYLGPEFVFEALKCEPAAQGASTGRTLRFLANVDPVDVSRAISGLNPEETLVVVVSKTFTTAETMLNARTMKDWLITSIKGKTAAEITSQHIVAVSTSDKLVQDFGVDAANIFGFWDWVGGR 651
            DMLFNLAEAADLAGKRAAMFTGEKINNTEGRAVMH ALRAPREATMNVDGKNVVPDVHSVLDKIEDFSARVRSGVFKGCTGKPLRNIVSIGIGGSYLGPEFVFEALKCEPAAQGASTGRTLRFLANVDPVDVSRAISGLNPEETLVVVVSKTFTTAETMLNARTMKDWLITSIKGKTAAEITSQHIVAVSTSDKLVQDFGVDAANIFGFWDWVGGR
Sbjct:   59 DMLFNLAEAADLAGKRAAMFTGEKINNTEGRAVMHAALRAPREATMNVDGKNVVPDVHSVLDKIEDFSARVRSGVFKGCTGKPLRNIVSIGIGGSYLGPEFVFEALKCEPAAQGASTGRTLRFLANVDPVDVSRAISGLNPEETLVVVVSKTFTTAETMLNARTMKDWLITSIKGKTAAEITSQHIVAVSTSDKLVQDFGVDAANIFGFWDWVGGR 274
[Close]
BLAST of mRNA_Ecto-sp9_F_contig12404.1902.1 vs.
Match: Glucose-6-phosphate (isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9A9_9STRA)

HSP 1 Score: 334 bits (856), Expect = 2.570e-109
Identity = 168/217 (77.42%), Postives = 185/217 (85.25%), Query Frame = 1 
Query:    4 DMLFNLAEAADLAGKRAAMFTGEKINNTEGRAVMHVALRAPREATMNVDGKNVVPDVHSVLDKIEDFSARVRSGVFKGCTGKPLRNIVSIGIGGSYLGPEFVFEALKCEPAAQGASTGRTLRFLANVDPVDVSRAISGLNPEETLVVVVSKTFTTAETMLNARTMKDWLITSIKGKTAAE-ITSQHIVAVSTSDKLVQDFGVDAANIFGFWDWVGGR 651
            DMLFNL EAADL GKRAAMF GEKIN TEGRAV HVALRAPR+ATM VDGKNV+PDVH VLD+I DF+ RVRSG FKGCTGKPLRN+VS+GIGGSYLGPEFV+EAL+ +  A   + GR LRFLANVDPVD  RA+ GL+PEETLVVVVSKTFTTAETMLNART+KDWL++ +KGK   E IT  HIVAVSTS +  Q FGVDAANIFGFWDWVGGR
Sbjct:   60 DMLFNLCEAADLEGKRAAMFGGEKINTTEGRAVFHVALRAPRDATMCVDGKNVIPDVHEVLDRIGDFATRVRSGEFKGCTGKPLRNVVSVGIGGSYLGPEFVYEALRTDKEAAVQAAGRRLRFLANVDPVDAKRALEGLDPEETLVVVVSKTFTTAETMLNARTLKDWLVSHLKGKATTEAITKSHIVAVSTSVEKCQAFGVDAANIFGFWDWVGGR 276
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BLAST of mRNA_Ecto-sp9_F_contig12404.1902.1 vs.
Match: Glucose-6-phosphate (isomerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVY6_9STRA)

HSP 1 Score: 295 bits (754), Expect = 3.690e-94
Identity = 149/216 (68.98%), Postives = 174/216 (80.56%), Query Frame = 1 
Query:    4 DMLFNLAEAADLAGKRAAMFTGEKINNTEGRAVMHVALRAPREATMNVDGKNVVPDVHSVLDKIEDFSARVRSGVFKGCTGKPLRNIVSIGIGGSYLGPEFVFEALKCEPAAQGASTGRTLRFLANVDPVDVSRAISGLNPEETLVVVVSKTFTTAETMLNARTMKDWLITSIKGKTAAEITSQHIVAVSTSDKLVQDFGVDAANIFGFWDWVGGR 651
            D L +LA AA L  KRAAMF+GEKIN TEGRAV+HVALRA R AT+ VDG N VP VH VLD I+DFS RV +G F G TGK L+NI+SIGIGGSYLGPEFV+EA+KC P A   + GRTLRFLANVDPVDV+RA  GLNPEETLVVVVSKTFTTAETMLNART++ WL+  +KG    E+  +H+VA S++  LV +FG+D+AN+FGFWDWVGGR
Sbjct:   60 DFLMDLAGAAMLEEKRAAMFSGEKINVTEGRAVLHVALRAERSATILVDGVNQVPLVHDVLDHIKDFSHRVLTGTFVGATGKSLKNIISIGIGGSYLGPEFVYEAIKCVPQAAEVAEGRTLRFLANVDPVDVARATKGLNPEETLVVVVSKTFTTAETMLNARTLRKWLLDGVKGTGPEEVIRRHMVAASSAVPLVTEFGIDSANVFGFWDWVGGR 275
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BLAST of mRNA_Ecto-sp9_F_contig12404.1902.1 vs.
Match: Glucose-6-phosphate (isomerase n=45 Tax=Peronosporaceae TaxID=4777 RepID=H3G8D0_PHYRM)

HSP 1 Score: 290 bits (741), Expect = 2.800e-92
Identity = 146/218 (66.97%), Postives = 178/218 (81.65%), Query Frame = 1 
Query:    4 DMLFNLAEAADLAGKRAAMFTGEKINNTEGRAVMHVALRAPREATMNVDGKNVVPDVHSVLDKIEDFSARVRSGVFKGCTGKPLRNIVSIGIGGSYLGPEFVFEALKCEPAAQGASTGRTLRFLANVDPVDVSRAISGLNPEETLVVVVSKTFTTAETMLNARTMKDWLITSIKGKTAAEI--TSQHIVAVSTSDKLVQDFGVDAANIFGFWDWVGGR 651
            D+LF LAEAA+L  K AA+ +GE +N TE RAVMH+ALRAP+   + VDG +VVPDVH+VLD I  FSA+VR G F G TGK L+N++SIGIGGSYLGPEFVFEAL+ EP A+ A+ GR+LRFLANVDPVDV+RA SGLNPEETLVVVVSKTFTTAETMLNART++ WL+  +  K  +E+   ++H+VA S++  LVQ+FG+D ANIFGFWDWVGGR
Sbjct:   58 DLLFELAEAAELKKKLAAIASGEHVNVTEDRAVMHMALRAPKTQQILVDGHDVVPDVHAVLDAISAFSAKVRGGQFVGATGKQLKNVISIGIGGSYLGPEFVFEALRQEPVAKAAAEGRSLRFLANVDPVDVARATSGLNPEETLVVVVSKTFTTAETMLNARTLRKWLVDDLTKKGCSEVDAVAKHVVAASSAVPLVQEFGIDRANIFGFWDWVGGR 275
[Close]
BLAST of mRNA_Ecto-sp9_F_contig12404.1902.1 vs.
Match: Glucose-6-phosphate (isomerase (Fragment) n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812JWV1_9DINO)

HSP 1 Score: 278 bits (710), Expect = 1.570e-91
Identity = 137/214 (64.02%), Postives = 173/214 (80.84%), Query Frame = 1 
Query:   10 LFNLAEAADLAGKRAAMFTGEKINNTEGRAVMHVALRAPREATMNVDGKNVVPDVHSVLDKIEDFSARVRSGVFKGCTGKPLRNIVSIGIGGSYLGPEFVFEALKCEPAAQGASTGRTLRFLANVDPVDVSRAISGLNPEETLVVVVSKTFTTAETMLNARTMKDWLITSIKGKTAAEITSQHIVAVSTSDKLVQDFGVDAANIFGFWDWVGGR 651
            LF+LA+ AD+ GK+  +F GEKIN TEGRAV+HVALRAP+E T+NVDGKNVVP+VHSVLD I+ FS +VRSG F G TGK L +++ IGIGGSYLG EFV+EAL+ +  A  A+ GR+LRFLANVDP+DV RA++GLN E TLVVV+SKTFTTAETMLNART+KDWL+  +  + A    ++H++A ST+    + FG+D+AN+FGFWDWVGGR
Sbjct:    4 LFDLAKVADVEGKKKRLFAGEKINETEGRAVLHVALRAPKEETINVDGKNVVPEVHSVLDAIKAFSDKVRSGSFVGHTGKKLTDVLCIGIGGSYLGVEFVYEALRTDSTASAAAKGRSLRFLANVDPIDVKRALTGLNAETTLVVVISKTFTTAETMLNARTVKDWLVKELGTEAAI---AKHVIACSTALDKTKAFGIDSANVFGFWDWVGGR 214
[Close]
BLAST of mRNA_Ecto-sp9_F_contig12404.1902.1 vs.
Match: Glucose-6-phosphate (isomerase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXX3_9STRA)

HSP 1 Score: 290 bits (741), Expect = 1.990e-91
Identity = 146/218 (66.97%), Postives = 179/218 (82.11%), Query Frame = 1 
Query:    4 DMLFNLAEAADLAGKRAAMFTGEKINNTEGRAVMHVALRAPREATMNVDGKNVVPDVHSVLDKIEDFSARVRSGVFKGCTGKPLRNIVSIGIGGSYLGPEFVFEALKCEPAAQGASTGRTLRFLANVDPVDVSRAISGLNPEETLVVVVSKTFTTAETMLNARTMKDWLIT--SIKGKTAAEITSQHIVAVSTSDKLVQDFGVDAANIFGFWDWVGGR 651
            D+LF+LA+AA+L  K AA+ +GE +N TE RAV+H+ALRAP + T+ VDG++V+ DVH VL  I+ F+  +RSG   G TGKP++NIVSIGIGGSYLGPE+VFEAL+ EPAAQ AS GRTLRFLANVDPVDV+RA SGLNPEETLV+VVSKTFTTAETMLNART++ WL+   S KG  AA+   +H+VA S++  LVQ+FG+D ANIFGFWDWVGGR
Sbjct:  166 DLLFDLADAAELRKKLAAIASGEHVNATEDRAVLHMALRAPADKTLVVDGQDVIKDVHEVLGAIKAFAGAIRSGAQLGSTGKPIKNIVSIGIGGSYLGPEYVFEALRYEPAAQAASAGRTLRFLANVDPVDVARATSGLNPEETLVIVVSKTFTTAETMLNARTLRKWLVDDLSAKGVAAADAIRKHMVAASSAVPLVQEFGIDRANIFGFWDWVGGR 383
[Close]
BLAST of mRNA_Ecto-sp9_F_contig12404.1902.1 vs.
Match: Glucose-6-phosphate (isomerase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WKH9_9STRA)

HSP 1 Score: 287 bits (735), Expect = 2.280e-91
Identity = 144/218 (66.06%), Postives = 180/218 (82.57%), Query Frame = 1 
Query:    4 DMLFNLAEAADLAGKRAAMFTGEKINNTEGRAVMHVALRAPREATMNVDGKNVVPDVHSVLDKIEDFSARVRSGVFKGCTGKPLRNIVSIGIGGSYLGPEFVFEALKCEPAAQGASTGRTLRFLANVDPVDVSRAISGLNPEETLVVVVSKTFTTAETMLNARTMKDWLITSI--KGKTAAEITSQHIVAVSTSDKLVQDFGVDAANIFGFWDWVGGR 651
            D+LF LAEAA+L  K AA+ +G  +N TE RAVMH+ALRAP+   + VDG++VVP+VH+VLD I  F+ +VRSG   G TGKPLRN++SIGIGGSYLGPEFVFEAL+ EP A+ A+ GRTLRFLANVDPVDV+RA +GL+PEETLVVVVSKTFTTAETMLNART++ WL+ ++  KG + A+  ++H+VA S++  LVQ+FG+D ANIFGFWDWVGGR
Sbjct:   59 DLLFELAEAAELKKKLAAIASGAHVNATEDRAVMHMALRAPKTKKIVVDGQDVVPEVHAVLDAIRAFTTKVRSGGALGATGKPLRNVISIGIGGSYLGPEFVFEALRYEPVAKAAAEGRTLRFLANVDPVDVARATNGLDPEETLVVVVSKTFTTAETMLNARTLRKWLVDALTSKGASEADAVAKHMVAASSAVPLVQEFGIDRANIFGFWDWVGGR 276
[Close]
BLAST of mRNA_Ecto-sp9_F_contig12404.1902.1 vs.
Match: Glucose-6-phosphate (isomerase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7CUT3_9STRA)

HSP 1 Score: 280 bits (716), Expect = 3.590e-91
Identity = 142/218 (65.14%), Postives = 171/218 (78.44%), Query Frame = 1 
Query:    4 DMLFNLAEAADLAGKRAAMFTGEKINNTEGRAVMHVALRAPREATMNVDGKNVVPDVHSVLDKIEDFSARVRSGVFKGCTGKPLRNIVSIGIGGSYLGPEFVFEALKCEPAAQGASTGRTLRFLANVDPVDVSRAISGLNPEETLVVVVSKTFTTAETMLNARTMKDWLITSI--KGKTAAEITSQHIVAVSTSDKLVQDFGVDAANIFGFWDWVGGR 651
            D+LF+LA+AA L  K AAM  GE IN TE RAVMH+ALR+P    + VDG NVV DVH VL  I  FS +VR+G   G TGK L N+VSIGIGGSYLGPE+VFEALK EP A+ A+ GRTLRFLANVDPVD +RAI GL+PE TLV++VSKTFTTAETMLNART++DWL++S+  KG +AA+   QHI+AVS +    + FG++AAN+FGFWDWVGGR
Sbjct:   60 DLLFDLADAAQLRQKLAAMAAGEHINTTEDRAVMHIALRSPANKPLYVDGVNVVDDVHHVLRNIRAFSDKVRTGAHVGATGKHLTNVVSIGIGGSYLGPEYVFEALKHEPVAKAAAAGRTLRFLANVDPVDAARAIEGLDPEHTLVIIVSKTFTTAETMLNARTLRDWLVSSLAKKGVSAADAIRQHIIAVSAAVPKAEAFGINAANVFGFWDWVGGR 277
[Close]
BLAST of mRNA_Ecto-sp9_F_contig12404.1902.1 vs.
Match: Glucose-6-phosphate (isomerase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BUY2_HYAAE)

HSP 1 Score: 284 bits (727), Expect = 3.420e-90
Identity = 141/218 (64.68%), Postives = 176/218 (80.73%), Query Frame = 1 
Query:    4 DMLFNLAEAADLAGKRAAMFTGEKINNTEGRAVMHVALRAPREATMNVDGKNVVPDVHSVLDKIEDFSARVRSGVFKGCTGKPLRNIVSIGIGGSYLGPEFVFEALKCEPAAQGASTGRTLRFLANVDPVDVSRAISGLNPEETLVVVVSKTFTTAETMLNARTMKDWLITSI--KGKTAAEITSQHIVAVSTSDKLVQDFGVDAANIFGFWDWVGGR 651
            ++L +LAEAA++  K  AM +GE IN+TE RAVMH+ALRAP+  ++ VDG +VVP VH VLD I  F+  VRSG F G TGKPL++++S+GIGGSYLGPEFVFEAL+ EP A+ A+ GRTLRFLANVDPVDV+RA SGL+PEETLVVVVSKTFTTAETMLNART++ W++  +  KG +  E  ++H+VA S++  LVQDFG+D  NIFGFWDWVGGR
Sbjct:   58 NLLLDLAEAAEVTKKLQAMASGEHINSTEDRAVMHMALRAPKTCSLLVDGHDVVPQVHQVLDNIRIFATNVRSGAFVGATGKPLKHVISVGIGGSYLGPEFVFEALRHEPVAKRAAAGRTLRFLANVDPVDVARATSGLDPEETLVVVVSKTFTTAETMLNARTLRKWIVDDLVAKGSSETEAVAKHMVAASSAVPLVQDFGIDRDNIFGFWDWVGGR 275
[Close]
BLAST of mRNA_Ecto-sp9_F_contig12404.1902.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFQ4_PYTOL)

HSP 1 Score: 282 bits (721), Expect = 3.080e-89
Identity = 142/218 (65.14%), Postives = 176/218 (80.73%), Query Frame = 1 
Query:    4 DMLFNLAEAADLAGKRAAMFTGEKINNTEGRAVMHVALRAPREATMNVDGKNVVPDVHSVLDKIEDFSARVRSGVFKGCTGKPLRNIVSIGIGGSYLGPEFVFEALKCEPAAQGASTGRTLRFLANVDPVDVSRAISGLNPEETLVVVVSKTFTTAETMLNARTMKDWLITSI--KGKTAAEITSQHIVAVSTSDKLVQDFGVDAANIFGFWDWVGGR 651
            D+LF+LA+ A+L  K AA+ +GE +N TE RAVMH+ALRAP    M VDGK+VVPDVH VL+ I+ FS  VRSG  KG TGK ++N++SIGIGGSYLGPE+VFEALK E  A+ A+ GRTLRFLANVDPVDV RA +GLNPEETLV+VVSKTFTTAETMLNART++ WL+  +  KG + A+  ++H+VA S++  LV++FG+D ANIFGFWDWVGGR
Sbjct:   62 DLLFDLADTANLKKKLAAIASGEHVNATEDRAVMHMALRAPANKKMLVDGKDVVPDVHEVLNAIKAFSDAVRSGEKKGSTGKVIKNVISIGIGGSYLGPEYVFEALKSEAVAKAAAAGRTLRFLANVDPVDVERATTGLNPEETLVIVVSKTFTTAETMLNARTLRKWLVDDLVAKGVSQADAVAKHMVAASSAVPLVEEFGIDKANIFGFWDWVGGR 279
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig12404.1902.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Glucose-6-phosphate1.970e-14499.54isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ... [more]
Glucose-6-phosphate2.570e-10977.42isomerase n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
Glucose-6-phosphate3.690e-9468.98isomerase n=2 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
Glucose-6-phosphate2.800e-9266.97isomerase n=45 Tax=Peronosporaceae TaxID=4777 RepI... [more]
Glucose-6-phosphate1.570e-9164.02isomerase (Fragment) n=1 Tax=Symbiodinium sp. CCMP... [more]
Glucose-6-phosphate1.990e-9166.97isomerase n=1 Tax=Pythium brassicum TaxID=1485010 ... [more]
Glucose-6-phosphate2.280e-9166.06isomerase n=2 Tax=Nothophytophthora sp. Chile5 Tax... [more]
Glucose-6-phosphate3.590e-9165.14isomerase n=1 Tax=Aphanomyces astaci TaxID=112090 ... [more]
Glucose-6-phosphate3.420e-9064.68isomerase n=1 Tax=Hyaloperonospora arabidopsidis (... [more]
Uncharacterized3.080e-8965.14protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig12404contigEcto-sp9_F_contig12404:101..2797 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score421.8
Seed ortholog evalue2e-115
Seed eggNOG ortholog2880.D8LQV8
Preferred namePGI
KEGG rclassRC00376,RC00563
KEGG koko:K01810
KEGG ReactionR02739,R02740,R03321
KEGG Pathwayko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00001,M00004,M00114
GOsGO:0002376,GO:0003674,GO:0003824,GO:0004347,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006955,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009605,GO:0009607,GO:0009620,GO:0009814,GO:0009817,GO:0009987,GO:0010035,GO:0010038,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042221,GO:0042866,GO:0043207,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045087,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046686,GO:0046700,GO:0046939,GO:0050832,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051707,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0098542,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576
EggNOG free text desc.glucose-6-phosphate isomerase activity
EggNOG OGsCOG0166@1,KOG2446@2759
EC5.3.1.9
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Hectar predicted targeting categoryother localisation
Exons5
Model size654
Cds size648
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig12404.1902.1prot_Ecto-sp9_F_contig12404.1902.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig12404 107..2797 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928508.1909301-UTR-Ecto-sp9_F_contig12404:100..1061622928508.1909301-UTR-Ecto-sp9_F_contig12404:100..106Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig12404 101..106 +
1692277896.780708-UTR-Ecto-sp9_F_contig12404:100..1061692277896.780708-UTR-Ecto-sp9_F_contig12404:100..106Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig12404 101..106 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928508.2114272-CDS-Ecto-sp9_F_contig12404:106..2351622928508.2114272-CDS-Ecto-sp9_F_contig12404:106..235Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig12404 107..235 +
1692277896.7929063-CDS-Ecto-sp9_F_contig12404:106..2351692277896.7929063-CDS-Ecto-sp9_F_contig12404:106..235Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig12404 107..235 +
1622928508.2754693-CDS-Ecto-sp9_F_contig12404:1046..11911622928508.2754693-CDS-Ecto-sp9_F_contig12404:1046..1191Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig12404 1047..1191 +
1692277896.8019307-CDS-Ecto-sp9_F_contig12404:1046..11911692277896.8019307-CDS-Ecto-sp9_F_contig12404:1046..1191Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig12404 1047..1191 +
1622928508.2902017-CDS-Ecto-sp9_F_contig12404:1627..17631622928508.2902017-CDS-Ecto-sp9_F_contig12404:1627..1763Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig12404 1628..1763 +
1692277896.8102381-CDS-Ecto-sp9_F_contig12404:1627..17631692277896.8102381-CDS-Ecto-sp9_F_contig12404:1627..1763Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig12404 1628..1763 +
1622928508.3090973-CDS-Ecto-sp9_F_contig12404:1962..21071622928508.3090973-CDS-Ecto-sp9_F_contig12404:1962..2107Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig12404 1963..2107 +
1692277896.8174405-CDS-Ecto-sp9_F_contig12404:1962..21071692277896.8174405-CDS-Ecto-sp9_F_contig12404:1962..2107Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig12404 1963..2107 +
1622928508.3281903-CDS-Ecto-sp9_F_contig12404:2704..27971622928508.3281903-CDS-Ecto-sp9_F_contig12404:2704..2797Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig12404 2705..2797 +
1692277896.824706-CDS-Ecto-sp9_F_contig12404:2704..27971692277896.824706-CDS-Ecto-sp9_F_contig12404:2704..2797Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig12404 2705..2797 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig12404.1902.1

>prot_Ecto-sp9_F_contig12404.1902.1 ID=prot_Ecto-sp9_F_contig12404.1902.1|Name=mRNA_Ecto-sp9_F_contig12404.1902.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=216bp
MLFNLAEAADLAGKRAAMFTGEKINNTEGRAVMHVALRAPREATMNVDGK
NVVPDVHSVLDKIEDFSARVRSGVFKGCTGKPLRNIVSIGIGGSYLGPEF
VFEALKCEPAAQGASTGRTLRFLANVDPVDVSRAISGLNPEETLVVVVSK
TFTTAETMLNARTMKDWLITSIKGKTAAEITSQHIVAVSTSDKLVQDFGV
DAANIFGFWDWVGGR*
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mRNA from alignment at Ecto-sp9_F_contig12404:101..2797+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig12404.1902.1 ID=mRNA_Ecto-sp9_F_contig12404.1902.1|Name=mRNA_Ecto-sp9_F_contig12404.1902.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2697bp|location=Sequence derived from alignment at Ecto-sp9_F_contig12404:101..2797+ (Ectocarpus species9 EcSCA_722f female)
CAGGACATGCTGTTCAACCTGGCGGAGGCCGCAGATCTCGCCGGTAAGCG
CGCGGCCATGTTCACCGGGGAGAAGATCAATAACACGGAGGGGAGGGCGG
TCATGCACGTCGCTCTGCGGGCCCCCAGGGAAGCGGTGAGATGCCCTTTT
TCTTGTTCATCAGTCATTCAGCGAATGTCAAAACTTAAAACATTCTAGCG
TTTGGGTTGCATTCCCTCCCTCAGGGTGTTGAGCCTCGGGTGGCGGTAAC
GAGACATAATTTGTAGTGTGTGAGCGTTACTGCTGTACCTACGGCAAGCG
GATGGGAAGGCCGCAACTGAGTACTGAGTACCCAAGAAGAAGGTGCCGTC
GTTTTCTGTCTAGGGTAACACACGGAACCCCCGTGAGGAGAAGGCTCCAC
ATTCCGGCTGGGCTACTTGCATGCAGTACTTGTACGGTCAACCTTGTACG
GTCAACCTCTTACCATCCCGTATTCACACCACATCCCGCAACACGGCCTG
AACTGTGTGGTTGTTATCATTATTTTTTCCGGCTGGGTTTCGCATCTAGC
AAGACCATAAAAACACGTTTCCATCTCCTCGTACGTTCTTAGACTCACAC
ATGGCGTTACCGATTTTGTTTTTTTTTATTTTTGGGGCGTTTGAGGTTCT
CGCTGGAGTGTTGAATTGGAAAACACGTGAGCAGTGTGAGCTTGGGACAC
CTCATACCGCAGCTGGCAACCAGCTCTGGAGTTGGTCCTGCGGCCTTTTT
TATGTAGATCTTGCATGATTGATGAAACTGCCGTGCTTTCAAGAGCCCAC
TCCGTCGGGATCACCTGCACTCTTTCTTCGCTTTCATAGTAGCGGTTGGT
CGGTATTGTGCCGGTCAACCTCTCTAGGCACGTACTCTACAAGCACTAAA
CAGCCCCCTCCCCATTTGTTTTTGTTTTTCTTCTTTTTGTGTACAGACCA
TGAACGTAGACGGCAAGAACGTCGTGCCGGACGTGCACTCTGTCCTGGAC
AAGATCGAGGACTTCTCGGCACGCGTCCGCTCCGGCGTGTTCAAGGGATG
CACCGGAAAGCCCCTCCGCAACATCGTCTCCATCGGTATCGGTAAGTCGG
TTAAGTGGCTTCGGCGTTGTTGGGCCAACCGTGTTTTTGGCGGGGGGGGG
CAAGAGACAAGTACCGTGGTTGGGATTCAGCGGGCGCAATCGGTGTTGTG
CACAGATTTCGCCGCCCCAGCCATTTGAGACCTGATTTTGTTTTTTTTCC
CGAGGCTTGCGTTCGTTTACATTATTGTTTTGACTTTTATTTTTCCTGTG
GTGTGATGTGTTGTTTGCAGGCAGGTCATACCTAGCCTGTGTTTGCAAAG
GAGGAAGTTTGTGATGTTGATGTTTTTTGCAGGCGGTTTGTACCTCGGCT
CCGTTGAACACAAGGGACTTTTCTTTTGCGAATAGTGATATTTCGCAGGC
GGCGGGTCGTACCTAGCCTGTGCTGACACAACGACATTTTTTTCTTTTTT
CTGTCATGTTATTGATGTTTTGTGCAGGCGGTTCATACCTAGGCCCGGAG
TTCGTGTTCGAGGCCCTCAAGTGCGAGCCGGCGGCCCAAGGCGCGTCGAC
GGGGAGGACCCTGAGGTTCTTGGCGAACGTCGACCCGGTGGACGTTAGCC
GTGCCATTTCCGGGTGAGCGAGGGAGTGAATGCCTCGTTTTTCACTCAGA
GAGGCGTTGTTTTCGACGACAGTGTTCATCTTGTGCGGATGTCCCGTTGG
TTAAAGACCTTCACAACGAGAGACGTTCGAAGAATGTGCCTCCCCTTTCT
CCAACGATACGCTTCTGCGTCTCTCTGTTCCCCCCCCCCCACAAACCCCG
GCTATGAAAAAGGCTTAACCCCGAGGAGACTTTGGTGGTCGTTGTGAGCA
AGACCTTCACCACGGCTGAGACCATGCTCAACGCCCGCACCATGAAGGAC
TGGCTCATCACCTCAATCAAGGGCAAGACCGCGGCGGAGATCACTAGCCA
GCACATCGTGAGTCCGCGCTCGGTGCCAGGCGGCAAACGATACACCTTTT
TTTGTTTGGTCTAGTTGATGGGACCACACTGGTTGCGTCTGGTATAGCCG
GGAAAAGCGCTGTTTTGTCAAGAGGGGGGTGGTTCTTGACGGGCCAGCAC
ACGCCATGGGCTTTTCTGCATCAGCATCAGCAGCACCAGCAGCAGCAGCT
GTTGTGTGTTGATCGTTTCGACGGTTGGGCGTGCCGCGTTGTTGCCGCAT
CATCAAGCTCGGGGGAGGCTGGGTTGAGGACGTTCATCTCGAGGACCAGA
AAACGAAGAAGCAGCTGTTGCACGCCCTCTTACGGTCTTGACTGTCGCCA
TCGTACCTGCCGCTGAAAACTTGTTGCCGTCTCCCTTTCCAACCAAGCCC
CACCGATCACCGTAGCCTTCCTACCCCCTTGCTTGCCCACACCTCAGCCT
TTTTCTGTGCCCCTACCGTCACCGTTGCAGGGAAGCGAGGTCAATGGTCT
AACGAGTACGGCATGCACGGGTATGAGTACACCTCCTCTACCTTCTCCCT
CCTACTGAGCGACAATTTTGCCGACGGAACCGCCGTCATCTCTTTGTTGT
TCAGGTTGCGGTGAGCACTAGCGACAAGCTGGTGCAGGACTTCGGAGTCG
ACGCGGCTAACATCTTCGGCTTCTGGGACTGGGTGGGCGGAAGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig12404:101..2797+

>mRNA_Ecto-sp9_F_contig12404.1902.1 ID=mRNA_Ecto-sp9_F_contig12404.1902.1|Name=mRNA_Ecto-sp9_F_contig12404.1902.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1296bp|location=Sequence derived from alignment at Ecto-sp9_F_contig12404:101..2797+ (Ectocarpus species9 EcSCA_722f female)
ATGCTGTTCAACCTGGCGGAGGCCGCAGATCTCGCCGGTAAGCGCGCGGC
CATGTTCACCGGGGAGAAGATCAATAACACGGAGGGGAGGGCGGTCATGC
ACGTCGCTCTGCGGGCCCCCAGGGAAGCGATGCTGTTCAACCTGGCGGAG
GCCGCAGATCTCGCCGGTAAGCGCGCGGCCATGTTCACCGGGGAGAAGAT
CAATAACACGGAGGGGAGGGCGGTCATGCACGTCGCTCTGCGGGCCCCCA
GGGAAGCGACCATGAACGTAGACGGCAAGAACGTCGTGCCGGACGTGCAC
TCTGTCCTGGACAAGATCGAGGACTTCTCGGCACGCGTCCGCTCCGGCGT
GTTCAAGGGATGCACCGGAAAGCCCCTCCGCAACATCGTCTCCATCGGTA
TCGACCATGAACGTAGACGGCAAGAACGTCGTGCCGGACGTGCACTCTGT
CCTGGACAAGATCGAGGACTTCTCGGCACGCGTCCGCTCCGGCGTGTTCA
AGGGATGCACCGGAAAGCCCCTCCGCAACATCGTCTCCATCGGTATCGGC
GGTTCATACCTAGGCCCGGAGTTCGTGTTCGAGGCCCTCAAGTGCGAGCC
GGCGGCCCAAGGCGCGTCGACGGGGAGGACCCTGAGGTTCTTGGCGAACG
TCGACCCGGTGGACGTTAGCCGTGCCATTTCCGGGCGGTTCATACCTAGG
CCCGGAGTTCGTGTTCGAGGCCCTCAAGTGCGAGCCGGCGGCCCAAGGCG
CGTCGACGGGGAGGACCCTGAGGTTCTTGGCGAACGTCGACCCGGTGGAC
GTTAGCCGTGCCATTTCCGGGCTTAACCCCGAGGAGACTTTGGTGGTCGT
TGTGAGCAAGACCTTCACCACGGCTGAGACCATGCTCAACGCCCGCACCA
TGAAGGACTGGCTCATCACCTCAATCAAGGGCAAGACCGCGGCGGAGATC
ACTAGCCAGCACATCGCTTAACCCCGAGGAGACTTTGGTGGTCGTTGTGA
GCAAGACCTTCACCACGGCTGAGACCATGCTCAACGCCCGCACCATGAAG
GACTGGCTCATCACCTCAATCAAGGGCAAGACCGCGGCGGAGATCACTAG
CCAGCACATCGTTGCGGTGAGCACTAGCGACAAGCTGGTGCAGGACTTCG
GAGTCGACGCGGCTAACATCTTCGGCTTCTGGGACTGGGTGGGCGGAAGG
TGAGTTGCGGTGAGCACTAGCGACAAGCTGGTGCAGGACTTCGGAGTCGA
CGCGGCTAACATCTTCGGCTTCTGGGACTGGGTGGGCGGAAGGTGA
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