mRNA_Ecto-sp9_F_contig123.1823.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig123.1823.1
Unique NamemRNA_Ecto-sp9_F_contig123.1823.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig123.1823.1 vs.
Match: Integrase (catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE)

HSP 1 Score: 1749 bits (4531), Expect = 0.000e+0
Identity = 983/1097 (89.61%), Postives = 1008/1097 (91.89%), Query Frame = 1 
Query:    7 VFLRRSLVRSKRELALAVCSRSQRGQAPLARLLAGASPRLVHSALPARTSDPADGGASGTAAGAARPEDSVRVAVSQLQEEMFRVLCEPRPSSPSLVALVRGMVAAGAQPSIEAVEALADHFSEAKDARSIKAVLSLLKGSKPGLTAVDPIGIMFSRLVRAHCRRQDVTSALAEVAEMEATGREVDVEVYSDLLHGCAIARPPLLVEVEAVWAHIQ-------------------------------ERGLTTRGGVQQDIFVDLMTTHANSAGYAPFGYNQQDQQQAPLEKVDEAWDGMLEALNEAASASTDPDRTVDEGGLVTPESWMARASSLALCVRDSGLISDAAMSRSMEAFRSYRRYGGSFASREDIFGLAEVVRGLARCGRQSEVEAIFSDLRQDAEKAERNASAVAASTTKTAVDKAKTRSAATRAARVFDELLRALGASGRGLDSGGRPYGLSLLQVVEDVATQAHACGDRSQGDVDSRLTATLQAVLTTSRFLDREDAASINKAIRTALDSAATAIASEVDERHSVEHLQDGGEPELRREWAGPNLAALSLLALLHVSQNRWEGIPAAIDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGFGHPRDNN-DDGDDGTAAEQEGDARRVVGVGEAIRGMVESSTTRGVDEWDAQEPLAASEKLANGGGGTQGNDEGSNSAGGTAAQPSAEQSYQLLRQRLREASLNGNASAGVRNVEQSCAAAVAAAAAELTKEAGRGLDRRHPSQAPTPGASESHRDILRRVTVLAERGRPHAALAALQAVDGRKRGTRVAVPYRVYALLFRALANGYSAQGWEELGLAAAPAEALQWLLRGMARQGYSAKTTALNFGLEAFAVAAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNIIVKVMCRLQMFDQAFEALEVMQRGGFEPDRFTFATLIHGLARAGDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGEAISFAQHAYNQYGCAPTARKFCRVVHAAAALDDGQHEARRAIVVAEQMWEGDWRGEGKTSHPVLGHANLRRLLKERGAFDQVNRL 3201
            +FLRRSLV SKRELALAVCSRSQRGQAPLARLLAGASPR VHSALPARTS P DGGASGTAAGAARPEDS+ VA SQLQEEMFRVLCEPRPSSPSLVALVRGMVAAGAQPSIEAVEALADHFSEAKDARSIKAVLSLLK SKPGLTAVDPIGIMFSRLVRAHCRRQDVTSALAEV EMEATGREVD+EVYSDLLHGCAIARPPLL EVEAVW HIQ                               ERGLTTRGGVQQD+FV LMTTHANSAGYA FG NQQDQQQ PLEKVDEAWDGMLEALN AASASTDPDRTVDEGGLVTPESWMARA++LALCVRDSGL+S AAMSRSM+AFRSYRRYGGSFASREDIFGLAEVVRGLARCGRQSEVEAI SDLRQDAEKAERNASAVAASTTKTAVDKAKTRSAATRAA VFDELLRALGA GRGLDSG R YGLSLL+VV+DVA QAHACG+RSQGDVDSRLTATLQAVLTTSRFLDREDA SINKAIRTALDSAA AIA+EV  RH VE LQ G EPELRREWAGPNLAALSLLALLHVSQNRWEGIPAAIDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGFG PRDNN DDG DGTAAEQEGDARRV  VG AIRGMV+SSTTRGV EWDAQEPL A+EK A+GGG TQGNDE S S G +AAQPSAEQSYQLLRQR REASLNGNAS GVRNVEQSCAAA  AAAAE+TK+AGRGLDRRHPSQAPTPGASESHRDILRRVTVLAERGRPHAALAALQAVDGRKRGTRV+VPYRVYALLFRALANGYSAQG EELGLAAAPAEALQWLLRGMARQGYSAKTT LNFGLEAFAVAAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNIIVKVMCRLQMFDQAFEALEVMQ GGFEPDRFTF+TLIHGLA+AGDN      XXXXXXXXXXXXXXXXXXXXXXXXXXXDVGEAISFAQHAYNQYGCAPTA K+CRVVHAAAAL+DGQHEARRAIVVAEQMWEG+WRGEGKTSHPVLGHANLRRLL+ERGAFDQVNRL
Sbjct: 1645 LFLRRSLVGSKRELALAVCSRSQRGQAPLARLLAGASPRQVHSALPARTSVPVDGGASGTAAGAARPEDSIEVATSQLQEEMFRVLCEPRPSSPSLVALVRGMVAAGAQPSIEAVEALADHFSEAKDARSIKAVLSLLKPSKPGLTAVDPIGIMFSRLVRAHCRRQDVTSALAEVVEMEATGREVDLEVYSDLLHGCAIARPPLLGEVEAVWTHIQVRAVPAHARVSQGALVRIATSLADHARSRYMERGLTTRGGVQQDLFVGLMTTHANSAGYALFGDNQQDQQQVPLEKVDEAWDGMLEALNVAASASTDPDRTVDEGGLVTPESWMARAAALALCVRDSGLVSGAAMSRSMDAFRSYRRYGGSFASREDIFGLAEVVRGLARCGRQSEVEAILSDLRQDAEKAERNASAVAASTTKTAVDKAKTRSAATRAALVFDELLRALGARGRGLDSGDRLYGLSLLRVVDDVAAQAHACGERSQGDVDSRLTATLQAVLTTSRFLDREDATSINKAIRTALDSAAAAIAAEVGGRHPVEDLQGGSEPELRREWAGPNLAALSLLALLHVSQNRWEGIPAAIDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGFGPPRDNNNDDGADGTAAEQEGDARRVGRVGGAIRGMVKSSTTRGVGEWDAQEPLGAAEKYASGGGDTQGNDEASYSTGDSAAQPSAEQSYQLLRQRRREASLNGNASVGVRNVEQSCAAAAVAAAAEVTKDAGRGLDRRHPSQAPTPGASESHRDILRRVTVLAERGRPHAALAALQAVDGRKRGTRVSVPYRVYALLFRALANGYSAQGCEELGLAAAPAEALQWLLRGMARQGYSAKTTTLNFGLEAFAVAAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNIIVKVMCRLQMFDQAFEALEVMQSGGFEPDRFTFSTLIHGLAKAGDNNGAWEVXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGEAISFAQHAYNQYGCAPTAGKYCRVVHAAAALNDGQHEARRAIVVAEQMWEGEWRGEGKTSHPVLGHANLRRLLEERGAFDQVNRL 2741
[Close]
BLAST of mRNA_Ecto-sp9_F_contig123.1823.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVF8_ECTSI)

HSP 1 Score: 1417 bits (3667), Expect = 0.000e+0
Identity = 780/867 (89.97%), Postives = 788/867 (90.89%), Query Frame = 1 
Query:  313 MVAAGAQPSIEAVEALADHFSEAKDARSIKAVLSLLKGSKPGLTAVDPIGIMFSRLVRAHCRRQDVTSALAEVAEMEATGREVDVEVYSDLLHGCAIARPPLLVEVEAVWAHIQERGLTTRGGVQQDIFVDLMTTHANSAGYAPFGYNQQDQQQ---------------------------------------------APLEKVDEAWDGMLEALNEAASASTDPDRTVDEGGLVTPESWMARASSLALCVRDSGLISDAAMSRSMEAFRSYRRYGGSFASREDIFGLAEVVRGLARCGRQSEVEAIFSDLRQDAEKAERNASAVAASTTKTAVDKAKTRSAATRAARVFDELLRALGASGRGLDSGGRPYGLSLLQVVEDVATQAHACGDRSQGDVDSRLTATLQAVLTTSRFLDREDAASINKAIRTALDSAATAIASEVDERHSVEHLQDGGEPELRREWAGPNLAALSLLALLHVSQNRWEGIPAAIDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGFGHPRDNNDDGDDGTAAEQEGDARRVVGVGEAIRGMVESSTTRGVDEWDAQEPLAASEKLANGGGGTQGNDEGSNSAGGTAAQPSAEQSYQLLRQRLREASLNGNASAGVRNVEQSCAAAVAAAAAELTKEAGRGLDRRHPSQAPTPGASESHRDILRRVTVLAERGRPHAALAALQAVDGRKRGTRVAVPYRVYALLFRALANGYSAQGWEELGLAAAPAEALQWLLRGMARQGYSAKTTALNFGLEAFAVAAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNIIVKVMCRLQMFDQAFEALEVMQRGGFE 2778
            MVAAGAQPSIEA+EALADHFSEAKDARSIKAVLSLLKGSKPGLTAVDPIGIMFSRLVRAHCRRQDVTSALAEVAEMEATGREVDVEVYSDLLHGCAIARPPLLVE+EAVWAHIQERGLTTRGGVQQDIFV LMTTHANSAGYAPFG NQQDQQQ                                             APLEKVDEAWDGMLEALNEAASASTDPDRT DEGGLVTPESWMARASSLALCVRDSGLISD AMSRSMEAFRSYRRYGGSFASREDIFGLAEVVRGLARCGRQSEVEAIFSDLRQDAEKAERNASAVAASTTKTAVDKAKTRSAATRAARVFDELLRALGA GRGLDSGGRPYGLSLL+VVEDVA QAHACGDRSQGDVDSRLTATLQAVLTTSRFLDREDAASINKAIRTALDSAATAIAS       VE LQ   EPELRREWAGPNLAALSLLALLHVSQNRWEGIPAAIDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGFG PRDNNDDGDDGTAAEQEGDARRVVGVGEAIRGMVESSTTRGVDEWDAQEPLAA+E+ ANG GGTQ N+EG       A +PSAEQSYQLLRQRLREASLNGNASAGVRNVEQSCAAAVAAAA ELTKEAGRG DRRHPSQAPT GASESHRDIL+RVTVLAERGRPHAALAALQAVDGRKRGTRVAVPYRVYALLFRALANGYSAQGWEELGLAAAPAEALQWLLRGMARQGY AKTT LNFGLEAFAVAAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNIIVKVMCRLQMFDQAFEALEVMQRGGFE
Sbjct:    1 MVAAGAQPSIEAIEALADHFSEAKDARSIKAVLSLLKGSKPGLTAVDPIGIMFSRLVRAHCRRQDVTSALAEVAEMEATGREVDVEVYSDLLHGCAIARPPLLVEMEAVWAHIQERGLTTRGGVQQDIFVGLMTTHANSAGYAPFGDNQQDQQQRTVLGACGVPHPLKGHGPPLSVPSAADKSNKFQHCSYSPRNSRTQAPLEKVDEAWDGMLEALNEAASASTDPDRTADEGGLVTPESWMARASSLALCVRDSGLISDDAMSRSMEAFRSYRRYGGSFASREDIFGLAEVVRGLARCGRQSEVEAIFSDLRQDAEKAERNASAVAASTTKTAVDKAKTRSAATRAARVFDELLRALGARGRGLDSGGRPYGLSLLEVVEDVAGQAHACGDRSQGDVDSRLTATLQAVLTTSRFLDREDAASINKAIRTALDSAATAIAS-------VEDLQGRSEPELRREWAGPNLAALSLLALLHVSQNRWEGIPAAIDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGFGPPRDNNDDGDDGTAAEQEGDARRVVGVGEAIRGMVESSTTRGVDEWDAQEPLAAAEESANGDGGTQVNEEGXXXXXXXAVRPSAEQSYQLLRQRLREASLNGNASAGVRNVEQSCAAAVAAAA-ELTKEAGRGPDRRHPSQAPTQGASESHRDILKRVTVLAERGRPHAALAALQAVDGRKRGTRVAVPYRVYALLFRALANGYSAQGWEELGLAAAPAEALQWLLRGMARQGYPAKTTTLNFGLEAFAVAAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNIIVKVMCRLQMFDQAFEALEVMQRGGFE 859
[Close]
BLAST of mRNA_Ecto-sp9_F_contig123.1823.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVF9_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 9.050e-47
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 1 
Query: 2935 DVGEAISFAQHAYNQYGCAPTARKFCRVVHAAAALDDGQHEARRAIVVAEQMWEGDWRGEGKTSHPVLGHANLRRLLKERGAFD 3186
            DVGEAISFAQHAYNQYGCAPTA KFCRVVHAAAALDDGQHEARRAIVVAEQMWEGDWRGEGKTSHPVLGHANLRRLL+ERGAFD
Sbjct:   37 DVGEAISFAQHAYNQYGCAPTAGKFCRVVHAAAALDDGQHEARRAIVVAEQMWEGDWRGEGKTSHPVLGHANLRRLLEERGAFD 120
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig123.1823.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Integrase0.000e+089.61catalytic domain-containing protein n=1 Tax=Ectoca... [more]
Uncharacterized0.000e+089.97protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized9.050e-4797.62protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig123contigEcto-sp9_F_contig123:41566..53385 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionPentatricopeptide repeat
Ec32 orthologEc-14_000950.1
Exons13
Model size4047
Cds size3204
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig123.1823.1prot_Ecto-sp9_F_contig123.1823.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig123 41566..52542 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928498.4413354-CDS-Ecto-sp9_F_contig123:41565..419671622928498.4413354-CDS-Ecto-sp9_F_contig123:41565..41967Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 41566..41967 +
1692277892.512515-CDS-Ecto-sp9_F_contig123:41565..419671692277892.512515-CDS-Ecto-sp9_F_contig123:41565..41967Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 41566..41967 +
1622928498.456579-CDS-Ecto-sp9_F_contig123:42646..428981622928498.456579-CDS-Ecto-sp9_F_contig123:42646..42898Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 42647..42898 +
1692277892.5205069-CDS-Ecto-sp9_F_contig123:42646..428981692277892.5205069-CDS-Ecto-sp9_F_contig123:42646..42898Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 42647..42898 +
1622928498.4718075-CDS-Ecto-sp9_F_contig123:43335..434551622928498.4718075-CDS-Ecto-sp9_F_contig123:43335..43455Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 43336..43455 +
1692277892.5284128-CDS-Ecto-sp9_F_contig123:43335..434551692277892.5284128-CDS-Ecto-sp9_F_contig123:43335..43455Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 43336..43455 +
1622928498.4837003-CDS-Ecto-sp9_F_contig123:44081..442781622928498.4837003-CDS-Ecto-sp9_F_contig123:44081..44278Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 44082..44278 +
1692277892.5359735-CDS-Ecto-sp9_F_contig123:44081..442781692277892.5359735-CDS-Ecto-sp9_F_contig123:44081..44278Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 44082..44278 +
1622928498.4960418-CDS-Ecto-sp9_F_contig123:44843..449611622928498.4960418-CDS-Ecto-sp9_F_contig123:44843..44961Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 44844..44961 +
1692277892.5437057-CDS-Ecto-sp9_F_contig123:44843..449611692277892.5437057-CDS-Ecto-sp9_F_contig123:44843..44961Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 44844..44961 +
1622928498.5102053-CDS-Ecto-sp9_F_contig123:45230..455041622928498.5102053-CDS-Ecto-sp9_F_contig123:45230..45504Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 45231..45504 +
1692277892.5516174-CDS-Ecto-sp9_F_contig123:45230..455041692277892.5516174-CDS-Ecto-sp9_F_contig123:45230..45504Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 45231..45504 +
1622928498.5235689-CDS-Ecto-sp9_F_contig123:45841..461491622928498.5235689-CDS-Ecto-sp9_F_contig123:45841..46149Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 45842..46149 +
1692277892.5614383-CDS-Ecto-sp9_F_contig123:45841..461491692277892.5614383-CDS-Ecto-sp9_F_contig123:45841..46149Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 45842..46149 +
1622928498.536737-CDS-Ecto-sp9_F_contig123:46566..474631622928498.536737-CDS-Ecto-sp9_F_contig123:46566..47463Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 46567..47463 +
1692277892.5720575-CDS-Ecto-sp9_F_contig123:46566..474631692277892.5720575-CDS-Ecto-sp9_F_contig123:46566..47463Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 46567..47463 +
1622928498.5546846-CDS-Ecto-sp9_F_contig123:47824..479621622928498.5546846-CDS-Ecto-sp9_F_contig123:47824..47962Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 47825..47962 +
1692277892.580777-CDS-Ecto-sp9_F_contig123:47824..479621692277892.580777-CDS-Ecto-sp9_F_contig123:47824..47962Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 47825..47962 +
1622928498.570567-CDS-Ecto-sp9_F_contig123:48500..485711622928498.570567-CDS-Ecto-sp9_F_contig123:48500..48571Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 48501..48571 +
1692277892.591882-CDS-Ecto-sp9_F_contig123:48500..485711692277892.591882-CDS-Ecto-sp9_F_contig123:48500..48571Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 48501..48571 +
1622928498.5836399-CDS-Ecto-sp9_F_contig123:49205..492781622928498.5836399-CDS-Ecto-sp9_F_contig123:49205..49278Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 49206..49278 +
1692277892.6026216-CDS-Ecto-sp9_F_contig123:49205..492781692277892.6026216-CDS-Ecto-sp9_F_contig123:49205..49278Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 49206..49278 +
1622928498.5942795-CDS-Ecto-sp9_F_contig123:49576..497051622928498.5942795-CDS-Ecto-sp9_F_contig123:49576..49705Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 49577..49705 +
1692277892.6106555-CDS-Ecto-sp9_F_contig123:49576..497051692277892.6106555-CDS-Ecto-sp9_F_contig123:49576..49705Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 49577..49705 +
1622928498.604793-CDS-Ecto-sp9_F_contig123:52317..525421622928498.604793-CDS-Ecto-sp9_F_contig123:52317..52542Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 52318..52542 +
1692277892.6188269-CDS-Ecto-sp9_F_contig123:52317..525421692277892.6188269-CDS-Ecto-sp9_F_contig123:52317..52542Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig123 52318..52542 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928498.6171174-UTR-Ecto-sp9_F_contig123:52542..533851622928498.6171174-UTR-Ecto-sp9_F_contig123:52542..53385Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig123 52543..53385 +
1692277892.6276114-UTR-Ecto-sp9_F_contig123:52542..533851692277892.6276114-UTR-Ecto-sp9_F_contig123:52542..53385Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig123 52543..53385 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig123.1823.1

>prot_Ecto-sp9_F_contig123.1823.1 ID=prot_Ecto-sp9_F_contig123.1823.1|Name=mRNA_Ecto-sp9_F_contig123.1823.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=1068bp
MAVFLRRSLVRSKRELALAVCSRSQRGQAPLARLLAGASPRLVHSALPAR
TSDPADGGASGTAAGAARPEDSVRVAVSQLQEEMFRVLCEPRPSSPSLVA
LVRGMVAAGAQPSIEAVEALADHFSEAKDARSIKAVLSLLKGSKPGLTAV
DPIGIMFSRLVRAHCRRQDVTSALAEVAEMEATGREVDVEVYSDLLHGCA
IARPPLLVEVEAVWAHIQERGLTTRGGVQQDIFVDLMTTHANSAGYAPFG
YNQQDQQQAPLEKVDEAWDGMLEALNEAASASTDPDRTVDEGGLVTPESW
MARASSLALCVRDSGLISDAAMSRSMEAFRSYRRYGGSFASREDIFGLAE
VVRGLARCGRQSEVEAIFSDLRQDAEKAERNASAVAASTTKTAVDKAKTR
SAATRAARVFDELLRALGASGRGLDSGGRPYGLSLLQVVEDVATQAHACG
DRSQGDVDSRLTATLQAVLTTSRFLDREDAASINKAIRTALDSAATAIAS
EVDERHSVEHLQDGGEPELRREWAGPNLAALSLLALLHVSQNRWEGIPAA
IDVLQEMHDRGLTPPATLAAQLETVFKRHGTVRQKRRSSFLLARALDGFG
HPRDNNDDGDDGTAAEQEGDARRVVGVGEAIRGMVESSTTRGVDEWDAQE
PLAASEKLANGGGGTQGNDEGSNSAGGTAAQPSAEQSYQLLRQRLREASL
NGNASAGVRNVEQSCAAAVAAAAAELTKEAGRGLDRRHPSQAPTPGASES
HRDILRRVTVLAERGRPHAALAALQAVDGRKRGTRVAVPYRVYALLFRAL
ANGYSAQGWEELGLAAAPAEALQWLLRGMARQGYSAKTTALNFGLEAFAV
AAKTKQVREGEEEVRARVCTEAMDFMEGMRDGWNGLLPPVAPNVVSFNII
VKVMCRLQMFDQAFEALEVMQRGGFEPDRFTFATLIHGLARAGDNDGAWE
VMVEMTNRGIAPDSIVIDGVVGGFVQTGDVGEAISFAQHAYNQYGCAPTA
RKFCRVVHAAAALDDGQHEARRAIVVAEQMWEGDWRGEGKTSHPVLGHAN
LRRLLKERGAFDQVNRL*
back to top

mRNA from alignment at Ecto-sp9_F_contig123:41566..53385+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig123.1823.1 ID=mRNA_Ecto-sp9_F_contig123.1823.1|Name=mRNA_Ecto-sp9_F_contig123.1823.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=11820bp|location=Sequence derived from alignment at Ecto-sp9_F_contig123:41566..53385+ (Ectocarpus species9 EcSCA_722f female)
ATGGCAGTATTCCTACGGAGGAGCTTGGTCAGGTCGAAAAGGGAGCTTGC
GCTTGCCGTTTGTTCCCGCAGCCAGCGTGGGCAAGCTCCTCTGGCAAGGT
TGCTAGCCGGAGCTTCGCCCCGCCTGGTGCACTCAGCGCTCCCAGCAAGA
ACATCTGATCCTGCGGATGGCGGTGCTTCCGGTACTGCTGCCGGCGCTGC
TAGGCCTGAAGACTCCGTTAGAGTAGCAGTGAGTCAGTTGCAGGAGGAGA
TGTTCAGAGTACTGTGTGAGCCGCGACCGAGCAGTCCATCACTGGTGGCG
TTGGTGCGGGGCATGGTCGCTGCCGGAGCTCAGCCCTCGATTGAGGCTGT
TGAAGCCTTGGCCGACCACTTCTCAGAAGCCAAGGACGCCAGGAGTATCA
AGGTAGGCAGTGGCAACTTGGCAGTGGGGTGTGGGGGGATGCACACGTTG
ACTGAACAGACAATTGGGGCAAACTTGATGTTTCGAAATGGTTTCAAGTT
ATGAATACTGCGGTACAATCGTACATAGCGGAACCTCTACTGTAGTCTTG
CCTCTGTGTAGGTGCTACACGGAGAATCTTGCTGTAGACTACAGCAGTAC
CAGCATCATGTACCGCAGGAACCAGCACGACGTCACAACAGTTGAAGCCA
ATGCAGGTCATCGCACACCCCCTGGACAAACCTTGAAAACTCGATAGCTA
TGCCAACCGTCTACCGTTCTTGGTAGTAGTAGTGTAGTCCATCTCGATGA
GATCTTTCCGAAATCCGAATCCACCGATCAATGCGGCAGTTGTATCCCCT
TTCTTGCGGAGCAATGGAGCTATGAACCTCGTTGCAGGGTGTGCACAATG
AACGACGTACTTGCGGCACTGCGGCTGAGAATGCGCCGAAAAGTAAAATG
ATCACACTCAATCGCGAGTCGCTATTTTGCTATTATTGTTTGTCTTCTAG
TTTCATGGGCACCACTGCTCGTATCGCTCTCTCTCACACGCACACTCTCT
CTGTTCTCTTGTCGCTGGCAAACACAGCACCCTTGCAAGGCACACCCACT
TCACCTTCCCCCTCCGTTACTTTCCCTCCAGGCCGTACTATCCTTGCTGA
AAGGCTCGAAGCCTGGCCTGACCGCAGTGGATCCGATCGGCATCATGTTT
TCCCGGTTGGTTCGAGCGCACTGCCGGCGTCAAGACGTGACCAGCGCACT
AGCGGAGGTGGCGGAGATGGAGGCAACGGGCCGAGAGGTTGACGTTGAGG
TTTACTCGGATTTGCTGCACGGGTGTGCGATCGCGAGACCACCTCTCCTG
GTGGAAGTGGAGGCTGTGTGGGCGCACATTCAGGTGAGAGCCGTACCTGT
ACACGCGCGAGTCTCGCAGGGTGCTCTGGTGAGGATTGCCACGTCGCGTG
CAGACCACACACGAAGCCGCTACATAGTGCTCGCTTGGTCCGGTTTGCAT
GTGCCGCAAAGGATGAGGATAGCGAGACAAGCTCAGCGTATGTAGGTGAC
TGGCCCCACTACTAAGGGTGAGGGTTCAGACACAATGCAAGATTGGACAG
CGGTGTAGGTGTGCGTTTTTTTCTCCCAGAGTTTTATGCGCTGGGCGGAG
AGCCAGGATCCTCGATTGAAATAGCAATGTATGCGTTGAGCCCATGTCAG
CAGGGTGTTGTGGACAGCTGCTGCAACACACTGCATCCTCTTGTTAACTC
TTGTATCCTTGAGTCGGGTGACTGACGTACCCCTTGCTGCGGCTCTCCTT
TCCTCCTCCATTAACCCCAGGAGCGAGGGCTTACGACAAGGGGAGGCGTT
CAGCAGGATATTTTCGTTGACCTCATGACAACCCACGCCAACAGCGCGGG
ATACGCTCCATTCGGCTATAACCAACAAGACCAGCAGCAGGTGACAAATT
TTCAAAGCACAAGCGTTAACTCTGTAGTAGGTCGCAAGGCAGCCCCCCTG
TCCTGCGAGTGCTGCAGGAGAATCGCAACGGCAAACTAAGCTCTCACTGG
TTGGAGCATGCCACACGTTTGTGCGGGTACAAAGTGTTTTTGCCGCTGTC
GTGCGCATCTATCTTGTTCTGTTTGTCTGACGGTTTGTTTCTAGTTTCGG
GAAGCCACTATTCGCTGTCGTGCCTCTGTTTGTGTGATGTGGCGACGGTT
TTGAGTAGAAAGGCCTACACCTGCGACTCGCAGGTTCGCGTCTTGGCTGC
GATGCAATACCAAAACAACCGAACATTACCATTCACCACGTGTTTGTGAG
CGGACTGTGCTGGGAGCGTGCGGTGTCCCCCACCCCCTTAAGGGACACGG
CCCACCGCTCTCGGTGCCGAGTGCAGCTGGCAAGTCAAATAAGTTCCAGC
ACTGCTCCTACAGTCCACAGAATTCGCGTACCCAGGTAGTTATATATATG
AAAGGCGGTAGCGTTTAGGCAGCCTGCAAACAGAATAGCTCTTTATCCTC
TTGAAAAATCGCTGACAAACTGATACCCACCCGCAATGTACGTACGCCCG
TGTTGGATATGTGCAGGCCCCGCTCGAAAAGGTTGACGAAGCTTGGGACG
GCATGCTGGAGGCGCTTAATGAAGCAGCAAGCGCATCGACAGATCCAGAC
AGAACTGTCGATGAAGGGGGGCTCGTGACTCCCGAGTCGTGGATGGCGCG
AGCCTCCTCGTTGGCCCTGTGCGTGCGGGACTCGGGGTTAATCTCAGATG
CTGCCATGTCAAGGTGAGGTTTTCGGGTACGACACCCGTCCGCGGGGCGT
GGCGGCTGCAGCAAGCAAATGAGTTTCGCCGCACTTTCGGCGCTCCTCTC
ATAGTGTTGGCGCCTAGTCGATACATACCAGATTCCAAATTTGGTGGTGG
CCCTCAAGTCGAGTAACTAGCTCTTGCCGGTTGGCTGTGACATGCACGCT
TTCGGCGTGTCTCTTCCCGGCTCTCGACTGCAATGCGAACGAGAGAGAGA
GGGCTCGGCCGGGCAATGGATTGAGCAGCACACCCGTGTACTGTCGAGCG
TGTAACCCGTTGTTACTCGTTGGGCTGCCGCGTGTTTCACGCACGCGCCT
GCTTCTCGTTAAGCGGGAAGGCTTCAGAAATGTCCTGTTTCTGACATAGA
GAGATGCATGTTTGTCACAGATGCAAGCTGACACATCTTTGGGTCCTCTT
GCGGCTCTTCCGGTGTGTCTACTTTCCCCCCCCCACCGCGCGTGTCGTGC
CTCGACTTGTGTTCGAGCTTGATCTTTACCTGCCGTGGTTGCTTACCCCC
CTCTACCGCCTTCCCGCTGTTGGTGCAGGTCTATGGAGGCTTTTCGATCT
TACCGGAGATACGGCGGCAGTTTCGCCAGCAGGGAAGACATCTTCGGCCT
CGCTGAGGTTGTGCGTGGCCTGGCCCGGTGCGGGCGACAATCCGAGGTAC
GCCTCGCCGCTCCTCCCCGTGATTACATGGAGGCAGTGATATGGGACTTT
GTTTTGTTTTATTTCATGCCTCACGTTGTTGCGCCGGGCCGTTTGGCCCG
TGGTGGCAGCACGTCTTCGAATGTTGAAGAGGGTTCATGCAGAAAATGCT
CTCACGGTTTTTCCCCTTGTTGCCTGCCCTACAGCTCTATTCTGTCAAAC
TAGAAGGAGGTACGAAATGTCCATTTTTTTTAGTTTGCGTTCCCGTTTCA
CCCATTTGGAATCAGGTGGAAGCCATCTTCTCGGATCTACGGCAGGATGC
CGAAAAAGCCGAGCGAAATGCCTCCGCCGTGGCTGCAAGCACCACCAAGA
CAGCCGTCGACAAGGCAAAGACGAGGAGCGCCGCTACCCGAGCCGCACGC
GTCTTCGACGAGCTGCTCCGGGCGCTCGGCGCTAGTGGGCGCGGCCTCGA
CTCGGGTGGCCGGCCGTACGGGCTGTCGCTGCTGCAGGTCGTTGAAGACG
TTGCGACGCAGGCCCACGCTTGCGGAGATCGAAGCCAAGGTGTGCTATGC
ATATATGTAGCGTTGGAGATACTCTTGGTGGATAGCGGGGCTCATGACAT
GCACTGGTGCGGTGAGGAGGTGGGTTGTGACTGTGCGACGTTTCAGCCTT
CACGCTTCTTAACTTTCTCGGGTCTCCCCAATTCTCTGTTCGTGTTCGTG
CGTGCATTGCTTGTGAGGCTGATTGGGATTGGTTTGATGCATGCATACGT
TTTGTCCATTTTGTCACCGCCGTGTGATTTTTCACCAATAGTCCCTCCGT
TCTGCCATGCTCCCGCTCGCCGCGACGAATGTTTAATGGGCTCTGCCGCA
CCTTCGCATGCCTCTGTTGGATCCAGGGGACGTTGACTCGCGACTGACGG
CAACGCTACAGGCCGTCCTGACAACGTCACGCTTCCTCGACCGCGAGGAT
GCAGCCTCTATCAACAAGGCCATCCGCACCGCCTTGGATTCCGCGGCAAC
AGCTATTGCTTCGGAGGTGGACGAAAGACACTCCGTCGAACATTTGCAAG
ACGGGGGTGAGCCCGAGCTGCGGCGGGAGTGGGCGGGTCCAAATTTGGCG
GCGCTGTCTCTGTTGGCCCTGTTGCACGTGTCCCAGAACCGGTGGGAAGG
AATCCCTGCTGCCATTGATGTCCTGCAAGAGATGGTGAGTGCCTTGAGAG
AACGAGCGCCTCCCTGTCTTACGCCGGGCGATGCCGCGCTGCTGTACAGA
GAACCTACATGAACACTACGCGTAGGTCGGATCACTCTGTTGCTCTGATC
TTGTGTAGCCATGAAAAAGCTTGGGCTTGCTCCCCGATGGAACGTCACGA
AACGTGAAAGAATAGGCGTTTGGTTGTTGGAAATAGGGTCGTCGGGGAAG
CGCCTCGGTGACCAACCCCGTCCACCGGGACCACGGGCACACTGGGCATT
TGTTTGATATTTCAGGCCGACTAACGTCGAAGCGTTGTAACGAACGCGAC
AAAAAAAAAATCACCCCGCTCATGAAGTGACCTTCCTCCTCCCCCATTCC
CTGCGCTTGCCCATGCCTATGCTGCTTCCCGCCGTCCCCCGCTTCTTGAA
GCACGACCGCGGGCTCACCCCGCCGGCCACGTTGGCTGCCCAGCTGGAGA
CCGTCTTCAAGCGCCATGGCACCGTCCGACAGAAGCGGCGGTCTTCGTTC
CTCCTCGCAAGAGCGCTGGACGGGTTCGGCCATCCTCGGGACAACAACGA
CGATGGCGACGATGGGACTGCCGCTGAGCAAGAAGGTGACGCCCGTCGCG
TCGTTGGGGTTGGAGAGGCGATTCGCGGCATGGTGGAGAGCTCGACCACC
AGAGGGGTGGACGAGTGGGACGCCCAAGAACCTCTCGCTGCTTCCGAGAA
ACTTGCGAACGGTGGTGGCGGTACGCAGGGCAACGACGAAGGCAGTAATA
GCGCGGGAGGCACCGCTGCCCAACCTTCTGCCGAGCAAAGCTACCAGCTC
CTCCGGCAGAGGCTGCGAGAGGCGTCCCTCAACGGAAACGCTTCGGCGGG
TGTTCGCAACGTGGAGCAGTCGTGCGCCGCCGCCGTTGCCGCCGCCGCCG
CGGAATTGACGAAGGAGGCGGGACGAGGACTAGACCGACGGCATCCCTCA
CAGGCACCGACGCCGGGAGCATCAGAGTCCCACCGAGATATCTTGCGGCG
CGTGACCGTTCTGGCGGAGAGAGGCCGCCCTCACGCCGCTCTCGCGGCTC
TGCAAGCCGTGGACGGCCGGAAGCGGGGTACGAGAGTGGCCGTGCCATAC
AGGGTGTACGCCCTGCTCTTTCGGGCGCTGGCGAACGGGTACTCGGCGCA
GGGCTGGGAGGAGCTCGGGCTAGCGGCAGCGCCGGCGGAAGCGCTGCAGT
GGCTGCTGAGGGGCATGGCGCGGCAGGGCTACTCGGCCAAGACTACCGCC
CTCAACTTCGGGCTCGAGGCCTTTGCCGTCGCTGCCAAAACTAAACAGGT
GACGGCGATTGCCTTGGGTGGTGTGTTGTTTGTGACAAAACGGAATAGCA
GTAACCTGTTGTATATACATTGTATAGCGCGCGTACCTTTTTCGGCGGCT
TGTTATATTTGGCGCTTTCAAGTTTATCCTTAAAAGCTGAGGGTCTACCG
GTGGTTCCGGGAGAGGAAAACTCGCAATATATATACGGGCGTCTCGCTGT
TGCCCGTATGTGTTGAAGAGGTTTGGGTCTCTCGCACACGCGTCTGGTGC
TTCTTTTCTACTAGACGGAAAACCTCAGTGGACCGAATGAATGCAAGACA
AGCAAACAACTATAATTACGGGAGCTGGCTTTCTCATCATCCCCGTTTGG
TTTATGAAGGTACGGGAAGGCGAGGAGGAGGTGCGGGCGCGGGTTTGCAC
GGAGGCTATGGATTTCATGGAGGGGATGCGGGACGGCTGGAACGGCTTGC
TTCCTCCAGTCGCACCGAACGTTGTGTCGTTCAACATTATTGTCAAGGTT
AGCATCGGAGTGTTAGGTGGAAAGTCGGGAATTATTTCACCACTGTTGTT
TTTGAAAGATGTCCAAGTTTCCTCAGTCCAGCAACTCGAACGATGGGATT
TCTTCACGTATGGTTCTGGCCTTTTGCTGTTTTCGGTATGGTTTATCTGT
TTTTGTCGCGACCCATCGTCGTACCGTGTACGTTTCCCTCCGGTGTTGGA
CTACAGAAAACTTCGTGTTAGATCCGCTTGAACACCACCCCGTTGAGGTT
GTGATGCCAGATGTATTTATAAATAGTAGGTTTAGACAACCATGCGATTT
TTTTCCGTGAGGCTTTGGTTCAAGTTTGATGTTTTTGCTCATCTCGACAA
TCTTGTCTGTTTCGAAAAGCCGTACCCTCCTCATTAATCTGCATCCCCTC
TCGTGTCTGGTGGTGATAACTGTTGCTTGTAGAAAACCATCGTTTTAGTT
CAAGCGTGTTAATTTGTCCGTGCCATGCCGTGTGTGTTTGGTGTCCGCTG
GCTGTGCTGCGCCTGCGGGATATCTTTGGCAACAGGTGATGTGTCGGCTT
CAGATGTTCGACCAAGCGTTCGAGGCTCTGGAAGTCATGCAAAGGGGGGG
CTTCGAGTGAGTGCATGCGTGTCTTGTCTTGTCTTGTCTTCCGTTTTTTC
AGCTCTTGTCTGGCGTCATATCGACTTGGTTTCGTCTGCATGCCCAACGG
CTATCGGTTCGTATGTTGAAACGCTTATTTTAGCTTGCTGTCGTAATTTA
CGAGCGAAATTTGTGCACGAGGGCTCTCCGCTATGTAAAAACCGTGATAG
TGTTCCGAAATTGGATTCTAAATTGCACGCAGGTTTGTCCGCAATCACCC
TTTTTCTTCATTCTCGAGATGACTTTATTTGCCTTTACCCACGTGCAATA
TCTCCTTCAATCATTGTGCTTTTCTATATCGCGGCTACGTGACTTTGACC
GCGCGCCTTGATTGATTGATAATGTACACCGCTATTGAGCGCACGAGCAA
CTACGCCCACAGCACGCAGCGTGCTATAATATTTCAATGGAAGTTGTGTC
CGGTTTTGAAGAGCCGCTCAGGAAGGCGCTCAGCGACGGCTGGCGTGGTA
TCCTACGAGCTAGGTCGCAAAAAGGAACGGGCGGAATATTGCCCCCGCCT
TCCAACGTGCGCATCTTGGCACTTCCTCTTAGCTTTTCCTGGTCCGCTCA
TCTGCCTCTTGGCATTAACCCCTGTCTCTCTACTGCCCAGGCCTGACCGA
TTCACGTTTGCTACCCTCATACACGGACTGGCGAGGGCCGGGGACAACGA
TGGGGCTTGGGAGGTACGAAAAGGCAATCTTCCACTCGTTGTCCGACAAA
TATTCTTGAAGTTTAATGTTTGTCCTTTCGTGAATCTCAAGTCCTGTGTG
GAAGAGTGAAATCTATGAGAAGAGAGCGCCCATCATGCTCTGGTTGTGTA
AGGTCACTTGGTCAAACGTTTCTGTTCGCCGCGCCGTTCCAATCCGGCAC
CGAACCGTCATATCTGTTTTGTTATCCAACGCTTCTGTTCGCTGCTGCCG
CTTCTACTAAAGCTGTGTGTGCTTTTGCCGCTGCAATGAATACTGCTGCG
GCTGTTACAAGGTCATGGTGGAGATGACCAACAGGGGCATCGCGCCGGAC
TCGATAGTGATCGACGGGGTAGTAGGCGGCTTCGTGCAGACGGGCGACGT
CGGGGAAGCCATCTCCTTCGCCCAACACGCTTACAACCAGGTGAACCACG
CAGCACAAGGTTGTGCTTTTTTTGTTTCTCTTGTTGGTTTATCCCTCTCC
TGGTACTAGTACGCCGGGAAATCGTGGGTTGCATGCATCCAATGGATCGA
GGCAACAAGAACCCAGCGTCCCACCGCGCCTCTTATTCCTCACAACCGTT
CCGCACGCGGTCGGGTGAACACGGCTTGGCGAGCCGTGAGACTTACGGGC
ATTCTACAGTCATGTTACTCCTCACGTTTGTCAAGTCCACCTACAAATCA
CCAACAAACCCGCCCAAAAACGGTGACTTCCGCACCTCCCGAATCCCCCC
TCCTTTCATGGGGCTGGGTGATACCTTCGGCTAGACACGCTCCATATAGC
TGCTCCCTGAGAACGACATCGCCTCCATGTTGTCGTTCCGATCTCCACTG
TTGCATCCGTCGGCAATGGAACGCGCGCGGCAAAGACCGCGCAACGACTT
CTAACTCCCCGTCGCGACATCCTAGGGATACCTGCGGTTGTACATTCACC
GCAAGACTCTGTAAATGACACGTGATTGAAATGCTGCCGCTTCCACATCT
GAGTCTTCGAATTATCTGGAGTTCATCGCCGCCAGCGCCGCAATCTCGAC
CGACGAAACGGACGTGGTGCTTTCGCGTCCTTTACCACCACCACATCCGT
CGAAGATCTCGGTACTTGCAGTGCAGTCGCTACCGTAGCGTCCTCTTCGC
TCGGCATCGCCAGCAGGTTACCAATGTCATGTCCCTCGGCTCCAGCGGCT
TCACCATCATTGCTACCGTAGGATGCATAATATGTCACACCCCCTGGACC
GATTTCCAAAAGCTCGATAACTCCACAGCAGAACAAGTGGTGGTGCCGGA
AACGGCAGTATTGGAACTGTCTCGTCGTGGTCTTTCCGAAAATGCATGGA
TTTGATTTCGGCATCGTCTTCGTTGTGAACCAAATACTGTAGAGGTTTGA
AATTCGGCCCAGGGGGTGTGGTATCTTATGCAACCGACGGTATGTTTCTT
GCTGCTGTCCCCACCAGACGGGTTTCCGCCGCATCCCCGACCGCCCTTGC
CGCGTCCATGGCCACAGCGTCGGTCGCCCCCGCGTTCGCATACGAGTGCA
TTCGTAACCGATATTTCCGTTCGGCTTGTGGAGCGTCTTGTATCGGCCGT
AGCTTGGCTTGAAACCGATGTCCCGAATCTCCCATGCGTACTCGGTTTGA
GGAAGGGAAAAACGTGTGTAGATAGTGTTAGCACCGGGAATCTCGCCTGC
GCTGATGTACTTCTCGTGTGCGTCCTCGATATCGTAAAAAATCTGGACTG
GGTTGGTATGCTTCCCGATTCTTAAGTTGGATTGCGCATCTGTTGCATGC
ACGCACGCTTCTGTTTTCGTCTGGGTATCACACCATTCTCGTTGCCCTAT
GCTACCACGGGTGATATCTGGCAAAATCGACGTTGATGGCTTGAGACAGG
AAGTCCACGCCACTGTTTTTGCCTCTCGTATTTCTTGGCCGACCCTCTGA
TTCACTCCATGCAGTTTCCCTCAATGCGGGCCGCTTGTGATTAACGGGGT
CGAATTTGTGGGGTTTTGTTTACACATGCATCTAGCTGCTTCGAAAACGA
ATCGAAATATCCTTCCTTTCTGGACGTCAGTCTCAGTCCCAGATATGGAC
GATCCAGACCGACATGTGTTTTGGAGGACTGCTCGCCATTGGGGCATAGC
CTGTGGCCGGGCCCTCTCCTACCAAGCTGATGTCAGTCGGCCTCAGCTTC
CGCGGGAACAAATTCGCTACCTTGGCTCTCACCTTCGTCAAATATCCCTC
CCCGCTGCGTCCACGGTGACTCCCTCACCTGACTCCCCCCGCGCCACGCT
GCTGGCTGGCATGAGCTGGGACATCATCCTATCCAACTCATCGTGAGGTT
GCTGCTGGTGCTCCTCCGTGTTTGCGTTTGCCAAAGCAATATATGCTGGC
AGCGCTTGCAGATTGAGACCCTGTGCTTCTACTCTCGTCGCACGTAGATC
ACCATTTTCGCCACCCATGTTGTCGCGGTTGACGTCAATACTCTGAACAA
GTGTTGTTGAAACCTCCCGCCGGTTAGCGCGGATACTCCATGGATGAATG
GTTGGATCGTGTATATCGGATGTCCACAGGGTGGAGACATACACACACGC
AGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGGGAGAGAGAGAG
AGTGATGTGGGAAGGCACCCGCACGCCCCCAAGAGTCCAAGAGGGTAGTC
ATTAAGATATACATAGCCAGCCGAGCCGACAGAGGCCATCAATGGTGCAG
AATCACGCCAACATCACGCAGCAACGCGTGTCGATTGTTTTGTGGCACCG
TCAATACCTTTTGGCAGTTGTCGGATTACATGTCGCATCGTAACAAGAGT
CCTCATGTACCGCTTTTACATACAATACACAGGCGGTAGCATTAAGAATG
CTCCCGCTGTGCCTCCCGGCGCTCACCCGATATTCCACCCGTTCACCGAG
TAGTCCGCGTGGGATACTATTTACGGTAAACCATGCCTTCTCACGGTCTC
CTCCCCACCCTCCCCCGTGCTGCCCGCATACTCTCCACGCTGCCGCAAAC
AGTACGGTTGTGCGCCGACAGCGAGGAAATTTTGTAGGGTGGTACACGCC
GCGGCGGCGCTGGACGATGGGCAGCACGAGGCTCGACGAGCAATCGTCGT
GGCCGAGCAGATGTGGGAGGGTGATTGGAGAGGGGAAGGGAAGACCAGTC
ACCCGGTTCTGGGACACGCCAACCTGAGAAGATTGCTGAAGGAACGAGGG
GCTTTCGATCAAGTCAATCGCCTTTGAAGATGTCGTTTACTCTCCGATGG
CTTTTGCTGCAGCTATCCTCGGGTGGTGCCACTTCCTCAGTGCGGTTACC
AGCAGGAGTATCTCGACTCAGCCAGAGGCGAATTGGTCTCAGACCGGCGG
GCTACAACATGATGGCATGGTAGTTGGGAGCGCGTAGGGAGGGCTATCGC
TCCAGCGCAACCGCTGTGTTATCTGGCCGAAACCTTCGCGTATGTGTGGA
GTACGCACCGATAACCATGCAGAGGGTCTGCTGGACTTCGACACTAGCGC
AAGCATGACTTCGTCATCTGTAAGAGATCTCATCCAGCAGCCGTTGAACA
TGGGTTATTATTATAGTGACATCGGCACGAAGAATCCGTGGTCGGAATTG
GCTTGAAAGGGGTCTCGACCTCGTTAACGTGTCCTTCGTGAGCATGAACA
GACAGCACCATGATTTTGCGTACGAACATGCGGCGTGGTTGCGTTTTCGA
AGGTGTTACTTGCTACCACTTTTCCCCACTGCTGTTAGGAGTGTACTTCC
GGTGGGTTGTGAAAGGGAAAATAAAGAGAACCCTACGAAATAGGTACGGG
GGCCCTAGCACGTTCGCAGGGTTTTCGCTTGAAGGTTGCCCTAGCTCAAG
TCGGTAGGTGACCCCCGTGTATCAAAGTTCTTTGGCACGGGGTACACGGA
CAACTTGCGCCATGCCCCGTTTTGTGGGCGAACGGAACAGTGTTGACTAA
AATTACAATCCGCGTTCCGTGGCAGAACGGAGAGAGAAATGAATGGTGAT
AGAACGTCGTACATTATGCAGCCATGCTCAACGCGCACCATTTGTTTGAT
CCATCTGTCCTTGAAGGTTC
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig123:41566..53385+

>mRNA_Ecto-sp9_F_contig123.1823.1 ID=mRNA_Ecto-sp9_F_contig123.1823.1|Name=mRNA_Ecto-sp9_F_contig123.1823.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=6408bp|location=Sequence derived from alignment at Ecto-sp9_F_contig123:41566..53385+ (Ectocarpus species9 EcSCA_722f female)
ATGGCAGTATTCCTACGGAGGAGCTTGGTCAGGTCGAAAAGGGAGCTTGC
GCTTGCCGTTTGTTCCCGCAGCCAGCGTGGGCAAGCTCCTCTGGCAAGGT
TGCTAGCCGGAGCTTCGCCCCGCCTGGTGCACTCAGCGCTCCCAGCAAGA
ACATCTGATCCTGCGGATGGCGGTGCTTCCGGTACTGCTGCCGGCGCTGC
TAGGCCTGAAGACTCCGTTAGAGTAGCAGTGAGTCAGTTGCAGGAGGAGA
TGTTCAGAGTACTGTGTGAGCCGCGACCGAGCAGTCCATCACTGGTGGCG
TTGGTGCGGGGCATGGTCGCTGCCGGAGCTCAGCCCTCGATTGAGGCTGT
TGAAGCCTTGGCCGACCACTTCTCAGAAGCCAAGGACGCCAGGAGTATCA
AGATGGCAGTATTCCTACGGAGGAGCTTGGTCAGGTCGAAAAGGGAGCTT
GCGCTTGCCGTTTGTTCCCGCAGCCAGCGTGGGCAAGCTCCTCTGGCAAG
GTTGCTAGCCGGAGCTTCGCCCCGCCTGGTGCACTCAGCGCTCCCAGCAA
GAACATCTGATCCTGCGGATGGCGGTGCTTCCGGTACTGCTGCCGGCGCT
GCTAGGCCTGAAGACTCCGTTAGAGTAGCAGTGAGTCAGTTGCAGGAGGA
GATGTTCAGAGTACTGTGTGAGCCGCGACCGAGCAGTCCATCACTGGTGG
CGTTGGTGCGGGGCATGGTCGCTGCCGGAGCTCAGCCCTCGATTGAGGCT
GTTGAAGCCTTGGCCGACCACTTCTCAGAAGCCAAGGACGCCAGGAGTAT
CAAGGCCGTACTATCCTTGCTGAAAGGCTCGAAGCCTGGCCTGACCGCAG
TGGATCCGATCGGCATCATGTTTTCCCGGTTGGTTCGAGCGCACTGCCGG
CGTCAAGACGTGACCAGCGCACTAGCGGAGGTGGCGGAGATGGAGGCAAC
GGGCCGAGAGGTTGACGTTGAGGTTTACTCGGATTTGCTGCACGGGTGTG
CGATCGCGAGACCACCTCTCCTGGTGGAAGTGGAGGCTGTGTGGGCGCAC
ATTCAGGCCGTACTATCCTTGCTGAAAGGCTCGAAGCCTGGCCTGACCGC
AGTGGATCCGATCGGCATCATGTTTTCCCGGTTGGTTCGAGCGCACTGCC
GGCGTCAAGACGTGACCAGCGCACTAGCGGAGGTGGCGGAGATGGAGGCA
ACGGGCCGAGAGGTTGACGTTGAGGTTTACTCGGATTTGCTGCACGGGTG
TGCGATCGCGAGACCACCTCTCCTGGTGGAAGTGGAGGCTGTGTGGGCGC
ACATTCAGGAGCGAGGGCTTACGACAAGGGGAGGCGTTCAGCAGGATATT
TTCGTTGACCTCATGACAACCCACGCCAACAGCGCGGGATACGCTCCATT
CGGCTATAACCAACAAGACCAGCAGCAGGAGCGAGGGCTTACGACAAGGG
GAGGCGTTCAGCAGGATATTTTCGTTGACCTCATGACAACCCACGCCAAC
AGCGCGGGATACGCTCCATTCGGCTATAACCAACAAGACCAGCAGCAGGC
CCCGCTCGAAAAGGTTGACGAAGCTTGGGACGGCATGCTGGAGGCGCTTA
ATGAAGCAGCAAGCGCATCGACAGATCCAGACAGAACTGTCGATGAAGGG
GGGCTCGTGACTCCCGAGTCGTGGATGGCGCGAGCCTCCTCGTTGGCCCT
GTGCGTGCGGGACTCGGGGTTAATCTCAGATGCTGCCATGTCAAGGCCCC
GCTCGAAAAGGTTGACGAAGCTTGGGACGGCATGCTGGAGGCGCTTAATG
AAGCAGCAAGCGCATCGACAGATCCAGACAGAACTGTCGATGAAGGGGGG
CTCGTGACTCCCGAGTCGTGGATGGCGCGAGCCTCCTCGTTGGCCCTGTG
CGTGCGGGACTCGGGGTTAATCTCAGATGCTGCCATGTCAAGGTCTATGG
AGGCTTTTCGATCTTACCGGAGATACGGCGGCAGTTTCGCCAGCAGGGAA
GACATCTTCGGCCTCGCTGAGGTTGTGCGTGGCCTGGCCCGGTGCGGGCG
ACAATCCGAGGTCTATGGAGGCTTTTCGATCTTACCGGAGATACGGCGGC
AGTTTCGCCAGCAGGGAAGACATCTTCGGCCTCGCTGAGGTTGTGCGTGG
CCTGGCCCGGTGCGGGCGACAATCCGAGGTGGAAGCCATCTTCTCGGATC
TACGGCAGGATGCCGAAAAAGCCGAGCGAAATGCCTCCGCCGTGGCTGCA
AGCACCACCAAGACAGCCGTCGACAAGGCAAAGACGAGGAGCGCCGCTAC
CCGAGCCGCACGCGTCTTCGACGAGCTGCTCCGGGCGCTCGGCGCTAGTG
GGCGCGGCCTCGACTCGGGTGGCCGGCCGTACGGGCTGTCGCTGCTGCAG
GTCGTTGAAGACGTTGCGACGCAGGCCCACGCTTGCGGAGATCGAAGCCA
AGGTGGAAGCCATCTTCTCGGATCTACGGCAGGATGCCGAAAAAGCCGAG
CGAAATGCCTCCGCCGTGGCTGCAAGCACCACCAAGACAGCCGTCGACAA
GGCAAAGACGAGGAGCGCCGCTACCCGAGCCGCACGCGTCTTCGACGAGC
TGCTCCGGGCGCTCGGCGCTAGTGGGCGCGGCCTCGACTCGGGTGGCCGG
CCGTACGGGCTGTCGCTGCTGCAGGTCGTTGAAGACGTTGCGACGCAGGC
CCACGCTTGCGGAGATCGAAGCCAAGGGGACGTTGACTCGCGACTGACGG
CAACGCTACAGGCCGTCCTGACAACGTCACGCTTCCTCGACCGCGAGGAT
GCAGCCTCTATCAACAAGGCCATCCGCACCGCCTTGGATTCCGCGGCAAC
AGCTATTGCTTCGGAGGTGGACGAAAGACACTCCGTCGAACATTTGCAAG
ACGGGGGTGAGCCCGAGCTGCGGCGGGAGTGGGCGGGTCCAAATTTGGCG
GCGCTGTCTCTGTTGGCCCTGTTGCACGTGTCCCAGAACCGGTGGGAAGG
AATCCCTGCTGCCATTGATGTCCTGCAAGAGATGGGGACGTTGACTCGCG
ACTGACGGCAACGCTACAGGCCGTCCTGACAACGTCACGCTTCCTCGACC
GCGAGGATGCAGCCTCTATCAACAAGGCCATCCGCACCGCCTTGGATTCC
GCGGCAACAGCTATTGCTTCGGAGGTGGACGAAAGACACTCCGTCGAACA
TTTGCAAGACGGGGGTGAGCCCGAGCTGCGGCGGGAGTGGGCGGGTCCAA
ATTTGGCGGCGCTGTCTCTGTTGGCCCTGTTGCACGTGTCCCAGAACCGG
TGGGAAGGAATCCCTGCTGCCATTGATGTCCTGCAAGAGATGCACGACCG
CGGGCTCACCCCGCCGGCCACGTTGGCTGCCCAGCTGGAGACCGTCTTCA
AGCGCCATGGCACCGTCCGACAGAAGCGGCGGTCTTCGTTCCTCCTCGCA
AGAGCGCTGGACGGGTTCGGCCATCCTCGGGACAACAACGACGATGGCGA
CGATGGGACTGCCGCTGAGCAAGAAGGTGACGCCCGTCGCGTCGTTGGGG
TTGGAGAGGCGATTCGCGGCATGGTGGAGAGCTCGACCACCAGAGGGGTG
GACGAGTGGGACGCCCAAGAACCTCTCGCTGCTTCCGAGAAACTTGCGAA
CGGTGGTGGCGGTACGCAGGGCAACGACGAAGGCAGTAATAGCGCGGGAG
GCACCGCTGCCCAACCTTCTGCCGAGCAAAGCTACCAGCTCCTCCGGCAG
AGGCTGCGAGAGGCGTCCCTCAACGGAAACGCTTCGGCGGGTGTTCGCAA
CGTGGAGCAGTCGTGCGCCGCCGCCGTTGCCGCCGCCGCCGCGGAATTGA
CGAAGGAGGCGGGACGAGGACTAGACCGACGGCATCCCTCACAGGCACCG
ACGCCGGGAGCATCAGAGTCCCACCGAGATATCTTGCGGCGCGTGACCGT
TCTGGCGGAGAGAGGCCGCCCTCACGCCGCTCTCGCGGCTCTGCAAGCCG
TGGACGGCCGGAAGCGGGGTACGAGAGTGGCCGTGCCATACAGGGTGTAC
GCCCTGCTCTTTCGGGCGCTGGCGAACGGGTACTCGGCGCAGGGCTGGGA
GGAGCTCGGGCTAGCGGCAGCGCCGGCGGAAGCGCTGCAGTGGCTGCTGA
GGGGCATGGCGCGGCAGGGCTACTCGGCCAAGACTACCGCCCTCAACTTC
GGGCTCGAGGCCTTTGCCGTCGCTGCCAAAACTAAACAGCACGACCGCGG
GCTCACCCCGCCGGCCACGTTGGCTGCCCAGCTGGAGACCGTCTTCAAGC
GCCATGGCACCGTCCGACAGAAGCGGCGGTCTTCGTTCCTCCTCGCAAGA
GCGCTGGACGGGTTCGGCCATCCTCGGGACAACAACGACGATGGCGACGA
TGGGACTGCCGCTGAGCAAGAAGGTGACGCCCGTCGCGTCGTTGGGGTTG
GAGAGGCGATTCGCGGCATGGTGGAGAGCTCGACCACCAGAGGGGTGGAC
GAGTGGGACGCCCAAGAACCTCTCGCTGCTTCCGAGAAACTTGCGAACGG
TGGTGGCGGTACGCAGGGCAACGACGAAGGCAGTAATAGCGCGGGAGGCA
CCGCTGCCCAACCTTCTGCCGAGCAAAGCTACCAGCTCCTCCGGCAGAGG
CTGCGAGAGGCGTCCCTCAACGGAAACGCTTCGGCGGGTGTTCGCAACGT
GGAGCAGTCGTGCGCCGCCGCCGTTGCCGCCGCCGCCGCGGAATTGACGA
AGGAGGCGGGACGAGGACTAGACCGACGGCATCCCTCACAGGCACCGACG
CCGGGAGCATCAGAGTCCCACCGAGATATCTTGCGGCGCGTGACCGTTCT
GGCGGAGAGAGGCCGCCCTCACGCCGCTCTCGCGGCTCTGCAAGCCGTGG
ACGGCCGGAAGCGGGGTACGAGAGTGGCCGTGCCATACAGGGTGTACGCC
CTGCTCTTTCGGGCGCTGGCGAACGGGTACTCGGCGCAGGGCTGGGAGGA
GCTCGGGCTAGCGGCAGCGCCGGCGGAAGCGCTGCAGTGGCTGCTGAGGG
GCATGGCGCGGCAGGGCTACTCGGCCAAGACTACCGCCCTCAACTTCGGG
CTCGAGGCCTTTGCCGTCGCTGCCAAAACTAAACAGGTACGGGAAGGCGA
GGAGGAGGTGCGGGCGCGGGTTTGCACGGAGGCTATGGATTTCATGGAGG
GGATGCGGGACGGCTGGAACGGCTTGCTTCCTCCAGTCGCACCGAACGTT
GTGTCGTTCAACATTATTGTCAAGGTACGGGAAGGCGAGGAGGAGGTGCG
GGCGCGGGTTTGCACGGAGGCTATGGATTTCATGGAGGGGATGCGGGACG
GCTGGAACGGCTTGCTTCCTCCAGTCGCACCGAACGTTGTGTCGTTCAAC
ATTATTGTCAAGGTGATGTGTCGGCTTCAGATGTTCGACCAAGCGTTCGA
GGCTCTGGAAGTCATGCAAAGGGGGGGCTTCGAGTGATGTGTCGGCTTCA
GATGTTCGACCAAGCGTTCGAGGCTCTGGAAGTCATGCAAAGGGGGGGCT
TCGAGCCTGACCGATTCACGTTTGCTACCCTCATACACGGACTGGCGAGG
GCCGGGGACAACGATGGGGCTTGGGAGGCCTGACCGATTCACGTTTGCTA
CCCTCATACACGGACTGGCGAGGGCCGGGGACAACGATGGGGCTTGGGAG
GTCATGGTGGAGATGACCAACAGGGGCATCGCGCCGGACTCGATAGTGAT
CGACGGGGTAGTAGGCGGCTTCGTGCAGACGGGCGACGTCGGGGAAGCCA
TCTCCTTCGCCCAACACGCTTACAACCAGGTCATGGTGGAGATGACCAAC
AGGGGCATCGCGCCGGACTCGATAGTGATCGACGGGGTAGTAGGCGGCTT
CGTGCAGACGGGCGACGTCGGGGAAGCCATCTCCTTCGCCCAACACGCTT
ACAACCAGTACGGTTGTGCGCCGACAGCGAGGAAATTTTGTAGGGTGGTA
CACGCCGCGGCGGCGCTGGACGATGGGCAGCACGAGGCTCGACGAGCAAT
CGTCGTGGCCGAGCAGATGTGGGAGGGTGATTGGAGAGGGGAAGGGAAGA
CCAGTCACCCGGTTCTGGGACACGCCAACCTGAGAAGATTGCTGAAGGAA
CGAGGGGCTTTCGATCAAGTCAATCGCCTTTGATACGGTTGTGCGCCGAC
AGCGAGGAAATTTTGTAGGGTGGTACACGCCGCGGCGGCGCTGGACGATG
GGCAGCACGAGGCTCGACGAGCAATCGTCGTGGCCGAGCAGATGTGGGAG
GGTGATTGGAGAGGGGAAGGGAAGACCAGTCACCCGGTTCTGGGACACGC
CAACCTGAGAAGATTGCTGAAGGAACGAGGGGCTTTCGATCAAGTCAATC
GCCTTTGA
back to top