mRNA_Ecto-sp9_F_contig11938.1565.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig11938.1565.1 vs.
Match: Methyltransf_11 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E6_9PHAE) HSP 1 Score: 259 bits (663), Expect = 4.440e-84 Identity = 125/130 (96.15%), Postives = 128/130 (98.46%), Query Frame = 1
Query: 1 LRQVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKPEKASSDDDATDAISATAEGWYNSDNAFNFYFKVRG 390
L+ VYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKPEKASSDD+ATDAISATA+GWYNSDNAFNFYFKV G
Sbjct: 17 LKDVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKPEKASSDDNATDAISATAKGWYNSDNAFNFYFKVWG 146
BLAST of mRNA_Ecto-sp9_F_contig11938.1565.1 vs.
Match: Putative (sarcosine-dimethylglycine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Z7_ECTSI) HSP 1 Score: 256 bits (653), Expect = 5.640e-80 Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 1
Query: 1 LRQVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKPEKASSDDDATDAISATAEGWYNSDNAFNFYFKVRG 390
L++VYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKP+ SSDD+ATDAISATAEGWYNSDNAFNFYFKV G
Sbjct: 220 LQEVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKPDDDSSDDNATDAISATAEGWYNSDNAFNFYFKVWG 349
BLAST of mRNA_Ecto-sp9_F_contig11938.1565.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A2_9PHAE) HSP 1 Score: 244 bits (623), Expect = 3.380e-76 Identity = 122/147 (82.99%), Postives = 126/147 (85.71%), Query Frame = 1
Query: 1 LRQVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESV-------------------KEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKPEKASSDDDATDAISATAEGWYNSDNAFNFYFKV 384
L+ VYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESV KEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKP++ASSDD+ATDAISATAEGWYNSDNAFNFYFK
Sbjct: 385 LKDVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVGLRRFQFKADGQNIAALAVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKPDEASSDDNATDAISATAEGWYNSDNAFNFYFKA 531
BLAST of mRNA_Ecto-sp9_F_contig11938.1565.1 vs.
Match: Putative (sarcosine-dimethylglycine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W9_ECTSI) HSP 1 Score: 188 bits (477), Expect = 1.270e-55 Identity = 85/130 (65.38%), Postives = 105/130 (80.77%), Query Frame = 1
Query: 1 LRQVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKPEKASSDDDATDAISATAEGWYNSDNAFNFYFKVRG 390
L+ VY R L+D+ TP+ Y KW + +GL FVEF D ++ THY SV++VL+S RG +G+EDEFIDNM RG++AW+SAA+R LICWGY+TF KP+ SSDD+ATDAISATAEGWYNSDNAFNFYFKV G
Sbjct: 187 LQDVYNRCHLEDMSTPEEYIKWGKVHGLEFVEFVDMAENLATHYGSVRDVLVSRRGNLEGVEDEFIDNMVRGIEAWISAAQRNLICWGYMTFTKPDDDSSDDNATDAISATAEGWYNSDNAFNFYFKVWG 316
BLAST of mRNA_Ecto-sp9_F_contig11938.1565.1 vs.
Match: Methyltransf_11 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC33_9PHAE) HSP 1 Score: 171 bits (433), Expect = 7.190e-48 Identity = 81/130 (62.31%), Postives = 104/130 (80.00%), Query Frame = 1
Query: 1 LRQVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKPEKASSDDDATDAISATAEGWYNSDNAFNFYFKVRG 390
L++VY+R+ L D+ TP+SYAKW +++GL FVEF D T ++ HY +V+EVLMS RG DG+EDEFIDNMARGLDAW SAA R LI WG + F KPEKAS+ +A +AI+ATA+G+Y+SDNAFNFY +V G
Sbjct: 214 LQEVYQRIHLDDMATPESYAKWGKAHGLEFVEFVDMTDNLALHYGAVREVLMSRRGNLDGVEDEFIDNMARGLDAWTSAAGRDLIRWGCLVFTKPEKASNTQNAANAIAATAKGYYDSDNAFNFYRQVWG 343
BLAST of mRNA_Ecto-sp9_F_contig11938.1565.1 vs.
Match: Putative (sarcosine-dimethylglycine methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA4_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 2.210e-22 Identity = 44/91 (48.35%), Postives = 58/91 (63.74%), Query Frame = 1
Query: 10 VYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAK 282
VY R+ L+D+G+P SY WAE GL V F DRT ++ HY +VK VL + R + ++DNM RGLDAWV+AA + +CWGY F K
Sbjct: 201 VYRRIHLEDMGSPASYQAWAERCGLKLVGFEDRTSNLAAHYGAVKGVLEAKRAELTNISPAYVDNMIRGLDAWVNAAGKSNLCWGYFLFRK 291
BLAST of mRNA_Ecto-sp9_F_contig11938.1565.1 vs.
Match: Methyltransf_11 (domain-containing protein n=1 Tax=Mameliella alba TaxID=561184 RepID=A0A6F8QDH6_9RHOB) HSP 1 Score: 77.4 bits (189), Expect = 1.220e-14 Identity = 38/97 (39.18%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 1 LRQVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSH--RGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKP 285
L+ VY+R++L DLG+P+ Y + AE+ G V+ + D++THY V+E L+++ + G E++D MA GL+ WV AA+ G + WG F KP
Sbjct: 154 LQPVYDRLQLNDLGSPRFYREAAEALGFETVDQEEAVSDLRTHYFRVREELLANYEKLREAGASAEYLDKMAVGLENWVKAADEGHLAWGVQHFRKP 250
BLAST of mRNA_Ecto-sp9_F_contig11938.1565.1 vs.
Match: Glycine (N-methyltransferase n=12 Tax=Rhodobacterales TaxID=204455 RepID=A0A0B3RPI1_9RHOB) HSP 1 Score: 77.8 bits (190), Expect = 3.800e-14 Identity = 39/97 (40.21%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 1 LRQVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSH--RGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKP 285
L+ VY+R++L DLG+P+ Y + AE+ G VE + D++THY V+E L+++ + G E++D MA GL+ WV AA+ G + WG F KP
Sbjct: 464 LQPVYDRLQLNDLGSPRFYREAAEALGFETVEQEEAVSDLRTHYFRVREELLANYEKLREAGASAEYLDKMAVGLENWVKAADDGHLAWGIQHFRKP 560
BLAST of mRNA_Ecto-sp9_F_contig11938.1565.1 vs.
Match: Methyltransferase (domain-containing protein n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A7Z8LBJ4_9RHOB) HSP 1 Score: 75.9 bits (185), Expect = 1.800e-13 Identity = 38/99 (38.38%), Postives = 59/99 (59.60%), Query Frame = 1
Query: 1 LRQVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSH--RGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKPEK 291
L+ VY+R++L LG+P Y A + G VE + T D++THY+ V+E L+S+ + G E++D M GL+ WV AA+ G + WG F KP++
Sbjct: 464 LKPVYDRLQLNSLGSPGFYRDAATAAGFEVVEQEEATTDLRTHYDRVREELLSNYDKLRDAGCTAEYLDKMMLGLENWVKAADAGQLRWGIQLFRKPQR 562
BLAST of mRNA_Ecto-sp9_F_contig11938.1565.1 vs.
Match: Glycine/sarcosine (N-methyltransferase n=1 Tax=Rubrimonas cliftonensis TaxID=89524 RepID=A0A1H4DV52_9RHOB) HSP 1 Score: 72.4 bits (176), Expect = 2.930e-12 Identity = 35/96 (36.46%), Postives = 54/96 (56.25%), Query Frame = 1
Query: 1 LRQVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSHRGTS-DGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAKP 285
L+QVY+R+ L L +P+ YA+ A + G V F + T +++THY V E + + R + ++D M GL AWV AA+ G + WG + KP
Sbjct: 464 LKQVYDRLGLNSLASPRFYAEAARAAGFEVVGFDEMTGNLRTHYARVAEEMQARRAALLENASPAYLDGMQAGLAAWVRAADEGALVWGVMRLRKP 559 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11938.1565.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig11938.1565.1 >prot_Ecto-sp9_F_contig11938.1565.1 ID=prot_Ecto-sp9_F_contig11938.1565.1|Name=mRNA_Ecto-sp9_F_contig11938.1565.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=130bp LRQVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVback to top mRNA from alignment at Ecto-sp9_F_contig11938:362..3007+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig11938.1565.1 ID=mRNA_Ecto-sp9_F_contig11938.1565.1|Name=mRNA_Ecto-sp9_F_contig11938.1565.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2646bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11938:362..3007+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11938:362..3007+ >mRNA_Ecto-sp9_F_contig11938.1565.1 ID=mRNA_Ecto-sp9_F_contig11938.1565.1|Name=mRNA_Ecto-sp9_F_contig11938.1565.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=780bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11938:362..3007+ (Ectocarpus species9 EcSCA_722f female)back to top |