mRNA_Ecto-sp9_F_contig1183.1511.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1183.1511.1 vs.
Match: Uracil-DNA (glycosylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFW4_ECTSI) HSP 1 Score: 513 bits (1321), Expect = 4.460e-183 Identity = 270/280 (96.43%), Postives = 274/280 (97.86%), Query Frame = 1
Query: 1 MPGTNSRTGANNGSSXXXXXXXXXXXXXXXXXXGGGLGSGEQAVSKRPKISCSEGSPIKEEGWATALSGETSKPYFGRLQAFLDKQYASKVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEQFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNVL 840
MPGTNS TGANN XXXXXXXXXXXXXXXXXX GGLGSGE+AVSKRPKIS SEGSPIKE+GWATALSGET+KPYFGRLQAFLDKQYASKVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWE+FTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNVL
Sbjct: 1 MPGTNSSTGANNXXXXXXXXXXXXXXXXXXXXXXGGLGSGERAVSKRPKISSSEGSPIKEDGWATALSGETTKPYFGRLQAFLDKQYASKVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEKFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNVL 280
BLAST of mRNA_Ecto-sp9_F_contig1183.1511.1 vs.
Match: Uracil-DNA (glycosylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBN7_9STRA) HSP 1 Score: 298 bits (762), Expect = 7.980e-99 Identity = 140/224 (62.50%), Postives = 173/224 (77.23%), Query Frame = 1
Query: 169 PIKEEGWATALSGETSKPYFGRLQAFLDKQYAS-KVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEQFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 837
P+ + W+ ALS E KPYF +L AFL KQ A+ K IYPP+DK+F+A ++CPL V+VVILGQDPYH PGQAHGL+FSV +GV QPPSLRN+VKEA +CCG PTK+G L W QGVLLLNTVL+VE+ SH +GWEQFTD VVR LN+ +R +VFLLWGKPSQ+KGA I+ ++HRVITC+HPSPL AT+ +PF GS CF +AND L + G +DWN+
Sbjct: 2 PLTDPVWSQALSPEFGKPYFVKLLAFLAKQAAAGKAIYPPKDKVFHALNTCPLDRVRVVILGQDPYHGPGQAHGLSFSVAQGVAQPPSLRNIVKEATACCGTKPTKNGCLTPWAVQGVLLLNTVLTVEKGAPLSHHKKGWEQFTDEVVRLLNRQERTIVFLLWGKPSQQKGAHINRARHRVITCSHPSPLGATKTKEPFTGSRCFARANDMLVKSGQEPIDWNL 225
BLAST of mRNA_Ecto-sp9_F_contig1183.1511.1 vs.
Match: Uracil-DNA (glycosylase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYA9_9STRA) HSP 1 Score: 275 bits (704), Expect = 1.500e-88 Identity = 128/225 (56.89%), Postives = 161/225 (71.56%), Query Frame = 1
Query: 169 PIKEEGWATALSGETSKPYFGRLQAFLDKQYAS-KVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEQFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNVL 840
P WA + E S+PYF L FL + + K ++PPR ++F+AF C NV+VVI+GQDPYH PGQAHGL+FSV GV PPSLRNM+KEA SC GI GNL W QGVL+LN VL+VE KANSH+ +GWEQFTDAV+R +NK + +VFLLWGKP+Q+KG I+ SKH VITC+HPSPL+A + +PF+GS CF +AN+AL E+G VDW +L
Sbjct: 105 PELPPSWAAVVDKEFSRPYFVNLVKFLKSEASKGKRVFPPRPEIFSAFSHCDFDNVRVVIIGQDPYHGPGQAHGLSFSVKHGVAVPPSLRNMIKEAQSCEGIAKPNHGNLTHWAKQGVLMLNAVLTVEAHKANSHQKKGWEQFTDAVIRAVNKREAGVVFLLWGKPAQEKGRSINRSKHTVITCSHPSPLAAMKTSEPFLGSRCFSRANEALVEMGQSKVDWRIL 329
BLAST of mRNA_Ecto-sp9_F_contig1183.1511.1 vs.
Match: Uracil-DNA (glycosylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWG6_9STRA) HSP 1 Score: 260 bits (665), Expect = 2.260e-83 Identity = 125/223 (56.05%), Postives = 158/223 (70.85%), Query Frame = 1
Query: 172 IKEEGWATALSGETSKPYFGRLQAFLDKQYASKV-IYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEQFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 837
+ E W L+ E K YF +L+AFL ++ K IYPP+ +F A + CP +KVVI+GQDPYH PGQAHGL FSV +GV PPSL+N+ KEA S GI G+L SWC+QGVLLLNTVL+V S+ANSHK QGWE FTDAV+R +N+ +VFLLWGKP+Q KGALI +KH +IT +HPSPL AT+ +PFIGS+CF +AN+ L + G +DW V
Sbjct: 55 LTEPKWKDLLAPEFKKSYFKQLEAFLVREQKKKATIYPPKADIFAALNLCPFDGIKVVIIGQDPYHGPGQAHGLCFSVQRGVPPPPSLKNIYKEACSDVGIPKPSHGSLLSWCNQGVLLLNTVLTVRASEANSHKKQGWETFTDAVIRLVNEHATGVVFLLWGKPAQDKGALISRAKHCIITSSHPSPLGATKTNEPFIGSKCFSRANEYLTKSGKTPIDWTV 277
BLAST of mRNA_Ecto-sp9_F_contig1183.1511.1 vs.
Match: Uracil-DNA (glycosylase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T8C9_9STRA) HSP 1 Score: 258 bits (659), Expect = 2.010e-82 Identity = 122/223 (54.71%), Postives = 158/223 (70.85%), Query Frame = 1
Query: 172 IKEEGWATALSGETSKPYFGRLQAFLDKQYASKV-IYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEQFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 837
+ E W L+ E YF RL+ FL ++ K I+PPR+++F A + CP +KVVI+GQDPYH PGQAHGL FSV +GV PPSL+N+ KEA S GI K G+L SWC+QGVL+LN VL+V ++ANSHK QGWE FTDAV+R +N + +VFLLWGKP+Q+KGALI +KH V+T +HPSPL AT+ +PFIGS+CF KAN L + G +DW +
Sbjct: 58 LTEPKWTALLAPEFKMAYFRRLETFLAQEQKKKAAIFPPREEIFAALNLCPFDKIKVVIIGQDPYHGPGQAHGLCFSVARGVPPPPSLKNIYKEANSDIGIPIPKHGSLLSWCNQGVLMLNAVLTVRATEANSHKKQGWETFTDAVIRLINDQSQNVVFLLWGKPAQEKGALISRTKHCVLTSSHPSPLGATKTTEPFIGSKCFSKANAYLVQHGKDEIDWTL 280
BLAST of mRNA_Ecto-sp9_F_contig1183.1511.1 vs.
Match: Uracil-DNA (glycosylase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJU8_9STRA) HSP 1 Score: 258 bits (659), Expect = 3.050e-82 Identity = 122/221 (55.20%), Postives = 158/221 (71.49%), Query Frame = 1
Query: 178 EEGWATALSGETSKPYFGRLQAFLDKQY-ASKVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEQFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 837
E GW L E KPY+ L AFL ++ A K I+PP+ +F+A + CP VKVVILGQDPYH PGQAHGLAFSV +G+ PPSLRNM KEA++ I+ +G+L W QGVLLLNTVL+V + +ANSHK++GWE+FTDA++R LNK LVF+LWGK +QK A +D SKH VIT +HPSPL A++ +PFIGS+CF +AN LE+ G ++W +
Sbjct: 73 EPGWQAQLGAEARKPYWRSLDAFLRQEAKAGKQIFPPKSMVFSALELCPFDKVKVVILGQDPYHGPGQAHGLAFSVQEGIAIPPSLRNMYKEAMTDVKISKPTTGSLVPWAKQGVLLLNTVLTVRKGEANSHKDRGWEKFTDAIIRSLNKNKNGLVFMLWGKHAQKVAAPVDRSKHLVITSSHPSPLGASKTKEPFIGSKCFSRANAYLEKKGKEPINWKI 293
BLAST of mRNA_Ecto-sp9_F_contig1183.1511.1 vs.
Match: Uracil-DNA (glycosylase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2UDE2_HETAK) HSP 1 Score: 256 bits (653), Expect = 8.910e-81 Identity = 124/220 (56.36%), Postives = 157/220 (71.36%), Query Frame = 1
Query: 187 WATALSGETSKPYFGRLQAFLD-KQYASKVIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKS--GNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEQFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 837
W LS E SKPYF L F+ ++ + K+IYPP++ +F+A + CPL ++KVVI+GQDPYH P QAHG++FSV+ GV PPSLRNM+KEAV I P G L +W QGVLLLN VL+VE++ ANSH+ +GWEQFTDAV+RE+++ VFLLWGKP+Q K ID KHRVI AHPSPLSAT+ PFIGS C+ +AN L ELG VDW++
Sbjct: 114 WHGVLSTEFSKPYFETLVGFIHGRRTSGKIIYPPQNMVFSALNECPLDSIKVVIIGQDPYHGPNQAHGMSFSVLPGVPHPPSLRNMIKEAVEDVSIQPPAKNYGYLINWSRQGVLLLNAVLTVEKASANSHQKKGWEQFTDAVIREVSRQSPGCVFLLWGKPAQAKARGIDRGKHRVIESAHPSPLSATKTNAPFIGSRCYSRANALLAELGREPVDWSI 333
BLAST of mRNA_Ecto-sp9_F_contig1183.1511.1 vs.
Match: Uracil-DNA (glycosylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AAY8_9STRA) HSP 1 Score: 253 bits (645), Expect = 2.110e-80 Identity = 120/223 (53.81%), Postives = 151/223 (67.71%), Query Frame = 1
Query: 172 IKEEGWATALSGETSKPYFGRLQAFLDKQYASKV-IYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEQFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 837
+ E W L+ E K YF L FL ++ K IYPP+D++F A + CP VKVVILGQDPYH PGQAHGL FSV K V PPSLRN+ KEA+S I G L SWC QGVL+LNTVL+V ++ NSHK QGWE FTD ++R++++ +VFLLWGKP+Q+K LID SKH++ T +HPSPL AT+ +PFIGS CF K N+ L + G +DW V
Sbjct: 50 LTEPKWREVLAQEFKKSYFKNLDTFLVQEQKKKAKIYPPKDEIFTALNLCPFDKVKVVILGQDPYHGPGQAHGLCFSVQKPVPPPPSLRNIYKEAMSDVKIPKPSHGCLLSWCHQGVLMLNTVLTVRAAEPNSHKKQGWENFTDVIIRKISQDSEGVVFLLWGKPAQEKIPLIDRSKHKIFTSSHPSPLGATKTAEPFIGSRCFSKTNEYLVQQGKEPIDWTV 272
BLAST of mRNA_Ecto-sp9_F_contig1183.1511.1 vs.
Match: Uracil-DNA (glycosylase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QHR0_SAPDV) HSP 1 Score: 253 bits (646), Expect = 2.330e-80 Identity = 121/226 (53.54%), Postives = 154/226 (68.14%), Query Frame = 1
Query: 163 GSPIKEEGWATALSGETSKPYFGRLQAFLDKQYASK-VIYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEQFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 837
G + E W L+ E K YF L AFL ++ K +I+PP+ ++F A + CP +KVVILGQDPYH PGQAHGL FSV K V PPSL+N+ KEA++ I G L SWC QGVLLLNTVL+V ++ANSHK QGWE FTD ++R+++K +VFLLWGKP+Q+K ALID SKH ++T +HPSPL AT+ +PFIGS CF K N L + G +DW V
Sbjct: 61 GDLLTEPTWREMLAPEFKKSYFKSLDAFLVREQQKKAMIFPPKSEIFTALNLCPFDKIKVVILGQDPYHGPGQAHGLCFSVQKPVPPPPSLKNIYKEAIADVNIPKPSHGCLLSWCDQGVLLLNTVLTVRATEANSHKKQGWETFTDVIMRKISKETSGVVFLLWGKPAQEKSALIDRSKHCILTSSHPSPLGATKTAEPFIGSRCFSKTNAYLVQQGKDPIDWTV 286
BLAST of mRNA_Ecto-sp9_F_contig1183.1511.1 vs.
Match: Uracil-DNA (glycosylase n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8I4_9STRA) HSP 1 Score: 251 bits (640), Expect = 1.320e-79 Identity = 120/223 (53.81%), Postives = 154/223 (69.06%), Query Frame = 1
Query: 172 IKEEGWATALSGETSKPYFGRLQAFLDKQYASKV-IYPPRDKLFNAFDSCPLSNVKVVILGQDPYHQPGQAHGLAFSVMKGVMQPPSLRNMVKEAVSCCGITPTKSGNLDSWCSQGVLLLNTVLSVERSKANSHKNQGWEQFTDAVVRELNKGDRRLVFLLWGKPSQKKGALIDSSKHRVITCAHPSPLSATRKPDPFIGSECFKKANDALEELGHGGVDWNV 837
+ E W L+ E K YF +L+AFLD++ K I+PPR ++F A + CP ++ VVI+GQDPYH PGQAHGL FSV +GV PPSL+N+ KEA GI G+L SWC QGVL+LN VL+V ++ANSHK QGWE FTDAV+R +N +VFLLWGKP+Q+KGALI +KH V+T +HPSPL AT+ +PFIGS+CF KAN L +DW +
Sbjct: 54 VTEPTWNDLLAPEFKKAYFKQLEAFLDREQKKKAAIFPPRHEIFAALNLCPFDSINVVIIGQDPYHGPGQAHGLCFSVARGVPPPPSLKNIYKEANKDVGIPVPTHGSLLSWCRQGVLMLNAVLTVRATEANSHKKQGWETFTDAVIRLVNDQADHVVFLLWGKPAQEKGALISRTKHCVLTSSHPSPLGATKTAEPFIGSKCFSKANAYLASHNKPEIDWTL 276 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1183.1511.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1183.1511.1 >prot_Ecto-sp9_F_contig1183.1511.1 ID=prot_Ecto-sp9_F_contig1183.1511.1|Name=mRNA_Ecto-sp9_F_contig1183.1511.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=281bp MPGTNSRTGANNGSSKRASPDSSSDAAAGTAASGGGLGSGEQAVSKRPKIback to top mRNA from alignment at Ecto-sp9_F_contig1183:21881..25701+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1183.1511.1 ID=mRNA_Ecto-sp9_F_contig1183.1511.1|Name=mRNA_Ecto-sp9_F_contig1183.1511.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3821bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1183:21881..25701+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1183:21881..25701+ >mRNA_Ecto-sp9_F_contig1183.1511.1 ID=mRNA_Ecto-sp9_F_contig1183.1511.1|Name=mRNA_Ecto-sp9_F_contig1183.1511.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1686bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1183:21881..25701+ (Ectocarpus species9 EcSCA_722f female)back to top |