mRNA_Ecto-sp9_F_contig1153.1306.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1153.1306.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF93_ECTSI) HSP 1 Score: 818 bits (2114), Expect = 1.710e-283 Identity = 459/472 (97.25%), Postives = 464/472 (98.31%), Query Frame = 1
Query: 1 MDDRKALIAAVGEAAAAAPAGEGEEGSATRYESLLVFVKRHSSRSDDLNLGEVFQTMSKKEHNRVWTRVLEAVAPIVEQGRFLSSQXXXXXXXXXXXXXXXXXTREAKREGTTPERPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXXAKKNNQASVSLAMEVLYAAATLAHEFLADKERVAPRALVETAVHLHDVVLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGAASYDATLQQQFVALTGLLEDAHPQVRAVAGK 1416
MDDRKALIAAVGEAAAAAPAGEGEEGSATRYESLLVFVKRHSSRSDDLNLGEVFQTMSKKEHN VWT+VLEAVAPIVEQGRFLSSQXXXXXXXXXXXXXXX TREAKREGTTPERPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXX NNQASVSLAMEVLYA+ATLAHEFLADKERVAPRALV+TAV+LHD+VLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRG EGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGAASYDATLQQQFVALT LLEDAHPQVRAVAGK
Sbjct: 1 MDDRKALIAAVGEAAAAAPAGEGEEGSATRYESLLVFVKRHSSRSDDLNLGEVFQTMSKKEHNWVWTQVLEAVAPIVEQGRFLSSQXXXXXXXXXXXXXXXNSTREAKREGTTPERPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXXXXXNNQASVSLAMEVLYASATLAHEFLADKERVAPRALVDTAVYLHDIVLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGTEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGAASYDATLQQQFVALTDLLEDAHPQVRAVAGK 472
BLAST of mRNA_Ecto-sp9_F_contig1153.1306.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG90_9PHAE) HSP 1 Score: 539 bits (1388), Expect = 6.120e-176 Identity = 278/308 (90.26%), Postives = 287/308 (93.18%), Query Frame = 1
Query: 493 SLAMEVLYAAATLAHEFLADKERVAPRALVETAVHLHDVVLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGAASYDATLQQQFVALTGLLEDAHPQVRAVAGK 1416
S ++VLYAAATLAHEFLADKERVAPRALV+TAV+LHD+VLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMH +KGALLLLDFEDESSDSLRALLLRTFMSPVYLK SEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNIL+VLEGLHSQKK KGVDADLLRLYGPVMWRSLRVANPSVRAQ + GAA+YDATLQQQFVALT LLEDAHPQVRAVAGK
Sbjct: 38 SRQVQVLYAAATLAHEFLADKERVAPRALVDTAVYLHDIVLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHAVKGALLLLDFEDESSDSLRALLLRTFMSPVYLKSSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILVVLEGLHSQKKAKGVDADLLRLYGPVMWRSLRVANPSVRAQGYLL---------SGVGAAAYDATLQQQFVALTDLLEDAHPQVRAVAGK 336
BLAST of mRNA_Ecto-sp9_F_contig1153.1306.1 vs.
Match: Condensin (II non structural maintenance of chromosomes subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM8_9STRA) HSP 1 Score: 321 bits (823), Expect = 3.380e-94 Identity = 192/452 (42.48%), Postives = 255/452 (56.42%), Query Frame = 1
Query: 100 LLVFVKRHSSRSDDLNLGEVFQTMSKKEHNRVWTRVLEAVAPIVEQGRFLSSQXXXXXXXXXXXXXXXXXTREAKREGTTPERPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXXAKKNNQASVSLAMEVLYAAATLAHEFLADKERVAPRALVETAVHLHDVVLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQ------------YLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGAASYDATLQ------------QQFVALTGLLED 1383
LL +KRH +RSD+ +L EV Q + +KEH R W L V PI E +L XX EGT E E A A GA D A VS+++E++ A TLA FLADK+R AP +L+ T LH ++L LQG +G AL+ IA+ CE WW +RPG EHLV L+P +L+R+L P A++ADV+R+ +GALLLLD+ED ++ RALLLR F++P +L+ G+R LAS FGLHP+ + IHAV+ AQ+P A++AVLAAYGEVYFR WRGA+G Y ++E C+Q LM VL+ H+Q++ KGVDA LLRLY P++WR+LRVANP VRAQA +L AFPLQDP AA+ +ATLQ +QF AL+ +++D
Sbjct: 34 LLALLKRHRARSDEYDLDEVIQALPRKEHERFWAAALALVTPITEGHLYLIDDEEDEXX--------------GSEEGTADE-----EDAPAA-------HGAVDK---------------------DAVVSISLELMDAITTLAGLFLADKKRAAPPSLLSTMAALHGILLYLQGAEGAALQTAIARACEAWWRAERPGGEHLVACLLPYLLLRALDPAARDADVRRLCDARGALLLLDWEDADAEGTRALLLRAFLAPAFLRGDAGRRFLASVFGLHPAFAARIHAVVSAQLPRARRAVLAAYGEVYFRAWRGADGXXXXXXXXXXXXXYAAEIEGACMQPLMXXXXXXXXXXXXXXARGVLDAFHAQRRQKGVDAALLRLYDPILWRALRVANPVVRAQAAALLARAFPLQDPDGPAAAAEATLQHXXXXXXXXXXXRQFDALSAIMQD 438
BLAST of mRNA_Ecto-sp9_F_contig1153.1306.1 vs.
Match: Condensin-2 (complex subunit g2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TM42_9STRA) HSP 1 Score: 313 bits (801), Expect = 1.900e-91 Identity = 177/443 (39.95%), Postives = 253/443 (57.11%), Query Frame = 1
Query: 97 SLLVFVKRHSSRSDDLNLGEVFQTMSKKEHNRVWTRVLEAVAPIVEQGRFLSSQXXXXXXXXXXXXXXXXXTREAKREGTTPERPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXXAKKNNQASVSLAMEVLYAA--ATLAHEFLADKERVAPRALVETAVHLHDVVLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGAASYDATLQQQFVALTGLLEDAHPQVR--AVAG 1413
+LL V R+++++DD L + QTM+ K+ +++W + + P +E +R+G G + + P+ G A + A V+ A L A+ + + + P L++ V LHDV+ L G+ GEAL+ I +VCE WW Q R GAE LV +P ++ RSL DA+EA VKR++ L+GALLLLD+E+E++ R LLL+ F+ P YLK ++G+RLL FGLHPSLV +IH +K+Q+P AKK ++ AYG+VYFR WR AEG YLE +E C+QDLMHA +H ++P ++ + ++L+ H+ K+++ VDA LLRLY P++WRSLRVA+P+VRAQA +LVDAFPLQDP G A LQ+Q L LL D P VR AVAG
Sbjct: 24 TLLNLVARNAAKNDDFALEDFLQTMTAKDQSKLWEEIASRLNPTIE-------------------LVAADGQEGEERDG----------DGGQEFVDTCPKVGKDQE------------EAWRAFRLLSAVVATAQATLQVCPPASASTSTSSSADSATPEGLLQVMVALHDVLFQLSGIDGEALQGAIVRVCEQWWKQGRGGAEFLVAQTVPYLVARSLEEDAREALVKRVYALRGALLLLDYEEEATGPFRELLLQCFLKPTYLKSADGRRLLTFLFGLHPSLVVDIHETVKSQLPYAKKKLVQAYGDVYFRAWRAAEGPYLEAIETGCVQDLMHAAVHCASPSLYATLRLLLQSFHANKRLREVDAMLLRLYDPILWRSLRVASPTVRAQATSLLVDAFPLQDPDMGTIEAAALLQRQLDVLQSLLLDPAPHVRVTAVAG 425
BLAST of mRNA_Ecto-sp9_F_contig1153.1306.1 vs.
Match: HEAT (repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GEA4_ACACA) HSP 1 Score: 283 bits (723), Expect = 5.780e-81 Identity = 177/444 (39.86%), Postives = 249/444 (56.08%), Query Frame = 1
Query: 94 ESLLVFVKRHSSRSDDLNLGEVFQTMSKKEHNRVWTRVLEAVAPIVEQGRFLSSQXXXXXXXXXXXXXXXXXTREAKREGTTPERPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXXAKKNNQ-ASVSLAMEVLYAAATLAHEFLADKERVAPRALVETAVHLHDVVLSLQGLQGEA----LRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGAASYDATLQQQFVALTGLLEDAHPQVRAVA 1410
E L+ VKRH +R D+ +L E+ +T +K + ++W+ + V+ IVE F + AKR P++ XXXXXXXXXXXX AKK ++ + A+E L A A LA F+A K+R+AP +L ++ LH ++L + ++G L IA++CE WW QDR E LV I +++++L AK A +KR++ + ALLLLDF+D+SS L+ LLLR F+ P++L+ ++GK+ L FGLHP + IH +K Q+P K++L AYGEVYF+ W+ A+G YL K+E CLQDL+ +H + + VL +H QKK KGVD LLRLY P++WRSL+VANP VR A +L DAFPLQDP + D LQ+QF LL D P VR VA
Sbjct: 19 EELVALVKRHRARGDNYDLKEIVETFPRKHYEQLWSALHVHVSAIVEGSTFTKPEANDEQQPQQAKKSNAKAKPAAKRGRGRPKKNDEEXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXKRAKKGSEDKTAETALEYLRAVALLASLFIASKDRIAPDSLFDSVALLHGILLDVLAIKGAGHALLLHNEIAQLCETWWKQDRTQKEALVPLTIFYLVLQTLEEGAKTATIKRLYDFRSALLLLDFQDDSSTQLKGLLLRCFIHPMFLRAADGKKFLVYLFGLHPPYIDAIHDTIKGQLPACPKSLLEAYGEVYFKAWKVAQGPYLLKLEYTCLQDLISCAVHVQNEAVVSGLRKVLRHIHEQKKQKGVDEMLLRLYEPIIWRSLKVANPMVRRNATVLLADAFPLQDPDSAQRETDELLQKQFNQFEALLTDDVPVVRCVA 457
BLAST of mRNA_Ecto-sp9_F_contig1153.1306.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CM40_9STRA) HSP 1 Score: 256 bits (654), Expect = 9.350e-77 Identity = 134/271 (49.45%), Postives = 175/271 (64.58%), Query Frame = 1
Query: 598 LHDVVLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGAASYDATLQQQFVALTGLLEDAHPQVRAVA 1410
+H+V+ L + A + I K CE WWTQ R G E LVV L+P +L+RSL A DVKR++ ++ A LLDFEDES DSL+ LLLR + P+Y+ ++G+R LA F LHP+ V ++H +K QMP ++ V AAYGEVYF+ WR +EG+ K+E C+QDLMH +HAS P M VL ++K+ +GVD L RLY P++WRSL ANP+VR A LVDAFPLQ+P A DA+LQ+QF AL LL D P VR VA
Sbjct: 3 MHNVLFYLMVREAAACQMSIMKACERWWTQARAGREGLVVQLLPTLLMRSLEEGAAPGDVKRVYAVRSAFELLDFEDESIDSLKELLLRCVIHPLYVSRADGRRFLAFLFSLHPTFVDDLHDTIKNQMPSTRR-VHAAYGEVYFKAWRNSEGELTLKIERGCVQDLMHRGVHASLPAMFAATRQVLAAFINEKRSRGVDEMLDRLYEPILWRSLAAANPTVRRNAATALVDAFPLQNPEAARPVVDASLQKQFDALGALLSDPVPNVRVVA 272
BLAST of mRNA_Ecto-sp9_F_contig1153.1306.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6U8W1_POCDA) HSP 1 Score: 242 bits (617), Expect = 3.850e-73 Identity = 127/262 (48.47%), Postives = 168/262 (64.12%), Query Frame = 1
Query: 634 GEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHAS---TPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGAASYDATLQQQFVALTGLLEDAHPQVRAVA 1410
E+L+ IA++CE+W+ + G E L+ P +++RSL +DVKR+ GL+ LLL+DF+D+SS+SL+ LL + + P YLK EG+R L+ FGL+P L E H +K Q+P VL+ YGEVYFR WR A G YL+ +E C+QDLM A +HA T M + VLE +H QKK +GVD LLRLY P++WR+ +VANP VRA A +L D FPLQ+P AG D LQ+QF L LL DAHP VRA A
Sbjct: 7 SESLQNDIAQLCELWFLNELEGKEELITQTFPYLIIRSLGRGLV-SDVKRVWGLRQCLLLMDFDDDSSESLKQLLHQCMIHPTYLKLEEGRRFLSYSFGLNPGLAKEFHKTIKNQIPYCTMNVLSLYGEVYFRAWRVASGAYLKVLEENCIQDLMFAAVHAQRTGTKSMASRLRKVLEYIHQQKKQRGVDEALLRLYQPIIWRAFKVANPMVRANAAALLTDIFPLQNPDAGNEEIDELLQKQFDILKDLLGDAHPTVRATA 267
BLAST of mRNA_Ecto-sp9_F_contig1153.1306.1 vs.
Match: condensin-2 (complex subunit G2-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F554239) HSP 1 Score: 256 bits (653), Expect = 1.260e-71 Identity = 157/443 (35.44%), Postives = 231/443 (52.14%), Query Frame = 1
Query: 94 ESLLVFVKRHSSRSDDLNLGEVFQTMSKKEHNRVWTRVLEAVAPIVEQGRFLSSQXXXXXXXXXXXXXXXXXTREAKREGTTPERPSTPESAGAQTMPRRPRRGAADSGGXXXXXXXXXXXXXXAKKNNQASVSLAMEVLYAAATLAHEFLADKERVAPRALVETAVHLHDVVLSL-QGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHAS---TPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGAASYDATLQQQFVALTGLLEDAHPQVRAVA 1410
++ L F+++H+S++D N+ E QT+ KK+H R+W+ + + ++ S + +++ EG + ++ +E + A + +K P A +ETA LH +++SL +G E+L+ IA++CE+W+ + G E L+ P +++RSL +DVKR+ GL+ LLL+DF+D+SS+SL+ LL + + P YLK EG+R L+ FGL+P L E H +K Q+P VL+ YGEVYFR WR A G YL+ +E C+QDLM A +HA T M + VLE +H QKK +GVD LLRLY P++WR+ +VANP VRA A +L D FPLQ+P AG D LQ+QF L LL DAHP VRA A
Sbjct: 18 QAFLRFIEQHNSKNDSFNIEEALQTLPKKDHERLWSGLRDMTRRLLLTNPVGSREND-----------------DSEEEGPS----------------------------------------------EWPALLSYLEGVTTVGLCALVVMPEKPTHVPSAFLETAAILHGLLMSLPEG--SESLQNDIAQLCELWFLNELEGKEELITQTFPYLIIRSLGRGLV-SDVKRVWGLRQCLLLMDFDDDSSESLKQLLHQCMIHPTYLKLEEGRRFLSYSFGLNPGLAKEFHKTIKNQIPYCTMNVLSLYGEVYFRAWRVASGAYLKVLEENCIQDLMFAAVHAQRTGTKSMASRLRKVLEYIHQQKKQRGVDEALLRLYQPIIWRAFKVANPMVRANAAALLTDIFPLQNPDAGNEEIDELLQKQFDILKDLLGDAHPTVRATA 394
BLAST of mRNA_Ecto-sp9_F_contig1153.1306.1 vs.
Match: Putative (condensin n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EH25_EMIHU) HSP 1 Score: 243 bits (621), Expect = 1.010e-70 Identity = 127/298 (42.62%), Postives = 178/298 (59.73%), Query Frame = 1
Query: 568 PRALVETAVHLHDVVLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQ-----------------YLEKVEMLCLQDLMHACIHASTPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGAASYDATLQQQFVALTGLLEDAHPQVRAVA 1410
P L A LHD++ L + L+ I ++CE WW +RPG + LV I +LV +L A ADVKR+ L+ AL +LD+ D S +L+ LLL + P+ L+C+EG++LL FGLHP ++E+H +KAQ+P +K++ YGE+YFR WR A G YLE++E CLQDLM +HA++ M + VL H+QK+ +GVD+ LLRLY P++WR+L+VANP VR A +L++AFPLQDP+ D LQ+QF AL LL+D VR VA
Sbjct: 100 PEKLQAVAEALHDIIFDLHDPRASTLQGAIVELCESWWLAERPGRDELVPQTISYLLVSALHEAATAADVKRLWALRSALGVLDYADPSVAALKRLLLHCMIKPLVLRCAEGRKLLVYLFGLHPPFIAELHRAIKAQIPVCRKSLRDLYGEIYFRAWRAASGASSXXXSGGARGGSSVCAYLERLEEGCLQDLMFHAVHAASANMATALRQVLAYTHAQKRQRGVDSMLLRLYEPILWRALKVANPHVRRNAATLLIEAFPLQDPTLPLTQLDEALQRQFDALAALLKDDSVPVRVVA 397
BLAST of mRNA_Ecto-sp9_F_contig1153.1306.1 vs.
Match: Uncharacterized (protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RMC3_TRIAD) HSP 1 Score: 252 bits (643), Expect = 3.160e-70 Identity = 129/291 (44.33%), Postives = 183/291 (62.89%), Query Frame = 1
Query: 550 DKERVAPRALVETAVHLHDVVLSLQGLQGEALRRVIAKVCEMWWTQDRPGAEHLVVHLIPVMLVRSLSPDAKEADVKRMHGLKGALLLLDFEDESSDSLRALLLRTFMSPVYLKCSEGKRLLASFFGLHPSLVSEIHAVMKAQMPGAKKAVLAAYGEVYFRVWRGAEGQYLEKVEMLCLQDLMHACIHA--STPKMHQNILIVLEGLHSQKKVKGVDADLLRLYGPVMWRSLRVANPSVRAQACQVLVDAFPLQDPSAGAASYDATLQQQFVALTGLLEDAHPQVRAVAGK 1416
DK+ + P +L E A LH +++SL L+ I+++CE+WW++D E L+ H++P +L+R L PDA D+KR+ ++ LLLLD++D S+DS + LLLR +M P++LK EG+R+L FGLH L+ +IHA +K +P + +++ YGEVYFR WR + G Y EK+E C+QDLMH IHA S P + + +L+ H +KK GVD LL LY P++WRSL+VAN VRA A +L AFPL DP D +Q+QF A LL+D P VR V K
Sbjct: 107 DKDGIEP-SLHEIASILHGILMSLPEA-AITLQDSISRICELWWSKDFSAKEELIPHMVPYLLMRCLQPDAVLKDIKRLWQIRNCLLLLDYDDPSADSTKLLLLRCYMQPLFLKTDEGRRILTYTFGLHVPLIEDIHATIKNNIPSSSRSLQEYYGEVYFRAWRSSSGPYREKIENFCIQDLMHHAIHARISRPSIAAALKRILDQFHREKKQSGVDKMLLTLYQPIIWRSLKVANAIVRANAAALLFSAFPLHDPDGANEDIDILMQRQFDAFADLLQDPCPNVREVTVK 395 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1153.1306.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1153.1306.1 >prot_Ecto-sp9_F_contig1153.1306.1 ID=prot_Ecto-sp9_F_contig1153.1306.1|Name=mRNA_Ecto-sp9_F_contig1153.1306.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=472bp MDDRKALIAAVGEAAAAAPAGEGEEGSATRYESLLVFVKRHSSRSDDLNLback to top mRNA from alignment at Ecto-sp9_F_contig1153:3504..10995- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1153.1306.1 ID=mRNA_Ecto-sp9_F_contig1153.1306.1|Name=mRNA_Ecto-sp9_F_contig1153.1306.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=7492bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1153:3504..10995- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1153:3504..10995- >mRNA_Ecto-sp9_F_contig1153.1306.1 ID=mRNA_Ecto-sp9_F_contig1153.1306.1|Name=mRNA_Ecto-sp9_F_contig1153.1306.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2832bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1153:3504..10995- (Ectocarpus species9 EcSCA_722f female)back to top |