mRNA_Ecto-sp9_F_contig11525.1303.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig11525.1303.1
Unique NamemRNA_Ecto-sp9_F_contig11525.1303.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig11525.1303.1 vs.
Match: EGF-like (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8W7_9PHAE)

HSP 1 Score: 609 bits (1570), Expect = 4.490e-218
Identity = 289/340 (85.00%), Postives = 295/340 (86.76%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAFSGTEFWNWDFNGNDPTLHR----------------------------------------PYETADYIESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEEYPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 900
            +CVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAFSGTEFW+WD+N N+P + R                                        PY TADYI+SALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEEYPCDELIVVTFDG QVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI
Sbjct:  104 ECVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAFSGTEFWSWDYNANNPIVQRYSALSLNFTGQTFALTFTSAKEERFTTIPINLDGDGYTTMPYVTADYIKSALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEEYPCDELIVVTFDGAQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 443          
BLAST of mRNA_Ecto-sp9_F_contig11525.1303.1 vs.
Match: EGF-like (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF98_9STRA)

HSP 1 Score: 226 bits (576), Expect = 2.130e-65
Identity = 138/333 (41.44%), Postives = 177/333 (53.15%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCP-----NDCSGHGRCMFADDLPYGVNLGSFYHDQNNNTDHLGE-LGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKY---QKQAICLYSSGTAFSGTEFWNWDFNGNDPTLHRPYETADY----------IESALEGLPNGVIDSVQV-----------DVAYNATGSVIAGEVIEEYPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHR----SYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTAL 897
            +C CF GYEGK C RMSCP     NDCSGHGRC+FA+D+PYGVN+GS        T  L   LGD+NGNDA TF Y+ WD  +TR+C CD  +EGVDC  RSCP+G+DVM    ++V S+        A   + +    S  EF           L     T D           +++ALE LP GVID+V V           +  +  +GS +A   + +      I V F G  VQG Q+LLEVEW+ C +GCTP+L G+  S +         + G  R     Y+    +    +Y CGGRGKCDYT+GEC CF G+ GL C  QTAL
Sbjct:  103 ECNCFAGYEGKACGRMSCPMDKDGNDCSGHGRCLFANDVPYGVNVGSA-------TQLLDTFLGDSNGNDAETFTYYNWDNERTRLCVCDAEWEGVDCGKRSCPKGDDVMDTNGDQVQSILLIADPGSATANFLAADGVSDAEFALTFTTLTGERLTTGPITIDLGAAATTLATDVKTALEALPGGVIDTVDVVATLGMPTWNANTYWTLSGSPLA-PTVTDLNAGVGIYVKFSGKNVQGKQNLLEVEWKECLEGCTPRLAGIQESALALTNARTTGSYGYARVIDTKYLSSTATHVNTAYTCGGRGKCDYTSGECQCFDGFVGLACGEQTAL 427          
BLAST of mRNA_Ecto-sp9_F_contig11525.1303.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQM4_9STRA)

HSP 1 Score: 212 bits (539), Expect = 5.060e-62
Identity = 140/372 (37.63%), Postives = 174/372 (46.77%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAFSGTEFWNWDFNG------NDPTLHRP----------------------YET--------------------ADYIESALEGLPNGVIDSVQVD----------VAY--------NATGSVIAGEVIEEYPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDG------LPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 900
            +C CFEG+ GKGC  M+CPNDCSGHG C + +D  YGV  G +Y         +  L     + AV  +   W  GK R+CRCD GY  +DCS R CP+GNDV+ ERLN V ++KYQKQ   L ++G    G  +   D N       NDP + RP                      Y T                    A  +E+ALE LPN VID V V+           AY        + TGS+ +        C     V F GT V G Q+LLEV    CGDGCTP L+           T++       Y      S+V +   ADY S+ CG RGKCDY+TG C CF GY G  C+TQTALI
Sbjct:   88 ECDCFEGFTGKGCGVMTCPNDCSGHGTCEYLEDYGYGVVWGDYYDGS------IATLTGLGTDAAVIPQPPDWATGKMRICRCDAGYTDLDCSRRMCPKGNDVLDERLNLVTALKYQKQNFTLVAAGAKGDGIVY--DDANNVVCNLENDPDIDRPGCWQDFVGRSFALKFTSKLNQSYTTIPLVLNVSDGAKINTEMNNFATVVENALESLPNYVIDDVDVECDLIYLQANTTAYRTKTFQPVDGTGSIYSLAAYPSLTC----TVEFIGTTVMGPQNLLEVVADTCGDGCTPMLNNSVNLKTATNITVEDYIGTKDYITDDLFSFVAEDVRADYNSFECGRRGKCDYSTGLCECFEGYTGDRCQTQTALI 447          
BLAST of mRNA_Ecto-sp9_F_contig11525.1303.1 vs.
Match: EGF-like (domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RZM9_9ARCH)

HSP 1 Score: 206 bits (524), Expect = 2.260e-61
Identity = 125/316 (39.56%), Postives = 162/316 (51.27%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAFSGTEFWNWDFNGNDPT-LHRPYETAD---------------YIESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEEYPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 900
            +C CF GYEGK C R SCPNDCSGHGRC++ ++LPYG     +           G   D +  D  TF+ + WD  KTR C CDP Y  VDCS R CP G DVM +R +      YQ Q I +  S  +F+ +      F     T L+  + TA                ++E ALE LPNGVID+V V  +Y+   +V+             + VTF G  VQG QHLL V+   CGDGC+PKL G+                G++  + QQ  ++D+ SY CG RGKCDY+TG C CF GY G  C T + L+
Sbjct:   32 ECECFPGYEGKACQRSSCPNDCSGHGRCIYMENLPYGAVAPDY-----------GAYTDFSVQDPKTFDNYFWDRSKTRGCLCDPEYGDVDCSKRMCPYGTDVMDQRSDVTVDGLYQVQQIQIKVSTKSFNDSSTAGDTFALTFKTKLNETFTTAPIPLFDGRTDFRQFILHVEQALERLPNGVIDNVDVAGSYSVYSNVVN------------LNVTFVGNTVQGPQHLLTVKDYLCGDGCSPKLSGVETHP------------GSNLIFEQQ--ASDFNSYECGRRGKCDYSTGVCNCFAGYSGNTCGTISCLV 310          
BLAST of mRNA_Ecto-sp9_F_contig11525.1303.1 vs.
Match: Hypothetical (protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L985_9EUKA)

HSP 1 Score: 206 bits (523), Expect = 2.100e-60
Identity = 125/325 (38.46%), Postives = 159/325 (48.92%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAFSGTEFWNWDF-------------------------NGNDPTLHRPYETADYIESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEEYPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 900
            +C CF GYEGKGC R SCPNDCSGHGRC + +D+P+G     + +        L +       D  TF Y+GWD  KTR C CDP Y  VDCS R C  GNDVM +R + +   +YQ Q +   +  +     +  +  F                          G    LH   E    IE+ALE LPN VID+V+V    +AT  +                +TF G  VQG Q+LL V    CGDGC+PKL GL L  ++TQ              + ++  AD+ SY CG RGKCDYTTG+C CF GY GL C T   L+
Sbjct:   91 ECECFPGYEGKGCQRTSCPNDCSGHGRCKYIEDMPFGQVQADYQNAVTGIDSFLPQ-------DPHTFPYYGWDSYKTRGCECDPEYGDVDCSKRLCQHGNDVMDQRDDLLDPHQYQVQKLNFLADQSYLENYQNRDRTFALTFKSKLNETFTTLPINFYSDTGGTGGTDGLH---EFVLDIENALERLPNRVIDNVEVHAGVDATNHIHVN-------------ITFVGDNVQGPQNLLTVRSYLCGDGCSPKLVGLELE-LETQT-------------ITELTPADFNSYECGRRGKCDYTTGQCQCFAGYTGLSCSTIACLV 378          
BLAST of mRNA_Ecto-sp9_F_contig11525.1303.1 vs.
Match: EGF-like (domain-containing protein n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDW6_AURAN)

HSP 1 Score: 206 bits (523), Expect = 2.810e-60
Identity = 130/329 (39.51%), Postives = 169/329 (51.37%), Query Frame = 1
Query:    4 CVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTF-EYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICLYSSGTAFSGTEFWNWDFNGNDPTLHRPY--------------------ETADY---------IESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEEYPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 900
            C CFEGY GKGC   +CPNDCSGHG C +A+D P+G   G +Y  ++N+   LG        D VT  +   WD GK ++C C+PGY  +DCS R CP+GNDV+ ERLN   S  + + A    +S   F+G    NWD +     L++ +                    ET  +         +  AL  LPN VID V VD +       +   +   YP    +V  F G  V G Q+LLEVE   C DGCTPKL+     T      ++P       S+V++  +ADY SY CG RGKCDY+TGEC CF GY G  C+ QTALI
Sbjct:   89 CECFEGYTGKGCGIQTCPNDCSGHGACTYAEDAPFGTVWGDYYTAKSNSLTGLGT-------DPVTLAQAPAWDSGKVKLCVCEPGYTDIDCSRRMCPKGNDVLDERLN--LSNNWARGA----TSIAGFNGQNSDNWDPDCFKDFLNKSFALTFTSKMNQSYTTKPLVLNETNVFNISKAFSGDVRKALVELPNYVIDDVDVDCSLQY----VHQNLTSLYPALSCLVA-FTGDTVMGPQYLLEVETDECLDGCTPKLENPGNVT------SMPDIF----SFVKEQVTADYNSYECGRRGKCDYSTGECECFEGYMGDRCQMQTALI 389          
BLAST of mRNA_Ecto-sp9_F_contig11525.1303.1 vs.
Match: Tubular (mastigoneme protein n=1 Tax=Ochromonas danica TaxID=2986 RepID=C4B7Q7_OCHDN)

HSP 1 Score: 192 bits (489), Expect = 1.800e-55
Identity = 118/317 (37.22%), Postives = 157/317 (49.53%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVM-----------------VERLNRVASVKYQKQAICLYSSGTAFSGTEFWNWDFNGNDPTLHRPYETADYIESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEEYPCDEL-IVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTAL 897
            +C CF+GYEGKGC R +CPN CSGHG C + ++L +G     +      +  +  E       D  TF YHGWD  K R C CDP Y  VDCS R CP GNDV+                 ++ +N++  ++ Q  A+   S         F  +    +D  L+   +    ++ AL  LPN VID V V  A N            +Y  D L + +TF G  VQG Q+LL VE   C DGCTPK+ G+ + T+  Q            S + ++ +ADY S+ CG RGKCDY TG C CFTGY G +C T T L
Sbjct:   92 ECQCFDGYEGKGCQRSTCPNACSGHGTCEYIEELAFGETWNDY------SKQYFIE-------DPKTFPYHGWDNRKIRTCVCDPTYGDVDCSKRLCPYGNDVLDIQDNSIITNYQIQQIRIKAINQLQGLRTQTFALTFKSK----LNETFTTYPIVFDDSDLN---DFVHDVQLALLKLPNRVIDGVSV--AAN-----------RDYATDYLNLNITFTGNNVQGKQNLLVVESYECSDGCTPKITGIDVQTLYNQ----------KHSNISEVLAADYYSFECGRRGKCDYNTGLCNCFTGYTGDNCNTMTTL 365          
BLAST of mRNA_Ecto-sp9_F_contig11525.1303.1 vs.
Match: Sexually (induced protein 2 n=1 Tax=Thalassiosira weissflogii TaxID=1577725 RepID=Q9Y0F7_THAWE)

HSP 1 Score: 182 bits (463), Expect = 2.050e-51
Identity = 125/339 (36.87%), Postives = 161/339 (47.49%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVM-----VERLNRVASVKY-----QKQAICLYSSGTAFSGTEFWNWDFNG-----------NDPTLHRP--YETAD-----YIESALEGLPNGVIDSVQVDV--AYNATGSVIAGEVIEEYPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLP---------LSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 900
            +C CF GYEGK C R SCPNDCSGHG C +  DL +G+    +Y    N    LG  G T        EY  WD  + R C CD G++G+ C+ R CP GNDVM      +  + +    Y     Q Q + LY +       E  N +FN            N+  + +P  ++T D     YIE+AL+ LPN VID V V V  + NA G VI               VTF G  VQG QH LE+    C +GCTP++ GL          LST++        TIG+H S+             CG RGKCDY +G C CF+G+ G  C   TAL+
Sbjct:   91 ECDCFPGYEGKSCGRQSCPNDCSGHGTCEYMKDLEFGIVYNEYYDGSTNALSGLGAGGKT-----FDHEYF-WDRDRARACICDAGWQGLSCNMRMCPYGNDVMDVIPGFDENSLLGMPGYGNEVAQVQTVTLYDA-------ELDNLNFNSKSFAIQFTSKLNETYVTQPISWDTTDSVLDGYIETALKKLPNKVIDDVDVSVDSSVNANGVVID--------------VTFTGAAVQGKQHKLEILQDACEEGCTPRITGLTNIRTFSDTTLSTVEIS------TIGSHNSFE------------CGRRGKCDYDSGLCKCFSGFTGDTCSILTALV 384          
BLAST of mRNA_Ecto-sp9_F_contig11525.1303.1 vs.
Match: EGF-like (domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R988_THAOC)

HSP 1 Score: 181 bits (458), Expect = 1.340e-50
Identity = 116/321 (36.14%), Postives = 161/321 (50.16%), Query Frame = 1
Query:    1 QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYHDQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVM-----VERLNRVASVKY-----QKQAICLYSSG---TAFSGTEF---WNWDFNGNDPTLHRPYETAD-----YIESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEEYPCDELIVVTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 900
            +CVC+ GYEGKGC R SCP  CSGHG C +  DL +G+    +Y   + +TD L  LG        TF+ H +D  ++RMC CD G++G+ C  R CP GND+M      +  + +    Y     Q Q + L+ +    + F G  F   +    N    T    ++T D     YIESAL  LPNGVID V V V  N   S +            ++ VTF G  VQG QH LE+    C  GC+P++ GL  + + T  D     +    S+VQ      + S+ CG RGKC+   GEC+CF G+ G  C + +AL+
Sbjct:   95 ECVCYAGYEGKGCGRQSCPGQCSGHGTCEYVKDLSFGIVHNEYY---DGSTDALSGLGIG----GRTFQDHSFDSDRSRMCVCDAGWDGLACQTRMCPYGNDIMDVIPGFDENSLLGMPGYGNEYAQVQTVTLFDANLDNSNFDGQTFAVKFTSKLNETFVTQPIAWDTTDAVLAGYIESALLKLPNGVIDDVAVTVDSNDNNSGV------------ILDVTFTGESVQGKQHKLEILADKCEVGCSPRITGL--ANLRTFSDT---ALSQTLSHVQISTPGSHNSFECGRRGKCNRKNGECSCFEGFTGSACGSLSALV 391          
BLAST of mRNA_Ecto-sp9_F_contig11525.1303.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UKF7_9STRA)

HSP 1 Score: 175 bits (443), Expect = 8.650e-48
Identity = 126/350 (36.00%), Postives = 163/350 (46.57%), Query Frame = 1
Query:    4 CVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYH----DQNNNTDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQGNDVMVERLNRVASVKYQKQAICL--YSSGTAFSGTE----FWNWDFNGND------------------------PTLHRPYETADYIESALEGLPNGVIDSVQ-----VDVAY-NATGSVIAGEVIEEYPCDELIVVTFDGTQVQGNQHLLEVEWRPCGD---------GCTPKLDG--LPLSTIDTQFDNLPYTIGAHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI 900
            C CF+GY GK C R +CPNDC+GHG C +  +LPYG   G +      D NN       +G    N +   +   +D  KTR C+CD GY G DCS R CP GND+    L+   S   Q QAI L  Y+  T  + T+    + N     +D                        P       T   I +AL  LPN VI   +     + V Y +A G + +G  +     D  I + F G+ VQG QHLLEV    CG+         GC  ++ G  +P    D    N  Y      S+V+Q Q+AD +SY CG RGKCDY TG C CF+GY G HCE  TAL+
Sbjct:  122 CSCFDGYSGKACQRTTCPNDCNGHGTCEYIAELPYGTVFGDYVDGAAIDTNNPL-----VGAKPFNFSSDIDSRFFDAYKTRQCKCDAGYGGADCSLRKCPFGNDI----LDVDGSSNNQIQAISLHAYAEATPAATTDAVAAYTNSALAADDAKRAAMRDFALAFTAKTGERFVTKPIRFGADTTETAILNALMELPNHVIGRTENTVDPITVTYTHAAGDMTSGGGVATDMYD--ITIEFKGSNVQGTQHLLEVLTEECGEQFEYPGAQAGCAQQMYGTTIPQFATDDGATNAVY------SHVKQSQAADLQSYECGRRGKCDYDTGICQCFSGYKGAHCEDLTALV 454          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11525.1303.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
EGF-like4.490e-21885.00domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
EGF-like2.130e-6541.44domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical5.060e-6237.63protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
EGF-like2.260e-6139.56domain-containing protein n=1 Tax=archaeon TaxID=1... [more]
Hypothetical2.100e-6038.46protein n=1 Tax=Coccolithus braarudii TaxID=221442... [more]
EGF-like2.810e-6039.51domain-containing protein n=3 Tax=Aureococcus anop... [more]
Tubular1.800e-5537.22mastigoneme protein n=1 Tax=Ochromonas danica TaxI... [more]
Sexually2.050e-5136.87induced protein 2 n=1 Tax=Thalassiosira weissflogi... [more]
EGF-like1.340e-5036.14domain-containing protein n=1 Tax=Thalassiosira oc... [more]
Hypothetical8.650e-4836.00protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11525contigEcto-sp9_F_contig11525:196..2818 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score642.9
Seed ortholog evalue7.5e-182
Seed eggNOG ortholog2880.D8LDD6
EggNOG free text desc.regulation of canonical Wnt signaling pathway involved in osteoblast differentiation
EggNOG OGsKOG1225@1,KOG1225@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSecreted EGF-like domain protein OCM2
Ec32 orthologEc-25_001650.1
Exons4
Model size903
Cds size903
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11525.1303.1prot_Ecto-sp9_F_contig11525.1303.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig11525 196..2818 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928407.991804-CDS-Ecto-sp9_F_contig11525:195..5521622928407.991804-CDS-Ecto-sp9_F_contig11525:195..552Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11525 196..552 +
1692277861.0894837-CDS-Ecto-sp9_F_contig11525:195..5521692277861.0894837-CDS-Ecto-sp9_F_contig11525:195..552Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11525 196..552 +
1622928408.0046208-CDS-Ecto-sp9_F_contig11525:1139..12281622928408.0046208-CDS-Ecto-sp9_F_contig11525:1139..1228Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11525 1140..1228 +
1692277861.0992746-CDS-Ecto-sp9_F_contig11525:1139..12281692277861.0992746-CDS-Ecto-sp9_F_contig11525:1139..1228Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11525 1140..1228 +
1622928408.016729-CDS-Ecto-sp9_F_contig11525:1348..15231622928408.016729-CDS-Ecto-sp9_F_contig11525:1348..1523Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11525 1349..1523 +
1692277861.1073487-CDS-Ecto-sp9_F_contig11525:1348..15231692277861.1073487-CDS-Ecto-sp9_F_contig11525:1348..1523Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11525 1349..1523 +
1622928408.0322216-CDS-Ecto-sp9_F_contig11525:2536..28181622928408.0322216-CDS-Ecto-sp9_F_contig11525:2536..2818Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11525 2537..2818 +
1692277861.115147-CDS-Ecto-sp9_F_contig11525:2536..28181692277861.115147-CDS-Ecto-sp9_F_contig11525:2536..2818Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11525 2537..2818 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig11525.1303.1

>prot_Ecto-sp9_F_contig11525.1303.1 ID=prot_Ecto-sp9_F_contig11525.1303.1|Name=mRNA_Ecto-sp9_F_contig11525.1303.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=301bp
QCVCFEGYEGKGCARMSCPNDCSGHGRCMFADDLPYGVNLGSFYHDQNNN
TDHLGELGDTNGNDAVTFEYHGWDEGKTRMCRCDPGYEGVDCSYRSCPQG
NDVMVERLNRVASVKYQKQAICLYSSGTAFSGTEFWNWDFNGNDPTLHRP
YETADYIESALEGLPNGVIDSVQVDVAYNATGSVIAGEVIEEYPCDELIV
VTFDGTQVQGNQHLLEVEWRPCGDGCTPKLDGLPLSTIDTQFDNLPYTIG
AHRSYVQQIQSADYESYVCGGRGKCDYTTGECACFTGYYGLHCETQTALI
*
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mRNA from alignment at Ecto-sp9_F_contig11525:196..2818+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig11525.1303.1 ID=mRNA_Ecto-sp9_F_contig11525.1303.1|Name=mRNA_Ecto-sp9_F_contig11525.1303.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2623bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11525:196..2818+ (Ectocarpus species9 EcSCA_722f female)
CAGTGCGTGTGCTTCGAGGGGTACGAAGGGAAGGGCTGCGCCCGCATGTC GTGCCCCAACGACTGCTCCGGCCACGGCCGGTGCATGTTCGCGGACGACC TCCCGTACGGCGTTAACCTGGGGTCCTTCTACCACGACCAGAACAACAAC ACGGACCACCTGGGCGAGCTCGGAGACACCAACGGCAACGACGCCGTGAC GTTCGAGTACCACGGGTGGGACGAGGGCAAGACCCGCATGTGCCGCTGCG ACCCCGGCTACGAGGGGGTCGACTGCTCGTACCGCTCCTGCCCCCAGGGG AATGACGTCATGGTGGAGAGGCTCAACCGCGTCGCCTCCGTCAAGTATCA GAAGCAGGTGTAGTGTGTGCTTTCTTTTAATATTGTTAGCACCGACCGCG CTAACCTGCTGACCAATGAAAATACGTCAGTCTCAGTGCGGATGAGAACT CAAAATGCCGCTGGGACCCCGCCAGTAGGCGTCTTGGGTGGGGGGGCTAA CGTGTGCGTGTGTGTGTTCGTCCTATCTATTCTGGCGCCAGTTTCTAGGC CTGTCGGCGTAAATATCTGACGTAGCAGGCGTGTGTGTGTGTGTGTGCGT GTGTGTGCTTTTTTTTCTGTATTTTGTTGCACGGCCGCCGCGACAAGGGT TCCAACAAGTTTTATTTTTATTCTTTGTTTTCTTTTTCCCACGCTTGTTT TTGCGCTACCAGGTAAGAAGAGAGAAGAAAGACGGTTTCTGCCCCGCTCC CTGATGATTTTCGTTTTTTTTTGTTTTGGGGGTCTTGGCAATAATAGACC AGCATGTAGCCGAGATCGTTTCATTCGACCGTGGCTGTATCTCGACCTGG TAGCCTTTCCGTATCAATATTTTCAAAAACACAACGTAACTTCTGCATCT TGACCCTCCCCCCCCGCCCTGGTCCAACCCAATCCGATCCGCAGGCCATC TGCCTGTACAGCTCGGGCACAGCCTTCTCGGGGACCGAGTTCTGGAACTG GGACTTCAACGGGAACGACCCGACCCTGCACAGGTATAGCGCTCTCTCGC TCAACTTCACGGGGCAGACGTTCGCCCTCACCTTCACCTCGGCCAAGGAG GAGCGGTTCACGACCATCCCCATCAACCTCGACGGCGACGGCTTCACGAC CAGGCCGTACGAGACGGCGGACTACATCGAGAGCGCCCTGGAGGGCCTTC CCAACGGCGTCATCGACTCGGTCCAGGTGGACGTGGCCTACAACGCGACC GGGTCGGTGATCGCCGGGGAGGTGATCGAGGAGTACCCCTGCGACGAGCT CATCGTCGTCACGTTCGACGGCACACAGGTATGAAAACATGTGTAGAGTG TGTGTTGTTTTTGCTTTATTGTTTCTTACAGTACGAAATATACAATCACG GAAAGACTAACATATAACCAACGGGGATGCGTTGAATGTTAGAAAAAGGC TATCCTAGACCACTTCGTCAGCCCTGACCAAGTAGTCTAAGGGATAAGCC TTTGTTCGGACCCCTCGCCAGGCGCTGCCAGAAAAATAACTTACGGTGAT TCGAAGCTGATCCAGCCGGGAGGGTACGAGCCGGGAGATATCTCTTGACT AAGTAGTCTCGAATTCATGTGTACCCACAGGAAGAGTCCGGGATAGATTA TTCATAGAAAATACACGCAGAGTTATTGTTCTTATGCAGCACTCTGTCGT CGTCGCATCGTGGTGCGCGTGCAAGGAGGACGGCCTCTACAAAAGGGGTG GGTTTTGGTCTAGACGCGGCCGCGTTGTGTATGGCGCCACAAAACTTATT CCTTTTGGTAGCTGTGATATATATAACATGTCGTACGCGGATGTTTTCGT GTTTGGTCTTACCCAGGATTCGGTTGATAACTCTTGCGTCGCTAGTTTTC CCGTCTCCACATTTTTTTCATTTACGTAGATTCTGTTCTTGTTAGAAGAC ACCACGACGGCGGAACAACTTCTGTCACGAGGTTGTCGTCGTGGTCACCT TCCATGGCACCACCCGGTGTCTAAGGCCAACCTCGATGGAGTTAGCCACG TACAACACCAAGCCTTTCCGCCGCTGCTCCGTCGCATTGCTGCAACATAA CATGCTCTTCCTCGATTTTTCCGCTGAGGCTTCATCGTGTACATCAGCGT TCCTTCCGACTGTCATAGACTCAGCTCGTCACGCTTCAACGATTTCTTGT TGAGACAAGGCGACAATTCTCTCTTCTCCTCTTGTGAGTCCCTCAACACC CGCGTCATGGACCCAACCCAAACCCGTGCCTGGACTGAAGGGTAGCTACC GTATGCTGACCCCCCCCCCCCCCCCCCCACCGACATTCCAGGTCCAGGGA AACCAGCACCTGTTGGAGGTCGAGTGGAGGCCCTGCGGTGACGGTTGCAC CCCCAAGCTCGACGGCCTCCCGCTGTCCACCATCGACACCCAGTTCGACA ACCTGCCCTACACCATCGGGGCGCACCGGTCGTACGTGCAGCAGATCCAG TCGGCGGACTACGAGTCCTACGTCTGCGGCGGCCGCGGGAAGTGCGACTA CACCACGGGGGAGTGCGCGTGCTTCACGGGGTACTACGGCCTCCACTGCG AGACGCAGACCGCGCTCATCTGA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11525:196..2818+

>mRNA_Ecto-sp9_F_contig11525.1303.1 ID=mRNA_Ecto-sp9_F_contig11525.1303.1|Name=mRNA_Ecto-sp9_F_contig11525.1303.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1806bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11525:196..2818+ (Ectocarpus species9 EcSCA_722f female)
CAGTGCGTGTGCTTCGAGGGGTACGAAGGGAAGGGCTGCGCCCGCATGTC
GTGCCCCAACGACTGCTCCGGCCACGGCCGGTGCATGTTCGCGGACGACC
TCCCGTACGGCGTTAACCTGGGGTCCTTCTACCACGACCAGAACAACAAC
ACGGACCACCTGGGCGAGCTCGGAGACACCAACGGCAACGACGCCGTGAC
GTTCGAGTACCACGGGTGGGACGAGGGCAAGACCCGCATGTGCCGCTGCG
ACCCCGGCTACGAGGGGGTCGACTGCTCGTACCGCTCCTGCCCCCAGGGG
AATGACGTCATGGTGGAGAGGCTCAACCGCGTCGCCTCCGTCAAGTATCA
GAAGCAGCAGTGCGTGTGCTTCGAGGGGTACGAAGGGAAGGGCTGCGCCC
GCATGTCGTGCCCCAACGACTGCTCCGGCCACGGCCGGTGCATGTTCGCG
GACGACCTCCCGTACGGCGTTAACCTGGGGTCCTTCTACCACGACCAGAA
CAACAACACGGACCACCTGGGCGAGCTCGGAGACACCAACGGCAACGACG
CCGTGACGTTCGAGTACCACGGGTGGGACGAGGGCAAGACCCGCATGTGC
CGCTGCGACCCCGGCTACGAGGGGGTCGACTGCTCGTACCGCTCCTGCCC
CCAGGGGAATGACGTCATGGTGGAGAGGCTCAACCGCGTCGCCTCCGTCA
AGTATCAGAAGCAGGCCATCTGCCTGTACAGCTCGGGCACAGCCTTCTCG
GGGACCGAGTTCTGGAACTGGGACTTCAACGGGAACGACCCGACCCTGCA
CAGGCCATCTGCCTGTACAGCTCGGGCACAGCCTTCTCGGGGACCGAGTT
CTGGAACTGGGACTTCAACGGGAACGACCCGACCCTGCACAGGCCGTACG
AGACGGCGGACTACATCGAGAGCGCCCTGGAGGGCCTTCCCAACGGCGTC
ATCGACTCGGTCCAGGTGGACGTGGCCTACAACGCGACCGGGTCGGTGAT
CGCCGGGGAGGTGATCGAGGAGTACCCCTGCGACGAGCTCATCGTCGTCA
CGTTCGACGGCACACAGGCCGTACGAGACGGCGGACTACATCGAGAGCGC
CCTGGAGGGCCTTCCCAACGGCGTCATCGACTCGGTCCAGGTGGACGTGG
CCTACAACGCGACCGGGTCGGTGATCGCCGGGGAGGTGATCGAGGAGTAC
CCCTGCGACGAGCTCATCGTCGTCACGTTCGACGGCACACAGGTCCAGGG
AAACCAGCACCTGTTGGAGGTCGAGTGGAGGCCCTGCGGTGACGGTTGCA
CCCCCAAGCTCGACGGCCTCCCGCTGTCCACCATCGACACCCAGTTCGAC
AACCTGCCCTACACCATCGGGGCGCACCGGTCGTACGTGCAGCAGATCCA
GTCGGCGGACTACGAGTCCTACGTCTGCGGCGGCCGCGGGAAGTGCGACT
ACACCACGGGGGAGTGCGCGTGCTTCACGGGGTACTACGGCCTCCACTGC
GAGACGCAGACCGCGCTCATCTGAGTCCAGGGAAACCAGCACCTGTTGGA
GGTCGAGTGGAGGCCCTGCGGTGACGGTTGCACCCCCAAGCTCGACGGCC
TCCCGCTGTCCACCATCGACACCCAGTTCGACAACCTGCCCTACACCATC
GGGGCGCACCGGTCGTACGTGCAGCAGATCCAGTCGGCGGACTACGAGTC
CTACGTCTGCGGCGGCCGCGGGAAGTGCGACTACACCACGGGGGAGTGCG
CGTGCTTCACGGGGTACTACGGCCTCCACTGCGAGACGCAGACCGCGCTC
ATCTGA
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