mRNA_Ecto-sp9_F_contig11515.1293.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig11515.1293.1
Unique NamemRNA_Ecto-sp9_F_contig11515.1293.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: MyTH4 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTX8_ECTSI)

HSP 1 Score: 593 bits (1530), Expect = 5.290e-213
Identity = 298/299 (99.67%), Postives = 298/299 (99.67%), Query Frame = 1
Query:    1 MEGLPQNYRDNITIDNGVEIVWVNQKGQVIPKDKAGAASSAVEDDADVVVGMPRVASIRKSAVETELNNSSLPASPGGTRRTSVAGTVSPSPQLIGAWFTNGTDTAGEGAPTSPAGSTGPPDTEDDDADPEGHPCMALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQTYAQYALSALHK 897
            MEGLPQNYRDNITIDNGVEIVWVNQKGQVIPKDKAGAASSAVEDDADVVVGMPRVASIRKSAVETELNNSSLPASPGGTRRTSVAGTVSPSPQLIGAWFTNGTDT GEGAPTSPAGSTGPPDTEDDDADPEGHPCMALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQTYAQYALSALHK
Sbjct:    1 MEGLPQNYRDNITIDNGVEIVWVNQKGQVIPKDKAGAASSAVEDDADVVVGMPRVASIRKSAVETELNNSSLPASPGGTRRTSVAGTVSPSPQLIGAWFTNGTDTGGEGAPTSPAGSTGPPDTEDDDADPEGHPCMALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQTYAQYALSALHK 299          
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: KIN14E (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RIC2_SYMMI)

HSP 1 Score: 123 bits (309), Expect = 1.590e-27
Identity = 76/235 (32.34%), Postives = 120/235 (51.06%), Query Frame = 1
Query:  406 MALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQT--YAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQVGIGVALN---PFGLW 1095
            M +E Y  + +N  RKG+  K RT ++ LLSWK + I   L    + +  +++E V  F ++  YMGD+ + + G      +   ++ + +E RDE+ CQ+ KQTTSNPD  S  +GWQL++  LAV  PS  L+P    +C       +P    +A+  L  + K S L PR+  P  +E+ AL +   V +     D     + ADSWT+  + E  +   V +    PF L+
Sbjct:   51 MNMEQYGEKFFNFDRKGMF-KGRTTIDKLLSWKSELIKTSLR---SLSGDMATEAVQQFRNVTGYMGDRSSTKGGGDHAMKILNHMMLAPEELRDELYCQIVKQTTSNPDPFSTEKGWQLLMICLAVFPPSSDLMPHLMGYCAANLQSEVPNVAGFAEICLHRIPKISHLGPRRELPTKIELEALRRGGTVNLRFFFLDDKYCTLRADSWTTARETEDTIAKLVNITNDKPFSLF 281          
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Unconventional (myosin-VIIa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8S4_9STRA)

HSP 1 Score: 124 bits (311), Expect = 1.960e-27
Identity = 79/237 (33.33%), Postives = 126/237 (53.16%), Query Frame = 1
Query:  406 MALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPS----KGLIPCFRKHCELGPVGSIPQTYAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQVGIGVALN---PFGLW 1095
            + +  YA + +   RKG   KK   +  LL+WKG++I   L    + A  +  + V  F +I+ YMGDK +++     +K +    + + +E  DE+ CQ+ KQT +NPDA S LRGW+L+     +  PS    K L+   R+  E  P   + +  A+YAL  + K   L  R  AP  +EI A+ ++S V + V L DG  +++ A+SWTSV D+ + VG  + +    PF L+
Sbjct:  305 LNMNNYAEQYFKLTRKGFATKKTVHVADLLTWKGEKIKSSLHPLSDPA--LVHDAVLAFSNILCYMGDKPSRDPMDNALK-IFKITVGAPEELLDEVYCQLYKQTNANPDATSCLRGWELMAMCAGLFPPSSKLEKYLLSYIRQTTESQPYPGVGKL-AEYALLRIVKSLDLGARSEAPTKIEIAAVREISPVKIRVTLLDGRILDMEAESWTSVADMNQAVGNQLKIEDATPFSLF 537          
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2Z0_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.140e-26
Identity = 73/231 (31.60%), Postives = 115/231 (49.78%), Query Frame = 1
Query:  421 YAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQTYAQYALSALH---KESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQVGIGVALN---PFGLW 1095
            YA + +N  RKG+ G K T  E + SWKG +  +  ++     K +  E V CF ++  +MGD+ + ++ M     L   +L S ++ R+EI CQ+CKQT +NP   S L GWQL++  LA   P K L      +C        P    QYA  ALH   + + L PR+  P  VE+ A  +L    V V   DG  + +  +SWT+    ++ + + + +    PF ++
Sbjct:  247 YAEKNFNYDRKGIFGMKTTT-EKITSWKGGRDLIKTSLITLNDKNLQGEAVQCFRNVTGFMGDRNSNKTNMDHAYKLLNCMLVSIEDLRNEIYCQICKQTKANPSMESTLAGWQLMILCLAAFPPGKLLKDYLMAYCAENIREESPPQVRQYAEFALHCVPRITELGPRRELPTIVEMEACKRLQPATVRVNFLDGRYIMMPVNSWTTAELFKEMICLRLGIRTMKPFAIF 476          
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: KIN14E (protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812W082_9DINO)

HSP 1 Score: 119 bits (299), Expect = 5.090e-26
Identity = 76/221 (34.39%), Postives = 110/221 (49.77%), Query Frame = 1
Query:  421 YAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKA-KESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQTYAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQVGIGVALN 1080
            Y    +N  RKG+ G   T +  +L+WK   I   L       K + S    CF +I  YMGD+ + K+ G    K + T  L+S++E RDE+ CQ+ KQT  NPD +S  +GWQLI       +PS  L+P F  +C+         T AQ A+ AL K S L PR+  P  +E+ A+  L+ V + V   DG    +   SWT+  DL + +   + L 
Sbjct:  367 YGEAYFNRNRKGIFGSATT-VSKMLAWKNSNIRTALKKM--PTKDMESAATQCFRNITGYMGDRSSRKDDGGHAEKVIKT-CLSSSEEIRDEVYCQLAKQTNQNPDQDSRRKGWQLICICAGCFSPSTTLLPHFVHYCKTAYDDPTCGTLAQRAVRALLKSSKLGPRRETPLPMELNAMASLNPVLMRVYHMDGTYEVLPVCSWTTAGDLNRMMAFQLKLT 583          
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Plekhh1 (protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XQK1_9DINO)

HSP 1 Score: 115 bits (287), Expect = 2.360e-24
Identity = 80/235 (34.04%), Postives = 115/235 (48.94%), Query Frame = 1
Query:  397 HPCMALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKG----LIPCFRKHCEL-GPVGSIPQTYAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRL-QDGNKVEVM-ADSWTSVTDLEKQVGIGVALN 1080
            HP    E YA + +N  RKG+ GKK T ++ + +WK   I   L       K + ++   CF +I  YMGD+K ++      + L    L + QE RDE+ CQ+ KQT  NP+A S LRGWQL         PS      L   F +H +  G +G     YA+Y L  + K + L PR+  P  +EI A   +   P +VR+ Q   + EVM   SWT+  DL K +   + + 
Sbjct:  207 HPTKNFEEYAADYFNLNRKGIFGKKTT-VDKITAWKADVIKTSLRKM--PGKDLETQATQCFRNITGYMGDRKTQKEDGGHAEKLMKNSLHAPQELRDEVYCQIMKQTNKNPNAESCLRGWQLFAVATGAFPPSAEFHDYLTSYFAEHMDDDGMIGR----YARYCLGRVMKSTQLGPRREIPTSMEIDACKSMK--PSVVRVFQLTGEYEVMPVTSWTTAEDLNKMMAFQLGIE 432          
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WK49_9STRA)

HSP 1 Score: 114 bits (284), Expect = 4.740e-24
Identity = 70/222 (31.53%), Postives = 117/222 (52.70%), Query Frame = 1
Query:  406 MALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPS----KGLIPCFRKHCELGPVGSIPQTYAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQV 1059
            + +E Y +E +N  RKG  GKK T ++ +LSWK  +I   L    + A  +  + +  F +I+ YMGDK +K   +     +    + S ++ RDE+ CQ+ KQTT+NPDA S LRGW+L+     +  PS    K L+   R+  E  P   + +  A          + L PRK  P D+EI ++  ++ + + + + DG  + + A+SWT++ +L  Q+
Sbjct:  280 LKMENYVQEYFNLNRKGW-GKKATTVQKILSWKTDRIRTSLHPLSDPA--LVHDAILAFQNILCYMGDKPSKNP-ISNANRIFRITVQSPEDLRDEVYCQLVKQTTNNPDATSTLRGWELLAMCAGLFPPSSKLEKYLLSYMRRTTENQPYPGVGKL-AXXXXXXXXXXTELGPRKEVPTDMEIESVRSITPLTIRIHMLDGAIIPMEAESWTTIKELNDQM 496          
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7X3_9STRA)

HSP 1 Score: 108 bits (271), Expect = 3.170e-22
Identity = 73/234 (31.20%), Postives = 115/234 (49.15%), Query Frame = 1
Query:  385 DPEGHPCMALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPC----FRKHC----ELGPVGSIPQTYAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQVG 1062
            D EGH       +A+  +   RKGL  K RT ++ +  WK   + + L  +C +   + +E +    ++  YMGD+ + ++       L  +LL   QE RDE+ CQ+ KQTT NP + S +RGW+L+LS+L+   PS+ L P     F +H     E         +YA+  L AL +   L  R+  P  +E  A  +   +PV   L DG  + +  D+WT+  DL   +G
Sbjct:  297 DYEGHDFPT---FAKAHFQMHRKGLF-KARTELDKICRWKRATMKLALLESCCRDADLLAEALQAHRNVTGYMGDRSSSKNKDGHRTKLIGQLLRCKQELRDEVYCQLVKQTTLNPSSESAIRGWELLLSVLSTCPPSEQLAPHVGWHFGEHLSSTQESADYTQSVASYAEKCLVALPQVMKLGCRREKPTLLEAQATSKGEGIPVRAYLVDGRHLTIKIDAWTTALDLADALG 526          
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDD6_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.340e-20
Identity = 70/213 (32.86%), Postives = 103/213 (48.36%), Query Frame = 1
Query:  481 METLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHC--ELGPVGSIPQT--YAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLE----KQVGIGVALNPFGLW 1095
            ME +LS K   I   L   C     ++ E V  F +I  YMGD+   +  +     L   +L + ++ RDE+ CQ+ KQTT NP  +S+++GW+L+  +     P + L P    HC  E G   S P+   YA Y L  + K   L PR+  P  VEI A  +L  + V V   D   + +  DSW++  +LE    K +GI     PF L+
Sbjct:    1 MEKILSHKNDTIRTSL---CQLNGDLAQEAVQSFRNITGYMGDRSTTKGAVDHSLKLLNNMLLAPEDLRDEVYCQIIKQTTKNPSVDSNIKGWELLAILAGSFPPGEELKPYVMHHCAAEHGRRHSNPKVRDYAVYVLHRIKKVCRLGPRREIPTPVEIEATRRLLPLNVRVSFLDDRYITLPVDSWSTAKELEGRCAKMLGIKDG-TPFALY 209          
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Uncharacterized (protein AlNc14C241G9461 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WSX2_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 3.140e-18
Identity = 61/201 (30.35%), Postives = 98/201 (48.76%), Query Frame = 1
Query:  469 KRTPM--ETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRK--HCELGPVGSIPQTYAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQV 1059
            +R P+  E  L W+ + +  PL     +   ++ +    F +I  +MG++ + +        L   ++  +   +DEI CQ+CKQ   NP+  + L GW L+   +A  TPS  L P   +  +  +G         A  AL+ALH  S  A RK  P  +EI +L QLS++ +LV L DG  V++   SWT+  +L   V
Sbjct:   75 RRAPLRLEKRLCWEKETLQTPLLPLSKEHTRIALQA---FRNISGFMGNRTSGKDKFDHSDKLLRNIMPRSDNVKDEIFCQICKQINGNPNQEAKLSGWLLLHICIATFTPSASLYPFLERLLYSNIGSKHVEVSQRATAALNALHNSSGKADRKELPTRLEIESLQQLSSMEILVSLIDGTTVQMAIYSWTTCAELNSMV 272          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
MyTH45.290e-21399.67domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
KIN14E1.590e-2732.34protein n=1 Tax=Symbiodinium microadriaticum TaxID... [more]
Unconventional1.960e-2733.33myosin-VIIa n=1 Tax=Hondaea fermentalgiana TaxID=2... [more]
Hypothetical1.140e-2631.60protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
KIN14E5.090e-2634.39protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 Ta... [more]
Plekhh12.360e-2434.04protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 Ta... [more]
Hypothetical4.740e-2431.53protein (Fragment) n=1 Tax=labyrinthulid quahog pa... [more]
Hypothetical3.170e-2231.20protein n=2 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical1.340e-2032.86protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1... [more]
Uncharacterized3.140e-1830.35protein AlNc14C241G9461 n=1 Tax=Albugo laibachii N... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11515contigEcto-sp9_F_contig11515:1374..3600 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score103.6
Seed ortholog evalue2e-19
Seed eggNOG ortholog65071.PYU1_T012558
Preferred namefrmB
KEGG koko:K10359,ko:K10361,ko:K21868
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0010810,GO:0030155,GO:0031156,GO:0043900,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050793,GO:0065007
EggNOG free text desc.Band 4.1 homologues
EggNOG OGs1MBPA@121069,COG5022@1,KOG4229@2759
COG Functional cat.N
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04131,ko04147,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-12_003960.1
Exons3
Model size1101
Cds size1101
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11515.1293.1prot_Ecto-sp9_F_contig11515.1293.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig11515 1374..3600 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928407.2431052-CDS-Ecto-sp9_F_contig11515:1373..20781622928407.2431052-CDS-Ecto-sp9_F_contig11515:1373..2078Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11515 1374..2078 +
1692277860.7475157-CDS-Ecto-sp9_F_contig11515:1373..20781692277860.7475157-CDS-Ecto-sp9_F_contig11515:1373..2078Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11515 1374..2078 +
1622928407.258441-CDS-Ecto-sp9_F_contig11515:2730..29221622928407.258441-CDS-Ecto-sp9_F_contig11515:2730..2922Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11515 2731..2922 +
1692277860.756949-CDS-Ecto-sp9_F_contig11515:2730..29221692277860.756949-CDS-Ecto-sp9_F_contig11515:2730..2922Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11515 2731..2922 +
1622928407.270732-CDS-Ecto-sp9_F_contig11515:3396..36001622928407.270732-CDS-Ecto-sp9_F_contig11515:3396..3600Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11515 3397..3600 +
1692277860.7642214-CDS-Ecto-sp9_F_contig11515:3396..36001692277860.7642214-CDS-Ecto-sp9_F_contig11515:3396..3600Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11515 3397..3600 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig11515.1293.1

>prot_Ecto-sp9_F_contig11515.1293.1 ID=prot_Ecto-sp9_F_contig11515.1293.1|Name=mRNA_Ecto-sp9_F_contig11515.1293.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=367bp
MEGLPQNYRDNITIDNGVEIVWVNQKGQVIPKDKAGAASSAVEDDADVVV
GMPRVASIRKSAVETELNNSSLPASPGGTRRTSVAGTVSPSPQLIGAWFT
NGTDTAGEGAPTSPAGSTGPPDTEDDDADPEGHPCMALEPYAREMYNTVR
KGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVY
MGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDL
RGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQTYAQYALSALHKE
SSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLE
KQVGIGVALNPFGLWV*
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mRNA from alignment at Ecto-sp9_F_contig11515:1374..3600+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig11515.1293.1 ID=mRNA_Ecto-sp9_F_contig11515.1293.1|Name=mRNA_Ecto-sp9_F_contig11515.1293.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2227bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11515:1374..3600+ (Ectocarpus species9 EcSCA_722f female)
ATGGAGGGCCTTCCACAGAACTACCGAGACAATATCACGATCGACAACGG GGTCGAAATTGTCTGGGTGAACCAAAAAGGACAGGTCATCCCGAAAGACA AGGCCGGCGCAGCGTCTTCCGCAGTGGAAGATGATGCGGACGTTGTTGTC GGCATGCCTCGCGTTGCGAGCATCAGGAAATCGGCGGTAGAGACGGAATT GAACAACAGCAGCCTCCCAGCCAGCCCTGGGGGTACGCGCCGCACGTCGG TCGCTGGCACCGTGTCGCCCTCCCCCCAGCTGATCGGAGCGTGGTTTACT AACGGGACGGACACCGCAGGCGAGGGGGCGCCAACTTCTCCCGCGGGCTC CACCGGACCACCGGACACCGAGGACGATGACGCCGACCCCGAAGGCCATC CCTGTATGGCCCTCGAGCCGTATGCCCGCGAAATGTACAACACCGTTCGG AAGGGGCTACTTGGGAAGAAAAGGACCCCAATGGAGACGCTGCTGAGCTG GAAGGGAAAGCAGATCACGGTTCCGCTGACGATCGCGTGCAACCAAGCAA AAGCCGTGTCGAGCGAGTGCGTGGCGTGCTTTGGGGATATCATGGTGTAT ATGGGCGACAAGAAAGCCAAGGAATCCGGAATGCAGCTCATCAAGAGCCT CCACACGAGGTTGTTGGCTTCCACGCAAGAGTTCAGAGATGAAATTATCT GCCAGGTACCATCTTCTGAAGCGCAGCGGGCGGAAGGGGGCGCGTAGCAT AGGCACGACGCGGTTATCGGTAGCTACATACCATAGTTGATAATGGTAAG ACCCGCGATTTTAACGTCTGTGCGGTGCCACAACACGGTGCGGGTCGGTG TTATGCCCGCCTGGCACGATTCAATAACGGATATGCGTGGGGAGAATATA GTTTTTTTTTCGGATGCTATTTCTACTTGTGAAAACGACATCGCTCTTTT AGCTGGGTTCGTGAGCAGAGGAATTGCCCAAGGGGGAAGTCAAAGGAGAA ACTCTTGGTTGGTCCATTTCATCGGCCGTCCACATGTACCAACTGCTGCC TCGGAGTTGAGGATATGCCCTTGTTGGTTCCCGAACACGTTTCATTGTCT TGAAACTCGATCTACTCGAAAGCAAACATGAGTACCGCTGACAAATAATC AGACACCGGGACGAGATATCCGCGACGCAACTGCAACCAAAAGGATGTCG GATCGTAGAAATACCTTCTTGACCCTATCTCAGGCTTTCAAAATCTCGTC CGAACTAGGGAGTGCATTCATGATAGGCGAATAACTCCCACTCTCGACAC CGATCAAAACTGCTGTCCTGTCCACAATTTCTGCTCCCTCCTGTTTTGAT TGATCAGGTATGCAAGCAGACAACCTCAAATCCAGACGCCAATAGCGACC TGCGCGGTTGGCAGTTGATACTGTCGATCCTGGCCGTGGCGACGCCAAGC AAAGGGCTGATTCCTTGCTTCAGAAAGCATTGTGAGCTGGGACCTGTGGG CTCGATTCCTCAGACGTATGCGCAATACGCTCTGTCGGCCCTGCACAAAG TGAGTGAAACAGAAGGCCGTAATTAGCCTGCCATCAATAGAATGGGCAAC GTTTAATTGTGCGCAGTGTCTAGGGCTGAAATAGGCAAGTTCTCTGGCAG CCGACCTTCTATTTTCCCATGCACTAGTGCATAGCGTGTCTTCTGCTACA TATGTACGTAAGGTAATGAGTAGCCACGGTCTCTGCAGAACGTCACTCTT CAACGCGACTCTCCAAAACCCGGGCGTTGCCCTGGACCCCTCAAGAATCC CGAACATGAAGGCCCCAACGATTTTCTGGTGGGGTTTCCCCTTTTTCCTG ATAAGATTGTTTTTCCCGTGTCCTGGCTATTGGGGTTTGAAAGGGAACGC GTACTACTGTAGCTGCAGAATGACAAACAAGCCTGAGTTCGCATTTTCAA ACCGAGGCGCGCTCTTTCTTGTGGTCGGCTCCTGATCTCCCCCCCCCGGA CCCCGCTGCTCTGATCTATGAAGGAGAGTTCTTTGGCACCTCGAAAGGCA GCGCCCTGCGACGTCGAAATCATGGCTCTCGTGCAGCTGTCGGCTGTTCC CGTTCTAGTTCGTCTCCAAGACGGGAACAAGGTGGAAGTCATGGCGGACT CGTGGACTTCCGTAACAGACCTGGAGAAACAGGTAGGTATTGGCGTGGCC CTTAACCCCTTTGGCCTTTGGGTCTAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11515:1374..3600+

>mRNA_Ecto-sp9_F_contig11515.1293.1 ID=mRNA_Ecto-sp9_F_contig11515.1293.1|Name=mRNA_Ecto-sp9_F_contig11515.1293.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2202bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11515:1374..3600+ (Ectocarpus species9 EcSCA_722f female)
ATGGAGGGCCTTCCACAGAACTACCGAGACAATATCACGATCGACAACGG
GGTCGAAATTGTCTGGGTGAACCAAAAAGGACAGGTCATCCCGAAAGACA
AGGCCGGCGCAGCGTCTTCCGCAGTGGAAGATGATGCGGACGTTGTTGTC
GGCATGCCTCGCGTTGCGAGCATCAGGAAATCGGCGGTAGAGACGGAATT
GAACAACAGCAGCCTCCCAGCCAGCCCTGGGGGTACGCGCCGCACGTCGG
TCGCTGGCACCGTGTCGCCCTCCCCCCAGCTGATCGGAGCGTGGTTTACT
AACGGGACGGACACCGCAGGCGAGGGGGCGCCAACTTCTCCCGCGGGCTC
CACCGGACCACCGGACACCGAGGACGATGACGCCGACCCCGAAGGCCATC
CCTGTATGGCCCTCGAGCCGTATGCCCGCGAAATGTACAACACCGTTCGG
AAGGGGCTACTTGGGAAGAAAAGGACCCCAATGGAGACGCTGCTGAGCTG
GAAGGGAAAGCAGATCACGGTTCCGCTGACGATCGCGTGCAACCAAGCAA
AAGCCGTGTCGAGCGAGTGCGTGGCGTGCTTTGGGGATATCATGGTGTAT
ATGGGCGACAAGAAAGCCAAGGAATCCGGAATGCAGCTCATCAAGAGCCT
CCACACGAGGTTGTTGGCTTCCACGCAAGAGTTCAGAGATGAAATTATCT
GCCAGATGGAGGGCCTTCCACAGAACTACCGAGACAATATCACGATCGAC
AACGGGGTCGAAATTGTCTGGGTGAACCAAAAAGGACAGGTCATCCCGAA
AGACAAGGCCGGCGCAGCGTCTTCCGCAGTGGAAGATGATGCGGACGTTG
TTGTCGGCATGCCTCGCGTTGCGAGCATCAGGAAATCGGCGGTAGAGACG
GAATTGAACAACAGCAGCCTCCCAGCCAGCCCTGGGGGTACGCGCCGCAC
GTCGGTCGCTGGCACCGTGTCGCCCTCCCCCCAGCTGATCGGAGCGTGGT
TTACTAACGGGACGGACACCGCAGGCGAGGGGGCGCCAACTTCTCCCGCG
GGCTCCACCGGACCACCGGACACCGAGGACGATGACGCCGACCCCGAAGG
CCATCCCTGTATGGCCCTCGAGCCGTATGCCCGCGAAATGTACAACACCG
TTCGGAAGGGGCTACTTGGGAAGAAAAGGACCCCAATGGAGACGCTGCTG
AGCTGGAAGGGAAAGCAGATCACGGTTCCGCTGACGATCGCGTGCAACCA
AGCAAAAGCCGTGTCGAGCGAGTGCGTGGCGTGCTTTGGGGATATCATGG
TGTATATGGGCGACAAGAAAGCCAAGGAATCCGGAATGCAGCTCATCAAG
AGCCTCCACACGAGGTTGTTGGCTTCCACGCAAGAGTTCAGAGATGAAAT
TATCTGCCAGGTATGCAAGCAGACAACCTCAAATCCAGACGCCAATAGCG
ACCTGCGCGGTTGGCAGTTGATACTGTCGATCCTGGCCGTGGCGACGCCA
AGCAAAGGGCTGATTCCTTGCTTCAGAAAGCATTGTGAGCTGGGACCTGT
GGGCTCGATTCCTCAGACGTATGCGCAATACGCTCTGTCGGCCCTGCACA
AAGTATGCAAGCAGACAACCTCAAATCCAGACGCCAATAGCGACCTGCGC
GGTTGGCAGTTGATACTGTCGATCCTGGCCGTGGCGACGCCAAGCAAAGG
GCTGATTCCTTGCTTCAGAAAGCATTGTGAGCTGGGACCTGTGGGCTCGA
TTCCTCAGACGTATGCGCAATACGCTCTGTCGGCCCTGCACAAAGAGAGT
TCTTTGGCACCTCGAAAGGCAGCGCCCTGCGACGTCGAAATCATGGCTCT
CGTGCAGCTGTCGGCTGTTCCCGTTCTAGTTCGTCTCCAAGACGGGAACA
AGGTGGAAGTCATGGCGGACTCGTGGACTTCCGTAACAGACCTGGAGAAA
CAGGTAGGTATTGGCGTGGCCCTTAACCCCTTTGGCCTTTGGGTCTAGGA
GAGTTCTTTGGCACCTCGAAAGGCAGCGCCCTGCGACGTCGAAATCATGG
CTCTCGTGCAGCTGTCGGCTGTTCCCGTTCTAGTTCGTCTCCAAGACGGG
AACAAGGTGGAAGTCATGGCGGACTCGTGGACTTCCGTAACAGACCTGGA
GAAACAGGTAGGTATTGGCGTGGCCCTTAACCCCTTTGGCCTTTGGGTCT
AG
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