mRNA_Ecto-sp9_F_contig11515.1293.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: MyTH4 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTX8_ECTSI) HSP 1 Score: 593 bits (1530), Expect = 5.290e-213 Identity = 298/299 (99.67%), Postives = 298/299 (99.67%), Query Frame = 1
Query: 1 MEGLPQNYRDNITIDNGVEIVWVNQKGQVIPKDKAGAASSAVEDDADVVVGMPRVASIRKSAVETELNNSSLPASPGGTRRTSVAGTVSPSPQLIGAWFTNGTDTAGEGAPTSPAGSTGPPDTEDDDADPEGHPCMALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQTYAQYALSALHK 897
MEGLPQNYRDNITIDNGVEIVWVNQKGQVIPKDKAGAASSAVEDDADVVVGMPRVASIRKSAVETELNNSSLPASPGGTRRTSVAGTVSPSPQLIGAWFTNGTDT GEGAPTSPAGSTGPPDTEDDDADPEGHPCMALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQTYAQYALSALHK
Sbjct: 1 MEGLPQNYRDNITIDNGVEIVWVNQKGQVIPKDKAGAASSAVEDDADVVVGMPRVASIRKSAVETELNNSSLPASPGGTRRTSVAGTVSPSPQLIGAWFTNGTDTGGEGAPTSPAGSTGPPDTEDDDADPEGHPCMALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQTYAQYALSALHK 299
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: KIN14E (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RIC2_SYMMI) HSP 1 Score: 123 bits (309), Expect = 1.590e-27 Identity = 76/235 (32.34%), Postives = 120/235 (51.06%), Query Frame = 1
Query: 406 MALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQT--YAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQVGIGVALN---PFGLW 1095
M +E Y + +N RKG+ K RT ++ LLSWK + I L + + +++E V F ++ YMGD+ + + G + ++ + +E RDE+ CQ+ KQTTSNPD S +GWQL++ LAV PS L+P +C +P +A+ L + K S L PR+ P +E+ AL + V + D + ADSWT+ + E + V + PF L+
Sbjct: 51 MNMEQYGEKFFNFDRKGMF-KGRTTIDKLLSWKSELIKTSLR---SLSGDMATEAVQQFRNVTGYMGDRSSTKGGGDHAMKILNHMMLAPEELRDELYCQIVKQTTSNPDPFSTEKGWQLLMICLAVFPPSSDLMPHLMGYCAANLQSEVPNVAGFAEICLHRIPKISHLGPRRELPTKIELEALRRGGTVNLRFFFLDDKYCTLRADSWTTARETEDTIAKLVNITNDKPFSLF 281
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Unconventional (myosin-VIIa n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G8S4_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.960e-27 Identity = 79/237 (33.33%), Postives = 126/237 (53.16%), Query Frame = 1
Query: 406 MALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPS----KGLIPCFRKHCELGPVGSIPQTYAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQVGIGVALN---PFGLW 1095
+ + YA + + RKG KK + LL+WKG++I L + A + + V F +I+ YMGDK +++ +K + + + +E DE+ CQ+ KQT +NPDA S LRGW+L+ + PS K L+ R+ E P + + A+YAL + K L R AP +EI A+ ++S V + V L DG +++ A+SWTSV D+ + VG + + PF L+
Sbjct: 305 LNMNNYAEQYFKLTRKGFATKKTVHVADLLTWKGEKIKSSLHPLSDPA--LVHDAVLAFSNILCYMGDKPSRDPMDNALK-IFKITVGAPEELLDEVYCQLYKQTNANPDATSCLRGWELMAMCAGLFPPSSKLEKYLLSYIRQTTESQPYPGVGKL-AEYALLRIVKSLDLGARSEAPTKIEIAAVREISPVKIRVTLLDGRILDMEAESWTSVADMNQAVGNQLKIEDATPFSLF 537
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F2Z0_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.140e-26 Identity = 73/231 (31.60%), Postives = 115/231 (49.78%), Query Frame = 1
Query: 421 YAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQTYAQYALSALH---KESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQVGIGVALN---PFGLW 1095
YA + +N RKG+ G K T E + SWKG + + ++ K + E V CF ++ +MGD+ + ++ M L +L S ++ R+EI CQ+CKQT +NP S L GWQL++ LA P K L +C P QYA ALH + + L PR+ P VE+ A +L V V DG + + +SWT+ ++ + + + + PF ++
Sbjct: 247 YAEKNFNYDRKGIFGMKTTT-EKITSWKGGRDLIKTSLITLNDKNLQGEAVQCFRNVTGFMGDRNSNKTNMDHAYKLLNCMLVSIEDLRNEIYCQICKQTKANPSMESTLAGWQLMILCLAAFPPGKLLKDYLMAYCAENIREESPPQVRQYAEFALHCVPRITELGPRRELPTIVEMEACKRLQPATVRVNFLDGRYIMMPVNSWTTAELFKEMICLRLGIRTMKPFAIF 476
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: KIN14E (protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812W082_9DINO) HSP 1 Score: 119 bits (299), Expect = 5.090e-26 Identity = 76/221 (34.39%), Postives = 110/221 (49.77%), Query Frame = 1
Query: 421 YAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKA-KESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHCELGPVGSIPQTYAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQVGIGVALN 1080
Y +N RKG+ G T + +L+WK I L K + S CF +I YMGD+ + K+ G K + T L+S++E RDE+ CQ+ KQT NPD +S +GWQLI +PS L+P F +C+ T AQ A+ AL K S L PR+ P +E+ A+ L+ V + V DG + SWT+ DL + + + L
Sbjct: 367 YGEAYFNRNRKGIFGSATT-VSKMLAWKNSNIRTALKKM--PTKDMESAATQCFRNITGYMGDRSSRKDDGGHAEKVIKT-CLSSSEEIRDEVYCQLAKQTNQNPDQDSRRKGWQLICICAGCFSPSTTLLPHFVHYCKTAYDDPTCGTLAQRAVRALLKSSKLGPRRETPLPMELNAMASLNPVLMRVYHMDGTYEVLPVCSWTTAGDLNRMMAFQLKLT 583
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Plekhh1 (protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812XQK1_9DINO) HSP 1 Score: 115 bits (287), Expect = 2.360e-24 Identity = 80/235 (34.04%), Postives = 115/235 (48.94%), Query Frame = 1
Query: 397 HPCMALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKG----LIPCFRKHCEL-GPVGSIPQTYAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRL-QDGNKVEVM-ADSWTSVTDLEKQVGIGVALN 1080
HP E YA + +N RKG+ GKK T ++ + +WK I L K + ++ CF +I YMGD+K ++ + L L + QE RDE+ CQ+ KQT NP+A S LRGWQL PS L F +H + G +G YA+Y L + K + L PR+ P +EI A + P +VR+ Q + EVM SWT+ DL K + + +
Sbjct: 207 HPTKNFEEYAADYFNLNRKGIFGKKTT-VDKITAWKADVIKTSLRKM--PGKDLETQATQCFRNITGYMGDRKTQKEDGGHAEKLMKNSLHAPQELRDEVYCQIMKQTNKNPNAESCLRGWQLFAVATGAFPPSAEFHDYLTSYFAEHMDDDGMIGR----YARYCLGRVMKSTQLGPRREIPTSMEIDACKSMK--PSVVRVFQLTGEYEVMPVTSWTTAEDLNKMMAFQLGIE 432
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WK49_9STRA) HSP 1 Score: 114 bits (284), Expect = 4.740e-24 Identity = 70/222 (31.53%), Postives = 117/222 (52.70%), Query Frame = 1
Query: 406 MALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPS----KGLIPCFRKHCELGPVGSIPQTYAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQV 1059
+ +E Y +E +N RKG GKK T ++ +LSWK +I L + A + + + F +I+ YMGDK +K + + + S ++ RDE+ CQ+ KQTT+NPDA S LRGW+L+ + PS K L+ R+ E P + + A + L PRK P D+EI ++ ++ + + + + DG + + A+SWT++ +L Q+
Sbjct: 280 LKMENYVQEYFNLNRKGW-GKKATTVQKILSWKTDRIRTSLHPLSDPA--LVHDAILAFQNILCYMGDKPSKNP-ISNANRIFRITVQSPEDLRDEVYCQLVKQTTNNPDATSTLRGWELLAMCAGLFPPSSKLEKYLLSYMRRTTENQPYPGVGKL-AXXXXXXXXXXTELGPRKEVPTDMEIESVRSITPLTIRIHMLDGAIIPMEAESWTTIKELNDQM 496
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A7X3_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.170e-22 Identity = 73/234 (31.20%), Postives = 115/234 (49.15%), Query Frame = 1
Query: 385 DPEGHPCMALEPYAREMYNTVRKGLLGKKRTPMETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPC----FRKHC----ELGPVGSIPQTYAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQVG 1062
D EGH +A+ + RKGL K RT ++ + WK + + L +C + + +E + ++ YMGD+ + ++ L +LL QE RDE+ CQ+ KQTT NP + S +RGW+L+LS+L+ PS+ L P F +H E +YA+ L AL + L R+ P +E A + +PV L DG + + D+WT+ DL +G
Sbjct: 297 DYEGHDFPT---FAKAHFQMHRKGLF-KARTELDKICRWKRATMKLALLESCCRDADLLAEALQAHRNVTGYMGDRSSSKNKDGHRTKLIGQLLRCKQELRDEVYCQLVKQTTLNPSSESAIRGWELLLSVLSTCPPSEQLAPHVGWHFGEHLSSTQESADYTQSVASYAEKCLVALPQVMKLGCRREKPTLLEAQATSKGEGIPVRAYLVDGRHLTIKIDAWTTALDLADALG 526
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDD6_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.340e-20 Identity = 70/213 (32.86%), Postives = 103/213 (48.36%), Query Frame = 1
Query: 481 METLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRKHC--ELGPVGSIPQT--YAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLE----KQVGIGVALNPFGLW 1095
ME +LS K I L C ++ E V F +I YMGD+ + + L +L + ++ RDE+ CQ+ KQTT NP +S+++GW+L+ + P + L P HC E G S P+ YA Y L + K L PR+ P VEI A +L + V V D + + DSW++ +LE K +GI PF L+
Sbjct: 1 MEKILSHKNDTIRTSL---CQLNGDLAQEAVQSFRNITGYMGDRSTTKGAVDHSLKLLNNMLLAPEDLRDEVYCQIIKQTTKNPSVDSNIKGWELLAILAGSFPPGEELKPYVMHHCAAEHGRRHSNPKVRDYAVYVLHRIKKVCRLGPRREIPTPVEIEATRRLLPLNVRVSFLDDRYITLPVDSWSTAKELEGRCAKMLGIKDG-TPFALY 209
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Match: Uncharacterized (protein AlNc14C241G9461 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WSX2_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 3.140e-18 Identity = 61/201 (30.35%), Postives = 98/201 (48.76%), Query Frame = 1
Query: 469 KRTPM--ETLLSWKGKQITVPLTIACNQAKAVSSECVACFGDIMVYMGDKKAKESGMQLIKSLHTRLLASTQEFRDEIICQVCKQTTSNPDANSDLRGWQLILSILAVATPSKGLIPCFRK--HCELGPVGSIPQTYAQYALSALHKESSLAPRKAAPCDVEIMALVQLSAVPVLVRLQDGNKVEVMADSWTSVTDLEKQV 1059
+R P+ E L W+ + + PL + ++ + F +I +MG++ + + L ++ + +DEI CQ+CKQ NP+ + L GW L+ +A TPS L P + + +G A AL+ALH S A RK P +EI +L QLS++ +LV L DG V++ SWT+ +L V
Sbjct: 75 RRAPLRLEKRLCWEKETLQTPLLPLSKEHTRIALQA---FRNISGFMGNRTSGKDKFDHSDKLLRNIMPRSDNVKDEIFCQICKQINGNPNQEAKLSGWLLLHICIATFTPSASLYPFLERLLYSNIGSKHVEVSQRATAALNALHNSSGKADRKELPTRLEIESLQQLSSMEILVSLIDGTTVQMAIYSWTTCAELNSMV 272 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11515.1293.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig11515.1293.1 >prot_Ecto-sp9_F_contig11515.1293.1 ID=prot_Ecto-sp9_F_contig11515.1293.1|Name=mRNA_Ecto-sp9_F_contig11515.1293.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=367bp MEGLPQNYRDNITIDNGVEIVWVNQKGQVIPKDKAGAASSAVEDDADVVVback to top mRNA from alignment at Ecto-sp9_F_contig11515:1374..3600+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig11515.1293.1 ID=mRNA_Ecto-sp9_F_contig11515.1293.1|Name=mRNA_Ecto-sp9_F_contig11515.1293.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2227bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11515:1374..3600+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11515:1374..3600+ >mRNA_Ecto-sp9_F_contig11515.1293.1 ID=mRNA_Ecto-sp9_F_contig11515.1293.1|Name=mRNA_Ecto-sp9_F_contig11515.1293.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2202bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11515:1374..3600+ (Ectocarpus species9 EcSCA_722f female)back to top |