mRNA_Ecto-sp9_F_contig11482.1263.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig11482.1263.1
Unique NamemRNA_Ecto-sp9_F_contig11482.1263.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11482.1263.1 vs.
Match: GT47 (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRU9_9PHAE)

HSP 1 Score: 353 bits (907), Expect = 2.910e-108
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 3 
Query:    3 GNLYLSGVGYDERMSVVPLHSDPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVAPAELLEMQRKSVQAFYEIFGEEPGYDRIARVVVDELVLRVGYHR 533
            GNLYLSGVGYDERMSVVPLHS+PEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSV PAELL MQRKSVQAFYEIFGEEPGYDRIARVVVDELVLRVGYHR
Sbjct:  360 GNLYLSGVGYDERMSVVPLHSEPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVTPAELLGMQRKSVQAFYEIFGEEPGYDRIARVVVDELVLRVGYHR 536
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11482.1263.1 vs.
Match: Glycosyltransferase, (family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H3_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 8.690e-56
Identity = 102/176 (57.95%), Postives = 132/176 (75.00%), Query Frame = 3 
Query:    3 GNLYLSGVGYDERMSVVPLHSDPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVAPAELLEMQRKSVQAFYEIFG-EEPGYDRIARVVVDELVLRVGY 527
            G LYLSG G  ERMS+VPL  +  GVIM L+CFE+HDEHLLPEN E+C AL++    H YE LMN+TFGLVPAGR P TYRL EVMSAG+IPVFV  D+V PF E +DW + SF+F P++VGP M+ TLR+V  AEL +MQRKS++A  +IFG ++  +   AR++++ L  R+G+
Sbjct:   47 GTLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEIHDEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHGKIFGVDQDIFVPSARIMLEILQRRLGH 222
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11482.1263.1 vs.
Match: Glycosyltransferase, (family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H7_ECTSI)

HSP 1 Score: 196 bits (497), Expect = 2.440e-53
Identity = 97/176 (55.11%), Postives = 131/176 (74.43%), Query Frame = 3 
Query:    9 LYLSGVGYDERMSVVPLHSDPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVAPAELLEMQRKSVQAFYEIFGEEPGYDR-IARVVVDELVLRVGYHR 533
            LY+SG G +ER+S++PL  +  GV++ ++CFE H EHLLPEN EFC AL +    ++Y  LMN+TFGLVPAGR PATYRL EVMSAG+IPVFV RD+V PF E++DWP++SF+F P+EV   MM TL +V PA+L EMQRKS++A+  +FG +    R  AR+++  L  R+G+ R
Sbjct:   66 LYISGHGSEERISLLPLQDEENGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGSIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMSTLLAVPPAQLEEMQRKSLEAYGRMFGADVNDFRPSARIILGILRRRLGHRR 241
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11482.1263.1 vs.
Match: Glycosyltransferase, (family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H1_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 5.340e-53
Identity = 101/176 (57.39%), Postives = 131/176 (74.43%), Query Frame = 3 
Query:    3 GNLYLSGVGYDERMSVVPLHSDPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVAPAELLEMQRKSVQAFYEIFGEEPG-YDRIARVVVDELVLRVGY 527
            G+LYLS  G  ERMS+VPL  +  GVIM L+CFELH+EHLLPEN E+C AL++    H YE LMN+TFGLVPAGR P T+RL EVMSAG+IPVFV  D+V PF E +DW + SF+F P++VGP M+ TLR+V  AEL +MQRKS++A  +IFG + G +   AR+++  L  R+G+
Sbjct:  156 GSLYLSRHGSGERMSLVPLQDEANGVIMSLHCFELHNEHLLPENVEYCRALSDRYGDHSYESLMNSTFGLVPAGRSPGTFRLGEVMSAGSIPVFVGWDLVLPFKELIDWSSFSFAFAPDQVGPQMVRTLRAVPRAELEQMQRKSLKAHRKIFGVDKGIFVPSARIMLKILQRRLGH 331
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11482.1263.1 vs.
Match: GT47 (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ8_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 4.190e-51
Identity = 100/176 (56.82%), Postives = 129/176 (73.30%), Query Frame = 3 
Query:    3 GNLYLSGVGYDERMSVVPLHSDPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVAPAELLEMQRKSVQAFYEIFGEEPG-YDRIARVVVDELVLRVGY 527
            G+LYLSG G  ERMS+VPL  +  GVIM L+CFE+H+EHLLPEN E+C AL++    H Y  LMNTTFGLVPAGR P TYRL EVMSAG+IPVFV  D+V PF E +DW + SF+F P++V   M+ TLR+V  AEL +MQRKS++A+  IFG   G + + AR+V++ L  R+ +
Sbjct:  252 GSLYLSGHGSGERMSLVPLQDEANGVIMSLHCFEVHEEHLLPENVEYCRALSDQYDDHSYTSLMNTTFGLVPAGRSPGTYRLGEVMSAGSIPVFVGWDLVPPFEELIDWSSFSFAFAPDQVESQMVRTLRAVPRAELEQMQRKSLEAYRRIFGVNMGDFVQGARIVLETLQRRLEH 427
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11482.1263.1 vs.
Match: GT47 (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9T2_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 5.290e-51
Identity = 93/176 (52.84%), Postives = 125/176 (71.02%), Query Frame = 3 
Query:    3 GNLYLSGVGYDERMSVVPLHSDPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVAPAELLEMQRKSVQAFYEIFGEEPGYDRIARVVVDELVLRVGYH 530
            G LYL G G +ER +V  +H    GV+  + C  +H +  LPEN+++C    +    ++YE LMNTTF LVPAGR P ++RL EVMSAGAIPVFV RD ++PF E++DWP+ SF F P++VGP MM+TLR+V PA+LLEMQRKS++A+++IFG    Y  IA   +D LV R+GYH
Sbjct:  352 GTLYLRGYGLEERSAVSRVHDPANGVVSVIKCSNMHGDESLPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVQPAQLLEMQRKSLRAYWKIFGGVTNYSVIASNAIDMLVQRIGYH 527
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11482.1263.1 vs.
Match: GT47 (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKV6_9PHAE)

HSP 1 Score: 187 bits (476), Expect = 2.750e-48
Identity = 94/176 (53.41%), Postives = 129/176 (73.30%), Query Frame = 3 
Query:    9 LYLSGVGYDERMSVVPLHSDPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVAPAELLEMQRKSVQAFYEIFGEEPGYDR-IARVVVDELVLRVGYHR 533
            LY+SG G +ER+S++PL  +  GV++ ++CFE H EHLLPEN EFC AL +    ++Y  LMN+TFGLVPAGR PATYRL EVMSAG IPVFV RD+V PF E++DWP++SF+F P+EV   MM TL +V  A+L EMQRKS++A+ ++FG +    R  A++++  +  R+G  R
Sbjct:  251 LYVSGHGSEERISLLPLQDEEHGVVVTMHCFEEHQEHLLPENAEFCQALKDQYEGYDYRSLMNSTFGLVPAGRGPATYRLGEVMSAGTIPVFVGRDLVPPFMEQIDWPSISFAFTPDEVESRMMKTLLAVPRAQLEEMQRKSLEAYGKMFGADVNDFRPSAKIILGIIRRRLGLWR 426
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11482.1263.1 vs.
Match: Glycosyltransferase, (family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY4_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 4.190e-42
Identity = 76/141 (53.90%), Postives = 100/141 (70.92%), Query Frame = 3 
Query:    3 GNLYLSGVGYDERMSVVPLHSDPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVAPAELLEMQ 425
            G LYL G G +ER +V   H    GV+  + C  +H + +LPEN+++C    +    ++YE LMNTTF LVPAGR P ++RL EVMSAGAIPVFV RD ++PF E++DWP+ SF F P++VGP MM+TLR+V PA LLEMQ
Sbjct:   47 GTLYLRGYGLEERSAVSRAHDPANGVVSVIKCSNMHGDDILPENQDYCQRSRKRYDLYDYEKLMNTTFALVPAGRSPGSFRLGEVMSAGAIPVFVVRDWIKPFQEQIDWPSFSFVFSPDDVGPIMMETLRAVEPARLLEMQ 187
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11482.1263.1 vs.
Match: Glycosyltransferase, (family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4H4_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 2.150e-32
Identity = 69/138 (50.00%), Postives = 89/138 (64.49%), Query Frame = 3 
Query:   12 YLSGVGYDERMSVVPLHSDPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVAPAELLEMQ 425
            YL   G +E M ++PL     GV + ++CFE H +HLLPEN EF  A  +     +Y  LMN+TFGLVPAG    TYRL EVMSAG+IPVFV RD+V  F E++DW ++SF+F P+EV    M TL +V   +L  MQ
Sbjct:   45 YLGEHGSEEWMGLIPLQDKENGVNLSMHCFENHQDHLLPENPEFRQAQTDHYQGQDYRSLMNSTFGLVPAGWSSGTYRLGEVMSAGSIPVFVGRDLVPSFMEQIDWNSISFAFTPDEVKSRTMSTLLAVPREQLERMQ 182
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11482.1263.1 vs.
Match: Glycosyltransferase, (family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT2_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 1.100e-29
Identity = 88/202 (43.56%), Postives = 111/202 (54.95%), Query Frame = 3 
Query:    3 GNLYLSGVGYDERMSVVPLHSD--------PEG------------------VIMGLNCFELHDEHLLPENEEFCLALN-ETASRHEYEDLMNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLSFSFPPEEVGPAMMDTLRSVAPAELLEMQRKSVQAFYEIFGEEPGYDRIARVVVDELVLRVGY 527
            G LYLSG G  ER +V+ L S          EG                  V++   C   H E LL  N+  C A   E  S   Y DLMNTTF L+PAGR PATYRLAE +SAGA+PVF+ +D V+PFP ++ W   SFSFPPEEV P M+ TLR+V   EL +MQ  +++ F   FG  PG D +   V+D L  R+ +
Sbjct:  387 GKLYLSGNGLLERSAVLDLMSGGASAAAAPAEGRGEMGRANGDSQSSSSPDVLVVERCCNFHSEQLLSWNKAMCEASQREYDSSPSYGDLMNTTFALLPAGRSPATYRLAEALSAGALPVFIHQDFVKPFPGKIPWSDFSFSFPPEEV-PRMLKTLRAVPDRELAQMQATALEVFDTYFG--PGMDNMLHTVLDILEDRLYF 585
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11482.1263.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
GT472.910e-10898.31protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
Glycosyltransferase,8.690e-5657.95family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
Glycosyltransferase,2.440e-5355.11family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
Glycosyltransferase,5.340e-5357.39family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
GT474.190e-5156.82protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
GT475.290e-5152.84protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
GT472.750e-4853.41protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Glycosyltransferase,4.190e-4253.90family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
Glycosyltransferase,2.150e-3250.00family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
Glycosyltransferase,1.100e-2943.56family GT47 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11482contigEcto-sp9_F_contig11482:69..3948 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score327.8
Seed ortholog evalue2.9e-87
Seed eggNOG ortholog2880.D7FYQ6
Preferred nameEXTL1
KEGG koko:K02366,ko:K02368,ko:K21988
KEGG TC1.A.17.4
KEGG ReactionR05935,R05936,R10138,R10139
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
GOsGO:0000003,GO:0000139,GO:0000271,GO:0000902,GO:0000904,GO:0001501,GO:0001503,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005975,GO:0005976,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006040,GO:0006044,GO:0006082,GO:0006790,GO:0006807,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007005,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007369,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007492,GO:0007498,GO:0008150,GO:0008152,GO:0008194,GO:0008354,GO:0008375,GO:0008589,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010646,GO:0010647,GO:0012505,GO:0015012,GO:0015014,GO:0015020,GO:0016020,GO:0016021,GO:0016043,GO:0016051,GO:0016192,GO:0016477,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019899,GO:0019953,GO:0021537,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030111,GO:0030154,GO:0030166,GO:0030176,GO:0030177,GO:0030182,GO:0030201,GO:0030202,GO:0030203,GO:0030210,GO:0030900,GO:0030968,GO:0031090,GO:0031175,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032989,GO:0032990,GO:0033554,GO:0033692,GO:0034620,GO:0034637,GO:0034645,GO:0034976,GO:0035295,GO:0035966,GO:0035967,GO:0036465,GO:0036498,GO:0040011,GO:0042175,GO:0042221,GO:0042328,GO:0042330,GO:0042802,GO:0042803,GO:0043009,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045880,GO:0046982,GO:0046983,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048513,GO:0048518,GO:0048522,GO:0048565,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048666,GO:0048667,GO:0048699,GO:0048706,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050508,GO:0050509,GO:0050789,GO:0050794,GO:0050808,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051674,GO:0051704,GO:0051716,GO:0055123,GO:0060322,GO:0060465,GO:0060828,GO:0061564,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071840,GO:0072498,GO:0090092,GO:0090097,GO:0090098,GO:0090100,GO:0090263,GO:0097485,GO:0098588,GO:0098657,GO:0098791,GO:0098827,GO:0099003,GO:0099504,GO:0120036,GO:0120039,GO:1901071,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
EggNOG free text desc.macromolecule glycosylation
EggNOG OGsKOG1021@1,KOG1021@2759
EC2.4.1.224,2.4.1.225
COG Functional cat.S
CAZyGT47,GT64
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko02000
Hectar predicted targeting categoryother localisation
Exons3
Model size2725
Cds size495
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11482.1263.1prot_Ecto-sp9_F_contig11482.1263.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig11482 110..1759 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928400.6500828-UTR-Ecto-sp9_F_contig11482:68..1091622928400.6500828-UTR-Ecto-sp9_F_contig11482:68..109Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11482 69..109 +
1692277858.9629138-UTR-Ecto-sp9_F_contig11482:68..1091692277858.9629138-UTR-Ecto-sp9_F_contig11482:68..109Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11482 69..109 +
1622928400.6979787-UTR-Ecto-sp9_F_contig11482:1759..39481622928400.6979787-UTR-Ecto-sp9_F_contig11482:1759..3948Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11482 1760..3948 +
1692277859.0037599-UTR-Ecto-sp9_F_contig11482:1759..39481692277859.0037599-UTR-Ecto-sp9_F_contig11482:1759..3948Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11482 1760..3948 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928400.6619265-CDS-Ecto-sp9_F_contig11482:109..2611622928400.6619265-CDS-Ecto-sp9_F_contig11482:109..261Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11482 110..261 +
1692277858.9748957-CDS-Ecto-sp9_F_contig11482:109..2611692277858.9748957-CDS-Ecto-sp9_F_contig11482:109..261Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11482 110..261 +
1622928400.6747057-CDS-Ecto-sp9_F_contig11482:606..8381622928400.6747057-CDS-Ecto-sp9_F_contig11482:606..838Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11482 607..838 +
1692277858.9854224-CDS-Ecto-sp9_F_contig11482:606..8381692277858.9854224-CDS-Ecto-sp9_F_contig11482:606..838Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11482 607..838 +
1622928400.6849642-CDS-Ecto-sp9_F_contig11482:1648..17591622928400.6849642-CDS-Ecto-sp9_F_contig11482:1648..1759Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11482 1649..1759 +
1692277858.9957883-CDS-Ecto-sp9_F_contig11482:1648..17591692277858.9957883-CDS-Ecto-sp9_F_contig11482:1648..1759Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11482 1649..1759 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig11482.1263.1

>prot_Ecto-sp9_F_contig11482.1263.1 ID=prot_Ecto-sp9_F_contig11482.1263.1|Name=mRNA_Ecto-sp9_F_contig11482.1263.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=165bp
MSVVPLHSDPEGVIMGLNCFELHDEHLLPENEEFCLALNETASRHEYEDL
MNTTFGLVPAGRQPATYRLAEVMSAGAIPVFVSRDMVRPFPERVDWPTLS
FSFPPEEVGPAMMDTLRSVAPAELLEMQRKSVQAFYEIFGEEPGYDRIAR
VVVDELVLRVGYHR*
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mRNA from alignment at Ecto-sp9_F_contig11482:69..3948+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig11482.1263.1 ID=mRNA_Ecto-sp9_F_contig11482.1263.1|Name=mRNA_Ecto-sp9_F_contig11482.1263.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3880bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11482:69..3948+ (Ectocarpus species9 EcSCA_722f female)
AGGGCAACCTTTACCTGTCGGGCGTCGGGTACGACGAACGGATGAGTGTC
GTCCCGCTCCACTCCGACCCGGAGGGGGTGATCATGGGGCTCAACTGCTT
CGAGCTGCACGATGAGCACCTCCTGCCGGAGAACGAGGAGTTCTGCCTGG
CCCTCAACGAGACGGCGTCGCGGCACGAGTACGAGGACCTCATGTACGTT
GTTGTCGTTTTTTTTTCCTTCTTTTTTCTGTCGGTCGAGAAATCGCGCTG
CCTCTCCGCCGTGACAAACCTCATGTACATTTTTTGTTTTTTCCCTCTTT
TTTCTGTCGGTCGAGATATCGCGCCGCCTTTCCGCCTTGACAAACTTTTT
CTTCCCCCGACCGCGTTGTGCCTCAAGAACCGTCTTTCGTTTATGATTCG
CGCACGATGTCTTTATGCGTGTGTCTTGTGCCCTTCCCAGGAAGACCACG
TTGAACTCCGACCCCCCTCCCCCCAACAAAGAACGCCGTTCGTTTTTTTA
ATACGCGCACGATGTCTTGTGTCCCCCCCCTCCCGCAGGAACACGACGTT
CGGCCTTGTGCCCGCAGGCCGCCAGCCCGCGACGTACCGCCTCGCCGAGG
TGATGAGCGCCGGCGCCATCCCCGTGTTCGTGTCGAGGGACATGGTGAGG
CCCTTCCCGGAGAGGGTGGACTGGCCGACGCTTTCGTTCTCCTTCCCGCC
GGAGGAGGTGGGGCCGGCCATGATGGACACGCTCAGGTCGGTCGCCCCGG
CGGAGCTGTTGGAAATGCAGGTGAGCTCGGGGAGGCGGGGGGGGGGTACT
CGTAGCCGTGCATGCCGTGGTTTGGTGACCTCGCATCCCTACAAAGCCGG
GACGGAGCACGCCGGATTTTCACCGGACCAGGCTAGCACATCACCAAGCG
CGAGGAAGGGGGGGGGGGGCAAGGGTTTCTCCCAGGGGAGGAAGGAGGGG
GAGGAAGAGCTTGGGAAGTGGGGATTGTTTTAATTCCAGGGGGAGGGAGG
GGTGGGGAAATATGCACTGAAAACGGACACGCGTGAGACAGTTGAATGTT
CCTCGCAATCCTTGAGGCGTGGGGATTGCTACCGACGATGGCGGTCTGCC
ACCCAAGGTCATCCTTCGCCACACTTGTGTAGGCGTCCCGTGGCGAATTT
GATTTCCACCCCAACGCAAATTTTCTGAGTGTTGGGTCATTTGAGAGCGT
ACACGATCGGGCTCTCGGGGCAAAAAATAAGTAGTTCGCTTTCGTTTGGC
ATACGCATATATACTGCTCCTGGTAGTGCTTCCGGTGGAGGATGGTCGTT
GCAACTATCCGCATCTCGCCAGACATCGTTCGTATCCCTCCGCTCACCGC
TCGTGTGGTAAAGAGGGGGTCGAAATGACAAACAATTTAATGGCTAAAGC
GAGCGCCAGCTCGATAACAGGGGATCGACATGGGAAATTTTTCAGTGGCT
AACACTGCTCAGCTCGATAACATGGGGTTGACATGGCAAATGGTTGAATG
GCTAAAAGCGTGCTCAGTTCGATGACAACCCCCCCCCACCCCCGGCCGAT
GCTGCCCCGCGCGCGCGTCTCTCGAATCAGCGAAAGTCGGTGCAGGCGTT
TTATGAGATTTTTGGGGAGGAGCCCGGGTACGACCGAATCGCTCGCGTCG
TGGTCGACGAGCTGGTGCTCCGCGTCGGGTATCACCGATGACACCTTGTA
CCTTATGTACGTAAAACGCGAGGGCTTGTAGTAGTAGCTTACAACGAGAG
GGAAGGTGCGGCAGAATGAAGAATGTGGGAAGTGTGGATGCGGCAAGACC
AACCTGGATAGCATAAGCGTCTTGGGCTGTTATCACGAGAGGGAAGGTGC
GGCAGAATGCGGTATATGTGAGATCAACCCGGAAAGCATAAGCTTCTAGG
CTGTTCGCCCCTGCCCGCTCGCCAGTCCTTTCGTTACGTACGCTAGAGCA
AGGATGGTTGGGAATTGAAAGAGGAGGGGAATTCCCCGCCCGCCTCGGCG
CCGGAGCGTCGTCTCTCGCCGGGGCACGCGGCGGCTGTCGGGAACGCGAT
CTTAGCTGTAAACAATCGGTGCACGTTGCCGTGGTCTCTTTATGTTTTCG
GCTGGGACTTTTGGTTTGTGACAAGAGAGCAGCGAGAGAGGTTCGCTGGC
CGTTCGTTTGTGTTCTTTGGAGGAAGGGGCAAAGTGCACACCAGATGGGA
TCTGTTTTGTCTCGGTGCCCTTGGACTCTGCCGCAGTCCGACCTGGGATT
GACCGATAGGACATCCCAACAGGGCTAATATAGCAGCCACACCCCGCGCT
TTTGCTGCGGGACAACCCCCCCCCCCCGGATATGATAATCCTGAACCCCT
TGATTGTTTCTGTGACTCGTTGTAAATTTATCCTGTGGATTTCGTCACCA
TGGTTGGGGTGACGATGAGAGATGCGTGAATATATCGTACACATTGGTCG
CTGTCCGTTGTCGTTTTAGTTCCGAGCGTGGGGAGAGTAGTTGCCCTCGT
AAGGTCTCGTTGTACTAGTACGATGCACGTATTCACCTTGGGGGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGACAGTAACAGCGCGGTAAGGGTGTGGTT
GCACAAGAGCAGCAGGACAGGAAGGGGTCTTACTGCCGCAACGTGAGGTA
GGAGTGAAACTGCTTATTATGGGTACATAGTGCTCTGCCTTGGCCTTAAT
CGATGGCGGGTACGATAGGGCGTTCTAGTTCACACGGTATGTTAGGATAT
AGCAGGAAAGAGCTTAGTATTTTTTCCAGCGCTTTTGTGTGGGCTTCGTG
TTTTGGATATGGACAGCGTTTTTGTGTTGCAGGGATAGCGGTTTTGGTGT
TTACGTGGTCTGGAAGGCGGTTTTCGGGAACTTTTCCAGCAGGGTCAGTT
AGTCTCGGAGAGAGAGGGAGAGGGTGCGTGAAGTTGTGTTGGCCGGCGTA
CGGGTGCTTTCTTTCGCCCGGTACCTACCTGCGCGTGTGCGTGGCATGGC
GAGCTGCTGCTGCTGTGTTGATGCCTTGCCTTGCCTTGCCTGTGGTGTGG
TTTTAGAGTCAAACCTTGGCAATCGACGAAGATGATGGCTGGCGGCACAT
GTGTAGCGTTAACGTCGTCCGGAAACCCCATATTTGCGTTAATTTATGTC
TACTCTACATCTCCACCAAATTTACCCATCCCTGTGTTTTGTCTGCTAGT
TAGTCGTATGTATGGGAAGTATCCCTTATCGCCGCCGTAGTACAATACTT
AGTGTAGAAGGGTTCCTAGCTTACATGGAAGTATATACGAGCGCTAAGTT
TTTGGCTATGGGTTGTCTCCGTCCAGTCGGTGATATTTTATTGTTTTTGT
TCTCTTCGCTGTCGAAGTCGCTTGTTTTGTGTGTCGCCCGTCCTTTGGAC
CGGTCTGTTTGTTTAGTGTTAGGGGAAGAAAGTGCCCGCGCATGTTGTGA
AATGTTGGCAACAACAGCGGTATTCCCGGCTGTCTGGCCGTCTCATTGAA
AAGAGGTAAATCCGCGGCCGAGACTTGGTCTCTGTGGAGCCTTGGGTTCT
TGTTGCCATGTAGTATTTTTTTCTCGAGGCTTTTTTTTAGTGCATAGCAT
GTATGTGTTCGAGTGCGCTACTACATAGCATCGGAGAGGAGATGTTTGGT
GCTTGCTTGTTGATGATTGATGATGATGGTGGTTTCCACGTGGCGTTCGT
TAACGTTACATACAGTATTCGTTGGATTTGTTGTTTCGATACTGACTGGT
GGTATTTGTGTATAAAACAAAGTCTATGGTGTCAAGGGCAACTCGAGCAT
TGACCATGGGGTGGGGGGGGGTGTACTCAGTATCATGCATGCCGTAGTCG
TTAGACCATAGACCTCGCATCCCTACAAAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11482:69..3948+

>mRNA_Ecto-sp9_F_contig11482.1263.1 ID=mRNA_Ecto-sp9_F_contig11482.1263.1|Name=mRNA_Ecto-sp9_F_contig11482.1263.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=990bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11482:69..3948+ (Ectocarpus species9 EcSCA_722f female)
ATGAGTGTCGTCCCGCTCCACTCCGACCCGGAGGGGGTGATCATGGGGCT
CAACTGCTTCGAGCTGCACGATGAGCACCTCCTGCCGGAGAACGAGGAGT
TCTGCCTGGCCCTCAACGAGACGGCGTCGCGGCACGAGTACGAGGACCTC
ATATGAGTGTCGTCCCGCTCCACTCCGACCCGGAGGGGGTGATCATGGGG
CTCAACTGCTTCGAGCTGCACGATGAGCACCTCCTGCCGGAGAACGAGGA
GTTCTGCCTGGCCCTCAACGAGACGGCGTCGCGGCACGAGTACGAGGACC
TCATGAACACGACGTTCGGCCTTGTGCCCGCAGGCCGCCAGCCCGCGACG
TACCGCCTCGCCGAGGTGATGAGCGCCGGCGCCATCCCCGTGTTCGTGTC
GAGGGACATGGTGAGGCCCTTCCCGGAGAGGGTGGACTGGCCGACGCTTT
CGTTCTCCTTCCCGCCGGAGGAGGTGGGGCCGGCCATGATGGACACGCTC
AGGTCGGTCGCCCCGGCGGAGCTGTTGGAAATGCAGGAACACGACGTTCG
GCCTTGTGCCCGCAGGCCGCCAGCCCGCGACGTACCGCCTCGCCGAGGTG
ATGAGCGCCGGCGCCATCCCCGTGTTCGTGTCGAGGGACATGGTGAGGCC
CTTCCCGGAGAGGGTGGACTGGCCGACGCTTTCGTTCTCCTTCCCGCCGG
AGGAGGTGGGGCCGGCCATGATGGACACGCTCAGGTCGGTCGCCCCGGCG
GAGCTGTTGGAAATGCAGCGAAAGTCGGTGCAGGCGTTTTATGAGATTTT
TGGGGAGGAGCCCGGGTACGACCGAATCGCTCGCGTCGTGGTCGACGAGC
TGGTGCTCCGCGTCGGGTATCACCGATGACGAAAGTCGGTGCAGGCGTTT
TATGAGATTTTTGGGGAGGAGCCCGGGTACGACCGAATCGCTCGCGTCGT
GGTCGACGAGCTGGTGCTCCGCGTCGGGTATCACCGATGA
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