mRNA_Ecto-sp9_F_contig1141.1214.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1141.1214.1
Unique NamemRNA_Ecto-sp9_F_contig1141.1214.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1141.1214.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL98_9PHAE)

HSP 1 Score: 496 bits (1277), Expect = 1.670e-167
Identity = 390/467 (83.51%), Postives = 393/467 (84.15%), Query Frame = 2 
Query:  236 MAPQPRAAQVSPPKPWDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYARPLSSVSGQPQQLGQQRGGLPVRTAGSAPAVGAGSGVAAGGIRRLSSVGGRAATTXXXXXXXASRGAPGGEGXXXXXXXXXQDVXXXXXXXXXXXXXXXXXXXXTSTAPVVGQQQQQQAGYGTYGGVQSGYGSTAGSYGPANRXXXXXXXXXXXXXXSSYGSSYGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYGASRYGTGGMGXXXXXGGMDQQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPDEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSLQQRGGVGGXXXXXXXXXXXXXRMGRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVDGMDPWSGF 1636
            MAPQPRAAQVSPPK WDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RYAR LSSV GQPQQL QQRGGLPVRTAGSAPAV AGSGVAAGG+ RLSSVGGR ATT       ASRG  GGEG         QDV       XXXXXXX      TSTAPVVG QQQQQAG GTYGGVQSGYGSTAG+YGPA  XXXXXXXXXXXXXXSSYGSSYGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYGASRYG GGMGXXXXXGGMD QYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTP+EERRRLSRLRVLRFALTLVVAYAGFR SRALHRLISGRHRPRPAIAQASLEDIYSLQQRG VGG             RMGRH    XXXXXXX        XXXXXXXXXXEG DGMDPWSGF
Sbjct:    1 MAPQPRAAQVSPPKSWDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RYARSLSSVIGQPQQLAQQRGGLPVRTAGSAPAVAAGSGVAAGGMSRLSSVGGRPATTGGNVARVASRGPSGGEGAAAVVSTAQQDVGAAEATAXXXXXXXGGLANGTSTAPVVGHQQQQQAGNGTYGGVQSGYGSTAGNYGPAXXXXXXXXXXXXXXXXSSYGSSYGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYGASRYGMGGMGXXXXXGGMDHQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRASRALHRLISGRHRPRPAIAQASLEDIYSLQQRGRVGGGNGQARTAVGAADRMGRHQQRGXXXXXXXESAVAGAGXXXXXXXXXXEGFDGMDPWSGF 465
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BLAST of mRNA_Ecto-sp9_F_contig1141.1214.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW3_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 1.270e-64
Identity = 136/161 (84.47%), Postives = 137/161 (85.09%), Query Frame = 2 
Query: 1154 ANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPDEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSLQQRGGVGGXXXXXXXXXXXXXRMGRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVDGMDPWSGF 1636
            ANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTP+EERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSLQQRGGVGG             RMGR         XXXXXXXXXXXXXXXXXXXXXEG DG DPWSGF
Sbjct:   13 ANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPEEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSLQQRGGVGGGNGRANAAAGAADRMGRRQQRGRVGWXXXXXXXXXXXXXXXXXXXXXEGFDGTDPWSGF 173
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BLAST of mRNA_Ecto-sp9_F_contig1141.1214.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLC2_9STRA)

HSP 1 Score: 174 bits (442), Expect = 6.140e-47
Identity = 83/136 (61.03%), Postives = 108/136 (79.41%), Query Frame = 2 
Query: 1040 GGMDQQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPDEERRRLSRLRVLRFALTLVVAYAGFRVSRALH-----RLISGRHRPRPAIAQASLEDIYS 1432
            GGM  Q+SWLHSIQHFTSS+GYLTE+LGMNTQAIGF   NLM F+E+ G +L S+QPWREFPPGHPRHGEPPPT +EERRR++R+RVLR+  +L++AYAGF++ R L      R ++ R  P   +A+ ++E+I+S
Sbjct:   59 GGMGPQFSWLHSIQHFTSSMGYLTELLGMNTQAIGFFVGNLMSFIENAGLALASLQPWREFPPGHPRHGEPPPTAEEERRRVTRVRVLRWVASLLIAYAGFKLLRLLRGAPQRRALTHRAAPTRMLAETAMENIFS 194
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BLAST of mRNA_Ecto-sp9_F_contig1141.1214.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW2_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 8.410e-38
Identity = 182/309 (58.90%), Postives = 186/309 (60.19%), Query Frame = 2 
Query:  236 MAPQPRAAQVSPPKPWDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYARPLSSVSGQPQQLGQQRGGLPVRTAGSAPAVGAGSGVAAGGIRRLSSVGGRAATTXXXXXXXASRGAPGGEGXXXXXXXXXQDVXXXXXXXXXXXXXXXXXXXXTSTAPVVGQQQQQQAGYGTYGGVQSGYGSTAGSYGPANRXXXXXXXXXXXXXXSSYGSSYGAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM---YGASRYGTGGMGXXXXXGGMDQQYSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVF 1153
            MAPQPRAAQVSPPKPWDQ XXXXXXXXXXXXXXXXXXXXXXXXXX     RYARPLSS           R GLP    G AP +           RR S + G+                                                                   AGYGTYGGVQSGYGSTAGSYGPAN XXXXXXXXXXXXXXSSYGSSYGAGG XXXXXXXXXXX           XXXXXX    YGASRYGTGGMGXXXX GGMDQQYSWLHSIQHF+SSLGYLTEMLGMNTQAIGFVF
Sbjct:    1 MAPQPRAAQVSPPKPWDQQXXXXXXXXXXXXXXXXXXXXXXXXXXAGGGERYARPLSSQV-------SLREGLPE---GKAPLLLP---------RRRSKMWGQ--------------------------------------------------------XXXXXXXXXXXAGYGTYGGVQSGYGSTAGSYGPANXXXXXXXXXXXXXXXSSYGSSYGAGGYXXXXXXXXXXXGYGGGMSSMYGXXXXXXXXXXYGASRYGTGGMGXXXXMGGMDQQYSWLHSIQHFSSSLGYLTEMLGMNTQAIGFVF 234
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BLAST of mRNA_Ecto-sp9_F_contig1141.1214.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWF4_9STRA)

HSP 1 Score: 107 bits (267), Expect = 3.290e-23
Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 2 
Query: 1067 LHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQPWR-EFPPGHPRHGEPPPTPDEERRRLSRLRVLRFALTLVVAYAGFRVSRA---LHRLISGRHRPRPAIA 1405
            LH       SLG LTE+LGMNT A+G + ++ +G LE + + ++ +QPW+ +FPPGHPRHGEP PTP+EERRR+ RLRVLRF      AY  ++ +     L RL+ G  R  PA+A
Sbjct:    5 LHGFHQAIMSLGQLTELLGMNTHALGQLGSSCLGILEAVSSFISHLQPWQPDFPPGHPRHGEPQPTPEEERRRIHRLRVLRFFTACFAAYLAYKYAHRWSWLRRLL-GLRRQLPALA 120
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1141.1214.1 vs.
Match: Peroxin-13 (n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z127_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 7.950e-16
Identity = 47/127 (37.01%), Postives = 78/127 (61.42%), Query Frame = 2 
Query: 1064 WLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTS----IQPWREFPPGHPRHGEPPPTPDEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYS 1432
            WL+S     S++G +T++LGMN +A+ F F N + F+E +    TS    + P   FPPGHPR+GEPP T +E + RL R++V++F ++L++ Y   ++ + L R++  R R  P   +  L+ IY+
Sbjct:  155 WLNSFNQTVSAVGQITQLLGMNAEALNFCFGNFVHFMERMAFMCTSAVAMLSPKPVFPPGHPRYGEPPETEEEIKSRLRRVKVVKFVVSLLIIYVASKLGQKL-RMLLWRTRKSPQ-KRLPLDSIYN 279
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BLAST of mRNA_Ecto-sp9_F_contig1141.1214.1 vs.
Match: Peroxin-13 (n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WCQ5_PHYIN)

HSP 1 Score: 89.0 bits (219), Expect = 1.200e-15
Identity = 46/101 (45.54%), Postives = 62/101 (61.39%), Query Frame = 2 
Query: 1064 WLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQ----PWREFPPGHPRHGEPPPTPDEERRRLSRLRVLRFALT---LVVAYAGFR 1345
            WL+S     SS+G +TE+LGMN +A+ F   + + FLE IG     I     P   FPPGHPRHGEPP T +EE+ RL R+R+++F ++   L V Y G R
Sbjct:  172 WLNSFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAVCAGIAAMLAPRPTFPPGHPRHGEPPVTEEEEKSRLRRVRIVQFMVSMAALTVVYKGLR 272
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BLAST of mRNA_Ecto-sp9_F_contig1141.1214.1 vs.
Match: Peroxin-13 (n=9 Tax=Phytophthora TaxID=4783 RepID=A0A329SG37_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.440e-15
Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 2 
Query: 1064 WLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQ----PWREFPPGHPRHGEPPPTPDEERRRLSRLRVLRFALT---LVVAYAGFR 1345
            WL+S     SS+G +TE+LGMN +A+ F   + + FLE IG     I     P   FPPGHPRHGEPP T +EE+ RL R+R+ +F ++   L V Y G R
Sbjct:  180 WLNSFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAMCAGIAGMLAPRPVFPPGHPRHGEPPVTEEEEKSRLRRVRIFQFMVSMAALTVLYKGLR 280
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1141.1214.1 vs.
Match: Peroxin-13 (n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A3S2_PHYSP)

HSP 1 Score: 88.2 bits (217), Expect = 2.470e-15
Identity = 51/134 (38.06%), Postives = 75/134 (55.97%), Query Frame = 2 
Query: 1064 WLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSIQ----PWREFPPGHPRHGEPPPTPDEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASL---EDIYSLQQR 1444
            WL S     SS+G +TE+LGMN +A+ F   + + FLE IG     I     P   FPPGHPRHGEPP T +EE+ RL R+R+ +F +++      ++  R L RL S +   +  +A  S+    D+ ++ QR
Sbjct:  180 WLASFNQIVSSIGQITELLGMNAEALNFCIGSFVHFLERIGAMCAGIAAMLAPRPVFPPGHPRHGEPPVTEEEEKSRLRRVRIFQFMVSMAALGCVYKGLRWLARLRSPKAPAKLLVAPPSVGMGRDLENIFQR 313
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BLAST of mRNA_Ecto-sp9_F_contig1141.1214.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKF5_PYTOL)

HSP 1 Score: 87.8 bits (216), Expect = 2.760e-15
Identity = 58/150 (38.67%), Postives = 76/150 (50.67%), Query Frame = 2 
Query: 1013 GGMGXXXXXGGMDQQ--YSWLHSIQHFTSSLGYLTEMLGMNTQAIGFVFANLMGFLEHIGNSLTSI----QPWREFPPGHPRHGEPPPTPDEERRRLSRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPR-----PAIAQASLEDIY 1429
            GGM      G MD      WL S     SS+G +T+MLGMN  A+ F   + + F E IG     I     P  +FPPGHPRHGE   T +EE+ R+ R+R+ +F L+L    A ++ +R L  L   R RP      PA    SLE I+
Sbjct:  140 GGMMGGGMNGMMDPNGHMGWLTSFNQMVSSIGQITDMLGMNADALHFCITSFVNFFERIGGMFAGIAAMLSPRPQFPPGHPRHGEAQLTEEEEKSRVRRVRIFQFMLSLAAMGAMYKFARWLASL--RRQRPALLAAAPAATARSLESIF 287
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1141.1214.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
Uncharacterized1.670e-16783.51protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.270e-6484.47protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.140e-4761.03protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized8.410e-3858.90protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical3.290e-2348.72protein (Fragment) n=1 Tax=Fibrocapsa japonica Tax... [more]
Peroxin-137.950e-1637.01n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9... [more]
Peroxin-131.200e-1545.54n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0... [more]
Peroxin-132.440e-1545.54n=9 Tax=Phytophthora TaxID=4783 RepID=A0A329SG37_9... [more]
Peroxin-132.470e-1538.06n=1 Tax=Phytophthora sojae (strain P6497) TaxID=10... [more]
Uncharacterized2.760e-1538.67protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1141contigEcto-sp9_F_contig1141:11358..17117 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score93.2
Seed ortholog evalue3.5e-16
Seed eggNOG ortholog157072.XP_008866595.1
KEGG koko:K13344
KEGG TC3.A.20.1
KEGG Pathwayko04146,map04146
EggNOG OGs2AZRS@1,2S06D@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Exons7
Model size1980
Cds size1404
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928389.6862178-UTR-Ecto-sp9_F_contig1141:11357..115061622928389.6862178-UTR-Ecto-sp9_F_contig1141:11357..11506Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1141 11358..11506 +
1692277855.8462234-UTR-Ecto-sp9_F_contig1141:11357..115061692277855.8462234-UTR-Ecto-sp9_F_contig1141:11357..11506Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1141 11358..11506 +
1622928389.699222-UTR-Ecto-sp9_F_contig1141:12659..127451622928389.699222-UTR-Ecto-sp9_F_contig1141:12659..12745Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1141 12660..12745 +
1692277855.8583186-UTR-Ecto-sp9_F_contig1141:12659..127451692277855.8583186-UTR-Ecto-sp9_F_contig1141:12659..12745Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1141 12660..12745 +
1622928390.4502404-UTR-Ecto-sp9_F_contig1141:16776..171171622928390.4502404-UTR-Ecto-sp9_F_contig1141:16776..17117Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1141 16777..17117 +
1692277855.9274895-UTR-Ecto-sp9_F_contig1141:16776..171171692277855.9274895-UTR-Ecto-sp9_F_contig1141:16776..17117Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1141 16777..17117 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928389.7119718-CDS-Ecto-sp9_F_contig1141:12745..134251622928389.7119718-CDS-Ecto-sp9_F_contig1141:12745..13425Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1141 12746..13425 +
1692277855.8681252-CDS-Ecto-sp9_F_contig1141:12745..134251692277855.8681252-CDS-Ecto-sp9_F_contig1141:12745..13425Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1141 12746..13425 +
1622928390.3822825-CDS-Ecto-sp9_F_contig1141:13964..141631622928390.3822825-CDS-Ecto-sp9_F_contig1141:13964..14163Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1141 13965..14163 +
1692277855.87743-CDS-Ecto-sp9_F_contig1141:13964..141631692277855.87743-CDS-Ecto-sp9_F_contig1141:13964..14163Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1141 13965..14163 +
1622928390.3998327-CDS-Ecto-sp9_F_contig1141:14584..146241622928390.3998327-CDS-Ecto-sp9_F_contig1141:14584..14624Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1141 14585..14624 +
1692277855.8899271-CDS-Ecto-sp9_F_contig1141:14584..146241692277855.8899271-CDS-Ecto-sp9_F_contig1141:14584..14624Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1141 14585..14624 +
1622928390.4136953-CDS-Ecto-sp9_F_contig1141:15314..154041622928390.4136953-CDS-Ecto-sp9_F_contig1141:15314..15404Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1141 15315..15404 +
1692277855.8998601-CDS-Ecto-sp9_F_contig1141:15314..154041692277855.8998601-CDS-Ecto-sp9_F_contig1141:15314..15404Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1141 15315..15404 +
1622928390.4268842-CDS-Ecto-sp9_F_contig1141:15888..159801622928390.4268842-CDS-Ecto-sp9_F_contig1141:15888..15980Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1141 15889..15980 +
1692277855.9077518-CDS-Ecto-sp9_F_contig1141:15888..159801692277855.9077518-CDS-Ecto-sp9_F_contig1141:15888..15980Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1141 15889..15980 +
1622928390.437928-CDS-Ecto-sp9_F_contig1141:16473..167761622928390.437928-CDS-Ecto-sp9_F_contig1141:16473..16776Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1141 16474..16776 +
1692277855.915563-CDS-Ecto-sp9_F_contig1141:16473..167761692277855.915563-CDS-Ecto-sp9_F_contig1141:16473..16776Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1141 16474..16776 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1141.1214.1prot_Ecto-sp9_F_contig1141.1214.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1141 12746..16776 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1141.1214.1

>prot_Ecto-sp9_F_contig1141.1214.1 ID=prot_Ecto-sp9_F_contig1141.1214.1|Name=mRNA_Ecto-sp9_F_contig1141.1214.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=468bp
MAPQPRAAQVSPPKPWDQQQQQPPPPGGALGSPSSAAAPTTLASGAGGGG
RYARPLSSVSGQPQQLGQQRGGLPVRTAGSAPAVGAGSGVAAGGIRRLSS
VGGRAATTGGNAASVASRGAPGGEGAAAVVSTAQQDVGAAAATAAGATAA
NGGLANGTSTAPVVGQQQQQQAGYGTYGGVQSGYGSTAGSYGPANRYGTT
GAYGGAGGYGSSYGSSYGAGGYGGYGGYGGGYGGGMSSMYGGGYGSYGGG
MYGASRYGTGGMGMGMGMGGMDQQYSWLHSIQHFTSSLGYLTEMLGMNTQ
AIGFVFANLMGFLEHIGNSLTSIQPWREFPPGHPRHGEPPPTPDEERRRL
SRLRVLRFALTLVVAYAGFRVSRALHRLISGRHRPRPAIAQASLEDIYSL
QQRGGVGGGNGRARAAAGAADRMGRHQQRGRVGWGGGGSAVSGAGAGGGG
FGGSGEGVDGMDPWSGF*
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mRNA from alignment at Ecto-sp9_F_contig1141:11358..17117+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1141.1214.1 ID=mRNA_Ecto-sp9_F_contig1141.1214.1|Name=mRNA_Ecto-sp9_F_contig1141.1214.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=5760bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1141:11358..17117+ (Ectocarpus species9 EcSCA_722f female)
AGAGCTCCGCCATCGACTGGTACACAGACACAGACACAGACACCTCTTGT
GTGTGGCGTTCTTCTTTCTGCGCCTTCCGGCTCGAAAAGAAGACAAGAGG
GAGGATTGCTGCTTGGCCTTTGGGAAGCGAGAAGTATCCTCTTGTTCAGG
TGCGTTCGGAAACGACGCTCGAGACATCGGGGGCTCGTGTTAGACCTGCT
TGCTGCACAAATCCTCACGTGTTTTCAACTTGCGGCTCCTGACGTAATTT
TAGCTTGAAGAGTACATATGGATGTTGCGCTGTACTCTATATATTGGGGC
CTGTGGCGATGGTGGTCCAAGGGGTCTGTTATTTGGCGCTAGCCGTGTTT
CTTAGAGGTTACGTTGAGTACAACAGATGCGCCGCATTTGGTTGAAGGCT
CGTTGTACAAAAAAGGTGGCCAGATGGCCCCTCGCCGCGCCTTCTGCATA
CCCAAATTGGCGGTGGTGGCGGGGGGAAGCCTAGCTTCGGTCGTGCTGCC
CACGTGAATGTTCACACCTATGTGGGGGGACGTTTTTCTCTTGTTCCACG
CGTGAAAACTCGGTGTCGTAACGCATCGGACAAAACAGCGCCAGCACAGT
GTCTCTTGGAAAATTCATCTCGCCGGTGTCCGGTGTCTGTGTTGACCCAA
CCCGTTGGGCGCCCCACCCCAGTCCACAGGTTTCGTATGCCGCCGTCCTA
GGTAGTTGCTGATGCGAATAGGTGGCATGCTTGAAGAACAAACTGCTTTG
TTCTTCACCGCTCCTGACGGTGGTCTCTGATTTCGGGGCGAACGCGGCAG
CAGTTACAGCAGTGTTATCGACGAGGGCTTACTCACGCCTGGAGACGCAG
CACTACAGCAGTTGTTGATCACGTAGTAGTTGCATACGGTGCTCCGGGTA
TAACTGACACCCGGGCTGTAAGCCGTAGAGAGTCGCTCCAGCGGGGAAGT
GAGTTGACAGCGCAGCACGTGTTCTCACCAACTGCTGTTGGTGGGAAACG
CGATTTTGTCATAGTCTAGGCAAGACCCCCGTTGTGTTGATGTATTGACT
TCAGCCTGCGGTGCCCTCACTTCAAGTAACAGCAGTACCTACTGCTGCGA
GTAGGCACCGCCGGGATGGTGATGTAGTACACCGAGGTCCGTTGATGATA
CCTTGGACAAATTTCCGTTAGAAATCGACCTGTAGGGCATACACAGCCTT
CTGGATGCCGAGATAGTTTGGGAGATACAGTCAGACCCCTGAACAATGTG
CAATTGCCCCCCCCCCCCCCAAACCGCGGCTTGCCTGTCCCCACGTCTGC
AGCACCCAAGATATCAACACCTCGACAAGGCAAGAACGCACGCGCGCTGC
AGTGAGCTGACGGGGCATTTTGGCGAGGGGTCAGAAGAATGGCCCCCCAA
CCAAGGGCGGCGCAAGTGTCCCCACCCAAGCCTTGGGACCAACAACAACA
ACAACCACCACCACCGGGCGGGGCGCTGGGCTCCCCTTCCTCAGCGGCAG
CGCCCACTACCCTCGCAAGTGGGGCGGGAGGAGGGGGGCGGTACGCCCGA
CCATTGTCGTCCGTGAGTGGGCAGCCACAGCAGTTGGGACAGCAGCGCGG
GGGGTTGCCGGTAAGGACAGCGGGATCAGCACCTGCTGTGGGTGCAGGCA
GCGGCGTCGCCGCAGGGGGCATTAGAAGGCTCAGCTCTGTCGGCGGGCGC
GCGGCGACTACCGGCGGAAACGCAGCAAGCGTTGCTTCGAGAGGGGCTCC
CGGAGGGGAAGGCGCCGCTGCTGTTGTCTCGACGGCGCAGCAAGATGTGG
GGGCAGCAGCAGCAACAGCTGCAGGTGCGACCGCAGCGAACGGCGGCTTG
GCTAACGGTACGTCGACTGCTCCTGTTGTTGGGCAGCAGCAACAACAGCA
AGCGGGATACGGGACATACGGAGGCGTCCAGAGCGGTTATGGGTCGACGG
CGGGGAGTTACGGGCCAGCGAATCGATACGGAACTACGGGCGCGTACGGG
GGCGCCGGCGGCTATGGGAGCAGTTACGGGAGCTCCTACGGGGCTGGAGG
GTATGGAGGGTACGGAGGGTGAGTGCAGGAGGAAGCCGACCATCGTTTCG
GTAACCGGGCCGTTGGTGACCCCATTGTTTCGGTTAGAGCACGATGCGCA
GGGTGCTGAGTGGAGGTCGAGGGCCAGTACGTGTTGAGAGACCGCACACT
CCCATGCTCACATCGGGAGGTACAGATGCCATGCTCTCTGTTGCCTTTGG
CATTTTAGGACCAGCTCAAGGTCAGTACAAGCGCTATGTGGCAATCTGAG
TGTCTTTGAGTGCTCCGAGACTGGCTGGCTACGTTGCAGCTCGCGAGACA
CAATCGCAATGTCGCCGCTCTCTCGCCGTCAGCCTTTCGAGCGGAAAGAC
TATGGTGGACAACGTCGGCGGCATGCGTTTGGCGTTTAACCGCGCCTTCC
CTGTATGTTCATGGGTAACAGTTTTGTTTTATTGAGAGTTTTTCTTCGTG
CCGCTCTCTCGGCCAATCACATCGCCATCGTCGTTCTCCACCTTCGTCTT
GACCATCCTCACCCAACCCTTTCTGCTTTCTGTTGTCGCTGCCTGAAAAC
AAACCAGATACGGTGGCGGCTACGGCGGCGGAATGTCCTCGATGTACGGC
GGGGGTTACGGCTCCTACGGGGGAGGGATGTACGGTGCAAGCCGATATGG
GACGGGCGGGATGGGGATGGGCATGGGCATGGGCGGTATGGACCAGCAGT
ACTCATGGCTGCATAGCATCCAGCACTTCACTTCATCCTTGGGTTACCTG
ACAGAGGTGGGGGGTTATATTCCTTCTTCTCAAGATCCATTATTGATGGA
AATGCAGCAGGAGTTGTTTTCCCGAAATTTTGGGAGGACATGTAGGCCAA
CGCACCGCGTCTTCCCGTATGGGGGGGTACTCATAGCCGTGAATGCCGTC
GTCGTTAGACCATTGACCTGGCATCCCTACGAAACCGGGACGGGGCACGC
TGGGTTCTCACCGGACCTGGCTCTTTGGGGGGGGGGGTCAACGCCCAGGT
CCGACAGATGGGACCCTGCTCGACATTGCTCACTGCACTGGTGGTGGTTT
GTTTGGTTGCCATTCGACGACGCCTCCAGCGCCTTTTGTGGCTGACCCGT
GTCTTTCATCGTCTGAATCATTGTGCGTGCGTGGCTGTTCCATTTTCTGC
TACGTGTGTGCGTGTCGACATTTTCAGATGCTAGGGATGAACACCCAGGC
GATCGGCTTCGTTTTCGGTGAGTCGCTTCCCCCGCCTCACGCATATCGTA
TGCTGCTATATATCAGATCCCCGCAGTACATTGTAACCGTCAAAATGCGG
CAGAATGAGCTCCCGCGGGGAGGGTGGGAGAAGTTCGCCTCGTAGCCGAG
TTTCAAAGCTCGATTGCTCGACCGGAGAAGAAGTTCCGTTGTCGGAAAGG
ACGACATTCGGAAATATCTCATGTAGAGGAATTCCGAATAGGTGTCGTTC
GGCATTTGTAGCCGTCTCCTTTCTGGAGCAATAGAGCTTTGAAAAAGAGA
TACGGTGCGTTGGTTGTGGAGACGTGGAGCTTTGAAATTCGGTCCAACGG
GGTACTATGTACACCGTCACAGATGGTCTGCGTGCGTTGTTTTTGCGCAC
TGTGAGACGAAGAGTCCGAGTACGTTGACACCTGGTCGTAGGAAAACTCG
AGGTATTTACCGAGCAGGTTTTATAGAGATGTTTGTGGAAAGTCAGACCA
GGCCCGTGTGCAGTCGGTACCTCGAGACGGAAAAGACTGGAACATGGAAT
TGCTTTCGTACCCGCACTAAAACGCGCACGTAAGGACAATCCAGCTCTGT
TGCACCTTTTTGTGTTATTTTGATCTGTACCCCGTGTGTGACCTGATGGT
CGCTGCCTCTCCCGTCAAATGTTGTTGTTGGCCGCCCGTGGTCGGATTCT
TTCACAGCGAACTTGATGGGCTTCCTCGAACACATCGGCAACAGCCTGAC
GTCGATACAGCCGTGGCGAGAGTTCCCGCCCGGCCACCCGAGACACGGTA
AGAGGAAGGCGCAGCCTCGTTGCGGTTGATCGAAGGCAGAGCGGTTTCTA
GAGAGCCATGTAGACTGTTCGCAACGGCTATTTTTTTTCGAGGTAACATC
ACAGAAGGACAACCCGTCCAGGGTAGTTTTTGAGATGGCATGCGTTGAAT
TTATTTTTTTTTGTTCACGAAATCCTGGACCGACCGACACTCATGTTTTC
TTTTGTGGATGCTTGGACCCTTGATTTCATACCGTTTTGGGGCTCCACTC
TAGGTGGGTGTCCGCCCGTGTTTTCAGATTGATCTTCTTGGCAGCTGGTC
GCTACGCTCACGCTCAACCGACAGTGTCGCACTATGATAGTGTTGGTTTT
CGTCGTGTTCAAGGGCGCCAAAGCACGCCTTGTTTGCAGCGACTACGACA
TCATCTCCGCATCCTCAGCAAGTCGCAAAAGCGCGAGAACTACCTCCTGA
ATCGAAAACCAAATGCCCCGCAATTTCTCAGGAGAACCGCCGCCGACGCC
AGACGAAGAGCGGCGACGCTTGAGTCGGCTGAGAGTGCTGCGGTTTGCGC
TTACCCTCGTCGTTGCTTACGCTGTGAGTGGCAGAACTTCTCGTTACATT
GCGGGGTTGGAAAGCGATAGGTGTCCATCATTGTTGCTAAACTTCGCAGT
CACTGTGTGTGGTTCGTTTTCCGCAGTTGGCGTTTCGTGGGAGGCTTGGG
GGGGGGCATGGTGCATCCAGCGTGGGCTTTCTGTGTGGTATTTGCGTGGT
GCTCTTGAAGCAGGACGCACTCCGCCGGAACCGGGTCTTCATGGTGCCTC
GACCCTGCCTGACATGCGCAGGTTGTCGTCGGATCCAGCGAAACCGCAGT
GCCGTTTTGTGCCAGCTACGTCGACGTACTTGCCTAGATCGGTCTTGAAG
CTGTAGGCAAAACATACCAAATTGGAAACCGAAAACAAGCCTCCTCCTTG
CCTTCCTTCCTTGCCGACGTGGTGTCCTTGCAATATGCTTGTTTTCAGTA
CCCACCGGCCCGATATCCACCACCCCTACCCCCCATGCATATCGTACGTG
CGCTCTACTCTATCAGGGTTTCCGAGTATCTCGCGCATTACACCGACTCA
TCTCTGGGCGACATCGACCAAGACCGGCGATCGCTCAAGCATCCTTGGAA
GACATTTACAGCTTACAGCAGCGGGGGGGCGTAGGCGGTGGGAACGGACG
AGCGAGGGCGGCGGCTGGGGCGGCAGATAGAATGGGTAGACATCAACAGA
GGGGGAGGGTGGGGTGGGGGGGTGGGGGGTCCGCTGTTTCCGGGGCGGGA
GCTGGAGGCGGGGGCTTTGGAGGTAGCGGGGAGGGGGTTGATGGGATGGA
TCCTTGGAGCGGGTTTTGATGTTTGTTGACGTTTCGCTGTGTATGCGTGA
AGTGAGTGAAGACACAGAGACGATAGTGTATTCAAGTTTCGATCTTCGGA
GACATTGTTGCATTGTTGCATTAGGTAAGACTGCTTTAAAGTCCTATGTT
CAGATGTGGTCTGTGGTTCGCTGTCGGGCGAGTGATAGATAGTCGTGGTA
ACTGTCTTCTCTTGTCAGTGTGCCACTGTTTTCTGCCGTGTACCATGATC
AATACCGTGGAACCTTTTTTAGGGATTGCTTAATCGAGTTTTTGGGCGAG
ATATCTGTCCGAGCGCTGAATGACGCACCGAGTGCAGGTAGAAGCGTGAC
TCAAGGGTGG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1141:11358..17117+

>mRNA_Ecto-sp9_F_contig1141.1214.1 ID=mRNA_Ecto-sp9_F_contig1141.1214.1|Name=mRNA_Ecto-sp9_F_contig1141.1214.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2808bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1141:11358..17117+ (Ectocarpus species9 EcSCA_722f female)
ATGGCCCCCCAACCAAGGGCGGCGCAAGTGTCCCCACCCAAGCCTTGGGA
CCAACAACAACAACAACCACCACCACCGGGCGGGGCGCTGGGCTCCCCTT
CCTCAGCGGCAGCGCCCACTACCCTCGCAAGTGGGGCGGGAGGAGGGGGG
CGGTACGCCCGACCATTGTCGTCCGTGAGTGGGCAGCCACAGCAGTTGGG
ACAGCAGCGCGGGGGGTTGCCGGTAAGGACAGCGGGATCAGCACCTGCTG
TGGGTGCAGGCAGCGGCGTCGCCGCAGGGGGCATTAGAAGGCTCAGCTCT
GTCGGCGGGCGCGCGGCGACTACCGGCGGAAACGCAGCAAGCGTTGCTTC
GAGAGGGGCTCCCGGAGGGGAAGGCGCCGCTGCTGTTGTCTCGACGGCGC
AGCAAGATGTGGGGGCAGCAGCAGCAACAGCTGCAGGTGCGACCGCAGCG
AACGGCGGCTTGGCTAACGGTACGTCGACTGCTCCTGTTGTTGGGCAGCA
GCAACAACAGCAAGCGGGATACGGGACATACGGAGGCGTCCAGAGCGGTT
ATGGGTCGACGGCGGGGAGTTACGGGCCAGCGAATCGATACGGAACTACG
GGCGCGTACGGGGGCGCCGGCGGCTATGGGAGCAGTTACGGGAGCTCCTA
CGGGGCTGGAGGGTATGGAGGGTACGGAGGATGGCCCCCCAACCAAGGGC
GGCGCAAGTGTCCCCACCCAAGCCTTGGGACCAACAACAACAACAACCAC
CACCACCGGGCGGGGCGCTGGGCTCCCCTTCCTCAGCGGCAGCGCCCACT
ACCCTCGCAAGTGGGGCGGGAGGAGGGGGGCGGTACGCCCGACCATTGTC
GTCCGTGAGTGGGCAGCCACAGCAGTTGGGACAGCAGCGCGGGGGGTTGC
CGGTAAGGACAGCGGGATCAGCACCTGCTGTGGGTGCAGGCAGCGGCGTC
GCCGCAGGGGGCATTAGAAGGCTCAGCTCTGTCGGCGGGCGCGCGGCGAC
TACCGGCGGAAACGCAGCAAGCGTTGCTTCGAGAGGGGCTCCCGGAGGGG
AAGGCGCCGCTGCTGTTGTCTCGACGGCGCAGCAAGATGTGGGGGCAGCA
GCAGCAACAGCTGCAGGTGCGACCGCAGCGAACGGCGGCTTGGCTAACGG
TACGTCGACTGCTCCTGTTGTTGGGCAGCAGCAACAACAGCAAGCGGGAT
ACGGGACATACGGAGGCGTCCAGAGCGGTTATGGGTCGACGGCGGGGAGT
TACGGGCCAGCGAATCGATACGGAACTACGGGCGCGTACGGGGGCGCCGG
CGGCTATGGGAGCAGTTACGGGAGCTCCTACGGGGCTGGAGGGTATGGAG
GGTACGGAGGATACGGTGGCGGCTACGGCGGCGGAATGTCCTCGATGTAC
GGCGGGGGTTACGGCTCCTACGGGGGAGGGATGTACGGTGCAAGCCGATA
TGGGACGGGCGGGATGGGGATGGGCATGGGCATGGGCGGTATGGACCAGC
AGTACTCATGGCTGCATAGCATCCAGCACTTCACTTCATCCTTGGGTTAC
CTGACAGAGATACGGTGGCGGCTACGGCGGCGGAATGTCCTCGATGTACG
GCGGGGGTTACGGCTCCTACGGGGGAGGGATGTACGGTGCAAGCCGATAT
GGGACGGGCGGGATGGGGATGGGCATGGGCATGGGCGGTATGGACCAGCA
GTACTCATGGCTGCATAGCATCCAGCACTTCACTTCATCCTTGGGTTACC
TGACAGAGATGCTAGGGATGAACACCCAGGCGATCGGCTTCGTTTTCGAT
GCTAGGGATGAACACCCAGGCGATCGGCTTCGTTTTCGCGAACTTGATGG
GCTTCCTCGAACACATCGGCAACAGCCTGACGTCGATACAGCCGTGGCGA
GAGTTCCCGCCCGGCCACCCGAGACACGCGAACTTGATGGGCTTCCTCGA
ACACATCGGCAACAGCCTGACGTCGATACAGCCGTGGCGAGAGTTCCCGC
CCGGCCACCCGAGACACGGAGAACCGCCGCCGACGCCAGACGAAGAGCGG
CGACGCTTGAGTCGGCTGAGAGTGCTGCGGTTTGCGCTTACCCTCGTCGT
TGCTTACGCTGAGAACCGCCGCCGACGCCAGACGAAGAGCGGCGACGCTT
GAGTCGGCTGAGAGTGCTGCGGTTTGCGCTTACCCTCGTCGTTGCTTACG
CTGGTTTCCGAGTATCTCGCGCATTACACCGACTCATCTCTGGGCGACAT
CGACCAAGACCGGCGATCGCTCAAGCATCCTTGGAAGACATTTACAGCTT
ACAGCAGCGGGGGGGCGTAGGCGGTGGGAACGGACGAGCGAGGGCGGCGG
CTGGGGCGGCAGATAGAATGGGTAGACATCAACAGAGGGGGAGGGTGGGG
TGGGGGGGTGGGGGGTCCGCTGTTTCCGGGGCGGGAGCTGGAGGCGGGGG
CTTTGGAGGTAGCGGGGAGGGGGTTGATGGGATGGATCCTTGGAGCGGGT
TTTGAGGTTTCCGAGTATCTCGCGCATTACACCGACTCATCTCTGGGCGA
CATCGACCAAGACCGGCGATCGCTCAAGCATCCTTGGAAGACATTTACAG
CTTACAGCAGCGGGGGGGCGTAGGCGGTGGGAACGGACGAGCGAGGGCGG
CGGCTGGGGCGGCAGATAGAATGGGTAGACATCAACAGAGGGGGAGGGTG
GGGTGGGGGGGTGGGGGGTCCGCTGTTTCCGGGGCGGGAGCTGGAGGCGG
GGGCTTTGGAGGTAGCGGGGAGGGGGTTGATGGGATGGATCCTTGGAGCG
GGTTTTGA
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