mRNA_Ecto-sp9_F_contig1140.1206.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1140.1206.1
Unique NamemRNA_Ecto-sp9_F_contig1140.1206.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1140.1206.1 vs.
Match: PB1 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI)

HSP 1 Score: 610 bits (1572), Expect = 8.250e-214
Identity = 426/506 (84.19%), Postives = 430/506 (84.98%), Query Frame = 1
Query:   49 MTTSSIKINFQGASRDVNVPAPVTLASLQAAIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLTVLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAEPDASAAAAPITAKISTPDNDNAGDTDDAEPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKAAHKRHGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGALHRHXXXXXXXXXXXXGGASHXXXXXXXXXXXXXGGRPHPFAPLPXXAHMEXXXXXXXXXXXRRRGGPLFHPAHQHNAEVFDEDEGSHPGFHPHHGPPRWMAIRRAHDGGGYGGGYGRVFGGGVGQQQRRDYYWG 1566
            MTTSSIKINFQG SRDVNVP PVTLASLQAAIA AFDAELPVRSPAGEA KDTDLSFTYKDPDGDDIVFDKDSEL LAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTP KL+KTL  L+LNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVS EP          A  S+P NDN    D   PEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLV+GKDLRAMLQAEKK AHKR GHDXXXXXXXXXXXXXXXXXXXXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXXXXX R GA H  XXXXXXXXXXXX GA HXXXXX       X           XX   EXXXXXXXXXXX   GGPLFHPAHQH AEVFDEDEG HPGFHPHHGPPRWMAIRRAH GGGYGGGY  VFGGGVGQQQRRDYYWG
Sbjct:    1 MTTSSIKINFQGTSRDVNVPVPVTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSVEP----------ADTSSPGNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAEKKVAHKRRGHDXXXXXXXXXXXXXXXXXXXXXXXXXMAGRPHPFAXXXXXXXXXXXXXXXXXXXXXXXXXXX-RHGAPHXXXXXXXXXXXXXXXGAPHXXXXXPPMKRMMXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXGGPLFHPAHQHYAEVFDEDEGGHPGFHPHHGPPRWMAIRRAHGGGGYGGGYVGVFGGGVGQQQRRDYYWG 495          
BLAST of mRNA_Ecto-sp9_F_contig1140.1206.1 vs.
Match: PB1 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE)

HSP 1 Score: 605 bits (1560), Expect = 8.690e-212
Identity = 383/524 (73.09%), Postives = 392/524 (74.81%), Query Frame = 1
Query:    1 MNTIKHNNN--RDNTDKTMTTSSIKINFQGASRDVNVPAPVTLASLQAAIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLTVLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAEPDASAAAAPITAKISTPDNDNAGDTDDAEPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKAAHKRHGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGALHRHXXXXXXXXXXXXGGASHXXXXXXXXXXXXXGGRPHPFAPLPXXAHMEXXXXXXXXXXXRRRGGPLFHPAHQHNAEVFDEDEGSHPGFHPHHGPPRWMAIRRAHDGGGYGGGYGRVFGGGVGQQQRRDYYWG 1566
            MN I HNNN  R N DKTMTT SIKINFQGASRDVNVPAPV+LASLQAAIAAAFDAELPVRSPAGEA KDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCP SLEISA  KE++PA KPDPEARLYKIAARNLREYNGVPSMT PKLIKTL  LKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAE DASAAA PITAK STPDNDN  + +DA PE KK+LIHKAFI GGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAML+AEKKAAHKR  H   XXXXXXXXXXXXXXX XXXXX                                        RG   RH    XXXXXXXX     XXXX         GGR        X AHME             RG PLFHP HQH AEVFDEDE  HPG HPHHGPPRWMAIR +H     GGGY       VGQQQRRD+YWG
Sbjct:    1 MNAINHNNNNNRYNNDKTMTTPSIKINFQGASRDVNVPAPVSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETKKDLIHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLRAEKKAAHKRCDHGNNXXXXXXXXXXXXXXXDXXXXXHRMAGRPHPFAPPPPSPPAHQEVGDAMFAA----------RGGRGRHGSPHXXXXXXXXXXXX-XXXXPPPMKGMMRGGRXXXXXXXXXPAHMEDPGDAPGGGGGGHRGVPLFHPVHQHYAEVFDEDERGHPGVHPHHGPPRWMAIRNSH-----GGGYXXXXXXXVGQQQRRDFYWG 508          
BLAST of mRNA_Ecto-sp9_F_contig1140.1206.1 vs.
Match: PB1 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 561 bits (1446), Expect = 4.230e-194
Identity = 388/537 (72.25%), Postives = 399/537 (74.30%), Query Frame = 1
Query:   49 MTTSSIKINFQGASRDVNVPAPVTLASLQAAIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLTVLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAEPDASAAAAPITAKISTPDNDNAGDTDDAEPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKAAHKRHGHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRG-------------------ALHRHXXXXXXXXXXXXGGASHXXXXXXXXXXXXX------GGRPHPFAP--------------LPXXAHMEXXXXXXXXXXXRRRGGPLFHPAHQHNAEVFDEDEGSHPGFHPHHGPPRWMAIRRAHDGGGYGGGYGRVFGGGVGQQ 1542
            MTTSSIKINFQG SR+VNV AP TLASLQA IAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSEL LAVRLCP SLEISAAGKENKP NKPDPE RLYKIAARNLREYNGVPSMT PKLIKTL  LKLNP+RLVKQGLAPK LLARMKAEAANN KVSKV LGDG+NNEDLAESVAAGMELMSVEDDKKE N+GFVSA+PDASAAA PITAK S+PDNDN  + DDA PEVKKNLIH AFIAGGIQLRPREVRPLLVALDVRP RLAKLGLV+GK LRAMLQAE KAAHKRHGHD             XXX                    XXXXXXXXXXXXXXXXXXXXXXXXXX                      + H+             GG  HXXXXXXXXXXXXX      GGRP  FAP                XX    XXXXXXXXXX  RRGGPLFHPAHQH  EVFDED G HPGF P+HGPPRWMAIRRAH GGGYG     VFGG VGQQ
Sbjct:    1 MTTSSIKINFQGTSRNVNVQAPFTLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTLGDGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVKKNLIHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYLRAMLQAETKAAHKRHGHDNNNDDTAALHHRRXXXRDYHRQQHRMTSRPHPFAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPSAHQEVGDAMFAAR---GGGRHXXXXXXXXXXXXXMKRTMRGGRPQRFAPPRPSRSXXXXXXXPXXXXXXXXXXXXXXXXXXVDRRGGPLFHPAHQHYTEVFDEDGGGHPGFRPYHGPPRWMAIRRAHGGGGYGXXXXXVFGGDVGQQ 534          
BLAST of mRNA_Ecto-sp9_F_contig1140.1206.1 vs.
Match: PB1 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI)

HSP 1 Score: 525 bits (1351), Expect = 3.010e-181
Identity = 280/319 (87.77%), Postives = 284/319 (89.03%), Query Frame = 1
Query:    1 MNTIKHNNNRDNTDKTMTTSSIKINFQGASRDVNVPAPVTLASLQAAIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLTVLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAEPDASAAAAPITAKISTPDNDNAGDTDDAEPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKAAHKRHG 957
            MNTIKHNNNRDN D TMTTSSIKINFQGASRDVNVPAPVTLASLQA IAAAFDAELPVRSP GEA KDTDLSFTYKDPDGDDIVFDKDSELKLA+RLCPGSLEISAAGKE K A  PD EARLYKIAARNLREYNGVPSMTPPKL+KTL  LKLNPQRLVKQGLAPK LL RMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMS+EDDKKEWNDGFVS EP          A  S+PDNDN    D   PEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKK AHKRHG
Sbjct:    1 MNTIKHNNNRDNNDNTMTTSSIKINFQGASRDVNVPAPVTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSLEDDKKEWNDGFVSVEP----------ADTSSPDNDNEEKNDAVAPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKTAHKRHG 309          
BLAST of mRNA_Ecto-sp9_F_contig1140.1206.1 vs.
Match: PB1 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE)

HSP 1 Score: 487 bits (1254), Expect = 1.740e-166
Identity = 265/319 (83.07%), Postives = 276/319 (86.52%), Query Frame = 1
Query:    4 NTIKHN-NNRDNTDKTMTTSSIKINFQGASRDVNVPAPVTLASLQAAIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLTVLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAEPDASAAAAPITAKISTPDNDNAGDTDDAEPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKAAHKRHG 957
            NTIK+N NNR N DKTMTTSSIKINFQGASRDV+VPAP TLA LQAAIAA F+ ELPVRS  GEA KDTDLSFTYKDPDGDDIVFDKDSEL LA+RLCPGSLEISAAGKENK    PD E  LYKIAARNLREYNGVPSMTPPKL+KTL  LKLNPQRLVKQGLAPK+LLARMKAE ANNAK+SKV LGDGKNNEDLAE VAAGME MSVEDDKKEWNDGFVS EP          A+ S+ DN N  + DDA PEVK+NLIHKAFIAGGIQLRPREVRPLLVALDVRP RLAKLGLVDGKDLRAMLQAEKKAAHKRHG
Sbjct:   12 NTIKYNRNNRYNNDKTMTTSSIKINFQGASRDVSVPAPATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVRLGDGKNNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSVEP----------AETSSSDNGNEEENDDAAPEVKQNLIHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDLRAMLQAEKKAAHKRHG 320          
BLAST of mRNA_Ecto-sp9_F_contig1140.1206.1 vs.
Match: PB1 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI)

HSP 1 Score: 467 bits (1201), Expect = 2.320e-160
Identity = 256/287 (89.20%), Postives = 263/287 (91.64%), Query Frame = 1
Query:    1 MNTIKHNNNRDNTDKTMTTSSIKINFQGASRDVNVPAPVTLASLQAAIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLTVLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAEPDASAAAAPITAKISTPDNDNAGDTDDAEPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDV 861
            MNTIKHNN  DN DK MTTSSIKINFQGASRDVNVPAPVTL SLQAAIAAAFDAELPVRSPAGEA KDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCP SLEISAA KE+KPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTL  LKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLA+SVAAGMELMSVED KKEWNDGFVSAE DA AAAAPITA+ S+PDND   + DDA PEVKKNLIHKAFIAGGIQLRPRE   L V++ V
Sbjct:    1 MNTIKHNN-CDNNDKMMTTSSIKINFQGASRDVNVPAPVTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLADSVAAGMELMSVED-KKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDDAAPEVKKNLIHKAFIAGGIQLRPREGLLLGVSIFV 285          
BLAST of mRNA_Ecto-sp9_F_contig1140.1206.1 vs.
Match: PB1 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 1.210e-159
Identity = 255/304 (83.88%), Postives = 264/304 (86.84%), Query Frame = 1
Query:   46 TMTTSSIKINFQGASRDVNVPAPVTLASLQAAIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLTVLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAEPDASAAAAPITAKISTPDNDNAGDTDDAEPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKAAHKRHG 957
            TMTTSSIKI FQGASRDVNV  PV LASLQAAIAAAFD ELP RS AGEA  DTDLSFTYKDPDGDDIVFDK+SEL+LA+RLCPGSLEISAAGKENK    PD E +LYKIAARNLREYNGVPSMTPPKL+KTL  LKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVED KKEWNDGFVS EP          A+IS P NDN  + +DA PE KKNLIHKAFIAGGIQLRPREVRPLLVALDV P RLAKLGLV GKDLRAML+AEKK AHKRHG
Sbjct:   18 TMTTSSIKITFQGASRDVNVRVPVMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDGKKEWNDGFVSVEP----------AEISFPANDNE-EKNDAAPEAKKNLIHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDLRAMLRAEKKTAHKRHG 310          
BLAST of mRNA_Ecto-sp9_F_contig1140.1206.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 8.600e-13
Identity = 65/174 (37.36%), Postives = 84/174 (48.28%), Query Frame = 1
Query:  331 NKPANKP--DPEARLYKIAARNLREYNGVPSMTPPKLIKTLTVLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAEPDASAAAAPITAKISTPDNDNAGDTDDAEPEVKKNLIHKAFIAGGIQLRPREVRPLL 846
            NKP+ K   +P   LYK AARNL EY+GVPSMT   L KT+ +L+L P RLV QGLAPK LL              K   GD                    E D ++ ++  VS + + ++            D+    D+ D E    K+ IH  F+A G+QLRPRE RPLL
Sbjct:   37 NKPSCKRAVEPNPLLYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLE------------GKSAAGDAXX---XXXXXXXXXXXXXXEVDPEQADNNQVSDDSNTNSRDGTDIEH----DHVATQDSIDIETGASKHPIHAVFVAAGVQLRPRETRPLL 191          
BLAST of mRNA_Ecto-sp9_F_contig1140.1206.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE)

HSP 1 Score: 80.9 bits (198), Expect = 1.180e-12
Identity = 59/171 (34.50%), Postives = 81/171 (47.37%), Query Frame = 1
Query:  352 DPEARLYKIAARNLREYNGVPSMTPPKLIKTLTVLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAEPDASAAAAPITAKISTPDNDNAGD---TDDA---EPEVKKNLIHKAFIAGGIQLRPREVRPLL 846
            +P   ++K AARNLREY+GVPS+TP  L  T+ +L+L P RLV QGLAPK+LL                                 G     V+ D  + + GF + E  A+   +   +  S+   D   D   T ++   E    K+ I   F+A G+QLRPRE RPLL
Sbjct:   36 EPNPLMFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLK--------------------------------GNSTAGVDADSTDGSGGFEAEEEQANNQFSHDLSSNSSDGGDTGNDNIVTQNSIGFEARASKHPIQAVFVAVGVQLRPRETRPLL 174          
BLAST of mRNA_Ecto-sp9_F_contig1140.1206.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 2.070e-8
Identity = 37/61 (60.66%), Postives = 44/61 (72.13%), Query Frame = 1
Query:  331 NKPANKPDPEAR--LYKIAARNLREYNGVPSMTPPKLIKTLTVLKLNPQRLVKQGLAPKVL 507
            NKP+ K   E+   LYK AARNLREY+GVPSMT   L KT+ +L+L P RLV QGLAPK +
Sbjct:   39 NKPSCKLTGESNPLLYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXI 99          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1140.1206.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
PB18.250e-21484.19domain-containing protein n=1 Tax=Ectocarpus silic... [more]
PB18.690e-21273.09domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
PB14.230e-19472.25domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
PB13.010e-18187.77domain-containing protein n=1 Tax=Ectocarpus silic... [more]
PB11.740e-16683.07domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
PB12.320e-16089.20domain-containing protein n=1 Tax=Ectocarpus silic... [more]
PB11.210e-15983.88domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized8.600e-1337.36protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.180e-1234.50protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.070e-860.66protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1140contigEcto-sp9_F_contig1140:15089..17619 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-05_003710.1
Exons2
Model size1569
Cds size1569
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928388.9826365-CDS-Ecto-sp9_F_contig1140:15088..154241622928388.9826365-CDS-Ecto-sp9_F_contig1140:15088..15424Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1140 15089..15424 +
1692277855.4578764-CDS-Ecto-sp9_F_contig1140:15088..154241692277855.4578764-CDS-Ecto-sp9_F_contig1140:15088..15424Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1140 15089..15424 +
1622928389.0012126-CDS-Ecto-sp9_F_contig1140:16386..176191622928389.0012126-CDS-Ecto-sp9_F_contig1140:16386..17619Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1140 16387..17619 +
1692277855.4678497-CDS-Ecto-sp9_F_contig1140:16386..176191692277855.4678497-CDS-Ecto-sp9_F_contig1140:16386..17619Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1140 16387..17619 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1140.1206.1prot_Ecto-sp9_F_contig1140.1206.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1140 15089..17619 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1140.1206.1

>prot_Ecto-sp9_F_contig1140.1206.1 ID=prot_Ecto-sp9_F_contig1140.1206.1|Name=mRNA_Ecto-sp9_F_contig1140.1206.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=523bp
MNTIKHNNNRDNTDKTMTTSSIKINFQGASRDVNVPAPVTLASLQAAIAA
AFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPG
SLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLT
VLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAES
VAAGMELMSVEDDKKEWNDGFVSAEPDASAAAAPITAKISTPDNDNAGDT
DDAEPEVKKNLIHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDG
KDLRAMLQAEKKAAHKRHGHDNNDDDTAALHHQRHHHRDYHRQQHRMAGR
PPPLAPPPPPPPAHQEVGDAMFAARGGGGGGGGRRGALHRHGAPHRHGPP
HLHGGASHHHGPPPPMKKMMRGGRPHPFAPLPPPAHMEDDHEAPGGGGCR
RRGGPLFHPAHQHNAEVFDEDEGSHPGFHPHHGPPRWMAIRRAHDGGGYG
GGYGRVFGGGVGQQQRRDYYWG*
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mRNA from alignment at Ecto-sp9_F_contig1140:15089..17619+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1140.1206.1 ID=mRNA_Ecto-sp9_F_contig1140.1206.1|Name=mRNA_Ecto-sp9_F_contig1140.1206.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2531bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1140:15089..17619+ (Ectocarpus species9 EcSCA_722f female)
ATGAACACCATCAAACACAACAACAACCGCGACAACACCGACAAGACGAT GACTACCTCTTCCATCAAGATCAACTTCCAGGGCGCTTCACGCGACGTGA ACGTTCCGGCTCCGGTTACGCTCGCCAGCCTCCAAGCGGCCATCGCCGCC GCCTTCGATGCTGAGCTGCCTGTTCGCTCCCCCGCTGGCGAGGCCACCAA GGACACCGACCTGTCCTTCACGTACAAGGATCCTGATGGGGACGACATCG TGTTCGACAAGGATTCCGAGCTGAAGCTGGCCGTGCGCCTGTGCCCGGGC TCGCTCGAGATCTCGGCTGCCGGCAAGGAAAACAAGGTGAGCGAAGAGGC AGCAGATGTTTGCTCCTCTTCAAGGAGAGGAAAAAATCACGGTGTACAGC AGTCGAGGGTGCGTCTTGCGCGAGCGGGTACACAGATGCCGTCGCGGGTA ACTAGTCGTGCTGCGATACTCACGTCCCGTGCTCGCGCTGCTCCATTCGT TGTAGAGATGTTTTAATTGTTGGTTGCTTCTTGAGCTGGGCGAGACACTG GGTGTGAATCGAAGTTCTTCGGCCCCGCAAATCTCGGGCTATCTCTCTCG GCTGTCGACGCCTCTGTGTTGAGCTGGTCTCCGTATCGACCTTCGCCGTC TTACTTACATCATCTGCCGAGAGCTATCATTGATCATATGGTATCACCCA ATACGATATGGTATCGCCGGATACGATATGTGGCGATTGTCTCCATGGTA GACTGCCTTCAGAACTCGATAAAATCGGTGACCCAATGTAGGAAAGAGAA ACAATCTTCTGCTGTACCGTATATAGATGCATGCACTGCTGCCGTACGTC CCTGCTGTATTTTTCTGCTGTACACAGCAGCAGCAGCGTACCGGTACTGT ACATGCATCTACTGTAGTCTTCTCCTGTAATTCCCTGCAGAACCAGGGCA ATACAAACTAACCACTGATACTAATGTCCAACCCCCCCACATGTCGCATT TTTGCCGAAACGTTGAACCGCCCTACAAGTGTGTGTGCACAGCAGTCATA CGCGCCTTCTCCGTGACCAATGCTTTTCGACCTGATTTTTCTGTTTTCGT TGCCGGCATTTTCTCATCGAAATGTCTTCGTCGTTCTTGTTGCGTAGACC ACTACCAGAAGTTGGCCCCATTTTACCTGTACCGCCAAGAATTCCTTTTC CCCCGCAACCGCACCCCGCTGAATGCCCCCTTGCCTTTCCTTCCCCACCC TGTGCACCTCTTCCCTCTTCCCTCTTCCCTCTTTACATGTAACCTCAGCC TGCTAACAAGCCCGACCCCGAAGCGAGGCTGTACAAGATCGCCGCCCGTA ACCTGCGCGAGTACAACGGCGTGCCCTCCATGACCCCACCCAAGCTGATC AAGACCCTGACTGTCCTCAAGCTGAACCCGCAACGCCTCGTGAAGCAGGG CCTCGCTCCTAAGGTTCTTCTGGCTCGTATGAAGGCCGAAGCCGCCAACA ACGCCAAGGTATCAAAGGTTCCTCTTGGTGACGGCAAGAACAACGAGGAT CTCGCCGAATCGGTCGCCGCCGGCATGGAACTGATGAGCGTGGAGGACGA CAAGAAGGAATGGAACGACGGCTTCGTGTCCGCCGAGCCGGACGCTTCTG CTGCCGCGGCGCCCATCACCGCCAAGATTTCCACCCCCGACAACGACAAC GCGGGGGACACTGACGACGCTGAGCCTGAGGTCAAGAAGAACCTCATCCA CAAGGCCTTCATCGCCGGCGGCATCCAGCTCCGCCCTCGCGAGGTGCGGC CCCTGCTCGTCGCCCTGGACGTCCGCCCCTGCCGGCTGGCCAAGCTCGGC CTCGTCGACGGCAAGGATCTCCGCGCTATGCTCCAAGCCGAGAAGAAGGC CGCCCACAAGCGTCACGGCCATGACAACAACGACGATGACACCGCCGCCC TCCACCACCAGCGCCACCACCACCGCGACTACCACCGCCAGCAGCACCGC ATGGCCGGCCGCCCCCCCCCCCTCGCCCCCCCCCCCCCCCCCCCCCCGGC TCACCAGGAGGTCGGCGACGCCATGTTTGCCGCGCGCGGCGGCGGCGGCG GCGGCGGCGGCCGCCGCGGTGCCCTTCACCGCCACGGTGCCCCCCACCGC CACGGCCCCCCTCACCTCCACGGCGGTGCCTCGCACCACCACGGCCCGCC CCCTCCGATGAAGAAGATGATGCGCGGCGGCCGCCCCCACCCCTTCGCCC CCCTCCCTCCCCCGGCTCACATGGAGGACGACCACGAGGCGCCCGGTGGC GGAGGCTGTAGGCGCCGCGGTGGCCCCCTCTTCCACCCGGCCCACCAGCA CAACGCGGAGGTGTTCGACGAGGATGAGGGAAGCCACCCCGGTTTCCACC CCCACCATGGCCCTCCTCGCTGGATGGCGATCCGCAGGGCTCACGACGGC GGTGGCTACGGTGGTGGCTACGGCCGTGTCTTCGGCGGCGGTGTTGGCCA GCAGCAGCGCAGGGACTACTACTGGGGGTGA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1140:15089..17619+

>mRNA_Ecto-sp9_F_contig1140.1206.1 ID=mRNA_Ecto-sp9_F_contig1140.1206.1|Name=mRNA_Ecto-sp9_F_contig1140.1206.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3138bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1140:15089..17619+ (Ectocarpus species9 EcSCA_722f female)
ATGAACACCATCAAACACAACAACAACCGCGACAACACCGACAAGACGAT
GACTACCTCTTCCATCAAGATCAACTTCCAGGGCGCTTCACGCGACGTGA
ACGTTCCGGCTCCGGTTACGCTCGCCAGCCTCCAAGCGGCCATCGCCGCC
GCCTTCGATGCTGAGCTGCCTGTTCGCTCCCCCGCTGGCGAGGCCACCAA
GGACACCGACCTGTCCTTCACGTACAAGGATCCTGATGGGGACGACATCG
TGTTCGACAAGGATTCCGAGCTGAAGCTGGCCGTGCGCCTGTGCCCGGGC
TCGCTCGAGATCTCGGCTGCCGGCAAGGAAAACAAGATGAACACCATCAA
ACACAACAACAACCGCGACAACACCGACAAGACGATGACTACCTCTTCCA
TCAAGATCAACTTCCAGGGCGCTTCACGCGACGTGAACGTTCCGGCTCCG
GTTACGCTCGCCAGCCTCCAAGCGGCCATCGCCGCCGCCTTCGATGCTGA
GCTGCCTGTTCGCTCCCCCGCTGGCGAGGCCACCAAGGACACCGACCTGT
CCTTCACGTACAAGGATCCTGATGGGGACGACATCGTGTTCGACAAGGAT
TCCGAGCTGAAGCTGGCCGTGCGCCTGTGCCCGGGCTCGCTCGAGATCTC
GGCTGCCGGCAAGGAAAACAAGCCTGCTAACAAGCCCGACCCCGAAGCGA
GGCTGTACAAGATCGCCGCCCGTAACCTGCGCGAGTACAACGGCGTGCCC
TCCATGACCCCACCCAAGCTGATCAAGACCCTGACTGTCCTCAAGCTGAA
CCCGCAACGCCTCGTGAAGCAGGGCCTCGCTCCTAAGGTTCTTCTGGCTC
GTATGAAGGCCGAAGCCGCCAACAACGCCAAGGTATCAAAGGTTCCTCTT
GGTGACGGCAAGAACAACGAGGATCTCGCCGAATCGGTCGCCGCCGGCAT
GGAACTGATGAGCGTGGAGGACGACAAGAAGGAATGGAACGACGGCTTCG
TGTCCGCCGAGCCGGACGCTTCTGCTGCCGCGGCGCCCATCACCGCCAAG
ATTTCCACCCCCGACAACGACAACGCGGGGGACACTGACGACGCTGAGCC
TGAGGTCAAGAAGAACCTCATCCACAAGGCCTTCATCGCCGGCGGCATCC
AGCTCCGCCCTCGCGAGGTGCGGCCCCTGCTCGTCGCCCTGGACGTCCGC
CCCTGCCGGCTGGCCAAGCTCGGCCTCGTCGACGGCAAGGATCTCCGCGC
TATGCTCCAAGCCGAGAAGAAGGCCGCCCACAAGCGTCACGGCCATGACA
ACAACGACGATGACACCGCCGCCCTCCACCACCAGCGCCACCACCACCGC
GACTACCACCGCCAGCAGCACCGCATGGCCGGCCGCCCCCCCCCCCTCGC
CCCCCCCCCCCCCCCCCCCCCGGCTCACCAGGAGGTCGGCGACGCCATGT
TTGCCGCGCGCGGCGGCGGCGGCGGCGGCGGCGGCCGCCGCGGTGCCCTT
CACCGCCACGGTGCCCCCCACCGCCACGGCCCCCCTCACCTCCACGGCGG
TGCCTCGCACCACCACGGCCCGCCCCCTCCGATGAAGAAGATGATGCGCG
GCGGCCGCCCCCACCCCTTCGCCCCCCTCCCTCCCCCGGCTCACATGGAG
GACGACCACGAGGCGCCCGGTGGCGGAGGCTGTAGGCGCCGCGGTGGCCC
CCTCTTCCACCCGGCCCACCAGCACAACGCGGAGGTGTTCGACGAGGATG
AGGGAAGCCACCCCGGTTTCCACCCCCACCATGGCCCTCCTCGCTGGATG
GCGATCCGCAGGGCTCACGACGGCGGTGGCTACGGTGGTGGCTACGGCCG
TGTCTTCGGCGGCGGTGTTGGCCAGCAGCAGCGCAGGGACTACTACTGGG
GGTGACCTGCTAACAAGCCCGACCCCGAAGCGAGGCTGTACAAGATCGCC
GCCCGTAACCTGCGCGAGTACAACGGCGTGCCCTCCATGACCCCACCCAA
GCTGATCAAGACCCTGACTGTCCTCAAGCTGAACCCGCAACGCCTCGTGA
AGCAGGGCCTCGCTCCTAAGGTTCTTCTGGCTCGTATGAAGGCCGAAGCC
GCCAACAACGCCAAGGTATCAAAGGTTCCTCTTGGTGACGGCAAGAACAA
CGAGGATCTCGCCGAATCGGTCGCCGCCGGCATGGAACTGATGAGCGTGG
AGGACGACAAGAAGGAATGGAACGACGGCTTCGTGTCCGCCGAGCCGGAC
GCTTCTGCTGCCGCGGCGCCCATCACCGCCAAGATTTCCACCCCCGACAA
CGACAACGCGGGGGACACTGACGACGCTGAGCCTGAGGTCAAGAAGAACC
TCATCCACAAGGCCTTCATCGCCGGCGGCATCCAGCTCCGCCCTCGCGAG
GTGCGGCCCCTGCTCGTCGCCCTGGACGTCCGCCCCTGCCGGCTGGCCAA
GCTCGGCCTCGTCGACGGCAAGGATCTCCGCGCTATGCTCCAAGCCGAGA
AGAAGGCCGCCCACAAGCGTCACGGCCATGACAACAACGACGATGACACC
GCCGCCCTCCACCACCAGCGCCACCACCACCGCGACTACCACCGCCAGCA
GCACCGCATGGCCGGCCGCCCCCCCCCCCTCGCCCCCCCCCCCCCCCCCC
CCCCGGCTCACCAGGAGGTCGGCGACGCCATGTTTGCCGCGCGCGGCGGC
GGCGGCGGCGGCGGCGGCCGCCGCGGTGCCCTTCACCGCCACGGTGCCCC
CCACCGCCACGGCCCCCCTCACCTCCACGGCGGTGCCTCGCACCACCACG
GCCCGCCCCCTCCGATGAAGAAGATGATGCGCGGCGGCCGCCCCCACCCC
TTCGCCCCCCTCCCTCCCCCGGCTCACATGGAGGACGACCACGAGGCGCC
CGGTGGCGGAGGCTGTAGGCGCCGCGGTGGCCCCCTCTTCCACCCGGCCC
ACCAGCACAACGCGGAGGTGTTCGACGAGGATGAGGGAAGCCACCCCGGT
TTCCACCCCCACCATGGCCCTCCTCGCTGGATGGCGATCCGCAGGGCTCA
CGACGGCGGTGGCTACGGTGGTGGCTACGGCCGTGTCTTCGGCGGCGGTG
TTGGCCAGCAGCAGCGCAGGGACTACTACTGGGGGTGA
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