mRNA_Ecto-sp9_F_contig1140.1205.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1140.1205.1 vs.
Match: Putative (gamma-glutamylcyclotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN69_ECTSI) HSP 1 Score: 351 bits (900), Expect = 3.500e-120 Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 1
Query: 223 MEDAAPAGAAAASAASPSVADGPGEDAPLFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRPREGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEACEDATQTATCYVWNASAEDQLYETWEPSTHFTEDGPVPDYVTMVERFSREIQEEGLLENTATAVDTAV 771
MEDAAP GAAAASAASPSVADGP ED PLFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRPREGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEAC+DATQTATCYVWNASAEDQLYETWEPSTHFTEDGPVPDYVTMVERFSREIQEEGLLENTATAVDTAV
Sbjct: 1 MEDAAPVGAAAASAASPSVADGPREDTPLFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRPREGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEACKDATQTATCYVWNASAEDQLYETWEPSTHFTEDGPVPDYVTMVERFSREIQEEGLLENTATAVDTAV 183
BLAST of mRNA_Ecto-sp9_F_contig1140.1205.1 vs.
Match: Putative (gamma-glutamylcyclotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNX4_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.040e-29 Identity = 67/145 (46.21%), Postives = 89/145 (61.38%), Query Frame = 1
Query: 301 APLFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRPREGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEACEDATQTATCYVWNASAEDQLYETWEPSTHFTEDGPVPDYVTMVERFSREIQEEGL 735
A +FVYGTLM +V+ LL +PS+ KA L G+HR+RIKD V+PAIRP+E GSV G++ + RE+ IFDLFED DY K V V +E + + T + YVWN SA ++LY W+ HF V Y M F ++ GL
Sbjct: 11 ATVFVYGTLMESRVVTTLLGHMPSSEKAVLPGFHRYRIKDRVYPAIRPKEDGSVSGIVFD-VTEREERIFDLFEDSDYDKETVTVTLE--DGSAVTCSAYVWNLSAAEELYGAWDFDAHFAPH--VDSYAVMCRDFIDDVLLRGL 150
BLAST of mRNA_Ecto-sp9_F_contig1140.1205.1 vs.
Match: Putative (gamma-glutamylcyclotransferase n=2 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9T8J5_9POAL) HSP 1 Score: 94.4 bits (233), Expect = 9.090e-20 Identity = 52/125 (41.60%), Postives = 77/125 (61.60%), Query Frame = 1
Query: 274 SVADGPGEDAPLFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRPREGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEACEDATQT-ATCYVWNASAEDQLYETWE 645
S AD GE +FVYG+LM E+V+ A+L+RVP A+L YHRF IK+ ++PAI P E V G ++TG+ E I D FED +Y + V++ + D+++T A YVW+ + + LY W+
Sbjct: 10 SAADVKGEPHTVFVYGSLMAEEVVRAILKRVPPAAPATLPNYHRFSIKERIYPAILPVENKKVAGKVITGVTDHELRILDAFEDVEYTRTRVEISLT---DSSETMADTYVWSDAEDPNLYGEWD 131
BLAST of mRNA_Ecto-sp9_F_contig1140.1205.1 vs.
Match: AIG2-like (protein D n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C8B64) HSP 1 Score: 94.0 bits (232), Expect = 1.180e-19 Identity = 51/144 (35.42%), Postives = 84/144 (58.33%), Query Frame = 1
Query: 307 LFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRPREGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEACEDATQTATCYVWNASAEDQLYETWE----PSTHFTEDGPVPDYVTMVERFSREIQE 726
+FVYG+LM ++V+ A+L RVP++ A L+ YHRF +KD ++PAI P E V G ++TG+ E ++ D FED +Y + VQ+ + + T A YVW+ + + LY W+ H + D++TM F +E+++
Sbjct: 17 VFVYGSLMADEVVSAILHRVPASSPALLNDYHRFSVKDRIYPAILPVESKKVAGRVITGISDAELIVLDAFEDYEYVRRTVQISLTDTSE-TMLADTYVWSDAKDPDLYGQWDFEEWKKLH------IKDFLTMTLGFVQELEQ 153
BLAST of mRNA_Ecto-sp9_F_contig1140.1205.1 vs.
Match: Putative (gamma-glutamylcyclotransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z7Y1_COCSC) HSP 1 Score: 90.5 bits (223), Expect = 1.330e-18 Identity = 51/115 (44.35%), Postives = 68/115 (59.13%), Query Frame = 1
Query: 307 LFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRP-REGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEACEDATQT-ATCYVWNASAEDQLYETWE 645
+FVYGTLM+E+V+ AL+ R P + A + GY R RIK +FPAI P E V GL++ GL+ E +FD FE E+Y+K D D +Q A+ YVW SA LY W+
Sbjct: 4 VFVYGTLMSEEVVAALIRRAPRQQPAKIRGYRRHRIKGFIFPAIVPAEESDEVNGLVLYGLNCEEMEVFDEFEGEEYYKTDA---TPILADGSQVDASVYVWQDSARHLLYGKWD 115
BLAST of mRNA_Ecto-sp9_F_contig1140.1205.1 vs.
Match: Putative (gamma-glutamylcyclotransferase n=2 Tax=Populus trichocarpa TaxID=3694 RepID=U5GCL0_POPTR) HSP 1 Score: 88.2 bits (217), Expect = 1.470e-17 Identity = 54/156 (34.62%), Postives = 80/156 (51.28%), Query Frame = 1
Query: 307 LFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRPREGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEACEDATQTATCYVWNASAEDQLYETWE--------------PSTHFTEDGPVPDYVTMVERFSREIQEEG 732
+FVYG+L+ + V+ ALL R+P + A L+GYHRF IK V+PAI P E V G ++ G+ E I D +ED +Y +V V V + + TQ A YVW+ + LY W+ S F +D P+ T + + Q++G
Sbjct: 15 VFVYGSLLADDVVRALLSRIPQSSPAILNGYHRFSIKGRVYPAILPVENKKVSGKVLHGITDPELYILDEYEDVEYERVTVDVSLMDNSNKTQ-ALAYVWSDKNDPNLYGEWDFEEWKRTQMEDFAKMSAEFRQDLEQPESKTRIATYESFYQQDG 169
BLAST of mRNA_Ecto-sp9_F_contig1140.1205.1 vs.
Match: AIG2-like (protein D isoform X3 n=2 Tax=Populus trichocarpa TaxID=3694 RepID=UPI000CCCF1F1) HSP 1 Score: 87.4 bits (215), Expect = 2.140e-17 Identity = 47/113 (41.59%), Postives = 67/113 (59.29%), Query Frame = 1
Query: 307 LFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRPREGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEACEDATQTATCYVWNASAEDQLYETWE 645
+FVYG+L+ + V+ ALL R+P + A L+GYHRF IK V+PAI P E V G ++ G+ E I D +ED +Y +V V V + + TQ A YVW+ + LY W+
Sbjct: 15 VFVYGSLLADDVVRALLSRIPQSSPAILNGYHRFSIKGRVYPAILPVENKKVSGKVLHGITDPELYILDEYEDVEYERVTVDVSLMDNSNKTQ-ALAYVWSDKNDPNLYGEWD 126
BLAST of mRNA_Ecto-sp9_F_contig1140.1205.1 vs.
Match: AIG2-like (protein D n=1 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E69435A) HSP 1 Score: 87.8 bits (216), Expect = 2.310e-17 Identity = 52/143 (36.36%), Postives = 79/143 (55.24%), Query Frame = 1
Query: 307 LFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRPREGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEACEDATQTATCYVWNASAEDQLYETWE----PSTHFTEDGPVPDYVTMVERFSREIQ 723
+FVYG+L+ ++V+ ALL RVPS+ A+LS YHRF+IK V+PAI P + V G ++ G+ E I D FED +Y + +V V + + A YVW+ + LY W+ H D+V M E F ++++
Sbjct: 20 VFVYGSLLADEVVRALLNRVPSSSSATLSDYHRFKIKGRVYPAILPVQSKKVTGRVLLGISGVELHILDEFEDVEYTRTEVDVFFTENSENLR-AYAYVWSNPNDPDLYAEWDFEEWKKVHMN------DFVKMTEEFKQQLE 155
BLAST of mRNA_Ecto-sp9_F_contig1140.1205.1 vs.
Match: Putative (gamma-glutamylcyclotransferase n=11 Tax=Brassiceae TaxID=981071 RepID=A0A078FK82_BRANA) HSP 1 Score: 87.0 bits (214), Expect = 4.070e-17 Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 1
Query: 274 SVADGPGEDAPLFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRPREGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEACEDATQTATCYVWNASAEDQLYETWEPSTHFTEDGPVPDYVTMVERFSREIQEEGLLENTATAVDT 765
S+ G LFVYG+L + +V+ LL RVP A LSG+HRF+IK+ ++P I P G V G ++ G+ E+ + D FED +Y + V+V + + Q T YVW + LY W+ D ++T ++F EE L T +DT
Sbjct: 2 SILSGKAAGHDLFVYGSLQDPQVVNVLLNRVPDHSSAVLSGFHRFKIKNRLYPTILPDSTGKVTGKVLKGITDDERKLLDDFEDVEYDRKAVEVVLTDTSEKLQVGT-YVWRNKDDPDLYAEWDFEEWKLHDREA--FITATKKF----MEERKLPEAKTRIDT 158
BLAST of mRNA_Ecto-sp9_F_contig1140.1205.1 vs.
Match: Putative (gamma-glutamylcyclotransferase n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AKT3_9LAMI) HSP 1 Score: 86.7 bits (213), Expect = 4.350e-17 Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 1
Query: 307 LFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRPREGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEACEDATQTATCYVWNASAEDQLYETWE 645
+FVYG+L+++ V+ ALL RVP + A L YHRF IK V+PAI P E V G ++ G+ RE I D FED +Y + V V + + QT T YVW + LY W+
Sbjct: 8 VFVYGSLLSDDVVSALLSRVPPSSPAILPNYHRFSIKGVVYPAIIPVEDKKVTGKVLLGITPRELHILDTFEDIEYERKTVDVLLTDSNETLQTDT-YVWQNKTDPNLYGEWD 119 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1140.1205.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1140.1205.1 >prot_Ecto-sp9_F_contig1140.1205.1 ID=prot_Ecto-sp9_F_contig1140.1205.1|Name=mRNA_Ecto-sp9_F_contig1140.1205.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=258bp MVEHVRSRPGTSPTILLLLVVFRTGSAFSLPARSWTSTLGRPARQLPQRSback to top mRNA from alignment at Ecto-sp9_F_contig1140:10460..14046+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1140.1205.1 ID=mRNA_Ecto-sp9_F_contig1140.1205.1|Name=mRNA_Ecto-sp9_F_contig1140.1205.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3587bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1140:10460..14046+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1140:10460..14046+ >mRNA_Ecto-sp9_F_contig1140.1205.1 ID=mRNA_Ecto-sp9_F_contig1140.1205.1|Name=mRNA_Ecto-sp9_F_contig1140.1205.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1548bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1140:10460..14046+ (Ectocarpus species9 EcSCA_722f female)back to top |