mRNA_Ecto-sp9_F_contig114.1199.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig114.1199.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB40_ECTSI) HSP 1 Score: 1228 bits (3177), Expect = 0.000e+0 Identity = 725/806 (89.95%), Postives = 738/806 (91.56%), Query Frame = 2
Query: 233 MVEAMVIERPDNPRAWVAEYIGRDEGTGSGSDRKDRTDVTRRGKRPQNTANSGWDTPRAPLPTTTTAATGGSAATTVDVNAYGERVEADTEEPEDVSDLNTLLLPSGALPLDVERFSVSYSGALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSRGALNSESVLRAMRAVVQGQVTAMIARFERLLGGSLEPLLQVLDAELALEGKHLGGRGPRAAAANGPHLLRLTRIVTSRERERVGHSSTFDLLWELYEDERKEAAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAGGLDPEVSVEGVTSCATQATTVGGEEVSSASQIRTTDGAARKHPQNGHEDADDSGILRRTSSSLSPGTTKITTTPGNHNFPRRPSTGRPRSGGGGASTASECRPGTALRHPVSADDLMLASCVAEGETGQGLGAVRRCWEGGEKDMGGEEQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIGQGVTPSRLRRSSSFSSTVGEKPASSARXXXXXSSKKDIRGYRRGTRASAGEIHGERTKWRWKRDLCTLLKRIGGLDKLSATKPSTGAIGNLGLISTVRYLVGEVPGNVEVTARLFMGKGRRRSCRLPVPLSTRDDEEEKAKQWATLREAFLSDRQVLVFHLTNHYALIFALREWRAPSTSDPTNAAATATASSGDRHPPPTSSACGAPLKPNGISRSRTTLNATSAVASGSDNVTSTGNSHXXXXXXXXXXXXTGRAGAPQDDCAGAAGRXXXXDDRTRCSDSASAATGDGWTRQILTARRGQRPAVWMDFEEARNILLRWEGYK 2650
MVEAMVIERPDNPRAWVAEYIGRDEGTGSGSDRKDRTDVTRRGKRPQNTANSGWDTPRAPLP TT AATGGSAAT VDVNAYGERVEADTEEPEDVSDLNTLLLPSGALPLDVERFSVSYS ALLTGWVKQGSPCCAAASVAGAWNALGGLPRGS GALNSESVLRAMRAVVQGQVT+MIARFERLLGGSLEPLLQVLDAELALEGKHLGGRGPRAA ANGPHLLRLTRIVTSRERERVGHSSTFDLLWELYEDERKEAAELXXXXXXXXXXXXXXXXXXXXXXXXXXXX TAGGL P+VSVEG TSCATQA TVGGEEV SASQIRTTDGAARKHPQNGH DADDSGIL RTSSS SPGTTK+TTTPGNHNFPRRPSTGRPRSGGGGASTASECRPGTALR PVSADDLMLASCVAEGETGQGLGAVRRCWEGGEKD+GGEEQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXX KIGQGVTPS SFSSTV EKPASSAR SSKKDIRGYRRGTRASAG HGERTKWRWKRDLCTLLKR+GGL+KLSATKPSTGAIGNLG+ISTVRYL GEVPGNVEVTARLFMGKGR+RSCRLPVPLSTRDDE+EKAKQWA LREAFLSDRQVL+FHLTNHYALIFALREWRAPSTSDPTNAA TSSACGA LKPNG SRSRTTLNATSAV+SGSDNVTSTGNSH TGRAGAPQDDCAGAAGR D RTRCSDSA+AATGDGWTRQ+LTARRGQRPAVWMDFEEARNILLRWEGYK
Sbjct: 1 MVEAMVIERPDNPRAWVAEYIGRDEGTGSGSDRKDRTDVTRRGKRPQNTANSGWDTPRAPLPNTTAAATGGSAATAVDVNAYGERVEADTEEPEDVSDLNTLLLPSGALPLDVERFSVSYSRALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSHGALNSESVLRAMRAVVQGQVTSMIARFERLLGGSLEPLLQVLDAELALEGKHLGGRGPRAAVANGPHLLRLTRIVTSRERERVGHSSTFDLLWELYEDERKEAAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGGLGPKVSVEGATSCATQAATVGGEEVGSASQIRTTDGAARKHPQNGHGDADDSGILGRTSSSPSPGTTKMTTTPGNHNFPRRPSTGRPRSGGGGASTASECRPGTALRRPVSADDLMLASCVAEGETGQGLGAVRRCWEGGEKDVGGEEQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXX----KIGQGVTPSI-----SFSSTVREKPASSARQQRRRSSKKDIRGYRRGTRASAGATHGERTKWRWKRDLCTLLKRLGGLNKLSATKPSTGAIGNLGVISTVRYLDGEVPGNVEVTARLFMGKGRQRSCRLPVPLSTRDDEQEKAKQWAALREAFLSDRQVLIFHLTNHYALIFALREWRAPSTSDPTNAAXXXXXXXXXXXXXXTSSACGAQLKPNGTSRSRTTLNATSAVSSGSDNVTSTGNSHAAAGTATATTGSTGRAGAPQDDCAGAAGRGRGKDGRTRCSDSANAATGDGWTRQLLTARRGQRPAVWMDFEEARNILLRWEGYK 797
BLAST of mRNA_Ecto-sp9_F_contig114.1199.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIX0_9PHAE) HSP 1 Score: 1201 bits (3106), Expect = 0.000e+0 Identity = 733/846 (86.64%), Postives = 754/846 (89.13%), Query Frame = 2
Query: 164 MDYGGRQQREAWFAAEASPFLSKMVEAMVIERPDNPRAWVAEYIGRDEGTGSGSDRKDRTDVTRRGKRPQNTANSGWDTPRAPLPTTTTAATGGSAATTVDVNAYGERVEADTEEPEDVSDLNTLLLPSGALPLDVERFSVSYSGALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSRGALNSESVLRAMRAVVQGQVTAMIARFERLLGGSLEPLLQVLDAELALEGKHLGGRGPRAAAANGPHLLRLTRIVTSRERERVGHSSTFDLLWELYEDERKEAAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAGGLDPEVSVEGVTSCATQATTVGGEEVS-SASQIRTTDGAARKHPQNGHEDADDSGILRRTSSSLSPGTTKITTTPGNHNFPRRPSTGRPRSGGGGASTASECRPGTALRHPVSADDLMLASCVAEGETGQGLGAVRRCWEGGEKDMGGEEQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIGQGVTPSRLRRSSSFSSTVGEKPASSARXXXXXSSKKDIRGYRRGTRASAGEIHGERTKWRWKRDLCTLLKRIGGLDKLSATKPSTGAIGNLGLISTVRYLVGEVPGNVEVTARLFMGKGRRRSCRLPVPLSTRDDEEEKAKQWATLREAFLSDRQVLVFHLTNHYALIFALREWRAPSTSDPTNAAATA--TASSGDRHPPPTSSACGAPLKPNGISRSRTTLNATSAVASGSDNVTSTGNSHXXXXXXXXXXXXTGRAGAPQDDCAGAAGRXXXXDDRTRCSDSASAATGDGWTRQILTARRGQRPAVWMDFEEARNILLRWEGYKILTLERGKDAPPST 2692
MDYG RQQREAWFAAEASPFLSKMVEAMVIERPDNPRAWVAEYIGRDEGTGSGSD+KDRT V RRGKRP+NTANS W TPRA LPTTT AATGG AA +DVNAYGERVEADTEEPEDVSDLNTLLLPSGALPLDVERFSVSYS ALLTGWVKQGSPCCAAASVAGAWNALGGLPRGS GALNSESVLRAMR VVQGQV AMIARFERLLGGSLEPLLQVLDAELALEGKHLGG+GPRAA ANGPHLLRLTRIVTSRERERVGHSSTFDLLWELYEDERKEAAEL XXXXXXXXXXXXXXXXXXXXXXXXXXX TAGGLDPEVSVEGVTSCATQAT VGGEEV SASQI+ TDGA RK QN HE+ DDSGIL + SSS S GT K+TTT GNHNFPRRPS GRPRSGGGGASTASECRPGTALR PVSA DLM ASCVAEGETGQGLGAVRRCWE GEK +G EEQ XXXXXXXXXXXXXXXXXXXXXXXXXXXX +GQGVT SR+RR SSF ST+G KPASSAR XXXXSSKKD RGYRRG SAG IHGERTKWRWKRDLC LLKRIGGLDKLSATKPSTGAIGNLGLISTVRYL GEVPGNVEVTARLFMGKGRRRSCRLPVPLS RD+EEEKAKQWA LR AFLSDRQVL+FHLTNHYALIFALREWRAPSTSDPT AAATA TASSGDRHPPPTSS CGAPLKPNG SRS TTL+ATSAVASG++ XXXXXXXXXXX TG AGA Q+DCAGA G+ D T S SASAATGDGWTRQILTARRGQRPAVWMDFEEARNILLRWEGYKILTL+RG PP+T
Sbjct: 1 MDYGDRQQREAWFAAEASPFLSKMVEAMVIERPDNPRAWVAEYIGRDEGTGSGSDKKDRTHVPRRGKRPENTANSSWGTPRALLPTTTAAATGGFAAKAIDVNAYGERVEADTEEPEDVSDLNTLLLPSGALPLDVERFSVSYSRALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSHGALNSESVLRAMRTVVQGQVAAMIARFERLLGGSLEPLLQVLDAELALEGKHLGGKGPRAAVANGPHLLRLTRIVTSRERERVGHSSTFDLLWELYEDERKEAAELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGGLDPEVSVEGVTSCATQATAVGGEEVGGSASQIQATDGAERKRSQNEHEEVDDSGILGKASSSFSTGTAKMTTTLGNHNFPRRPSAGRPRSGGGGASTASECRPGTALRRPVSAGDLMPASCVAEGETGQGLGAVRRCWESGEKGVGREEQX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGQGVTSSRVRRGSSFRSTIGGKPASSARQXXXXSSKKDTRGYRRGISTSAGAIHGERTKWRWKRDLCMLLKRIGGLDKLSATKPSTGAIGNLGLISTVRYLDGEVPGNVEVTARLFMGKGRRRSCRLPVPLSARDNEEEKAKQWAALRAAFLSDRQVLIFHLTNHYALIFALREWRAPSTSDPTIAAATAIATASSGDRHPPPTSSTCGAPLKPNGTSRSGTTLSATSAVASGNNXXXXXXXXXXXXXXXXXXXXSTGGAGASQNDCAGAVGQGLGKDGHTHRSASASAATGDGWTRQILTARRGQRPAVWMDFEEARNILLRWEGYKILTLDRGNPTPPTT 841
BLAST of mRNA_Ecto-sp9_F_contig114.1199.1 vs.
Match: Calpain (catalytic domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9N9_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.080e-23 Identity = 71/148 (47.97%), Postives = 92/148 (62.16%), Query Frame = 2
Query: 488 VEADTEEPEDVSDLNTLLLPSGALPLDVERFSVSYSGALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSRGALNSESVLRAMRAVVQGQVTAMIARFERLLGGSLEPLLQVLDAELALEGKHLGGRGPRAAAANGPHLLRLTRIVTS 931
+E DT + D DL +LLLP G LPL +R +V Y+ ALL GWV Q SPCCAAASVAGA+NAL G RG+ AL +VL + + ++ + ARFERLLG S+ PLL L +A +G+ LGG G RA +LLR R + +
Sbjct: 124 IEMDTLDSPDKLDLPSLLLPEGTLPLGHQRVAVCYNEALLRGWVAQPSPCCAAASVAGAFNALRGAARGTPRALTHFAVLSVLEETLCERIDNLRARFERLLGSSVAPLLDALRERVAADGRALGGAGARAVPRK--YLLRQVRELVA 269
BLAST of mRNA_Ecto-sp9_F_contig114.1199.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W675_9STRA) HSP 1 Score: 102 bits (254), Expect = 8.320e-22 Identity = 64/131 (48.85%), Postives = 76/131 (58.02%), Query Frame = 2
Query: 506 EPEDVSDLNTLLLPSGALPLDV-----ERFSVSYSGALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSRGALNSESVLRAMRAVVQGQVTAMIARFERLLGGSLEPLLQVLDAELALEGKHLGGRGPRAA 883
+ EDV D+ LLLP PLD +FSVSYS L GWVKQ SPCCAAAS+AGAWNA+ L R + AL+ + + + A AR ERLLG LEPL + A LA EGK LGG+ AA
Sbjct: 1 DKEDVVDVKALLLPPAPHPLDSINCTRSKFSVSYSRGALEGWVKQPSPCCAAASMAGAWNAVMRLHRSAPDALSHLEAVPIFADIQRELTMAKQARLERLLGAPLEPLKTQVIAALAAEGKRLGGKNDEAA 131
BLAST of mRNA_Ecto-sp9_F_contig114.1199.1 vs.
Match: Hypothetical (protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLB3_9EUGL) HSP 1 Score: 108 bits (270), Expect = 5.810e-21 Identity = 63/149 (42.28%), Postives = 85/149 (57.05%), Query Frame = 2
Query: 482 ERVEADTEEPEDVSDLNTLLLPSGALPLDVERFSVSYSGALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSRGALNSESVLRAMRAVVQGQVTAMIARFERL-LGGSLEPLLQVLDAELALEGKHLGGRGPRAAAANGPHLLRLTRIV 925
+++EADT E+ DL TLLLPSG +P+DV FS+ L GWVKQ SPCCAAAS AGAWN + G R + A N ++VL MRA+++ ++ A+ ERL L G L+PL + L +G LGG A + + V
Sbjct: 85 DQIEADTTHDEEAVDLETLLLPSGCIPVDVYNFSLHVCHGALHGWVKQHSPCCAAASTAGAWNIVTGRKRSAEDAQNQDTVLTVMRALLRDKMDDRKAKAERLYLEGPLDPLETAVRRHLETQGLTLGGESKTVKGATKKQIWAAIQAV 233
BLAST of mRNA_Ecto-sp9_F_contig114.1199.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8F3_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.650e-20 Identity = 59/127 (46.46%), Postives = 78/127 (61.42%), Query Frame = 2
Query: 1850 WRWKRDLCTLLKRIGGLDKLS-ATKPSTGAIGNLGLISTVRYLVGEVPGNVE-VTARLFMGKGR-RRSCRLPVPLSTRDDEEEKAKQWATLREAFLSDRQVLVFHLTNHYALIFALREWRAPSTSDP 2221
W WK DL +LK+ G+ KL+ A KPST IGN G++S VR L + VTA LFMG+G+ R+S ++ V L++ EE WA LR AFL+ L+FHL NHYA+I+ALREW +P
Sbjct: 68 WNWKSDLLEILKKRSGIIKLTNAAKPSTAPIGNWGILSAVRDLDDRLSAEGSTVTATLFMGRGKLRKSSKVKVGLNSSMVAEEVDHAWAELRTAFLTRDAALIFHLKNHYAIIYALREWEETVLEEP 194
BLAST of mRNA_Ecto-sp9_F_contig114.1199.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFP1_HETAK) HSP 1 Score: 97.4 bits (241), Expect = 2.400e-20 Identity = 58/112 (51.79%), Postives = 70/112 (62.50%), Query Frame = 2
Query: 566 DVERFSVSYSGALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSRGALNSESVLRAMRAVVQGQVTAMIARFERLLG-GSLEPLLQVLDAELALEGKHLGGRGPRAAAANGP 898
D ++FSVSYS LL GWVKQ SPCCAAASVAGAWNA+ GLPR AL VL M +++GQ+ RFERLLG +L+PLL+ L L +G PRA + P
Sbjct: 2 DFDKFSVSYSQRLLNGWVKQPSPCCAAASVAGAWNAVRGLPRRHPAALRHTHVLAHMTEMLEGQLREKQGRFERLLGCRTLDPLLEALTLRLEADGY------PRAPRKSDP 107
BLAST of mRNA_Ecto-sp9_F_contig114.1199.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEE4_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.420e-18 Identity = 77/197 (39.09%), Postives = 99/197 (50.25%), Query Frame = 2
Query: 488 VEADTEEPEDVSDLNTLLLP-SGALPLD---VERFSVSYSGALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSRGALNSESVLRAMRAVVQGQVTAMIARFERLLGGSLEPLLQVLDAELALEGKHLGG--RGPRAAAANGPHLLRLTRI-VTSR---------------------ERERVGHSSTFDLLWELYED 994
VE DT ED+ TLL P +G LP V +F SY GALL WVKQ SPCCAAA+VAGA N L GL R AL VL AMR V++ V + IA FER LG L P+L + + ++ +G+ G + + +G +LL R+ V +R E E + F LWELYE+
Sbjct: 100 VECDTAACEDLDITATLLGPWNGRLPTKEDGVHQFGCSYDGALLDAWVKQPSPCCAAAAVAGAINGLSGLHRHDDNALGPLDVLAAMRGVLRDLVESKIASFERKLGADLAPVLDAVASRVSSDGRKFGISLKKDKETGVDGKYLLACVRLEVEARAEACRRAVQRQRALELGEEVSEEEEEAPALAFCRLWELYEE 296
BLAST of mRNA_Ecto-sp9_F_contig114.1199.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FG58_9EUKA) HSP 1 Score: 98.2 bits (243), Expect = 5.480e-18 Identity = 83/276 (30.07%), Postives = 107/276 (38.77%), Query Frame = 2
Query: 1847 KWRWKRDLCTLLKRIGGLDKLSATKPSTGAIGNLGLISTVRYLVGEVPGNVEVTARLFMG--KGRRRSCRLPVPLSTRDDEEEKAKQWATLREAFLSDRQVLVFHLTNHYALIFALREWRAPSTSDPTNAAATATASSGDRHPPPTSSACGAPLKPNGISRSRTTLNATSAVASGSDNVTSTGNSHXXXXXXXXXXXXTGRAGAPQDDCAGAAGRXXXXDDRTRCSDSASAATGDGWTRQILTARRGQRPAVWMDFEEARNILLRWEGYKILTLER 2668
KW W D+ + GGL+KL+ KPSTG GN ++ +R L + + T FMG K S V LS DDE + QW LR F L+FHLTNHYAL+FALREW P P G + +V SG G GAP C RQ+L+ RRGQRP+VW+DF+E R +L+W GY++L + R
Sbjct: 203 KWAWTSDVASYYAVEGGLEKLNREKPSTGFFGNGDVVEGMRML-SDGFDSAACTIAPFMGRLKPSGPSAAEFVKLSPTDDEATRGAQWTALRARFSQPGCALIFHLTNHYALLFALREWHEPL--------------------------------PVGEA----------SVGSG------------------------GSGGAP---CVRV-------------------------VRQVLSTRRGQRPSVWIDFDEMRRTMLKWNGYRVLAVHR 383
BLAST of mRNA_Ecto-sp9_F_contig114.1199.1 vs.
Match: Predicted (protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MSC5_MICPC) HSP 1 Score: 100 bits (248), Expect = 6.870e-18 Identity = 175/596 (29.36%), Postives = 243/596 (40.77%), Query Frame = 2
Query: 491 EADTEEPEDVSDL-----NTLLLPSGALP---------LDVERFSVSYSGALLTGWVKQGSPCCAAASVAGAWNALGGLPRGSRGALNSESVLRAMRAVVQGQVTAMIARFERLLGGSLEPLLQVLDAELALE--GKHLGGRGPRAAAANGPHLLRLTRIVTSRERERVGHSSTFDLLWELYEDERKEAAELXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTAGGLD--PEVSVEGVTSCATQATTVGGEEVSSASQIRTTDGAARKHPQNGHEDADDSGILRRTSSSLSPGTTKITTTPGNHNFPRRPSTGRPRSGGGGASTASECRPGTALRHPVSADDLMLASCVAEGETGQGLGAVRRCWEGGEKDMGGEEQEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIGQGVTPSRLRRSSSFSSTVGEKPASSARXXXXXSSKKDIRGYRRGTRASAGEIHGERTKWRWKRDLCTLLKRIGGLDKLSATKPSTGAIGNLGLISTVRYLVG----------EVPGNVEVTARLFMGKGRRRSCRLPVPLSTRDDEEEKAKQWATLREAFLSDRQVLVFHLTNHYALIFALRE 2194
E+DT EPE+ S ++L P G LP + F+V +GA GWV+Q SP CAAASVAGAWNAL R + A+ + V+ + ++ Q+ ARFERLLG + LDA +A + GK LGGR + G + R+V +E H + E + ++AA XXXXXXXXXXXXXXXXXXXXXXXXXX L P++S G+ + + D + T GA+ ++ PG V D +LAS A E G G K GG+++ + P + P+++A XXXXX ++ ++ + +W W++DLC LLK+ GGL+KL KPSTG GN G+I +R + + P +V+ R+ +G + L V + R DEEE +W LR F D VL+FHL NHYALI+ALRE
Sbjct: 17 ESDTAEPEEASCSWDAFQTSILPPHGRLPSRASSNDRAIPPANFAVHVNGAAWAGWVRQSSPACAAASVAGAWNALAFGGRHASRAVRQDDVVAHLERCLEEQIRQKRARFERLLGAPTDEFEAELDAAIARDPSGKTLGGR---SKIDKGMKRADVMRVVVDVAKE---HGTR--------ELDARDAAVESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSRVPKMSAFGLIAALVREDEARXXXXXXXXXXXXXXXXXXXXXDESANDENAXXXXXET----------------------------------GAAGDAKTAPGA-----VDEDAALLASLAAGIEMNSGRGG---------KGKGGKKKPPSRFAKMNKKFLAGFGGAELAETANDAGGGRVTTHADALPP--------------DHPSAAAXXXXXXXAETEM-------------PPAKPKRWTWRKDLCELLKKRGGLEKLRRDKPSTGEFGNWGIIEAMRRVSAHAALAASEDVDAPPAPQVSVRVAVGAKTKLRKGLDVVVRARGDEEE---EWEKLRALFARDDTVLIFHLKNHYALIYALRE 520 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig114.1199.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig114.1199.1 >prot_Ecto-sp9_F_contig114.1199.1 ID=prot_Ecto-sp9_F_contig114.1199.1|Name=mRNA_Ecto-sp9_F_contig114.1199.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=844bp MDYGGRQQREAWFAAEASPFLSKMVEAMVIERPDNPRAWVAEYIGRDEGTback to top mRNA from alignment at Ecto-sp9_F_contig114:40885..46412- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig114.1199.1 ID=mRNA_Ecto-sp9_F_contig114.1199.1|Name=mRNA_Ecto-sp9_F_contig114.1199.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=5528bp|location=Sequence derived from alignment at Ecto-sp9_F_contig114:40885..46412- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig114:40885..46412- >mRNA_Ecto-sp9_F_contig114.1199.1 ID=mRNA_Ecto-sp9_F_contig114.1199.1|Name=mRNA_Ecto-sp9_F_contig114.1199.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=5064bp|location=Sequence derived from alignment at Ecto-sp9_F_contig114:40885..46412- (Ectocarpus species9 EcSCA_722f female)back to top |