mRNA_Ecto-sp9_F_contig1131.1130.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1131.1130.1 vs.
Match: EsV-1-199 (n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI) HSP 1 Score: 736 bits (1900), Expect = 1.350e-261 Identity = 469/506 (92.69%), Postives = 481/506 (95.06%), Query Frame = 1
Query: 1 MPPPPFTQGWPRGPMNELHLAAMDGSSERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIVDDIGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRLIHANADPLLGNVLPSTGGVCFLPLDVAAHFGHSAVARELLQRLGIERCGGESRGVDALCLAVKGRHVGIVAMLAHAGVVDKGSALAAAAAQGYEASVKFLLRQHEGKHSASGSAYVNKFNRFGLTPLLENINCGHCSARIVRLLVDAGADTTAAYRLTGKKGQAIAATTQVTAMECLLLEKKAKGDKGEQPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPRGQRRAKAPVRLTLPMMRRDTGTRRALLGAVSRYSEKSMYSRGGGGKQQKDPSWSVRAAALALVRGNTGLAFILGVEFVFVLMFGAIAAGWHGTVQALFAKEWMVFLSVLIWVW 1518
MPPPP TQGWPRGPMNELHLAAMDGS+ERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSI+DD+GSDA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NADPLLGNVLPSTGGVCFLPLDVA SAV RELLQRLGIERCGGESRGVDALCLAV GRHVGIVAMLAHAGVVD+GSALAAAAAQGYEASVKFLLRQHEGKHSAS SAYVNK NRFGLTPLLENI CGHCSARIVRLLVDAGADTTAAYRLTGKKGQA+AATT +TAM CLLLEKKAKGD GE+PHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPR QRRA+APVRLTLPM RRDTGTRRALLGAVSRYSEKSMYS+GGGGK QKDPSWSVRAAA+ALVRGNTGLAFILGVEFVFVLMFGAIAAGW GTVQALFAKEW+VFLSVL+WVW
Sbjct: 1 MPPPPPTQGWPRGPMNELHLAAMDGSAERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLGNVLPSTGGVCFLPLDVAXXXXXSAVVRELLQRLGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVDQGSALAAAAAQGYEASVKFLLRQHEGKHSASRSAYVNKLNRFGLTPLLENITCGHCSARIVRLLVDAGADTTAAYRLTGKKGQAMAATTHLTAMGCLLLEKKAKGDTGEEPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPRRQRRAEAPVRLTLPMTRRDTGTRRALLGAVSRYSEKSMYSQGGGGKLQKDPSWSVRAAAVALVRGNTGLAFILGVEFVFVLMFGAIAAGWRGTVQALFAKEWLVFLSVLVWVW 506
BLAST of mRNA_Ecto-sp9_F_contig1131.1130.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 194 bits (494), Expect = 8.770e-52 Identity = 168/431 (38.98%), Postives = 220/431 (51.04%), Query Frame = 1
Query: 13 PFTQGWPRGPMNELHLAAMDGSSERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIVDDIGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI-RLIHANADPLLGNVLPSTGGVCFLPLDVAAHFGHSAVARELLQRLGIERCGGESRGVDALCLAVKGRHVGIVAMLAHAGVVDKGSALAAAAAQGYEASVKFLLRQHEGKHSASGSAYVNKFNRFGLTPLLENINCGHCSARIVRLLVDAGADTTAAYRLTGKKGQAIAATTQVTAMECLLLEKKAKGDKGEQPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPP-RGQRRAKAPVRLTLP----MMRRDTGTRRALLGAVSRYSEK 1287
P Q WP GP N L AA GS + A LL+S D++QG+ G TPLM+A+ G+PR+VR+LLN GA + + D XXXXXXXXXXXXXXXXXXXX + L+ A ADPLL +G FLPLDVAA GH V EL++++GI+ CGG S G +AL A + I+A+L AGVVD G AL AA G EA +KFLL Q G+ S +AY+N N GLT LL+ I C R+V+LLV+AGADTT+ + + G+ T + CLL + AK E+ + L+ RLLL+ EA HA+SW+WP+ + ++ +G R A P M+ R T R+ LL A+ RYS K
Sbjct: 5 PLPQQWPHGPSNPLQAAADCGSFKTAANLLAS-GAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLL-TCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQ--RCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLTMCLLGGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYSSK 431
BLAST of mRNA_Ecto-sp9_F_contig1131.1130.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 193 bits (490), Expect = 1.860e-51 Identity = 232/430 (53.95%), Postives = 282/430 (65.58%), Query Frame = 1
Query: 34 RGPMNELHLAAMDGSSERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIVDDIGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRLIHANADPLLGNVLPSTGGVCFLPLDVAAHFGHSAVARELLQRLGIERCGGESRGVDALCLAVKGRHVGIVAMLAHAGVVDKGSALAAAAAQGYEASVKFLLRQHEGKHSASGSAYVNKFNRFGLTPLLENINCGHCSARIVRLLVDAGADTTAAYRLTGKKGQAIAATTQVTAMECL---LLEKKAKGD--KGEQPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPRGQRRAKA------PVRLTLPMMRRDTGTRRALLGAVSRYSEKS 1290
RGP NELH AA+DGSS+R +LL+ ID++QGD G TPLM A GH V+++LLN GA++ VDD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PLL + S G F+PLD AA GH AVAREL+QR GI C G S GVDAL A +H+ ++A+L AGVVD G+AL A G E ++KFLL Q +G+ +A + + G TPLL + G CS R+VRLLVDAGAD T A R+ G+ +T+ T ++C L EK D +Q NL+A+ RLLLQVE HA SW+W G H+ G++RA+ P++ LP+M R + R A L V R ++K+
Sbjct: 9 RGPRNELHKAALDGSSQRTESLLAG-GRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSS--GNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQ-KGEGTARTTYASTPRDGRGHTPLLSAVTTGPCSPRVVRLLVDAGADATLAVRVPDGFGR----STKYTPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLW--GGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLAKKA 428
BLAST of mRNA_Ecto-sp9_F_contig1131.1130.1 vs.
Match: EsV-1-1 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 190 bits (483), Expect = 1.490e-49 Identity = 160/426 (37.56%), Postives = 216/426 (50.70%), Query Frame = 1
Query: 43 MNELHLAAMDGSSERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIVDDIGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI--RLIHANADPLLGNVLPSTGGVCFLPLDVAAHFGHSAVARELLQRLGIERCGGESRGVDALCLAVKGRHVGIVAMLAHAGVVDKGSALAAAAAQGYEASVKFLLRQHEGKHSASG--SAYVNKFNRFGLTPLLE-NINCGHCSARIVRLLVDAGADTTAAYRLTGKKGQAIAATTQVTAMECLLLEKK--AKGDKGEQPH--NLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPRGQRRAKAP-VRLTLPMMRRDTGTRRALLGAVSRYSEKS 1290
+N+LH A + GS+E A+L+ ++++Q +S G TPLM+A NGH R+ ++L+ GAN+SI D G A XXXXXXXXXXXXX + L+ NA+PLL P G +PLD+AA GH+ V REL+Q LGIE C S G AL A +H+ I+A+L AGVVD G AL AA G+EASVKFLLR H K G AY+N + G TPL+ C + RIVR+LVDAGADTT+ ++ KG + T + A L L KK A G + H L+A RLLL+V+A HA+SW+WP+G+ + R P ++L LP+++R T R L+ + RYS K+
Sbjct: 106 LNQLHRAVLVGSAELTQAVLAG-GTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPP-GNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLR-HRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPL-AFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVKT 527
BLAST of mRNA_Ecto-sp9_F_contig1131.1130.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 186 bits (473), Expect = 5.610e-49 Identity = 197/438 (44.98%), Postives = 248/438 (56.62%), Query Frame = 1
Query: 1 MPPPPFTQGWPRGPMNELHLAAMDGSSERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIVDDIGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRLIH-ANADPLLGNVLPSTGGVCFLPLDVAAHFGHSAVARELLQRLGIERCGGESRGVDALCLAVKGRHVGIVAMLAHAGVVDKGSALAAAAAQGYEASVKFLLRQHEGKHSASGSAYVNKFNRFGLTPLLENINCGHCSARIVRLLVDAGADTTAAYRLTGKKGQAIAATTQVTAMECLLLEKKAKGDKG----EQPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPP-RGQRRAKA-PVRLTLPMM--RRDTGTRRALLGAVSRYSEK 1287
MP P Q PRGP N LH AA GS E +L+S D++QG+ G T LMLA+ G+ R+V ++LN GA +SI XXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX RL+ A ADPLL V P G FLPLD AA GH V EL++++GI+ CGG S GV AL A + +++ I+ +L +AGVVD G AL AA G E +KFLL Q + + +AYVN +R G+TPLL I H R+VRLLV+AGADTT+ + + G + T + + +K +G EQ H L+A RLLL+VEA HA+SW+WP+ ++ R RG R A +TLPM+ RR R+ L A+ RYS K
Sbjct: 1 MPRVPRPQQRPRGPSNRLHAAAECGSFEATATVLAS-GAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTV-PDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQ--HYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434
BLAST of mRNA_Ecto-sp9_F_contig1131.1130.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 184 bits (466), Expect = 3.540e-48 Identity = 193/376 (51.33%), Postives = 230/376 (61.17%), Query Frame = 1
Query: 22 QGWPRGPMNELHLAAMDGSSERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIVDDIGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRLI-HANADPLLGNVLPSTGGVCFLPLDVAAHFGHSAVARELLQRLGIERCGGESRGVDALCLAVKGRHVGIVAMLAHAGVVDKGSALAAAAAQGYEASVKFLLRQHEGKHSASGSAYV---NKFNRFGLTPLLENINCG----HCSARIVRLLVDAGADTTAAYRLTGKKGQAIAATTQVTAMECLLLEKKAKGDKGEQPH--NLQATFRLLLQVEA 1119
Q WPRGP N+LH AA DGS ER +ALL+SR I ++ G G TPLMLA G RVVRILLN GAN+S+V + G A XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A A+PLL PS GV F+PLD AA +G + V REL++++ I+ CGG S GV AL LA ++V ++++LA AGV+D G AL AA + EA VK LL+Q G SA G Y+ + + G TPLL +I+ G CS R+VRLLVDAGADT +A L G GQ + T + C L E G + H L+A RL QVEA
Sbjct: 9 QPWPRGPQNDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPS--GVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGT-SAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAMEKHVHKLRAIHRLFSQVEA 381
BLAST of mRNA_Ecto-sp9_F_contig1131.1130.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 184 bits (466), Expect = 4.250e-48 Identity = 197/387 (50.90%), Postives = 235/387 (60.72%), Query Frame = 1
Query: 43 MNELHLAAMDGSSERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIVDDIGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIR-LIHANADPLLGNV-LPSTGGVCFLPLDVAAHFGHSAVARELLQRLGIERCGGESRGVDALCLAVKGRHVGIVAMLAHAGVVDKGSALAAAAAQGYEASVKFLLRQHEGKHSASGSAYVNKFNRFGLTPLLENIN-CG----HCSARIVRLLVDAGADTTAAYRLTGKKGQAIAATTQVTAMECLLLEKKAKGD--KGEQPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPP 1176
MN LH AA GS+ER LL++ D+NQG TPL+ A + GH V+ ILL+ GAN+SIV D G A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX R L+ ANA+PL+ LP+ LPLD AA G+ V REL+QR+GIE CGG+SRG AL +A +GR V +A+L HAGVVD G AL +A G EASVK+LL+ H KH G AYVN +R G TPLL +I CG R+ RLLV+AGADTT R T G + + T + +L +KK G ++ L+ RLLLQVEA HA SW+WP+ S R P
Sbjct: 1 MNSLHDAAFKGSTERTAELLATGS-WDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLPT-----LLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHA-KHYGPG-AYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRP 379
BLAST of mRNA_Ecto-sp9_F_contig1131.1130.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI) HSP 1 Score: 171 bits (433), Expect = 2.700e-43 Identity = 223/442 (50.45%), Postives = 271/442 (61.31%), Query Frame = 1
Query: 10 PPFTQGWPRGPMNELHLAAMDGSSERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIVDDIGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRLIHANADPLLGNVLPSTGGVCFLPLDVAAHFGHSAVARELLQRLGIERCGGESRGVDALCLAVKGRHVGIVAMLAHAGVVDKGSALAAAAAQGYEASVKFLLRQHEGKHSASGSAYVNK-FNRFGLTPLLENINCG---HCSARIVRLLVDAGADTTAAYRLTGKKGQAIAATTQVT-AMECLLLE---KKAKGDKGEQPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPRGQRRAK-------AP-VRLTLPMMRRDTGTRRALLGAVSRYSEK 1287
PP Q PR +N+LH AA DGS+ A+LS+ ID++ GDS+G TPLM A N HP VV ILL+ GA++S ++D G+ A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A A+PLL V + LPLD AA G V ELLQR GI CGG + GV AL LA H+ ++ L AGVVD G AL A + G+ VKFLL+Q G S SAYV++ + G TPL+ NI+ G CS ++VRLLVDAGADTT+ R T + G T ++ A E L ++ +KA D E L+ RLLL+VEA HA SW+W G V P G + AP +R LP++RR R + ++ RY+ K
Sbjct: 4 PPLLQQSPRVVINKLHEAARDGSTWLTAAILSTGS-IDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNLAWQ---HLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEK-SAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPD--ELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVK 438
BLAST of mRNA_Ecto-sp9_F_contig1131.1130.1 vs.
Match: EsV-1-199 (n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 167 bits (423), Expect = 5.730e-42 Identity = 228/447 (51.01%), Postives = 281/447 (62.86%), Query Frame = 1
Query: 13 PFTQGWPRGPMNELHLAAMDGSSERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIVDDIGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRLIHANADPLLGNVLPSTGGVCFLPLDVAAHFGHSAVARELLQRLGIERCGGESRGVDALCLAVKGRHVGIVAMLAHAG-VVDKGSALAAAAAQGYEASVKFLLRQHEGKHSASGSAYVNKF-NRFGLTPLLENINCGH---CSARIVRLLVDAGADTTAAY---RLTGKKGQAIAATTQVTAMECLLLEKKAKGDKG--EQPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPRGQRRA------------KAPVRLTLPMMRRDTGTRRALLGAVSRYSEK 1287
P Q RGPMN LH AA DGS E A+LSSR D++ G+ + T LM+AT G+ VV LL+ GAN+S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+ A A+PLL + P GV ++PL++AA G+ VARE+++++GI CGG S GV+AL A H+ +A+L AG VVD G AL AA G +VKFLLR+ + A AYVN + +G TP++ ++ G CS +IVRLLVDAGA+TT A R+T + + + T + LL E + G+ EQ L+ T LL + EA HA+SW+W +G PPR + A P+R PM+RR GTR LL + RYS K
Sbjct: 2 PRPQQVTRGPMNALHKAAWDGSVEMTGAILSSRGAPDIDLGNPSAATALMIATVKGYAGVVNALLSKGANVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRAKANPLLCSHTPM--GVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQ----ADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKT--SETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGE-----PPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435
BLAST of mRNA_Ecto-sp9_F_contig1131.1130.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI) HSP 1 Score: 160 bits (405), Expect = 7.450e-40 Identity = 187/433 (43.19%), Postives = 231/433 (53.35%), Query Frame = 1
Query: 13 PFTQGWPRGPMNELHLAAMDGSSERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIVDDIGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRLIH-ANADPLLGNVLPSTGGVCFLPLDVAAHFGHSAVARELLQRLGIERCGGESRGVDALCLAVKGRHVGIVAMLAHAGVVDKGSALAAAAAQGYEASVKFLLRQHEGKHSASGSAYVNKF-NRFGLTPLLENINCGHCSARIVRLLVDAGADTTAAYRLTGKKGQAIAATTQVTAMECLLLEKKAKGDK--GEQPHNLQATFRLLLQVEAAHAISWVWPTGSHSVDRPPRGQRRAK---APVRLTLPMMRRDTGTRRALLGAVSRYSEKS 1290
P + WPRGP NELH AA GS++R A+LSS I++NQGD G TPLM+A+ G+ R+VRIL+ GAN+ IV D+G AXXXXXXXXXXXXXXXXX XXXXXXXXXXXX XXXXXXXXXXXXX A ADPLL + S F+PLD AA G S V RE L +LGI+ CGG SRG AL A K + V +A+LA+AGVVD G AL A + E S+KFLLRQ + + + +G AYV++ + FG TPLL +I D G ++ L E + G EQ H L A RLLL+VEA HA SW+W + + + +R K +P P++ T R ALL AV RYS K+
Sbjct: 4 PAQEKWPRGPKNELHFAADTGSTQRTAAILSS-GLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVSRDR--FVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENREGSIKFLLRQQQLQGNPTG-AYVDEARDPFGRTPLLCSIE-------------DEG------------------------LVDHYLGENRVIGRDITEEQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAHTAEVTKRTKVTPSPRSRMFPVLGLST-RRNALLSAVLRYSSKT 394 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1131.1130.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1131.1130.1 >prot_Ecto-sp9_F_contig1131.1130.1 ID=prot_Ecto-sp9_F_contig1131.1130.1|Name=mRNA_Ecto-sp9_F_contig1131.1130.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=507bp MPPPPFTQGWPRGPMNELHLAAMDGSSERALALLSSRDPIDVNQGDSAGCback to top mRNA from alignment at Ecto-sp9_F_contig1131:16247..19610+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1131.1130.1 ID=mRNA_Ecto-sp9_F_contig1131.1130.1|Name=mRNA_Ecto-sp9_F_contig1131.1130.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3364bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1131:16247..19610+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1131:16247..19610+ >mRNA_Ecto-sp9_F_contig1131.1130.1 ID=mRNA_Ecto-sp9_F_contig1131.1130.1|Name=mRNA_Ecto-sp9_F_contig1131.1130.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3042bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1131:16247..19610+ (Ectocarpus species9 EcSCA_722f female)back to top |