mRNA_Ecto-sp9_F_contig113.1118.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig113.1118.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD28_ECTSI) HSP 1 Score: 949 bits (2452), Expect = 0.000e+0 Identity = 545/595 (91.60%), Postives = 558/595 (93.78%), Query Frame = 3
Query: 651 MGQEVQQGAARLGEGGVLKQLRDAMVKERRPLQFMGCQTRTNASNQCGHLSFIILALAYLETDVLALRASAASGIGLSILFQFYRAQPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEVFAPVELTPVDFVRLMDLAERRVVAKGTRLSEEGQPQEEVFLIVEGAAEVEAESTAVGHLEQKQFVGSMAFNRFMQASASPTTTSPTVPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGVCYXXXXXXXXXXXXXXXXVPGGGGVFEEAKEVALNVLRRDSIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLSRYRDMHGISPEEHQELLKEHEWGEEEFEAGFQKGVTPRDGSKHFLKYEALLQRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVGAKGKAVACLAGRSVAEQPDNTHRVRVPDDAQDDSKDKTLVDSATVVVVRTATGVDAGLEDTDTKKAVVAESEEGEGAGGTADREKREMVESTDQEA 2435
MG EVQQGAARLGEGGVLKQLRDAMVKERRPLQFMGCQT T ASNQCGHLSF+ILALAYLETDVLALRASAASGIGLSILFQFYRAQPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEVFAPVELTPVDFVRLMDLAERR+VAKGT LSEEGQPQEEVFLIVEGAAEVEAES AVGHLEQKQFVGSMAFNRFMQASASPTTTSPTVP XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX VPGGGGVF+EAKEVALNVLRRDSIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKL+RYRDMHGIS EEH+ELLKEHEW +EEFEAGFQKGVTPRDGSKHFL YEALL+RELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVGAKGKA ACLAGRSVAEQPDNTH VRVPDD QDDS DK +VD+AT V+V+TATG LE TDT K VV ESEE EGAGGTAD+EKREMVES DQ+A
Sbjct: 1 MGPEVQQGAARLGEGGVLKQLRDAMVKERRPLQFMGCQTTTTASNQCGHLSFVILALAYLETDVLALRASAASGIGLSILFQFYRAQPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEVFAPVELTPVDFVRLMDLAERRLVAKGTHLSEEGQPQEEVFLIVEGAAEVEAESAAVGHLEQKQFVGSMAFNRFMQASASPTTTSPTVPTDISSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNVPGGGGVFKEAKEVALNVLRRDSIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLTRYRDMHGISSEEHRELLKEHEWTKEEFEAGFQKGVTPRDGSKHFLNYEALLRRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVGAKGKAAACLAGRSVAEQPDNTHPVRVPDDGQDDSTDKRVVDAATAVIVQTATG----LEKTDTNKTVVEESEEREGAGGTADKEKREMVESMDQDA 591
BLAST of mRNA_Ecto-sp9_F_contig113.1118.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTM1_9PHAE) HSP 1 Score: 457 bits (1176), Expect = 4.240e-146 Identity = 263/541 (48.61%), Postives = 331/541 (61.18%), Query Frame = 3
Query: 552 AKSPFHERFCSMAKPP--TGGRRLLRKEAPFSAIAMGQEVQQGAARLGEGGVL----KQLRDAMVKERRPLQFMGCQTRTNASNQCGHLSFIILALAYLETDVLALRASAASGIGLSILFQFYRAQPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEVFAPVELTPVDFVRLMDLAERRVVAKGTRLSEEGQPQEEVFLIVEGAAEVEAESTAVGHLEQKQFVGSMAFNRFMQASASPTTTSPTVPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGVCYXXXXXXXXXXXXXXXXVPGGGGVFEEAKEVALNVLRRDSIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLSRYRDMHGISPEEHQELLKEHEWGEEEFEAGFQKGVTPRDGSKHFLKYEALLQRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVGAKG 2156
A P R S KPP GGR LL K+AP ++ A+GQ+ Q G VL + R M KERRPLQF+G T T + CGH+S IL+L YLETD L+LR +G GL++ F +YR PLWI I WN FL IN ++IG + KEK +A G DPEQAR +Q++F PV+L PV+F++LM A+RRVV +G ++++G+P EE+FLIVEG A+V +E V LE FVGSMAFN F+Q S P + TV Y GG GV + K V ++LR DS+VG++A S V D DR G+ME + TVTAT+DVV YVWD H LRAF+KRRPL GA LQ AIS D + KV+QSRG + +YR+LL E L+GG I EK+KL RYR+ HGI+ EEH +L E W EEEF+ GFQ GV PR GS+HF+KYEAL+QRELAKG+V+ + + L FR AGIDAQEH++AL KQGWT DDYEVG KG
Sbjct: 48 AAKPSAWRQLSTGKPPKLAGGRLLLPKQAPCASSAVGQQQQAEVEIEKYGDVLLLAQESFRKEMTKERRPLQFVGIDTATTIGSVCGHISLGILSLGYLETDALSLRELVVAGSGLNLFFSYYRTPPLWISIKWNLFFLAINAALIGAMWKEKDDAEEFGKDPEQARIYQDIFMPVDLNPVEFMQLMGQAQRRVVLEGNDINQQGRPHEEMFLIVEGTADVRSEGEDVCRLEPGGFVGSMAFNAFIQES--PLASYHTVARGAADALPAGGGAGDGKDQADSVFIEGLVVRDGGYKY----------------GGKGVLDLVKGVIFHMLRGDSVVGNVALSLVPDVV-DRSKDLGEMECAKNTVTATSDVVVYVWDQHALRAFLKRRPLIGAGLQKAISEDFSNKVNQSRGHKTKYRMLLEETLEGGKINQTEKRKLQRYRETHGIALEEHNFILAERGWTEEEFDVGFQPGVAPRQGSQHFVKYEALVQRELAKGEVKPESKLFLLNFRRHAGIDAQEHILALGKQGWTVDDYEVGVKG 569
BLAST of mRNA_Ecto-sp9_F_contig113.1118.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD36_ECTSI) HSP 1 Score: 449 bits (1154), Expect = 3.510e-142 Identity = 253/489 (51.74%), Postives = 322/489 (65.85%), Query Frame = 3
Query: 699 VLKQLRDAMVKERRPLQFMGCQTRTNASNQCGHLSFIILALAYLETDVLALRASAASGIGLSILFQFYRA--QPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEVFAPVELTPVDFVRLMDLAERRVVAKGTRLSEEGQPQEEVFLIVEGAAEVEAESTAVGHLEQKQFVGSMAFNRFMQASASPTTTSPTVPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGVCYXXXXXXXXXXXXXXXXVPGGGGVFEEAKEVALNVLRRD-SIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLSRYRDMHGISPEEHQELLKEHEWGEEEFEAGFQKGVTPRDGSK-HFLKYEALLQRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVGAK 2153
++ L M+K+RRPL+F+G T TNA + CGHLSF IL AYLETDVL LR SG L+I+F +R P+WIPI WN FL +N +M+ LL+ E+ EA +G DPEQAR F+E+F P +L+PV F+RLMD+AERRV+ KG L++EG+P EEVFLIVEG AEV++E V HL FVGSMAFNRF++ + SPT+T E G Y GG+F +A EV L LR+ SIVG + Q+FV D R+ G MERS+ T+TAT+DVVAYVWDMH+LR F+KRRP+ GA+LQ AIS DL KV+QSR +E YR LLAEALDGG +T E++ L RYR H IS EH+E LKEH W EE+FEAGFQ+ P+D SK +FLKYEALL+ EL G+V+ + R +LR+FR++AGIDAQEHL+A+EKQGWTAD+YE+G +
Sbjct: 84 LMDMLHPIMIKDRRPLEFLGISTVTNAGSLCGHLSFAILTAAYLETDVLTLRVLVLSGSTLNIMFNMFRVVGPPVWIPIKWNVGFLALNAAMVWLLMNEREEAEELGKDPEQARIFREIFMPTQLSPVHFLRLMDVAERRVMLKGNDLNQEGRPHEEVFLIVEGTAEVKSEGVVVCHLASGGFVGSMAFNRFIK-TPSPTSTKKA------------------------------GEGGSSYRE------------------GGIFTQAWEVFLYQLRKQGSIVGEVGQTFVGDNTSRRQDKSG-MERSSNTITATSDVVAYVWDMHVLREFVKRRPMIGASLQKAISVDLANKVNQSRDHKEHYRQLLAEALDGGRVTSTERRNLQRYRGGHRISVAEHRERLKEHGWTEEDFEAGFQELAAPKDMSKENFLKYEALLKSELDTGEVKPEARSNLRKFRSQAGIDAQEHLLAIEKQGWTADEYEIGGR 522
BLAST of mRNA_Ecto-sp9_F_contig113.1118.1 vs.
Match: Cyclic (nucleotide-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD37_ECTSI) HSP 1 Score: 416 bits (1069), Expect = 3.110e-132 Identity = 266/590 (45.08%), Postives = 344/590 (58.31%), Query Frame = 3
Query: 435 MISLARVARGRATLKGS--------SSSGAALRWR--GRLGDDCRLVHPAKSPFHERFCSMAKPPTGGRRLLRKEAPFSAIAMGQEVQQGA-ARLGEGGVLKQLRDAMVKERRPLQFMGCQ---TRTNASNQCGHLSFIILALAYLETDVLALRASAASGIGLSILFQFYRA--QPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEVFAPVELTPVDFVRLMDLAERRVVAKGTRLSEEGQPQEEVFLIVEGAAEVEAESTAVGHLEQKQFVGSMAFNRFMQASASPTTTSPTVPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGVCYXXXXXXXXXXXXXXXXVPGGGGVFEEAKEVALNVLRRD-SIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLSRYRDMHGISPEEHQELLKEHEWGEEEFEAGFQKGVTPRDGSKHFLKYEALLQRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVGAK 2153
MIS+ARV+ GR + + S+ A +R G G RL SP S+AKPP + L + FSA+A V ++ +L M++ERRP+ + G + T TNA CGH SF +L LAYLETDVL LR A G L+++F +R P+WIPI WN FLL+N M+ LL+ E+ EA + +DPEQAR + ++F V L+PV F+RLMD+AERRVV KG L + G P +EV LI+EG AEV++E AV H+E+ F+GSMAF R + + S V GG+F +A E L LRRD S+VG +AQ+ V D R+ G +ERS +TVTAT+DVV YVWD H LR FIKRRP+ GA LQ AI+ DL KVDQSR E YR LLAE LDGG +T E+K L RYR+ HGIS +EH + L++++W EEEFEAGFQ GV +++FL+YEALL++ELAKGKV+ D R +LR+FR++ GIDAQEHLIA+EKQGWTADDYE GAK
Sbjct: 1 MISVARVSAGRTASRLARQQRHVVPSARIALVRAEALGLEGSSIRL----NSPASRALVSVAKPP----KQLAEGRTFSAVAPKPMVTMIPWVPPPFQPLMNRLHPIMIRERRPMAWCGIEALNTVTNAGALCGHFSFALLTLAYLETDVLKLRYLVACGSTLNVMFNLFRVVGPPVWIPIKWNAGFLLLNTIMVILLMNERQEADRLKEDPEQARIYHDIFESVNLSPVQFLRLMDVAERRVVPKGANLKDGGAPHKEVILIIEGTAEVKSEGVAVSHMEKGGFIGSMAFMRLSKKLSVAKLAS--------------------------------------------------DDGHYVYKDGGMFRKAWEAVLGQLRRDGSVVGEVAQAVVGDKTLKRQDTMG-LERSMSTVTATSDVVVYVWDQHALREFIKRRPMIGAFLQKAITVDLVNKVDQSRDHHEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISFDEHLDRLRDNKWTEEEFEAGFQMGVA----TQNFLEYEALLRKELAKGKVKPDARSNLRKFRSQVGIDAQEHLIAVEKQGWTADDYEAGAK 527
BLAST of mRNA_Ecto-sp9_F_contig113.1118.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN16_ECTSI) HSP 1 Score: 404 bits (1038), Expect = 2.660e-127 Identity = 238/530 (44.91%), Postives = 311/530 (58.68%), Query Frame = 3
Query: 603 GGRRLLRKEAPFSAIAMGQEVQQGAARLGEGGVLKQLRDA-------MVKERRPLQFMGCQTRTNASNQCGHLSFIILALAYLETDVLALRASAASGIGLSILFQFYRAQPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEVFAPVELTPVDFVRLMDLAERRVVAKGTRLSEEGQPQEEVFLIVEGAAEVEAESTAVGHLEQKQFVGSMAFNRFMQASASPTTTSPTVPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGVCYXXXXXXXXXXXXXXXXVPGGG---GVFEEAKEVALNVLRRDSIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLSRYRDMHGISPEEHQELLKEHEWGEEEFEAGFQKGVTPRDGSKHFLKYEALLQRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVGAKGKA 2162
GG RL + ++ V +G A E +Q+R+A M ER+PL+F G T CGH SF I L YLETD L R +G L + F +YR PL I I W + L++N ++ +L E++EA + +DPE++R F+E+F P +L PV+F+RLMDLA+RRV KG + + G+P E++FLIVEG AEV++E V HLE F+GSMAF RF Q + +P +P V E G V GGG + KE L+ +R+D I+G +A+S V+D G R H MERS TTVTAT+DVV Y WDMH L AF+KRRPL GA+LQ A++ D KV QSRG EERYRLLL E+LD G I PI ++KL RYR+ H IS E H+ LKE W EEE+ GFQ+ PRDGS FL+YEAL+ REL+ G+V + R +LR+FR++A IDAQEHL+A++KQGWTADDYE G KG A
Sbjct: 40 GGSRLAVMKPARASSRQLSAVPKGEAEQAETVFERQVREAKADFKVFMTTERQPLKFAGLNFTTTIGMLCGHASFGIATLVYLETDPLTTRVMVFTGATLGLFFSYYRHPPLIISIKWLTLTLILNSFLLAILWNERAEAEELNNDPEKSRIFEELFMPFDLNPVEFLRLMDLADRRVWMKGNDICQAGRPHEDMFLIVEGTAEVKSEGETVSHLEPGGFIGSMAFQRFTQEAEAPVDVTPEV-----------VRRNTINSSDFVYIDSIILENG-----------------SSVYGGGDGRSTRKIVKEAFLHFMRQDHIIGKVARSLVSDVMGMRVHED-DMERSKTTVTATSDVVTYAWDMHELHAFLKRRPLIGASLQKAMAEDFINKVYQSRGHEERYRLLLVESLDPGSINPIGREKLRRYRETHHISEEVHKGFLKEQGWTEEEYYMGFQQNKAPRDGSARFLEYEALVSRELSGGEVTPEARSNLRKFRSQAHIDAQEHLLAIQKQGWTADDYEAGEKGAA 540
BLAST of mRNA_Ecto-sp9_F_contig113.1118.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD27_ECTSI) HSP 1 Score: 345 bits (884), Expect = 1.640e-105 Identity = 193/395 (48.86%), Postives = 248/395 (62.78%), Query Frame = 3
Query: 984 KEKSEAAHIGDDPEQARTFQEVFAPVELTPVDFVRLMDLAERRVVAKGTRLSEEGQPQEEVFLIVEGAAEVEAESTAVGHLEQKQFVGSMAFNRFMQASASPTTTSPTVPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGVCYXXXXXXXXXXXXXXXXVPGGGGVFEEAKEVALNVLRRDSIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLSRYRDMHGISPEEHQELLKEHEWGEEEFEAGFQKGVTPRDGSKHFLKYEALLQRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVGAKGKAVA 2168
KEK +A G DPEQAR +Q++F PV+L PV+F++LM A+RRVV +G ++++G+P EE+FLIVEG A+V +E V LE FVGSMAFN F+Q + ++ + + G Y GG GV + K+V N+LR DS+VG++A S V D D G+ME + TVTAT+DVV YVWD H LRAFIKRRPL GA LQ AIS D + KV+QSRG + +YR+LL E L+GG I EK+KL RYR+ HGI+ EEH+ +L E W EEEFE GFQ GV PR GS+HF+KYEAL+QRELA+G+V+ + + L FR AGIDAQEH++AL KQGWT DDYEVG KG + A
Sbjct: 3 KEKEDAEEFGKDPEQARIYQDIFMPVDLNPVEFMQLMGQAQRRVVLEGNDINQQGRPHEEMFLIVEGTADVRSEGEDVCRLEPGGFVGSMAFNAFIQEAPVASSHTAARGTADAWPAGGGRSDGKDQADSVFIEGLVVGDGGYKY------------------GGKGVLDLVKDVIFNMLRGDSVVGNVALSLVPDVV-DGPKDLGKMECTKNTVTATSDVVVYVWDQHALRAFIKRRPLIGAGLQKAISEDFSNKVNQSRGHKTKYRMLLEETLEGGEINQTEKRKLQRYRETHGIALEEHKFMLSERGWTEEEFEVGFQPGVAPRQGSQHFVKYEALVQRELAQGEVKPESKLYLLNFRKHAGIDAQEHILALGKQGWTVDDYEVGVKGMSSA 378
BLAST of mRNA_Ecto-sp9_F_contig113.1118.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD39_ECTSI) HSP 1 Score: 298 bits (762), Expect = 6.020e-88 Identity = 174/353 (49.29%), Postives = 218/353 (61.76%), Query Frame = 3
Query: 1092 MDLAERRVVAKGTRLSEEGQPQEEVFLIVEGAAEVEAESTAVGHLEQKQFVGSMAFNRFMQASASPTTTSPTVPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGVCYXXXXXXXXXXXXXXXXVPGGGGVFEEAKEVALNVLRRD-SIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLSRYRDMHGISPEEHQELLKEHEWGEEEFEAGFQKGVTPRDGSKHFLKYEALLQRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVG 2147
MD AERRV+ KG L +EG+P EEVFLIVEG AEV +E AV HL+ FVGSMAFNRF++ TT +P V GG+F +A + L LR+ S+VG + QS V D + R+ +ERS TTVTA++DVV YVWD H LR FIKRRP+ GA LQ AIS DL KV QSR +E YR LLAE LDGG +T E+K L RYR+ HGIS EH E LKE+ W +EF+AGF++GV P+D S++FLKYEALL++ELAKG++ + + +LR+FR++ GIDAQEHLIA+EKQGWTAD+YE G
Sbjct: 1 MDAAERRVMLKGNDLIQEGRPHEEVFLIVEGQAEVRSEGVAVSHLQSGGFVGSMAFNRFIKK----TTANP----------------------------------------------HSDREGHYVYNDGGMFRKAWQAILAQLRKQGSVVGEVTQSIVGDQKSKRQEKSA-LERSTTTVTASSDVVVYVWDQHALREFIKRRPMIGACLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRYREGHGISMAEHFERLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRKELAKGELNPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAG 302
BLAST of mRNA_Ecto-sp9_F_contig113.1118.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD23_9STRA) HSP 1 Score: 283 bits (723), Expect = 1.020e-81 Identity = 181/488 (37.09%), Postives = 253/488 (51.84%), Query Frame = 3
Query: 768 RTNASNQCGHLSFIILALAYLETDVLALRASAASGIGLSILFQFYRAQPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEVFAPVELTPVDFVRLMDLAERRVVAKGTRLSEEGQPQEEVFLIVEGAAEVEA-ESTAVGHLEQKQFVGSMAFNRFMQASASPTTTSPTVPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGVCYXXXXXXXXXXXXXXXXVPGGGGVFEEAKEVALNVLRRDSIVGSMAQSFV--ADAEGDRRHGGGQMERSAT---------------------TVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEER---YRLLLAEALDGGVITPIEKKKLSRYRDMHGISPEEHQELLKEHEWGEEEFEAGFQ-KGVTPRDGSKHFLKYEALLQRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVG 2147
+TN SN CGH SF++LAL Y+E+DVL LR +A GI LS+LFQ+YR QPLWIPI WN +FLLIN MI LL+ E+ +A + D E+ F ++FA + L+ V+F+ L+ LAER + GT L+ +PQ++V+LI++G AEV+ + +GH+ QFVGSMAF RF+ E +E + R +V S+ + D E G + +AT V ATT+ Y WD HLLRA++KR PL G A+Q ISADLTRK+DQSR P R YR LL AL GG + P EK+KL R+R+ H I+ EH +L + W + ++E G+Q K +T F YE +LQ+EL G + +DGR LR +R+++ I+ Q+HL+A+ K GWT + YE+G
Sbjct: 25 KTNWSNLCGHGSFLMLALGYMESDVLLLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTIFLLINGGMIALLVNERRQATRL-DSTEERELFDQMFAKLGLSAVEFLHLIRLAERETLPAGTTLATFNEPQDKVYLIIDGTAEVQGGDGDLIGHISNFQFVGSMAFLRFLN-------------------------------------------------------------------------EVQEHERDRNRERQVVSSLLAALANELDPEHWEIEPDGTVVATATMAVDPHMPHSLHPFSWCVCMYAVRATTECHVYAWDFHLLRAYLKRHPLEGNAMQVTISADLTRKLDQSRDPHIRQVEYRQLLLTALSGGELLPTEKRKLQRFRENHDITLAEHDAMLAQLGWTKPDYETGYQQKAITAS-----FAAYERMLQQELRGGTLNEDGRARLRRYRSQSNINPQQHLLAIAKLGWTYEQYEMG 433
BLAST of mRNA_Ecto-sp9_F_contig113.1118.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW21_9PHAE) HSP 1 Score: 285 bits (728), Expect = 5.980e-81 Identity = 187/447 (41.83%), Postives = 238/447 (53.24%), Query Frame = 3
Query: 1026 QARTFQEVFAPVELTPVDFVRLMDLAERRVVAKGTRLSEEGQPQEEVFLIVEGAAEVEAESTAVGHLEQKQFVGSMAFNRFMQASASPTTTSPTVPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGVCYXXXXXXXXXXXXXXXXVPGGGGVFEEAKEVALNVLRRD-SIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLSR-----------------------YRDMHGISPEEHQELLKEHEWGEEEFEAGFQKGVTPRDGSKHFLKYEALLQRELAKGKV--------------------------------------------EDD-----GRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVG 2147
QAR ++E+F V+L+PV F+RLMD AERRVV KG L ++G+P EE+FLIVEG AEV +E AV HL+ FVGSMAFNRF++ TT++P V GG+F +A E L LR+ S+VG + QS V D + R+ +ERS TTVTAT+D+V YVWD H LR FIKRRP+ GA+LQ AIS DL KV QSR +E YR LLAE LDGG +T E+K L R YR+ HGIS EH + LKE+ W +EF+AGF++GV P+D S++FLKYEALL+ ELAKG+ +DD + +LR+FR++ GIDAQEHLIA+EKQGWTAD+YE G
Sbjct: 51 QARIYREIFERVQLSPVHFLRLMDAAERRVVLKGNDLIQDGRPHEEMFLIVEGQAEVRSEGVAVSHLQSGGFVGSMAFNRFIKK----TTSNPHADREGHY----------------------------------------------VYKDGGMFRKAWEAILAQLRKQGSVVGEVTQSIVGDQKSKRQEKSA-LERSTTTVTATSDMVVYVWDQHALREFIKRRPMIGASLQKAISVDLVNKVVQSRDHKEHYRQLLAETLDGGRVTSTERKNLQRWVKGRKDGGKVSLLGGCTCDGRWYREGHGISMAEHFQRLKENNWTHKEFQAGFREGVAPKDLSENFLKYEALLRNELAKGEYHFCAFFFCCVFVIASSCCNEPPRSPSYRQFASCLVLVSFSPNGFDDDQLNPEAKSNLRKFRSQKGIDAQEHLIAVEKQGWTADEYEAG 446
BLAST of mRNA_Ecto-sp9_F_contig113.1118.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLU4_9STRA) HSP 1 Score: 270 bits (691), Expect = 3.930e-76 Identity = 187/529 (35.35%), Postives = 260/529 (49.15%), Query Frame = 3
Query: 720 AMVKERRPLQFMGCQT------RTNASNQCGHLSFIILALAYLETDVLALRASAASGIGLSILFQFYRAQPLWIPIGWNGVFLLINVSMIGLLLKEKSEAAHIGDDPEQARTFQEVFAPVELTPVDFVRLMDLAERRVVAKGTRLSEEGQPQEEVFLIVEGAAEVEA--------------------------ESTAVGHLE------------------QKQFVGSMAFNRFMQASASPTTTSPTVPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPGVCYXXXXXXXXXXXXXXXXVPGGGGVFEEAKEVALNVLRRDSIVGSMAQSFVADAEGDRRHGGGQMERSATTVTATTDVVAYVWDMHLLRAFIKRRPLAGAALQNAISADLTRKVDQSRGPEERYRLLLAEALDGGVITPIEKKKLSRYRDMHGISPEEHQELLKEHEWGEEEFEAGFQ-KGVTPRDGSKHFLKYEALLQRELAKGKVEDDGRQSLREFRTRAGIDAQEHLIALEKQGWTADDYEVGAK 2153
AMVKER + T TN SN CGH SF++LAL Y+E+DV+ LR +A GI LS+LFQ+YR QPLWIPI WN +FLLIN MI L+ E+ +A H+ DD E+ ++E+F + L+ V+ + +M LAE++++ GT ++ GQP ++ +LI +G + STA + QFVGSMAF RF+ TV + E G GGV + V ++A A E ++ + S+TTV TT+ + WD HLLRA++K PL G A+Q ISADLTRK+DQSR P RYR LL AL GG + P EK KL YR+ HGI+ EEH+E+L + W ++ G+Q K +T F YE LL +EL G++ ++GR LR FR+++ IDA +HL+AL K GWT + YE+G +
Sbjct: 51 AMVKERVLTLPLALSTLPPLSLTTNFSNICGHGSFLMLALGYMESDVMMLRVFSAGGIVLSVLFQYYRPQPLWIPISWNTLFLLINGGMIAALISERRKADHL-DDAEERAVYEEMFCKLGLSAVELMHVMRLAEQQILPAGTTIAACGQPLDKPYLITDGTVGLXXXXXXXXXVTDHDGDPISSLACSSRLQSSTAXXXXXXXXXXXXXXXXXXXXXXTRHQFVGSMAFLRFLN----------TVHDHERDRDNERAVLNSLLAALAAELDPEHWE-------IDPDGRVVAVAAPHGEGQGGVQAGXXXXXXXXXXQQQGVAAVAAGEAAQ-EDEQEESEESLCISSTTVRTTTECRVFAWDFHLLRAYLKTHPLEGNAMQVTISADLTRKLDQSRDPHIRYRQLLLTALGGGEVLPCEKNKLQHYREAHGITTEEHEEMLLDLGWTRSDYTTGYQRKAITSA-----FAAYEDLLHQELKNGRLNEEGRARLRRFRSQSNIDATKHLLALAKLGWTYEQYEMGTQ 555 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig113.1118.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig113.1118.1 >prot_Ecto-sp9_F_contig113.1118.1 ID=prot_Ecto-sp9_F_contig113.1118.1|Name=mRNA_Ecto-sp9_F_contig113.1118.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=668bp MISLARVARGRATLKGSSSSGAALRWRGRLGDDCRLVHPAKSPFHERFCSback to top mRNA from alignment at Ecto-sp9_F_contig113:9130..18499+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig113.1118.1 ID=mRNA_Ecto-sp9_F_contig113.1118.1|Name=mRNA_Ecto-sp9_F_contig113.1118.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=9370bp|location=Sequence derived from alignment at Ecto-sp9_F_contig113:9130..18499+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig113:9130..18499+ >mRNA_Ecto-sp9_F_contig113.1118.1 ID=mRNA_Ecto-sp9_F_contig113.1118.1|Name=mRNA_Ecto-sp9_F_contig113.1118.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=4008bp|location=Sequence derived from alignment at Ecto-sp9_F_contig113:9130..18499+ (Ectocarpus species9 EcSCA_722f female)back to top |