mRNA_Ecto-sp9_F_contig1128.1099.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1128.1099.1 vs.
Match: Hypothetical (leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPC8_ECTSI) HSP 1 Score: 191 bits (485), Expect = 2.370e-55 Identity = 101/110 (91.82%), Postives = 102/110 (92.73%), Query Frame = 1
Query: 16 KGSLLAFTFLHTLTLGNNRIGNLQASLGVLRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSARRARVPKSWEASARGAHSDSVRLTQDLAAEE 345
KGSLLAFTFLHTLTLG ASLG+LRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSARRARVPKSWEASARGAHSDSVRLTQDLAAEE
Sbjct: 43 KGSLLAFTFLHTLTLGXXXXXXXXASLGILRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSARRARVPKSWEASARGAHSDSVRLTQDLAAEE 152
BLAST of mRNA_Ecto-sp9_F_contig1128.1099.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDM7_AURAN) HSP 1 Score: 72.8 bits (177), Expect = 5.290e-14 Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 1
Query: 13 EKGSLLAFTFLHTLTLGNNRIGNLQASLGVLRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSARR 258
E S+ + L L +NR+ +L+ + +L+ +R L+ L+L NPLAEET YRL VIK +PWLE LD KIT EER+ A++
Sbjct: 56 EGSSVGRLLHVEELILNDNRLEDLKTHVDILQRLRRLKRLDLYNNPLAEETSYRLHVIKAMPWLEVLDQMKITPEERAKAKK 137
BLAST of mRNA_Ecto-sp9_F_contig1128.1099.1 vs.
Match: Hypothetical (protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QKS1_DUNTE) HSP 1 Score: 74.3 bits (181), Expect = 3.380e-13 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 1
Query: 16 KGSLLAFTFLHTLTLGNNRIGNLQASLGVLRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSAR 255
KG LL F FL L L NN + NL + L ++L+ L L+GNP EE YR++VI N+P L+ LD+H +T+ ER AR
Sbjct: 93 KGCLLTFKFLEVLDLSNNLLRNLDKIIATLSKFKYLKNLNLTGNPCIEEPDYRMIVIYNIPSLQILDLHMVTDTERQKAR 172
BLAST of mRNA_Ecto-sp9_F_contig1128.1099.1 vs.
Match: Uncharacterized (protein n=1 Tax=Trypanosoma theileri TaxID=67003 RepID=A0A1X0NZK7_9TRYP) HSP 1 Score: 64.3 bits (155), Expect = 1.310e-9 Identity = 38/84 (45.24%), Postives = 50/84 (59.52%), Query Frame = 1
Query: 43 LHTLTLGNNRIGNLQASLGVLRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSA------RRARVPKS 276
L LTL +NR+GNL+A L+ +R LR L+L GNPL +E GYRL +I P +E LD + EER +A R R P+S
Sbjct: 257 LEVLTLAHNRLGNLRAVSARLKPLRWLRELDLRGNPLCDEVGYRLFLIHEHPNIEILDRRAVRPEERKAAAEMYGSNRTRTPQS 340
BLAST of mRNA_Ecto-sp9_F_contig1128.1099.1 vs.
Match: Putative (leucine-rich repeat-containing protein 72-like n=1 Tax=Trypanosoma conorhini TaxID=83891 RepID=A0A3R7LAG9_9TRYP) HSP 1 Score: 63.5 bits (153), Expect = 2.420e-9 Identity = 34/70 (48.57%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 43 LHTLTLGNNRIGNLQASLGVLRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSA 252
L L L +NR+ NL A L+L+R LR L+L GNPL +E GYRL +I P LE LD + +EER A
Sbjct: 211 LEVLFLAHNRLSNLSAVSAQLKLLRCLRELDLRGNPLCDEVGYRLFLIHEHPHLEVLDRRVVRDEERKEA 280
BLAST of mRNA_Ecto-sp9_F_contig1128.1099.1 vs.
Match: putative (leucine-rich repeat-containing protein 72-like n=1 Tax=Trypanosoma grayi TaxID=71804 RepID=UPI0004F499B1) HSP 1 Score: 62.4 bits (150), Expect = 6.090e-9 Identity = 34/70 (48.57%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 43 LHTLTLGNNRIGNLQASLGVLRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSA 252
L L L NNR+ NL A L+ +R LR L+L GNPL +E GYRL +I LP LE LD + +ER A
Sbjct: 189 LEVLALANNRLSNLTAVSTQLKPLRCLRELDLRGNPLCDEVGYRLFLIYELPQLEVLDRRAVRYDERKEA 258
BLAST of mRNA_Ecto-sp9_F_contig1128.1099.1 vs.
Match: Uncharacterized (protein n=1 Tax=Trypanosoma cruzi marinkellei TaxID=85056 RepID=K2N8P0_TRYCR) HSP 1 Score: 60.5 bits (145), Expect = 2.910e-8 Identity = 33/70 (47.14%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 43 LHTLTLGNNRIGNLQASLGVLRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSA 252
L L L +NR+ NL A LR ++ LR L+L GNPL +E GYRL +I P LE LD + +EER A
Sbjct: 199 LEVLFLAHNRLSNLNAVSAQLRPLKCLRELDLRGNPLCDEEGYRLFLIHEHPHLEVLDRRVVRDEERKEA 268
BLAST of mRNA_Ecto-sp9_F_contig1128.1099.1 vs.
Match: Putative (leucine-rich repeat-containing protein 72-like n=1 Tax=Trypanosoma rangeli TaxID=5698 RepID=A0A3R7MEW6_TRYRA) HSP 1 Score: 58.5 bits (140), Expect = 1.370e-7 Identity = 32/70 (45.71%), Postives = 42/70 (60.00%), Query Frame = 1
Query: 43 LHTLTLGNNRIGNLQASLGVLRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSA 252
L L L +NR+ +L A L+ +R LR L+L GNPL +E GYRL +I P LE LD + +EER A
Sbjct: 198 LEVLFLAHNRLSDLSAVSAQLKPLRCLRELDLRGNPLCDEVGYRLFLIYEHPHLEVLDRRVVRDEERKEA 267
BLAST of mRNA_Ecto-sp9_F_contig1128.1099.1 vs.
Match: Uncharacterized (protein n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1IMK0_LEPSE) HSP 1 Score: 57.4 bits (137), Expect = 3.530e-7 Identity = 30/70 (42.86%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 43 LHTLTLGNNRIGNLQASLGVLRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSA 252
L L+L +N + +L + LR +RHLRYL+L GNP+ +E YR I LP +E LD +T++ER A
Sbjct: 184 LEHLSLAHNELTDLDCIMQPLRRLRHLRYLDLRGNPIVDEPSYRQRCIVALPQVEVLDGLTVTQDERRDA 253
BLAST of mRNA_Ecto-sp9_F_contig1128.1099.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2YA28_CIOSA) HSP 1 Score: 55.8 bits (133), Expect = 7.680e-7 Identity = 33/84 (39.29%), Postives = 45/84 (53.57%), Query Frame = 1
Query: 19 GSLLAFTFLHTLTLGNNRIGNLQASLGVLRLMRHLRYLELSGNPLAEETGYRLLVIKNLPWLETLDMHKITEEERSSARRARVP 270
G L +L L L N++ NL A L + + LR L L NP+A E+GYRLLVI +LP + LD +T ER ++ P
Sbjct: 88 GCLSHLRYLQVLMLQKNQLVNLNAVLHEISPLHALRVLNLFDNPVAHESGYRLLVIHSLPSVALLDREAVTSNERKRSKAIHEP 171 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1128.1099.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1128.1099.1 >prot_Ecto-sp9_F_contig1128.1099.1 ID=prot_Ecto-sp9_F_contig1128.1099.1|Name=mRNA_Ecto-sp9_F_contig1128.1099.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=116bp MVRFEKGSLLAFTFLHTLTLGNNRIGNLQASLGVLRLMRHLRYLELSGNPback to top mRNA from alignment at Ecto-sp9_F_contig1128:8802..9788+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1128.1099.1 ID=mRNA_Ecto-sp9_F_contig1128.1099.1|Name=mRNA_Ecto-sp9_F_contig1128.1099.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=987bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1128:8802..9788+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1128:8802..9788+ >mRNA_Ecto-sp9_F_contig1128.1099.1 ID=mRNA_Ecto-sp9_F_contig1128.1099.1|Name=mRNA_Ecto-sp9_F_contig1128.1099.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=696bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1128:8802..9788+ (Ectocarpus species9 EcSCA_722f female)back to top |