mRNA_Ecto-sp9_F_contig11268.1088.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig11268.1088.1 vs.
Match: Ubiquitin-like (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUS9_9PHAE) HSP 1 Score: 377 bits (968), Expect = 2.450e-121 Identity = 183/189 (96.83%), Postives = 183/189 (96.83%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKAAVFKPQDEEPFAPNNPR--CVGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHDMV 561
QRIFFRGGELRNPHTLQD GIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQK AVFKPQDEEPFAPNNPR GGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHDMV
Sbjct: 62 QRIFFRGGELRNPHTLQDYGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKVAVFKPQDEEPFAPNNPREAMQGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHDMV 250
BLAST of mRNA_Ecto-sp9_F_contig11268.1088.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXN5_HETAK) HSP 1 Score: 186 bits (473), Expect = 9.950e-55 Identity = 100/190 (52.63%), Postives = 121/190 (63.68%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKAAVFKPQDEEPFAPNNPR-----CVGGLGGGTVSMRPGIGAGESYVREVAAYILDDR--NLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVR 549
QR+F+RG ELRN HTL CG++RD QTV LA +P+ P PR L+R L Q +R L+ PEL +EGTGGTYFL+DA ++ FKP DEEPF PNNPR GG GG +SMRPG+ AGE+Y+REVAAY+LD L GVP T L A+H AF Y D + R K+GSFQ FVR
Sbjct: 62 QRLFYRGRELRNAHTLATCGLFRDRQTVVLAVAPEPGDALLPLARPLNE--NCPRDLARTLTQAQRALELNIVPELAMEGTGGTYFLKDARKRPLGAFKPGDEEPFMPNNPRGFEPGSAGGAGGEALSMRPGVRAGEAYLREVAAYLLDQSWGGLAGVPATALALAQHSAFRYADGRVRPKVGSFQAFVR 249
BLAST of mRNA_Ecto-sp9_F_contig11268.1088.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H589_9STRA) HSP 1 Score: 177 bits (448), Expect = 2.990e-51 Identity = 91/187 (48.66%), Postives = 123/187 (65.78%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKAAVFKPQDEEPFAPNNPRCVGGLGGGT-----VSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFV 546
QR+F+RG ELRN H+LQDCGIY++G+T+ L+ P + LE + G + P+SLSR + Q KR + +G P L ++G GGTYF+ ++ + A FKP+DEEPF NNPR G + ++MR GI G++Y+REVAAYILD R+ GVP TTLVE ++ FCY D + KLGSFQ FV
Sbjct: 56 QRLFYRGRELRNQHSLQDCGIYQNGETLTLSVRPNTLHNLNFYLETY-GTFKCPKSLSRAIIQSKRAMHKGLTPSLAMDGAGGTYFIPNSMGKYVACFKPRDEEPFTINNPRGQAWSGVTSSDQEELTMRKGIRPGDAYIREVAAYILDTRSFTGVPETTLVECENAKFCYNDKRPVPKLGSFQAFV 241
BLAST of mRNA_Ecto-sp9_F_contig11268.1088.1 vs.
Match: Ubiquitin-like (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDH3_9STRA) HSP 1 Score: 172 bits (435), Expect = 3.540e-46 Identity = 98/201 (48.76%), Postives = 121/201 (60.20%), Query Frame = 1
Query: 40 HTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELP--RSLSRVLGQVKRGLDRGFK-PELTLEGTGGTYFLQDAARQKAAVFKPQDEEPFAPNNPRC---------VGGLGGG-----TVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYW---------DHKERK-KLGSFQEFVRHDMV 561
H+LQDCGI RDG+T+Y +P + + ++ G LP R L R L QV+R +D G P+LT+EG GGTYFL D R+ AVFKP DEEP+AP NPR VGG GGG MRPG+ GE YVREVAAY+LD GVP T +V+A+HPAF Y+ D +E K+GSFQE+VRHD V
Sbjct: 170 HSLQDCGIVRDGETIYFTIAPPSSLDRDRAVPILRPYGLLPPPRRLGRALKQVRRAMDMGVNGPKLTVEGFGGTYFLYDPRRRPLAVFKPSDEEPYAPRNPRGPELVADWGKVGGGGGGKGRVEVFQMRPGVTPGEGYVREVAAYLLDHEGFAGVPETIMVQARHPAFHYFPSSVSSGGNDGQEGSVKVGSFQEYVRHDYV 370
BLAST of mRNA_Ecto-sp9_F_contig11268.1088.1 vs.
Match: Phosphatidylinositol (3-/4-kinase, catalytic domain protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCJ9_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.060e-45 Identity = 98/201 (48.76%), Postives = 121/201 (60.20%), Query Frame = 1
Query: 40 HTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAGELP--RSLSRVLGQVKRGLDRGFK-PELTLEGTGGTYFLQDAARQKAAVFKPQDEEPFAPNNPRC---------VGGLGG--GTVS---MRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYW---------DHKERK-KLGSFQEFVRHDMV 561
H+LQDCGI RDG+T+Y +P + + ++ G LP R L R L QV+R +D G P+LT+EG GGTYFL D R+ AVFKP DEEP+AP NPR VGG GG G V MRPG+ GE YVREVAA++LD GVP T +V+A+HPAF Y D +E K+GSFQE+VRHD V
Sbjct: 170 HSLQDCGIVRDGETIYFTIAPPSSLDRDRAVPILRPYGLLPPPRRLGRALKQVRRAMDMGVNGPKLTVEGFGGTYFLYDPRRRPLAVFKPSDEEPYAPRNPRGPELVADWGKVGGRGGDKGRVEVFQMRPGVTPGEGYVREVAAFLLDHEGFAGVPETIMVQARHPAFHYLPSSVCSGGNDGQEGSVKVGSFQEYVRHDYV 370
BLAST of mRNA_Ecto-sp9_F_contig11268.1088.1 vs.
Match: Phosphatidylinositol (kinase (PIK-F) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQN6_9STRA) HSP 1 Score: 160 bits (406), Expect = 5.740e-43 Identity = 86/190 (45.26%), Postives = 119/190 (62.63%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYL--ASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKAAVFKPQDEEPFAPNNPR-CVGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHDMV 561
Q++F++G EL N L CGIY+D V+L +++ + + Y++ P+ G P+++ + +GL G PEL ++GTGGTYFL+D ++K FKPQ+EEPFAP NPR V LG R G+ +GE+ REVAAY+LD + GVP TTL E KHPAF Y + + K+GS QEFVRHD V
Sbjct: 126 QQLFYKGTELSNVRNLVQCGIYQDKVVVHLVLSANARKKRANMYTIHPY-GNHVFPKTIMKAAHLAMQGLALGLVPELAMDGTGGTYFLKDPTQRKVCCFKPQNEEPFAPMNPRGFVAALG--ESGFRKGVLSGEACEREVAAYLLDKDHFAGVPATTLTEIKHPAFRYGEGEVVYKMGSLQEFVRHDDV 312
BLAST of mRNA_Ecto-sp9_F_contig11268.1088.1 vs.
Match: Phosphatidylinositol (kinase (PIK-F) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZYF3_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.080e-42 Identity = 86/189 (45.50%), Postives = 118/189 (62.43%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYL--ASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKAAVFKPQDEEPFAPNNPRCVGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHDMV 561
Q++F++G EL N L CGIY+D V+L +++ + + Y++ P+ G P+++ + + +GL GF PEL ++GTGGTYFL+D ++K FKPQDEEPFAP NPR G G R + +GE+ REVAAY+LD + GVP TTL E KHPAF Y + K+GS QEFVRHD V
Sbjct: 542 QQLFYKGSELNNVRNLVQCGIYQDKVVVHLVLSANARKKHNNLYTIHPY-GNHMFPKTIMKAVHLAMQGLAMGFAPELAMDGTGGTYFLKDPTQRKVCCFKPQDEEPFAPMNPRGFVGDALGVPGFRKYVLSGEACEREVAAYLLDKDHFAGVPTTTLTEIKHPAFRYKG-EVVYKMGSLQEFVRHDDV 728
BLAST of mRNA_Ecto-sp9_F_contig11268.1088.1 vs.
Match: Ubiquitin-like (domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QV05_SAPDV) HSP 1 Score: 159 bits (402), Expect = 1.720e-42 Identity = 85/190 (44.74%), Postives = 118/190 (62.11%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYL--ASSPQDEMGKPYSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKAAVFKPQDEEPFAPNNPR-CVGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERKKLGSFQEFVRHDMV 561
Q+++F+G EL N L CGIY+D V+L +++ + + +++ P+ G P+++ + +GL G PEL ++GTGGTYFL+D ++K FKPQ+EEPFAP NPR V LG R G+ +GE+ REVAAY LD + GVP TTL E KHPAF Y + + K+GS QEFVRHD V
Sbjct: 114 QQLYFKGTELNNVRNLMQCGIYQDKVVVHLVVSANARKKQKNVFTIHPY-GNHVFPKTIMKAAHLAMQGLALGLVPELAMDGTGGTYFLKDPTQRKVCCFKPQNEEPFAPMNPRGFVAALG--ESGFRKGVLSGEACEREVAAYFLDKDHFAGVPATTLTEIKHPAFRYGEAEVVYKMGSLQEFVRHDDV 300
BLAST of mRNA_Ecto-sp9_F_contig11268.1088.1 vs.
Match: Ubiquitin-like (domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GT12_9STRA) HSP 1 Score: 155 bits (391), Expect = 9.440e-42 Identity = 87/191 (45.55%), Postives = 114/191 (59.69%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKP--YSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKAAVFKPQDEEPFAPNNPR-CVGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERK-KLGSFQEFVRHDMV 561
Q+++++G EL NP L CG+Y D V L S + +++ P+ G PRS+ + +GL GF PEL ++GTGGTYFL+D A++K FKPQ+EEPF P NPR VG LG R G+ +GE+ REVAA++LD + VP TTL E KHPAF D K+GS QEFVRHD V
Sbjct: 74 QQLYYKGTELANPRNLVQCGLYADKVVVDLVLSANGRQNRANMFTIHPY-GNHVFPRSIMKAAHLAMQGLALGFTPELAMDGTGGTYFLKDPAQRKIVCFKPQNEEPFGPCNPRGFVGSLG--EAGFRKGVLSGEACEREVAAFLLDKDHFASVPATTLAEIKHPAFKNSDSGNVVYKMGSLQEFVRHDDV 261
BLAST of mRNA_Ecto-sp9_F_contig11268.1088.1 vs.
Match: Ubiquitin-like (domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GQZ4_9STRA) HSP 1 Score: 155 bits (391), Expect = 5.880e-41 Identity = 87/191 (45.55%), Postives = 114/191 (59.69%), Query Frame = 1
Query: 1 QRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKP--YSLEPFLGAGELPRSLSRVLGQVKRGLDRGFKPELTLEGTGGTYFLQDAARQKAAVFKPQDEEPFAPNNPR-CVGGLGGGTVSMRPGIGAGESYVREVAAYILDDRNLHGVPPTTLVEAKHPAFCYWDHKERK-KLGSFQEFVRHDMV 561
Q+++++G EL NP L CG+Y D V L S + +++ P+ G PRS+ + +GL GF PEL ++GTGGTYFL+D A++K FKPQ+EEPF P NPR VG LG R G+ +GE+ REVAA++LD + VP TTL E KHPAF D K+GS QEFVRHD V
Sbjct: 74 QQLYYKGTELANPRNLVQCGLYADKVVVDLVLSANGRQNRANMFTIHPY-GNHVFPRSIMKAAHLAMQGLALGFTPELAMDGTGGTYFLKDPAQRKIVCFKPQNEEPFGPCNPRGFVGSLG--EAGFRKGVLSGEACEREVAAFLLDKDHFASVPATTLAEIKHPAFKNSDSGNVVYKMGSLQEFVRHDDV 261 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11268.1088.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig11268.1088.1 >prot_Ecto-sp9_F_contig11268.1088.1 ID=prot_Ecto-sp9_F_contig11268.1088.1|Name=mRNA_Ecto-sp9_F_contig11268.1088.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=187bp QRIFFRGGELRNPHTLQDCGIYRDGQTVYLASSPQDEMGKPYSLEPFLGAback to top mRNA from alignment at Ecto-sp9_F_contig11268:833..2492- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig11268.1088.1 ID=mRNA_Ecto-sp9_F_contig11268.1088.1|Name=mRNA_Ecto-sp9_F_contig11268.1088.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1660bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11268:833..2492- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11268:833..2492- >mRNA_Ecto-sp9_F_contig11268.1088.1 ID=mRNA_Ecto-sp9_F_contig11268.1088.1|Name=mRNA_Ecto-sp9_F_contig11268.1088.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1122bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11268:833..2492- (Ectocarpus species9 EcSCA_722f female)back to top |