mRNA_Ecto-sp9_F_contig11248.1074.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig11248.1074.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE8_ECTSI) HSP 1 Score: 299 bits (765), Expect = 3.100e-102 Identity = 138/159 (86.79%), Postives = 151/159 (94.97%), Query Frame = 1
Query: 1 QLCELTCLGSTHFATQYGRECWCGSAGVDYALHGESTDCTYARAGDADQTCGGFDAANVYSYTDENTPTSSFVGCYQDESDARIMALALTDSSSMTMEMCEAECTGNTYFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAVSVYTY 477
+LCELTCLGST+FATQYGRECWCGSAG+DYALHGESTDCTY AG+ADQTCGGFDAANVY YT+E+TPTSSFVGCYQDESDAR+M LALTDSSSMT EMCEAECTGN YFGMQYG ECFCGGSST+LLE+GESSAC+YECPGDS+Q CGGFYA+SVY+Y
Sbjct: 4 ELCELTCLGSTYFATQYGRECWCGSAGMDYALHGESTDCTYGCAGNADQTCGGFDAANVYRYTNESTPTSSFVGCYQDESDARMMELALTDSSSMTKEMCEAECTGNRYFGMQYGSECFCGGSSTNLLENGESSACDYECPGDSEQECGGFYAMSVYSY 162
BLAST of mRNA_Ecto-sp9_F_contig11248.1074.1 vs.
Match: WSC (domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD7_ECTSI) HSP 1 Score: 306 bits (785), Expect = 5.540e-102 Identity = 142/160 (88.75%), Postives = 153/160 (95.62%), Query Frame = 1
Query: 1 QLCELTCLGSTHFATQYGRECWCGSAGVDYALHGESTDCTYARAGDADQTCGGFDAANVYSYTDENTPTSSFVGCYQDESDARIMALALTDSSSMTMEMCEAECTGNTYFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAVSVYTYS 480
+LCELTCLGST+FATQYGRECWCGSA +DYALHGESTDCTYA AGDADQTCGGFDAANVYSYTDE+T S+FVGCYQDES +RIM LALTDSSSM+MEMCEA+C GNTYFG+QYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYA+SVY+YS
Sbjct: 232 ELCELTCLGSTYFATQYGRECWCGSADMDYALHGESTDCTYACAGDADQTCGGFDAANVYSYTDESTAISAFVGCYQDESGSRIMELALTDSSSMSMEMCEAKCRGNTYFGLQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAMSVYSYS 391
BLAST of mRNA_Ecto-sp9_F_contig11248.1074.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUE6_ECTSI) HSP 1 Score: 317 bits (811), Expect = 4.920e-101 Identity = 147/160 (91.88%), Postives = 155/160 (96.88%), Query Frame = 1
Query: 1 QLCELTCLGSTHFATQYGRECWCGSAGVDYALHGESTDCTYARAGDADQTCGGFDAANVYSYTDENTPTSSFVGCYQDESDARIMALALTDSSSMTMEMCEAECTGNTYFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAVSVYTYS 480
+LCE TCLG+T+FATQYGRECWCGSAGV+YALHGESTDCTYA AGDADQTCGGFDAANVY YTDE+TPTSSFVGCYQDESDARIM LALTDSSSMT EMCEAECTGNT+FGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYA+SVY+YS
Sbjct: 659 ELCEQTCLGNTYFATQYGRECWCGSAGVEYALHGESTDCTYACAGDADQTCGGFDAANVYRYTDESTPTSSFVGCYQDESDARIMELALTDSSSMTKEMCEAECTGNTFFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAMSVYSYS 818
BLAST of mRNA_Ecto-sp9_F_contig11248.1074.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL0_ECTSI) HSP 1 Score: 286 bits (731), Expect = 2.350e-95 Identity = 133/160 (83.12%), Postives = 146/160 (91.25%), Query Frame = 1
Query: 1 QLCELTCLGSTHFATQYGRECWCGSAGVDYALHGESTDCTYARAGDADQTCGGFDAANVYSYTDENTPTSSFVGCYQDESDARIMALALTDSSSMTMEMCEAECTGNTYFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAVSVYTYS 480
+LCELTCLGST+FATQYGRECWCGS G DYALHGEST+CTY +GDADQ CGGFDAANVY +T E T TSS VGCYQDESDARIM ALTD+SSMTMEMCEAEC+GNTYFGMQYG ECFCGG STDLL+HGES+AC+YECPGDS+QVCGGFYA+SVY+YS
Sbjct: 121 ELCELTCLGSTYFATQYGRECWCGSDGADYALHGESTECTYPCSGDADQLCGGFDAANVYLFTGE-TSTSSLVGCYQDESDARIMEFALTDTSSMTMEMCEAECSGNTYFGMQYGTECFCGGESTDLLQHGESTACDYECPGDSEQVCGGFYAMSVYSYS 279
BLAST of mRNA_Ecto-sp9_F_contig11248.1074.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS2_ECTSI) HSP 1 Score: 293 bits (750), Expect = 4.070e-95 Identity = 137/161 (85.09%), Postives = 149/161 (92.55%), Query Frame = 1
Query: 1 QLCELTCLGSTHFATQYGRECWCGSAGVDYALHGESTDCTYARAGDADQTCGGFDAANVYSYT-DENTPTSSFVGCYQDESDARIMALALTDSSSMTMEMCEAECTGNTYFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAVSVYTYS 480
+LCE TCLG+T FATQYGRECWCGSAG DY LHGESTDCTYA AGDADQTCGGFDAANVY YT D+ TS+FVGCYQDESDARIM LALTDSSSMT EMCEAECTG+TYFGMQYGRECFCGGSSTDLL+HGES+AC+YECPGDSD++CGGFYA+SVY+YS
Sbjct: 354 ELCEQTCLGNTFFATQYGRECWCGSAGADYTLHGESTDCTYACAGDADQTCGGFDAANVYLYTGDDALSTSTFVGCYQDESDARIMELALTDSSSMTKEMCEAECTGSTYFGMQYGRECFCGGSSTDLLQHGESTACDYECPGDSDELCGGFYAMSVYSYS 514
BLAST of mRNA_Ecto-sp9_F_contig11248.1074.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRS1_ECTSI) HSP 1 Score: 296 bits (757), Expect = 3.260e-92 Identity = 138/161 (85.71%), Postives = 149/161 (92.55%), Query Frame = 1
Query: 1 QLCELTCLGSTHFATQYGRECWCGSAGVDYALHGESTDCTYARAGDADQTCGGFDAANVYSYTDENTPT-SSFVGCYQDESDARIMALALTDSSSMTMEMCEAECTGNTYFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAVSVYTYS 480
+LCE TCLG+T+FATQYGRECWCGSAG DY LHGES DCTYA AGDADQTCGGFDAANVY YT ++ PT SSFVGCYQDESDARIM LALTDSSSMT E CEAECTGNTYFGMQYGRECFCGGSSTDLL+HGES++C+YECPGDSDQVCGGFYA+SVY+YS
Sbjct: 769 ELCEQTCLGNTYFATQYGRECWCGSAGADYILHGESADCTYACAGDADQTCGGFDAANVYLYTGDDVPTTSSFVGCYQDESDARIMELALTDSSSMTKERCEAECTGNTYFGMQYGRECFCGGSSTDLLQHGESTSCDYECPGDSDQVCGGFYAMSVYSYS 929
BLAST of mRNA_Ecto-sp9_F_contig11248.1074.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNS1_ECTSI) HSP 1 Score: 228 bits (581), Expect = 1.290e-71 Identity = 106/161 (65.84%), Postives = 127/161 (78.88%), Query Frame = 1
Query: 1 QLCELTCLGSTHFATQYGRECWCGSAGVDYALHGESTDCTYARAGDADQTCGGFDAANVYSY-TDENTPTSSFVGCYQDESDARIMALALTDSSSMTMEMCEAECTGNTYFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAVSVYTYS 480
+LCELTC GS +F+TQYGRECWCG AG DY HGEST+CTY G+ D+TCGGF AA+VY+Y T E TPT S+VGC+QD+ D RIM LALT+SSSMT E+CE C G++YF QYGREC+CG + TD +HGES+ C YECPG+ D+ CGGFYA SVY YS
Sbjct: 153 ELCELTCAGSYYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYSTVEPTPTFSYVGCFQDDQD-RIMELALTESSSMTTELCELTCAGSSYFSTQYGRECWCGPAGTDYEKHGESTECTYECPGNPDETCGGFYAASVYAYS 312
BLAST of mRNA_Ecto-sp9_F_contig11248.1074.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD8_ECTSI) HSP 1 Score: 231 bits (588), Expect = 2.500e-71 Identity = 108/116 (93.10%), Postives = 112/116 (96.55%), Query Frame = 1
Query: 133 GDADQTCGGFDAANVYSYTDENTPTSSFVGCYQDESDARIMALALTDSSSMTMEMCEAECTGNTYFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAVSVYTYS 480
GDADQTCGGFDAANVY YTD N PTSSFVGCYQDESDARIM LALTDSSSMTME+CEAECTGNTYFG+QYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYA+SVY+YS
Sbjct: 352 GDADQTCGGFDAANVYQYTDGNAPTSSFVGCYQDESDARIMELALTDSSSMTMEICEAECTGNTYFGLQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAMSVYSYS 467
BLAST of mRNA_Ecto-sp9_F_contig11248.1074.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK9_ECTSI) HSP 1 Score: 212 bits (539), Expect = 4.060e-64 Identity = 100/169 (59.17%), Postives = 119/169 (70.41%), Query Frame = 1
Query: 1 QLCELTCLGSTHFATQYGRECWCGSAGVDYALHGESTDCTYARAGDADQTCGGFDAANVYSYTDENTPT----------SSFVGCYQDESDARIMALALTDSSSMTMEMCEAECTGNTYFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAVSVYTY 477
+LCELTC+GST+FATQY RECWCGSA DYALHGEST CTYA +GD QTCGGF+AANVY Y D++TP+ S +GCY D+ + RIM + SSMT E+CE C G+TYF QYGREC+CG + D HGES+ C Y C GD+DQ CGGF A +VY Y
Sbjct: 225 ELCELTCVGSTYFATQYRRECWCGSADADYALHGESTGCTYACSGDTSQTCGGFNAANVYLYPDDSTPSPTPSPIQEGPSPALGCYADDPEDRIMDDLVLSDSSMTTELCELTCEGSTYFATQYGRECWCGSAGADYALHGESTDCTYACSGDTDQTCGGFDAANVYRY 393
BLAST of mRNA_Ecto-sp9_F_contig11248.1074.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX48_9PHAE) HSP 1 Score: 186 bits (472), Expect = 4.110e-52 Identity = 88/151 (58.28%), Postives = 104/151 (68.87%), Query Frame = 1
Query: 58 ECWCGSAGVDYALHGESTDCTYARAGDADQTCGGFDAANVYSYTDENTPT--------SSFV--GCYQDESDARIMALALTDSSSMTMEMCEAECTGNTYFGMQYGRECFCGGSSTDLLEHGESSACNYECPGDSDQVCGGFYAVSVYTYS 480
ECWCGSAG DYA+HGESTDCTYA +GD DQTCGGFDAANVY Y D +TP +SFV GCY+D+ + RIM + SMT E+CE C GNTYF QYG EC+CG + D HGES+ C Y C GD+DQ CGG+ A +VY Y+
Sbjct: 409 ECWCGSAGADYAVHGESTDCTYACSGDTDQTCGGFDAANVYRYPDGSTPNPTPSPTEAASFVALGCYEDDREDRIMDELVLSDPSMTTELCELTCLGNTYFATQYGSECWCGSAGADYAVHGESTICTYACSGDADQTCGGYDAANVYRYT 559 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11248.1074.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig11248.1074.1 >prot_Ecto-sp9_F_contig11248.1074.1 ID=prot_Ecto-sp9_F_contig11248.1074.1|Name=mRNA_Ecto-sp9_F_contig11248.1074.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=161bp QLCELTCLGSTHFATQYGRECWCGSAGVDYALHGESTDCTYARAGDADQTback to top mRNA from alignment at Ecto-sp9_F_contig11248:1034..3044- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig11248.1074.1 ID=mRNA_Ecto-sp9_F_contig11248.1074.1|Name=mRNA_Ecto-sp9_F_contig11248.1074.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2011bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11248:1034..3044- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11248:1034..3044- >mRNA_Ecto-sp9_F_contig11248.1074.1 ID=mRNA_Ecto-sp9_F_contig11248.1074.1|Name=mRNA_Ecto-sp9_F_contig11248.1074.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=966bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11248:1034..3044- (Ectocarpus species9 EcSCA_722f female)back to top |