mRNA_Ecto-sp9_F_contig1122.1054.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1122.1054.1 vs.
Match: ABC (transporter, ATP-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB1_ECTSI) HSP 1 Score: 853 bits (2203), Expect = 1.720e-306 Identity = 455/478 (95.19%), Postives = 457/478 (95.61%), Query Frame = 1
Query: 217 MQSSPAVDDEVASPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQACAAMERAEAKVIEDPMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQARISIATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTNQIELKGASFGWGDSPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTNMQTTIERNDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILVSL 1650
MQSSPAVDDEVA+PTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQA AAMERAEAKVIEDPMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQA TKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTNQIELKGASFGWGD+PPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQ DLAQDLPQDAIALELVLDRVREHDTTVSDEQARTIL SL
Sbjct: 1 MQSSPAVDDEVANPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQAHAAMERAEAKVIEDPMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQA-----TKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTNQIELKGASFGWGDAPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQ--------------DLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILGSL 459
BLAST of mRNA_Ecto-sp9_F_contig1122.1054.1 vs.
Match: ABC (transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z5_9STRA) HSP 1 Score: 479 bits (1234), Expect = 1.050e-159 Identity = 279/532 (52.44%), Postives = 348/532 (65.41%), Query Frame = 1
Query: 256 PTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQACAAMERAEAKVIE---------------------------------DPMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEP-----------------------TNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQARISIATKASAAQSRVKMLQKMEANAT--PLPEGKSSFRAKMRLPTPPACHTNQIELKGASFGWGDSPPTATGVNLKLEKGQT---------LAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTNMQTTIERNDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILVSL 1650
P FG TGGAM+VL + ++ +GDTEL+ +DL+VMPGDRVGLVGQNGAGKSTLL IAG R +EG VVK GAR+GYL Q VSGS+RTV+EEA S+MD IN A AA+E A+A E + + KAL+ L + A YEAVGG TQD+ VA++L GLGF +D + C+ FSGGWQMRIALA++LLS+ +LLLLDEP TNHLD+AAKTWLG+++S Y+GT+V VSHDEA +E I+ +T+AEVAN ++EVFK CG+KK+LFERDER+R +K+E EQ+EMAR+Q +DRFGA+ A A R K L KM A A+ P + +A+MRLP PP+CH +QI LK A++GWG PT GV+LKL KGQ L ILGPNGAGKST L+A+AG+LPL +G R EGEGL +GVFTQ DLAQDLPQDA+ALE VL +VRE+DTT+SDEQAR +L L
Sbjct: 24 PNFGETGGAMIVLEKALLVRGDTELIRGMDLSVMPGDRVGLVGQNGAGKSTLLGAIAGVRRAEEGKIVVKNGARVGYLVQTAVSGSTRTVWEEAASQMDKINDARAAIEAAKAGAAEARVEVDXXXXXXXXXXXXXXXXXXXXARVEADTEGADTKALEEFLDSMAVYEAVGGYTQDKTVAEVLTGLGFEPEDYEAPCTEFSGGWQMRIALARMLLSDSELLLLDEPRAGMLFSDSEXXXXLDEPVNALSTNHLDSAAKTWLGKYVSTYEGTVVVVSHDEAFMEAIRCTTIAEVANCKLEVFK-CGYKKYLFERDERVRLALAKFEREQEEMARMQTVIDRFGAKT-----MGAKMAADRQKKLDKMAAAASDDPTELKRKVMKARMRLPAPPSCHKDQITLKDAAYGWGGDAPTVAGVDLKLLKGQVALALCLPGRLVILGPNGAGKSTTLRAIAGLLPLQSGSRVEGEGLNMGVFTQ--------------DLAQDLPQDAVALEHVLHKVREYDTTISDEQARNVLGGL 535
BLAST of mRNA_Ecto-sp9_F_contig1122.1054.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VZ41_9CRYP) HSP 1 Score: 366 bits (939), Expect = 8.010e-118 Identity = 208/466 (44.64%), Postives = 294/466 (63.09%), Query Frame = 1
Query: 253 SPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQACAAMERAEAKVIEDPMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQARISIATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTNQIELKGASFGWGDSPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTNMQTTIERNDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILVSL 1650
+PT+G TGGAM+++ V +G +LMS VD ++ GDRVGLVG NGAGKS+LL AG P+ G+ +VK G MGYL Q VSGS RT ++EA S+M +N+A ++ A + + ++ +AL+R+ AQ + A GG D +A +L GLGFS +D + CS FSGGWQM+IALA+LLLSEPDLL LDEPTNHLDAAAK WL F++ Y+GT+V VSH+ +LL G L++V EV +++ +F+G + KFL ER+ER++ E+ +L+ ++ RFGA+A + A++AQS+ K L ++E P R P PP C + + L GA+FGW + +G +L++EKG + ILGPNG GKSTLL AL+G LPL AGER+ + L +G+FTQ DLAQ+LP D AL +VL+ + D + E+AR ++ +L
Sbjct: 29 NPTYGETGGAMLLMKDVTVQRGPRDLMSGVDWRLVSGDRVGLVGPNGAGKSSLLSAAAGRIPVI-GTVLVKPGVSMGYLIQTAVSGSKRTAWQEAGSQMHRVNRAQRELDEATSAIEGGDISDEALNRMTDAQEAFGAAGGYDIDSKIAAVLQGLGFSQEDYSKSCSDFSGGWQMKIALARLLLSEPDLLFLDEPTNHLDAAAKAWLSSFIAGYEGTVVIVSHEASLLRGAALTSVVEVRDEKAHMFRG-SYDKFLVEREERVQXXXXXXXXXXXEIEKLEDYITRFGAKA-----SHAASAQSKKKALDRIERVEMPTEISSQQGRPSFSFPRPPVCEASMLSLSGATFGW-NGEAMYSGTDLEIEKGMRMCILGPNGCGKSTLLSALSGRLPLLAGERRVSDQLDMGLFTQ--------------DLAQELPLDREALSVVLEHAQRKDPGIISERARAVMGAL 472
BLAST of mRNA_Ecto-sp9_F_contig1122.1054.1 vs.
Match: Hypothetical (protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JYL6_GUITH) HSP 1 Score: 373 bits (957), Expect = 1.420e-117 Identity = 214/482 (44.40%), Postives = 302/482 (62.66%), Query Frame = 1
Query: 211 LRMQSSPAVDDEVASPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQACAAMERAEAKVIEDPMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQARISIATKASAAQSRVKMLQKMEANATP--LPEGKSSFRAKMRLPTPPACHTNQIELKGASFGWGDSPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTNMQTTIERNDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILVSL 1650
L MQ++ + +P FG TGGA++ + + +S G +++ + M GDR+G+VG NGAGKSTLL I R D G V+K +GYL Q VSGS R+ ++EA S M+ I A + +A+ V + M+++A + L AQA +EAVGG ++D+ VA++L GLGF +D + C+ FSGGWQMRIALA+LLLSEPDLLLLDEPTNHLD +AK WL +L Y+GTI+ V+H+ +LL+GI +T+ EV ++R+ VFK C KFL ER R+ A YEA+Q+E+ +LQ ++DRFGA+A +KAS R K L+KME P L G+ R K+ LP PP C + +K A GW + P ++L + +G + ILGPNG GKSTLL ALAG LPL G R +GL +G+FTQ DLAQ+L + AL++V++ V+E D +++ E+AR + +L
Sbjct: 57 LSMQTTQEKASKAINPIFGDTGGAILAVEKLSLSAGPRDILLDASFKAMQGDRIGVVGANGAGKSTLLSAIVRTRAWDSGEAVIKPETTVGYLIQTAVSGSKRSAWDEASSGMNKIMAAEERLLKAQEAVEREAMSERAANELASAQAEFEAVGGSSKDQKVARVLNGLGFQREDHNKSCTEFSGGWQMRIALARLLLSEPDLLLLDEPTNHLDMSAKQWLVSYLKEYKGTIMVVTHETSLLDGIACNTILEVRDKRLHVFK-CSHSKFLLERQARVDAAAKAYEAQQREIEKLQSYIDRFGAKA-----SKASXXXXRKKQLEKMEVIDAPESLQTGR---RPKLVLPEPPKCRMEMVVMKDAEIGWSEEKPLYRDLSLSITRGMRVVILGPNGCGKSTLLWALAGRLPLIKGSRTTTDGLSLGLFTQ--------------DLAQELDPSSTALDVVMETVQEVDPSINTEKARAAMGAL 515
BLAST of mRNA_Ecto-sp9_F_contig1122.1054.1 vs.
Match: Atp-binding (cassette superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQL6_9STRA) HSP 1 Score: 373 bits (958), Expect = 1.570e-117 Identity = 231/476 (48.53%), Postives = 299/476 (62.82%), Query Frame = 1
Query: 232 AVDDEVASPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQACAAMERAEAKVIEDPMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQARISIATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTNQIELKGASFGWGDSPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAG---ERKEGEGLKIGVFTQASKLTNMQTTIERNDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILVSL 1650
AV V +P +G T GA + L+ V+ G T+L+S V+ + G+RVG+VG NGAGKST+L IAG+ +EGS V A +GYL Q VSGS+R + EEA S+M + A A+ AEA+V DP + L L +AQA + GG +R V IL GLGF D R C+ FSGGWQMRIALA+LLL EP LLLLDEPTNHLD+AAK WL FLS Y GT++ VSH+E LL + +TVAE+ Q +E+++ CG+ +FL +R+ER AL++ + KE AR+Q F+DRFGA+A T ASAA SR K L+KM PL GK R +R P PP ++L+ ASFG+ + P V+ L +G + +LGPNG GKST+LKAL G LP G ER GEGL++GVFTQ DLAQDLPQ+ IAL+ VL VR+ D +VSD+QAR L +L
Sbjct: 52 AVTTNVPTPNYGDTQGAELFLDGIAVAAGATQLVSGVNWKINKGERVGIVGGNGAGKSTVLSVIAGHNLPEEGSIRVHPRATLGYLVQTAVSGSARPLIEEAMSQMTAFHAAQKAVAEAEARVTRDPSDANLLS-LERAQAEWIEAGGEDVERRVGNILNGLGFQRSDYPRPCTDFSGGWQMRIALARLLLGEPSLLLLDEPTNHLDSAAKEWLMHFLSGYTGTVLLVSHEEELLRAFQCTTVAELRFQALELYR-CGYDQFLAQREERAEALEAAAARQAKERARVQAFIDRFGAKA-----TMASAANSRKKTLEKMAIIEAPLAAGK---RPHLRFPPPPKVMPELVKLQNASFGYPPAQPLVKEVDFTLTRGTRMVLLGPNGCGKSTVLKALTGSLPALNGASSERILGEGLEMGVFTQ--------------DLAQDLPQEHIALDYVLSTVRQKDLSVSDQQARGALGAL 503
BLAST of mRNA_Ecto-sp9_F_contig1122.1054.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZLM2_9STRA) HSP 1 Score: 353 bits (906), Expect = 4.120e-111 Identity = 217/483 (44.93%), Postives = 305/483 (63.15%), Query Frame = 1
Query: 229 PAVDDEVASPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQACAAMERAEAKVIED-PMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQARISIATKASAAQSRVKMLQKM--EANATPLPEGKSSFRAKMRLPTPPACHTNQ---IELKGASFGWGDS-PPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILP--LSAGERKEGEGLKIGVFTQASKLTNMQTTIERNDLAQDLPQDAIALELVLDRVR---EHDTTVSDEQARTIL 1641
P E G T GA + L +S+G T L++N++ ++ P +R G+VG NGAGKSTLL I G MDEG +V + R+GYL+Q VSGS++TV EEA SEM I +A +E A KV+ED +++ALD+L AQ +E +GG Q+++V +L GLGF +D RLCS FSGGWQMRIALA+LLLS+P LLLLDEP+NHLD++AK WLG+++++Y G++V VSHD +LL+ + ++++AE+A V ++ C + K+L E++ R + +++YE +E ARLQ FVD+FGA A TKA +AQSRVKML+KM E P P + L PP N +++K A+ G+ S PP +NLK+ +G L + GPNGAGKSTLLKAL G +P + +GER E + L +G FTQ DLAQ+L D+ A++LV D R + + V+DE AR +L
Sbjct: 46 PTEAAETFGTVVGDTRGAALRLENVAISRGATPLLNNINWSIQPNERWGIVGINGAGKSTLLGAITGTVRMDEGKALVHSNVRVGYLRQSAVSGSTKTVAEEARSEMTHIEEAKIELEAA-TKVVEDGDYSEEALDKLATAQEHFETIGGYQQEQMVDSVLKGLGFEPEDSDRLCSDFSGGWQMRIALARLLLSKPSLLLLDEPSNHLDSSAKDWLGKYIASYDGSVVLVSHDVSLLD-VSVNSIAEIAGNTVVEYRSCSYNKYLEEKEFRAASAQAEYERNLEEAARLQAFVDKFGASA-----TKAKSAQSRVKMLEKMKKEGKLDPPPVAVVARERDPELVLPPPPKPNGEYLMKMKDATIGYDPSEPPLLKNINLKIPRGMKLLLRGPNGAGKSTLLKALRGNVPEMIQSGERVENDRLFLGTFTQ--------------DLAQELDPDSRAVDLVTDYARSGSDGNIRVTDEAARGVL 507
BLAST of mRNA_Ecto-sp9_F_contig1122.1054.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YWJ6_9STRA) HSP 1 Score: 350 bits (898), Expect = 4.990e-110 Identity = 215/487 (44.15%), Postives = 306/487 (62.83%), Query Frame = 1
Query: 217 MQSSPAVDDEVASPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQACAAMERAEAKVIED-PMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQARISIATKASAAQSRVKMLQKM--EANATPLPEGKSSFRA--KMRLPTPPACH-TNQIELKGASFGWG-DSPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILP--LSAGERKEGEGLKIGVFTQASKLTNMQTTIERNDLAQDLPQDAIALELVLDRVREH---DTTVSDEQARTIL 1641
+++ P +EV T G T GA + L +S+G + L+ N++ +V P +R G+VG NGAGKSTLL I G MD G +V+ R+GYL+Q VSGS++TVYEEA SEM I +A A +ER KV+ED +++ALD+L AQ +E +GG Q+++V +L GLGF +D +LCS FSGGWQMRIALA+LLLS+P LLLLDEP+NHLD+AA+ WLG++++ Y G++V VSHD L++ ++ +AE+ + ++ C +K++L E++ R + +++YE +E A LQ F+D+F A TK+ +AQSRVKML+KM E P P S ++ LP PP H N + +K A G+ + P +NL + +G L + GPNGAGKSTLLKAL G +P + G R E + LK+GVFTQ DLAQ+L +DA A++LV RE D TVSDE+AR ++
Sbjct: 42 VEAPPTEVEEVYGTTIGDTKGAALRLTNVAISRGASSLLKNIEWSVQPKERWGIVGINGAGKSTLLGAITGTVRMDSGQALVQRNERVGYLRQSAVSGSTKTVYEEARSEMTYIEEARAELERT-TKVVEDGDYSEEALDKLADAQEKFEVMGGYEQEQMVESVLKGLGFEPEDSDKLCSDFSGGWQMRIALARLLLSKPSLLLLDEPSNHLDSAARDWLGKYVAKYDGSVVLVSHDVGLMDA-SVNNIAEITAGTLIEYRSCTYKRYLEEKEFRALSAQAEYEKNLEEAANLQKFIDKFSA------GTKSKSAQSRVKMLEKMKKEGKLDPPPVAVVSVARIPQLTLPPPPKPHGENLLVVKNAVIGYDPNEEPLLKNINLTIPRGMKLLLRGPNGAGKSTLLKALRGNVPEMIQEGARIENDKLKLGVFTQ--------------DLAQELDKDARAVDLVTSYAREGADGDITVSDEKARNVM 506
BLAST of mRNA_Ecto-sp9_F_contig1122.1054.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1ELZ7_HEMAN) HSP 1 Score: 350 bits (897), Expect = 3.280e-109 Identity = 206/466 (44.21%), Postives = 286/466 (61.37%), Query Frame = 1
Query: 253 SPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQACAAMERAEAKVIEDPMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQARISIATKASAAQSRVKMLQKMEANATPLPEGKSSFRAKMRLPTPPACHTNQIELKGASFGWGDSPPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTNMQTTIERNDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILVSL 1650
+PTFG TGGAM+++N VS+G +LMS V+ +M GDRVGLVG NGAGKS+LL AG P+ GS +VK G MGYL Q VSGS ++ +EEA S+M I +A ++ A + + ++ +AL+ + +AQ + A GG D +A +L GLGF +D + C FSGGWQM+IALA+LLLSEPDLL LDEPTNHLD+AAK WL RF++ Y+GT+V VSH+ +LL G L+ V EV ++R F+G + KFL ER+ER+ + ++ RFGA+A + A++AQS+ K L ++E P +S R K P PP C T + L A+FGW + +++++EKG + ILGPNG GKSTLL AL+G L L +G RK E L +G+FTQ DLAQ+LP D AL +VL+ + D + E+AR ++ +L
Sbjct: 118 NPTFGETGGAMLLMNDVTVSRGPRDLMSGVNWRLMSGDRVGLVGPNGAGKSSLLSAAAGNIPV-MGSVLVKPGVSMGYLIQTAVSGSKKSAWEEAGSQMHRIKRAEKELDVATKAIEDGDISDEALNLMTEAQEAFGAAGGYDVDAKIASVLQGLGFEKEDYHKSCQDFSGGWQMKIALARLLLSEPDLLFLDEPTNHLDSAAKAWLSRFIAEYEGTVVIVSHEVSLLRGAALTHVIEVRDERAHQFRG-SYSKFLVEREERVXXXXXXXXXXXXXXXXXEDYITRFGAKA-----SHAASAQSKKKALDRIERVELPSEISPTSGRPKFSFPRPPVCETAMLSLSKATFGWNNEA-IYKDMDIEIEKGMRMCILGPNGCGKSTLLSALSGRLNLMSGTRKVSEQLDMGLFTQ--------------DLAQELPLDREALAVVLEHAQRKDPNIISERARAVMGAL 561
BLAST of mRNA_Ecto-sp9_F_contig1122.1054.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WPU3_9CHLO) HSP 1 Score: 351 bits (900), Expect = 1.650e-108 Identity = 228/492 (46.34%), Postives = 295/492 (59.96%), Query Frame = 1
Query: 250 ASPTF--GYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQACAAMERAEAKVIE--DPMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPD----------LLLLDEPTNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQARISIATKASAAQSRVKMLQKMEANATPLPEGKSSF------RAKMRLPTPPACHTNQIELKGASFGWGDSP-----PTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILPLSAGERKEGEGLKIGVFTQASKLTNMQTTIERNDLAQDLPQDAIALELVLDRVREHDTTVSDEQARTILVSL 1650
+SPT G T GA +V++ V GD +L+ V VMPG+RVGLVG NGAGKSTLL+C+ G R +D G VV MGYL+Q VSGS RTV+EEA S M + +A +E A K +E DPM A + L QA YEA GG T D+ +A +L GLGFS + CS FSGGWQMRIALA+LLLS LLLLDEPTNHLD+AA WLG FL GT + VSHDE LL+ + EV +++ F G +KKFL +R ER L ++ +A+ E+ARLQ FVDRFGA+A +KA+ AQSRVK++ K++ +P SS + ++LP PACHT I +KG GWG P P ++L +++GQ + +LGPNGAGKSTLLK L+G LPL G RK G+G+K+ VF+Q DLAQDLP + ALE V + R+ D ++ E+ R L +L
Sbjct: 64 SSPTITRGDTAGATMVVDDVWVQVGDRDLLEGVSWRVMPGNRVGLVGANGAGKSTLLRCLTGVRQVDAGRLVVAHKVEMGYLEQTAVSGSDRTVWEEARSRMTELLKAEEMLESA-GKAMEQGDPM---AGELLTQANDAYEAAGGPTADKKIANVLTGLGFSFAQYDKKCSEFSGGWQMRIALARLLLSPAGQSATSNGGGGLLLLDEPTNHLDSAAIRWLGSFLKASSGTFIIVSHDEQLLQEA-CDHIVEVRGKKLHQFTG-SYKKFLEQRAERDAQLTAQAQAQADEIARLQVFVDRFGAKA-----SKATQAQSRVKLIDKLKEQQVDVPVASSSAGPGDAKKVTLKLPRAPACHTEVIMVKGGEVGWGSRPSPDTAPLIGNIDLTVKRGQRILVLGPNGAGKSTLLKGLSGTLPLWGGSRKVGDGVKMSVFSQ--------------DLAQDLPLEKTALEYVEEMARKEDPGITLEKCRQALGAL 530
BLAST of mRNA_Ecto-sp9_F_contig1122.1054.1 vs.
Match: p-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FAP8_9STRA) HSP 1 Score: 347 bits (889), Expect = 1.990e-108 Identity = 212/483 (43.89%), Postives = 304/483 (62.94%), Query Frame = 1
Query: 229 PAVDDEVASPTFGYTGGAMVVLNQCVVSQGDTELMSNVDLTVMPGDRVGLVGQNGAGKSTLLQCIAGYRPMDEGSCVVKTGARMGYLQQKGVSGSSRTVYEEACSEMDTINQACAAMERAEAKVIED-PMNQKALDRLLQAQATYEAVGGLTQDRLVAQILGGLGFSAQDQQRLCSTFSGGWQMRIALAKLLLSEPDLLLLDEPTNHLDAAAKTWLGRFLSNYQGTIVTVSHDEALLEGIKLSTVAEVANQRVEVFKGCGFKKFLFERDERMRALKSKYEAEQKEMARLQGFVDRFGAQARISIATKASAAQSRVKMLQKMEANATPLPEGKSSFR----AKMRLPTPPACHTNQI-ELKGASFGWGDS-PPTATGVNLKLEKGQTLAILGPNGAGKSTLLKALAGILP--LSAGERKEGEGLKIGVFTQASKLTNMQTTIERNDLAQDLPQDAIALELVLDRVR---EHDTTVSDEQARTIL 1641
P ++EV G T GA + L+ +S+G + L+ N+D +V P +R G+VG NGAGKSTLL I G MDEG V + R+GYL+Q VSGS++TV EEA SEM I A +E +KV+ED +++AL+ L AQ +E +GG Q++LV +L GLGF ++D RLC FSGGWQMRIALA+LLLS+P LLLLDEP+NHLD++A+ WLG++++ Y G++V VSHD LL+ ++++AE+ + ++ C + K+L E++ R +++YE+ +E ARLQ F+D+FGA TKA +AQSRV ML+KM+ P + R ++ LP PP + + L GA+ G+ + PP ++LK+ +G L + GPNGAGKSTLLKAL G +P + AGER E + LK+G FTQ DLAQ+L ++ A++LV D R + D TV+DE AR++L
Sbjct: 59 PIEEEEVYGTVVGDTKGASLRLDNVAISRGASSLLKNIDWSVQPNERWGIVGINGAGKSTLLGAITGTVRMDEGHAFVHSNIRVGYLKQSAVSGSTKTVAEEARSEMTYIENAREKLEEV-SKVVEDGDYSEEALNDLAVAQEHFETIGGYQQEQLVDTVLKGLGFESEDSDRLCKGFSGGWQMRIALARLLLSKPSLLLLDEPSNHLDSSARDWLGKYIATYDGSVVLVSHDVGLLD-TSVNSIAEIVGNTLIEYRSCSYNKYLEEKEFRAATAQAEYESNVEEAARLQSFIDKFGA------GTKAKSAQSRVIMLEKMKKEGKLDPPPMAIMRDTKIPELVLPPPPKPNGEYLLTLSGATIGYNPAEPPLLQNIDLKISRGMKLLLRGPNGAGKSTLLKALRGNVPEMIQAGERIENDRLKLGTFTQ--------------DLAQELDPESRAVDLVTDYARMGADGDMTVTDEAARSVL 519 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1122.1054.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1122.1054.1 >prot_Ecto-sp9_F_contig1122.1054.1 ID=prot_Ecto-sp9_F_contig1122.1054.1|Name=mRNA_Ecto-sp9_F_contig1122.1054.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=550bp MKPVRMSRTLTPVLALMLLSSCKAFMTPAAVVARRTTTAPNNKYTAVQRVback to top mRNA from alignment at Ecto-sp9_F_contig1122:17205..26552+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1122.1054.1 ID=mRNA_Ecto-sp9_F_contig1122.1054.1|Name=mRNA_Ecto-sp9_F_contig1122.1054.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=9348bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1122:17205..26552+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1122:17205..26552+ >mRNA_Ecto-sp9_F_contig1122.1054.1 ID=mRNA_Ecto-sp9_F_contig1122.1054.1|Name=mRNA_Ecto-sp9_F_contig1122.1054.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3300bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1122:17205..26552+ (Ectocarpus species9 EcSCA_722f female)back to top |