mRNA_Ecto-sp9_F_contig1118.1013.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1118.1013.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIB2_ECTSI) HSP 1 Score: 741 bits (1914), Expect = 5.460e-259 Identity = 597/630 (94.76%), Postives = 598/630 (94.92%), Query Frame = 1
Query: 433 MPRSRKKVARFDPSPEAVASWNDTSLKTRVVVDLQARVRLGLSSPEGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLRAGHRXXXXXXXXXXSFSAGTTDSSSIXXXXXXXXXXXXSSYASQGGVPPSSTTATHQRLAWRPPQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVVTVKLARSQMPSRWAAPPPPFETCLRDVRPADKLGGRASGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGTPDTPXXXXXXXXXXGDAGGSEXXXXXXXXXAAT--------------AANAALADQSMVFKDVLGRPVVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVLRQEEDPPTSSGSPRSPDDGAASPEVVVVDPPLP 2280
MPRSRKKVARFDPSPEAVASWNDTSLKTRVVVDLQARVRLGLSSPEGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLRAGHRXXXXXXXXXXSFSAGTTDSSSIXXXXXXXXXXXX SYASQGGVPPSSTTATHQRLAWRP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVVTVKLARSQMPSRWAAPPPPFETCLRDVRPADKLGGRASGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWG PDTPXXXXXXXXXX XXXXXXXXX AANAALADQSMVFKDVLGRP+VYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVLRQEEDPPTSSG P SPDDGAASPEVVVVDPPLP
Sbjct: 1 MPRSRKKVARFDPSPEAVASWNDTSLKTRVVVDLQARVRLGLSSPEGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLRAGHRXXXXXXXXXXSFSAGTTDSSSIXXXXXXXXXXXXXSYASQGGVPPSSTTATHQRLAWRP--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVVTVKLARSQMPSRWAAPPPPFETCLRDVRPADKLGGRASGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGAPDTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAANAALADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVLRQEEDPPTSSGRPWSPDDGAASPEVVVVDPPLP 628
BLAST of mRNA_Ecto-sp9_F_contig1118.1013.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M2_9PHAE) HSP 1 Score: 677 bits (1747), Expect = 9.090e-234 Identity = 486/656 (74.09%), Postives = 496/656 (75.61%), Query Frame = 1
Query: 433 MPRSRKKVARFDPSPEAVASWNDTSLKTRVVVDLQARVRLGLSSPEGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLRAGHRXXXXXXXXXXSFSAGTTDSSSIXXXXXXXXXXXXSSYASQGGVPPSSTTATHQRLAWRPPQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------NVVTVKLARSQMPSRWAAPPPPFETCLRDVRPADKLGGRASGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGTPDTPXXXXXXXXXXGDAGGSEXXXXXXXXXAATAANAALADQSMVFKDVLGRPVVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVLRQEEDPPTSSGSPRSPDDGAASPEVVVVDPPL 2277
MPRSRKKVARFDPSPEAVASWNDTSLKTRVVVDLQARVRLGLSSPEGAAXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXX R G ++G S + A+ GGVPPSSTTATHQRLAW+PPQ+G XXXXXXXXXXXXXXXXXXXX NVVTVKLARSQMPSRWAAPPPPF+TCLRDVRPADKLGGRA CGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWG DTP GDA GSEXXXXXXXXXAATAANA LADQSMVFKDVLGRP+VYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMRED+DAWTTQADMTEYRRALQRYVEEVLR EE+ PTSSGS RSPDDGAASPEVVVVDPPL
Sbjct: 1 MPRSRKKVARFDPSPEAVASWNDTSLKTRVVVDLQARVRLGLSSPEGAAXXXXXXXXXXXXXXXXXXXXXXXXLARRXXXXXXXXXXXXSPAVG------------RGGASASGRGRQQQEEPASGRRPSRACAR-------------ATVGGVPPSSTTATHQRLAWQPPQSGATAAGRGDGXXXXXXXXXXXXXXXXXXXXNGASDTDSEYCSDLAGSASPPLSPLGFDECPPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVVTVKLARSQMPSRWAAPPPPFKTCLRDVRPADKLGGRA-----CGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGASDTPPPAAAASG--GDAMGSEXXXXXXXXXAATAANADLADQSMVFKDVLGRPIVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDIDAWTTQADMTEYRRALQRYVEEVLRHEEELPTSSGSTRSPDDGAASPEVVVVDPPL 624
BLAST of mRNA_Ecto-sp9_F_contig1118.1013.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU6_9STRA) HSP 1 Score: 221 bits (562), Expect = 1.070e-61 Identity = 135/340 (39.71%), Postives = 169/340 (49.71%), Query Frame = 1
Query: 1168 MPSRWAAPPPPFETCLRDVRPADKLGGRASGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGTPDTPXXXXXXXXXXGDAGGSEXXXXXXXXXAATAANAALADQSMVFKDVLGRPVVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVLRQ 2187
MP RWA P PPF TCL P L +SGG + G GD VD ++WL+S FID+V+A+FA Y HFMPI+FA L G D D+LG+ + Y+ ++P+IFL +V N+HWNLLRV+H PVPELQLFEP+GKP +R A +R IPK+V+ WLD + RGG GWA+R+ SAITRQQQTTGFDCGVASLLYAEKCGQ QMRED+DA TTQ D+T YR+ LQ+++ + Q
Sbjct: 1 MPYRWAEPLPPFVTCLNQPAPLRLLRSPSSGGLVA----------TDGVLRGALYGDSVDDESWLTSSFIDMVLAQFAACYRGAHFMPIEFAAFRLARMGRADMAACT----------------------------------------DILGQTIDYAARKPIIFLANVKNLHWNLLRVQHFPVPELQLFEPLGKPAKRA---------------HGAHSSEGVSYRYIPKDVFVWLDTMC-------ARGG---------------------GWATRSVSAITRQQQTTGFDCGVASLLYAEKCGQDQMREDIDAATTQDDITAYRQVLQKFLRSLAAQ 247
BLAST of mRNA_Ecto-sp9_F_contig1118.1013.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPQ6_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.970e-51 Identity = 122/347 (35.16%), Postives = 158/347 (45.53%), Query Frame = 1
Query: 1138 VVTVKLARSQMPSRWAAPPPPFETCLRDVRPADKLGGRASGGRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGTPDTPXXXXXXXXXXGDAGGSEXXXXXXXXXAATAANAALADQSMVFKDVLGRPVVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEV 2178
VVTV+LAR +MP RW P PPF + L V G + D V ++WLSS FID+V++++AR Y NVHFMP++FA L T D D+LG+ + Y+ ++PV+FL ++ N+HWNL RV+H P+ ELQLFEPMGKP R G R IPK + WLD VWPL S E W R+ SAIT Q Q TGFDCGVA +LYAEKC QG M+ED+D T Q+D T++R+ LQR + E+
Sbjct: 70 VVTVRLARCKMPYRWREPLPPFVSILNHV-----------GALHLDSDARRLDHATVTVLRRALSSDEVQDESWLSSSFIDLVLSRYARRYPNVHFMPVEFAAFRLKTMQTVDM----------------------------------------FQATDILGQRIDYNMRKPVVFLANIANMHWNLFRVQHWPLKELQLFEPMGKPATRHG----------------------VSLRYIPKHIIHWLDTVWPLGS-------------------------EAESWLFRSCSAITTQHQLTGFDCGVACILYAEKCAQGLMKEDIDDSTKQSDFTQFRQDLQRRLSEL 318
BLAST of mRNA_Ecto-sp9_F_contig1118.1013.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GCQ8_9STRA) HSP 1 Score: 187 bits (475), Expect = 3.220e-49 Identity = 122/343 (35.57%), Postives = 160/343 (46.65%), Query Frame = 1
Query: 1138 VVTVKLARSQMPSRWAAPPPPFETCLRDVRPADKLGGRASG-GRACGXXXXXXXXXXXXSMLGLGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGTPDTPXXXXXXXXXXGDAGGSEXXXXXXXXXAATAANAALADQSMVFKDVLGRPVVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQR 2163
VVTV+LAR +MP RW P PPF + L + D+ G AC SM GD V ++WLSS FID+V+++FA+TY ++HFMPI+F+ L D + D++G+ + Y+ +PVIF ++ N+HWN+LRV+H P+ ELQLFEPMGKP R G +R IP+ + WLD WPL G G S W +A SAIT Q Q FDCGVA LLYAEKC QG M+ED+ A T Q D+TE+R+ LQR
Sbjct: 73 VVTVRLARCKMPYRWREPLPPFVSILSETELFDQWSEAPDDTGAAC-----ISESVLHRSM----NGDEVKDESWLSSSFIDLVLSRFAKTYRSMHFMPIEFSEFRLKTMQKSDM----------------------------------------LQATDLVGKKIDYNIPKPVIFFANIANMHWNVLRVQHWPLKELQLFEPMGKPASRNG----------------------VSYRNIPQHIIHWLDTCWPLDEGHPKDSGGRS-------------------WIVQACSAITTQHQVNSFDCGVACLLYAEKCAQGMMKEDIHATTNQRDITEFRQCLQR 325
BLAST of mRNA_Ecto-sp9_F_contig1118.1013.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPU9_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.010e-37 Identity = 79/188 (42.02%), Postives = 102/188 (54.26%), Query Frame = 1
Query: 1615 VLGRPVVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEV 2178
+LG+ + Y+ ++PV+FL ++ N+HWNL RV+H P+ ELQLFEPMGKP R G R IPK + WLD VWPL S E W R+ SAIT Q Q TGFDCGVA +LYAEKC QG M+ED+D T Q+D T++R+ LQR + E+
Sbjct: 5 ILGQRIDYNMRKPVVFLANIANMHWNLFRVQHWPLKELQLFEPMGKPATRHG----------------------VSLRYIPKHIIHWLDTVWPLGS-------------------------EAESWLFRSCSAITTQHQLTGFDCGVACILYAEKCAQGLMKEDIDDSTKQSDFTQFRQDLQRRLSEL 145
BLAST of mRNA_Ecto-sp9_F_contig1118.1013.1 vs.
Match: ULP_PROTEASE (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y3L5_9STRA) HSP 1 Score: 150 bits (380), Expect = 4.080e-37 Identity = 95/296 (32.09%), Postives = 131/296 (44.26%), Query Frame = 1
Query: 1330 EGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGTPDTPXXXXXXXXXXGDAGGSEXXXXXXXXXAATAANAALADQSMVFKDVLGRPVVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEVLRQEEDPPTSSGS 2217
E D +D +WL+S +D+++ + A Y VHF+P DF L G + +D +DVLGR V Y RP++F + +HWNL RV+ P PELQLFEPMG+P R G R +P+ V WL+A +P H W SRA SAIT QQ +GFDCGVA LLYA+KCGQGQ R+++DA T Q +T +R LQ+ ++ + + +SSG+
Sbjct: 54 EDDSIDDTSWLTSTLMDLMLWRLAGQYPGVHFLPTDFFHCVLEGRSRSRSQHGRKRGP----------------------------SDCDFRVRDVLGRLVDYGSNRPLLFAVNCGRIHWNLFRVQLTPQPELQLFEPMGRPSSRSGL----------------------SHRYVPRSVVEWLEACYPQ----------------------------HPSWISRAVSAITAPQQVSGFDCGVACLLYADKCGQGQTRQEIDARTDQLAITGFRATLQQQLQAMQNNLNNSSSSSGN 271
BLAST of mRNA_Ecto-sp9_F_contig1118.1013.1 vs.
Match: Hypothetical (protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C2Y9_9STRA) HSP 1 Score: 134 bits (338), Expect = 8.540e-33 Identity = 81/184 (44.02%), Postives = 97/184 (52.72%), Query Frame = 1
Query: 1627 PVVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYVEEV 2178
P E RP++F +V N+HWNLLRV PEL+++EPMG+P RQ G S R +P+ V WLDAV CS G GG W SRA SAIT + Q TGFDCGVA LLYAEKC Q Q REDV+AWT QAD+T +RR LQ + E +
Sbjct: 23 PATAEESRPLLFFWNVGNMHWNLLRVLRGRRPELEIYEPMGRPVSRQ-----------------RDGVLSA--RSLPRCVVTWLDAV-------------CSLGEGGGS------------WGSRALSAITIKHQVTGFDCGVACLLYAEKCAQRQAREDVEAWTDQADITAFRRTLQDFFETI 162
BLAST of mRNA_Ecto-sp9_F_contig1118.1013.1 vs.
Match: ULP_PROTEASE (domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E1F7_BRELC) HSP 1 Score: 137 bits (344), Expect = 5.310e-32 Identity = 87/279 (31.18%), Postives = 127/279 (45.52%), Query Frame = 1
Query: 1324 LGEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGTPDTPXXXXXXXXXXGDAGGSEXXXXXXXXXAATAANAAL-ADQSMVFKDVLGRPVVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRAL 2157
+G D VD NW++ ID+V+ KFA++Y V+F+P F L L E + + L + + + +DVLGR V Y+ K+PV+F+ +V+ +HWNL RV+ P P+LQLFEPMGK R G +R +P+ V WL+ +P H+ W R SAI +QQ +GFDCGVA LLYA+KCG+GQ E+++ Q +T +R+ L
Sbjct: 92 IGPEDCVDESNWITGTLIDLVLWKFAKSYAAVYFLPTAFYHLHL-------------------------EMAQEIAVRPSWPQRSRGLRSKRDFIVRDVLGRVVDYNSKKPVVFVVNVDQIHWNLFRVQLSPKPKLQLFEPMGKLASRSGI----------------------SYRSVPRAVIEWLNVCYPQ----------------------------HKCWLQRTMSAIENKQQVSGFDCGVACLLYADKCGRGQSGEEINDSIDQNAITSFRKQL 295
BLAST of mRNA_Ecto-sp9_F_contig1118.1013.1 vs.
Match: ULP_PROTEASE (domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFQ0_9STRA) HSP 1 Score: 137 bits (344), Expect = 8.370e-32 Identity = 86/282 (30.50%), Postives = 119/282 (42.20%), Query Frame = 1
Query: 1327 GEGDVVDAKNWLSSGFIDVVMAKFARTYTNVHFMPIDFAVLCLNGWGTPD-TPXXXXXXXXXXGDAGGSEXXXXXXXXXAATAANAALADQSMVFKDVLGRPVVYSEKRPVIFLTHVNNVHWNLLRVEHDPVPELQLFEPMGKPPRRQGXXXXXXXXXXXXXXXXAPGGRSTGFRCIPKEVYRWLDAVWPLRSGGEIRGGSCSSGSGGSKRKAPSPTPSHEGWASRAYSAITRQQQTTGFDCGVASLLYAEKCGQGQMREDVDAWTTQADMTEYRRALQRYV 2169
G D +D +WL+ ID+++ KFA Y VHF+P F L P + +DVLGR V Y P++F+ +V +HWNL RV+ P P LQLFEPMG+ R G +R +P+ V WL+ +P H GW +R SAIT +QQ +GFDCGVA LLYA+KCG+GQ E+++A Q +T +R+ LQR +
Sbjct: 95 GPEDRIDETSWLTGTLIDLMLWKFANLYPTVHFLPTAFFHFHLEATNASSGVPWRRRRRRPKR-------------------------LKRDYQVRDVLGRVVDYDSDTPLVFIVNVGQIHWNLFRVQLQPTPRLQLFEPMGRLASRTGI----------------------SYRSVPRSVIEWLETCYPQ----------------------------HTGWLARTVSAITHKQQVSGFDCGVACLLYADKCGRGQSGEEINAQIDQQAITSFRKQLQRQL 301 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1118.1013.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1118.1013.1 >prot_Ecto-sp9_F_contig1118.1013.1 ID=prot_Ecto-sp9_F_contig1118.1013.1|Name=mRNA_Ecto-sp9_F_contig1118.1013.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=646bp MPRSRKKVARFDPSPEAVASWNDTSLKTRVVVDLQARVRLGLSSPEGAAAback to top mRNA from alignment at Ecto-sp9_F_contig1118:10534..15627+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1118.1013.1 ID=mRNA_Ecto-sp9_F_contig1118.1013.1|Name=mRNA_Ecto-sp9_F_contig1118.1013.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=5094bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1118:10534..15627+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1118:10534..15627+ >mRNA_Ecto-sp9_F_contig1118.1013.1 ID=mRNA_Ecto-sp9_F_contig1118.1013.1|Name=mRNA_Ecto-sp9_F_contig1118.1013.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3876bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1118:10534..15627+ (Ectocarpus species9 EcSCA_722f female)back to top |