mRNA_Ecto-sp9_F_contig1117.1007.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1117.1007.1
Unique NamemRNA_Ecto-sp9_F_contig1117.1007.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1117.1007.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ46_ECTSI)

HSP 1 Score: 837 bits (2162), Expect = 3.100e-296
Identity = 473/483 (97.93%), Postives = 474/483 (98.14%), Query Frame = 2 
Query:  221 MGSGGAAAWVESPLALVLAVCASVLALALGSRNMLLHARNYNFPRTQKYIFRILIVVPVYAICSCIAIIGSTGDVVVVALIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPLCCLARVRRDGTLLRLSKQSTLQFVVVKPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQSVVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDFIMEHHDKPVLENVREMINVRDVFQDAYHSFMPSYQDYVVARDDLDPNTPVAGGGGGVARPAXXSGGKKESRVVRTRTFLIGNLDRGNMSKPTLSTDGTQSTDESDNPAAGGGSHPANGGRGRLSVADEDLEGGLDEDWGHDVNVIELQNRLPDTSSSRGGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-SGTAASQGVAGVAV 1666
            MGSGGAAAWVESPLALVLAVCASVLALALGSRNMLLHARNYNFPRTQKYIFRILIVVPVYAICSCIAIIGSTGDVVVVALIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPLCCLARVRRDGTLLRLSKQSTLQFVVVKPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQ+VVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDFIMEHHDKPVLENVREMINVRDVFQDAYHSFMPSYQDYVVARDDLDPNTPVAGGGGGVARPAXXSGGKKESRVVRTRTFLIGNLDRGNMSKPTLSTDGTQSTDESDNPAAGGGSHPA GGRGRLSV DEDLEGGLDEDWGHDVNVIELQNRLPDTSSSRGGG XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXX  SGTAASQGVAGVAV
Sbjct:    1 MGSGGAAAWVESPLALVLAVCASVLALALGSRNMLLHARNYNFPRTQKYIFRILIVVPVYAICSCIAIIGSTGDVVVVALIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPLCCLARVRRDGTLLRLSKQSTLQFVVVKPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQNVVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDFIMEHHDKPVLENVREMINVRDVFQDAYHSFMPSYQDYVVARDDLDPNTPVAGGGGGVARPAXXSGGKKESRVVRTRTFLIGNLDRGNMSKPTLSTDGTQSTDESDNPAAGGGSHPAKGGRGRLSVDDEDLEGGLDEDWGHDVNVIELQNRLPDTSSSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEETXXXXXXQSGTAASQGVAGVAV 483
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1117.1007.1 vs.
Match: Organic (solute transporter Ostalpha-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q0_9STRA)

HSP 1 Score: 389 bits (999), Expect = 5.860e-120
Identity = 211/384 (54.95%), Postives = 259/384 (67.45%), Query Frame = 2 
Query:  245 WVESPLALVLAVCASVLALALGSRNMLLHARNYNFPRTQKYIFRILIVVPVYAICSCIAIIGSTGDVVVVALIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPLCCLARVRRDGTLLRLSKQSTLQFVVVKPTMAIL-----------------------------------------SLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQSVVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDFIMEHHDKPVLENVREMINVRDVFQDAYHSFMPSYQDYVVARDDLDPNTPVAGGGGGVARPAXXSGGKKESRVVRTRTFLIGNLD 1273
            WVESP AL +A+  +V+ALAL   N+  HA ++N PRTQKYIFRIL V+PVYAICSC+++I     VVV+ L  RD YEAFVVYSF TLILE+AGGDYNC EQIKHLPPV HP PLCCL  VRRD  LLR++KQ  +QFVVVKP MA+L                                         SL ALA G Y+  +FQ  LL+VYN +YS+ALY LL+FY A   LL PF+PVQKFFAVK+I+FAT+WQS++V+ +PGL++EQ LLWN++L+C+E V FALLLN AFP+HDF+    DK V +++R M+NV DVFQDAYHSFMPSYQDYVVARDD D   P+                 ++ +  R RTFL+GNLD
Sbjct:    5 WVESPGALAIAIICAVVALALSVYNIFKHAVHFNSPRTQKYIFRILGVIPVYAICSCVSVIAPGAAVVVLTL--RDVYEAFVVYSFFTLILEYAGGDYNCTEQIKHLPPVRHPPPLCCLPAVRRDAHLLRMTKQGVVQFVVVKPVMALLRGTVWYVWVSIVVMCXXXXXXXXXXXXXXXXXXXXXXXXXLSLAALAGGLYFEPAFQAVLLIVYNITYSMALYCLLLFYLAIQTLLTPFQPVQKFFAVKAIVFATFWQSMLVYLLPGLTAEQALLWNNFLLCVECVPFALLLNHAFPFHDFMTNTADKRVADSMRTMLNVGDVFQDAYHSFMPSYQDYVVARDDHD--NPL-----------------QQPKTFRARTFLVGNLD 367
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1117.1007.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBZ1_9STRA)

HSP 1 Score: 313 bits (801), Expect = 2.070e-94
Identity = 157/354 (44.35%), Postives = 228/354 (64.41%), Query Frame = 2 
Query:  242 AWVESPLALVLAVCASVLALALGSRNMLLHARNYNFPRTQKYIFRILIVVPVYAICSCIAIIGSTGDVVVVALIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPLCCLARVRRDGTLLRLSKQSTLQFVVVKPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQSVVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDFIMEH------HDKPVLENVREMINVRDVFQDAYHSFMPSYQDYVVARDDLDPNTPVAGGGGGVARPAXXSGGKKESRVVRTRTFLIGNLDRGNM 1285
            AWV S  AL +A+ +++L+ ALG  N   H +N+  PR+Q+Y+ RIL++ PVYAICSCIA+     +  V+A  VRD +EAF++Y+FL L+LE+ GGD NC++ IKH  P+ HPFPLCCL  +R+DG  LR  KQ TLQFV+VKP M ++ L+  + GQYY   +Q+TLLV+YN SY++ALY LL+FY A   LL    PV KFF++K+++FATYWQ V V   PG+S E    WN++++C+E+V F+ LL  AF   ++  ++       +K + E+  ++I+V+D+  DAYH+F+P+YQDYV+     D + PV                       R +T+L+GNLD   M
Sbjct:   29 AWVHSGAALAVAILSTILSTALGLYNSYRHLKNWTEPRSQRYVVRILLIAPVYAICSCIAV--PLRENAVIAETVRDMFEAFIIYTFLALVLEYCGGDLNCVDSIKHEAPLRHPFPLCCLPPLRKDGRFLRFCKQGTLQFVIVKPLMGVIGLITFSRGQYYRPEYQITLLVIYNISYTLALYCLLLFYLATHKLLEKHNPVLKFFSIKAMVFATYWQGVAVSLSPGISQEDATAWNNFILCVEMVVFSTLLLFAFGVEEYKRKNIEGLGVKNKDLWESFTDVISVKDLIADAYHNFVPAYQDYVLQSGTEDGDEPVR---------------------YRAKTYLVGNLDEDKM 359
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1117.1007.1 vs.
Match: Uncharacterized (protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZK83_PHYSP)

HSP 1 Score: 271 bits (693), Expect = 3.370e-77
Identity = 144/306 (47.06%), Postives = 211/306 (68.95%), Query Frame = 2 
Query:  245 WVES--PLALVLAVCASVLALALGSRNMLLHARNYNFPRTQKYIFRILIVVPVYAICSCIAIIGSTGDVVVVALIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPLC-CLARVRRDGTLLRLSKQSTLQFVVVKPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQSVVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDF---IMEHHDKPVLENVREMINVRDVFQDAYHSFMPSYQDYVVAR 1144
            WVE+   L+L+LA    V+A  L + N++ H  +Y+ P+ Q+YI RIL+VVPVYA+ S +++      +   +  +RDCYEAFVVYSFL L+L  AGG+  C+ +++  P + HP+PL  C   V RDG LLRL K++T+QFV +KP  A LSLL LA G+Y++ ++Q+ L+VVYN SYSVALYGL +FY A   +L PF PV KFFAVKS++F T+WQ+ ++ FIPG+++EQ   W D+++C+E+V FA +   AF    F   +    D  VL N++E++++ D+  DAYH+FMPSY+DY++ R
Sbjct:   31 WVETNRALSLLLAFACCVVATLLSAYNIVQHLAHYSRPQLQRYIVRILVVVPVYALGSLLSLTFVNQALYFDS--IRDCYEAFVVYSFLALVLSFAGGESVCVLKMQSEPDIRHPWPLSRCFEPVGRDGRLLRLCKRATIQFVFIKPIFAALSLLMLACGKYHTLAYQLILVVVYNISYSVALYGLWLFYLATRHILQPFNPVLKFFAVKSVVFLTFWQNSLLDFIPGITNEQTFAWKDFILCVEMVPFAFVHLLAFNSSQFKKNLDRLPDSEVLNNMKEVLSLSDILADAYHNFMPSYRDYMLQR 334
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1117.1007.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPF2_NANGC)

HSP 1 Score: 264 bits (675), Expect = 2.890e-76
Identity = 150/338 (44.38%), Postives = 208/338 (61.54%), Query Frame = 2 
Query:  263 ALVLAVCASVLALALGSRNMLLHARNYNFPRTQKYIFRILIVVPVYAICSCIAIIGSTGDVVVVALIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPLCCLARVRRDGTLLRLSKQSTLQFVVVKPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQSVVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDFIMEHHDK-PVLENVREMINVRDVFQDAYHSFMPSYQDYVVARDDLDPNTPVAGGGGGVARPAXXSGGKKESRVVRTRTFLIGNLD 1273
            A+ LA  A+ L+L +    +  H  NY+ PR Q+YI RIL + PVYA+ S  ++      V +    VRD  EAFV+YSFL L+LE+AGGD  C+++IK+ PP+ H FPL CLA + RDG  LR+ KQ TLQFV VKPTMA++SL+ LA G ++S  +Q  LLV+YN SYS+ALY L +FY     +L  + PV KF AVKS++FATYWQS+++    G   E++  WN++++C+E+V F+  L  AF   ++     D   VL N++E+++VRDV  DAYH+FMP+YQDY + R D                       +   R  R RTFL GN D
Sbjct:   39 AMALASIATALSLCISLFCIYKHLTNYSVPRIQRYIVRILFISPVYALGSLFSLRFPGSSVGLET--VRDMMEAFVIYSFLALVLEYAGGDSACVDRIKNEPPLRHFFPLGCLAPMPRDGRFLRVCKQGTLQFVFVKPTMALVSLIMLAKGLFWSRWYQAALLVIYNLSYSLALYCLALFYTGTKVILRRYSPVAKFLAVKSVVFATYWQSLLLLLWAG--PERVSAWNNFILCIEMVFFSTFLGLAFSHKEYRQSLPDNINVLHNMKEVLSVRDVVADAYHNFMPTYQDYTLHRHD--------------------GSSRGNQRKYRARTFLAGNFD 352
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1117.1007.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYJ3_PHYRM)

HSP 1 Score: 268 bits (685), Expect = 3.970e-76
Identity = 146/306 (47.71%), Postives = 213/306 (69.61%), Query Frame = 2 
Query:  245 WVESPLA--LVLAVCASVLALALGSRNMLLHARNYNFPRTQKYIFRILIVVPVYAICSCIAIIGSTGDVVVVALIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPLC-CLARVRRDGTLLRLSKQSTLQFVVVKPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQSVVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDF---IMEHHDKPVLENVREMINVRDVFQDAYHSFMPSYQDYVVAR 1144
            WVE+  A  L+LA+   V+A  L   N++ H  +Y+ P+ Q+YI RIL+VVPVYA+ S +++  S  +  +    +RDCYEAFVVYSFL L+L  AGG+  C+ +++  P + HP+PL  CL  + RDG LLRL K++T+QFV VKP  A LSLL LA G+Y++ ++Q+ L+VVYN SYS+ALYGL +FY A   +L PF PV KFFAVKS++F T+WQS ++ FIPG+++EQ   W D ++C+E+V FA +   AF  + F   +    D  VL+N++E++++ D+  DAYH+FMPSY+DY++ R
Sbjct:   31 WVETHRASSLLLALGCCVVASLLSVYNIVQHLAHYSRPQLQRYIVRILVVVPVYALGSLLSL--SFVNQALYFDSIRDCYEAFVVYSFLALVLSFAGGESVCVLKMQSEPDIRHPWPLSRCLDPLGRDGRLLRLCKRATIQFVFVKPIFAALSLLMLACGKYHTLAYQLILVVVYNVSYSLALYGLWIFYLATRHILQPFNPVLKFFAVKSVVFLTFWQSSLLDFIPGITNEQTFAWKDLILCVEMVPFAFVHLLAFNSNQFKKNLDRLPDSEVLKNMKEVLSLSDILADAYHNFMPSYRDYMLQR 334
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1117.1007.1 vs.
Match: Uncharacterized (protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y9D0_9STRA)

HSP 1 Score: 265 bits (678), Expect = 2.360e-75
Identity = 152/340 (44.71%), Postives = 209/340 (61.47%), Query Frame = 2 
Query:  266 LVLAVCASVLALALGSRNMLLHARNYNFPRTQKYIFRILIVVPVYAICSCIAIIGSTGDVVVVALIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPL-CCLARVRRDGTLLRLSKQSTLQFVVVKPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQSVVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDFIMEHHDKP---VLENVREMINVRDVFQDAYHSFMPSYQDYVVARDDLDPNTPVAGGGGGVARPAXXSGGKKESRVVRTRTFLIGNLD 1273
            L  A  A++ A AL + NM  H R+Y  P  Q+YI RIL++VPVYAI S ++             IVRD YEAFVVYSFL L+L  AGG+ NC+ ++     +PHPFP   C A + RDG LLR  K++T+QFV +KPTMA LSL+ L LG Y S  FQ    VVYN+SYS+ALYGLL+FY A   +LAPF PV KFFAVKS+IF T+WQ++++  +P ++ EQ   WND+++ +E+   A++   +F    F       P   V++N++E+++V+D+  DAYH+FMPSYQDY++ R D                        +    +RT+TFL GNLD
Sbjct:   43 LFFAAVAALFASALTAFNMYQHLRSYTRPNLQRYILRILLIVPVYAIGSFLSF--KFVREATYFNIVRDMYEAFVVYSFLNLVLAFAGGESNCVSKMVSEAEIPHPFPFGYCFAPMARDGRLLRNCKKATIQFVFLKPTMAFLSLMMLGLGAYDSVGFQWFQWVVYNASYSIALYGLLIFYLATKHILAPFSPVLKFFAVKSVIFLTFWQTLLIDGLPHITKEQAFAWNDFILAIEMAPVAIMYYFSFRASQFKNTCEAIPQSEVVKNMKEVLSVKDIVADAYHNFMPSYQDYMLQRGD-----------------------DEFPEKIRTQTFLAGNLD 357
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1117.1007.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RFZ8_9STRA)

HSP 1 Score: 266 bits (679), Expect = 2.780e-75
Identity = 141/306 (46.08%), Postives = 214/306 (69.93%), Query Frame = 2 
Query:  245 WVES--PLALVLAVCASVLALALGSRNMLLHARNYNFPRTQKYIFRILIVVPVYAICSCIAIIGSTGDVVVVALIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPLC-CLARVRRDGTLLRLSKQSTLQFVVVKPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQSVVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDF---IMEHHDKPVLENVREMINVRDVFQDAYHSFMPSYQDYVVAR 1144
            WVE+   ++L++A    V+A  L   N++ H  +Y+ P+ Q+YI RIL++VPVYA+ S +++      +   +  +RDCYEAFVVYSFL L+L  AGG+  C+ +++  P + HP+PL  CL  V RDG LLR  K++TLQFV +KP  A LSLL LA G+Y++ ++Q+ L+VVYN SYS+ALYGL +FY A   +L PF PV KFFAVKS++F T+WQS ++ F+PG+++EQ   W D+++C+E+V FA++  +AF  + F   +    D  VL+N++E++++ D+  DAYH+FMPSY+DY++ R
Sbjct:   31 WVETHRAVSLLIAFGCCVVASLLSVYNIVQHLAHYSRPQLQRYIVRILVIVPVYAMGSLLSLTFVNQALYFDS--IRDCYEAFVVYSFLALVLSFAGGESVCVLKMQGEPDIRHPWPLNRCLDPVGRDGRLLRSCKRATLQFVFIKPIFAALSLLMLACGKYHTLAYQLILVVVYNISYSMALYGLWVFYLATKHILQPFNPVIKFFAVKSVVFLTFWQSSLLSFVPGITNEQSFAWKDFILCLEMVPFAVIHLAAFNSNQFKKNLDRLPDSEVLKNMKEVLSLSDIVADAYHNFMPSYRDYMLQR 334
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1117.1007.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXL2_GLOUD)

HSP 1 Score: 264 bits (674), Expect = 1.330e-74
Identity = 142/309 (45.95%), Postives = 208/309 (67.31%), Query Frame = 2 
Query:  242 AWVESPLA--LVLAVCASVLALALGSRNMLLHARNYNFPRTQKYIFRILIVVPVYAICSCIAIIGSTGDVVVVALIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPLC-CLARVRRDGTLLRLSKQSTLQFVVVKPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQSVVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDF---IMEHHDKPVLENVREMINVRDVFQDAYHSFMPSYQDYVVARDD 1150
            AW+E+  A  L++A      A  L   N+  H ++Y+ P+ Q+YI RIL++VPVYA+ S +++I     +       RDCYEAFVVYSFL L+L  AGG+  C+ +++  P + H +PL  CL  + RDG LLR  K++T+QFV++KP  A+LSL+ LA GQYY+ ++Q+ L +VYN SYS+ALYGL +FY A   +L  F PV KFFAVKSI+F T+WQS ++ F+PG+++EQ   W D+++C+E+V FA L   AF    F   +    D  VL+N++E++++ D+  DAYH+FMPSYQDYV+ R +
Sbjct:   28 AWIETNRAESLLIATACCFAASLLSVFNIYQHLQHYSRPQLQRYIVRILVIVPVYALGSLLSLIFVNQALYFDTF--RDCYEAFVVYSFLALVLSFAGGESVCVVKMQGEPDITHAWPLSRCLRPIGRDGRLLRSCKRATIQFVLIKPFFALLSLVMLAFGQYYTLAYQLILEIVYNISYSLALYGLWLFYLATKHILKTFNPVLKFFAVKSIVFLTFWQSGLIDFVPGITNEQSFAWKDFILCVEMVPFAFLHFLAFNPSQFKKNLDRLPDSEVLKNMKEVLSLSDLVADAYHNFMPSYQDYVLQRGE 334
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1117.1007.1 vs.
Match: Uncharacterized (protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDP9_PYTIN)

HSP 1 Score: 258 bits (660), Expect = 2.920e-74
Identity = 137/286 (47.90%), Postives = 197/286 (68.88%), Query Frame = 2 
Query:  305 LGSRNMLLHARNYNFPRTQKYIFRILIVVPVYAICSCIAIIGSTGDVVVVALIVRDCYEAFVVYSFLTLILEHAGGDYNCIEQIKHLPPVPHPFPLC-CLARVRRDGTLLRLSKQSTLQFVVVKPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGPLLAPFRPVQKFFAVKSIIFATYWQSVVVHFIPGLSSEQILLWNDWLICMELVAFALLLNSAFPWHDF---IMEHHDKPVLENVREMINVRDVFQDAYHSFMPSYQDYVVARDD 1150
            L   N+  H ++Y+ P+ Q+YI RIL++VPVYA+ S +++      +    L  RDCYEAFVVYSFL L+L  AGG+  C+ +++  P + H +PL  CL  + RDG LLR  K++TLQFV++KP  A+LSL  LA GQY++ ++Q+ L VVYN SYS+ALYGL +FY A   +L  F PV KFFAVKS+IF T+WQS ++ F+PG+++EQ   W D+++C+E+V FALL   AF    F   +    D  VL+N++E++++ D+  DAYH+FMPSYQDY++ R D
Sbjct:    2 LSVYNIYQHLQHYSRPQLQRYIVRILVIVPVYALGSFLSLKFVNQALYFDTL--RDCYEAFVVYSFLALVLSFAGGESVCVLKMQSEPDITHAWPLNRCLHPIARDGRLLRSCKRATLQFVLIKPLFALLSLFMLACGQYHTLAYQLILTVVYNISYSLALYGLWLFYLATKHILKTFNPVLKFFAVKSVIFLTFWQSGMIDFVPGITNEQSFAWKDFVLCVEMVPFALLHFLAFNPSQFKKNLDRLPDSEVLKNMKEVLSLSDIIADAYHNFMPSYQDYMLQRAD 285
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1117.1007.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.100e-29697.93protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ46... [more]
Organic5.860e-12054.95solute transporter Ostalpha-domain-containing prot... [more]
Hypothetical2.070e-9444.35protein (Fragment) n=1 Tax=Pinguiococcus pyrenoido... [more]
Uncharacterized3.370e-7747.06protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZK... [more]
Uncharacterized2.890e-7644.38protein (Fragment) n=1 Tax=Nannochloropsis gaditan... [more]
Uncharacterized3.970e-7647.71protein n=1 Tax=Phytophthora ramorum TaxID=164328 ... [more]
Uncharacterized2.360e-7544.71protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepI... [more]
Uncharacterized2.780e-7546.08protein n=3 Tax=Phytophthora kernoviae TaxID=32545... [more]
Uncharacterized1.330e-7445.95protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
Uncharacterized2.920e-7447.90protein n=2 Tax=Pythium insidiosum TaxID=114742 Re... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1117contigEcto-sp9_F_contig1117:15437..23703 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score840.1
Seed ortholog evalue5.1e-241
Seed eggNOG ortholog2880.D8LQ46
Preferred nameTMEM184B
KEGG koko:K01414
GOsGO:0000003,GO:0003006,GO:0003674,GO:0005215,GO:0005488,GO:0005539,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005886,GO:0006950,GO:0006952,GO:0007275,GO:0007399,GO:0007530,GO:0008037,GO:0008038,GO:0008039,GO:0008150,GO:0008201,GO:0009605,GO:0009607,GO:0009620,GO:0009987,GO:0010008,GO:0012505,GO:0012506,GO:0016020,GO:0016021,GO:0018992,GO:0022008,GO:0022414,GO:0030141,GO:0030154,GO:0030182,GO:0030246,GO:0030659,GO:0030667,GO:0031090,GO:0031224,GO:0031410,GO:0031901,GO:0031982,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0048468,GO:0048471,GO:0048666,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050832,GO:0050896,GO:0051046,GO:0051049,GO:0051704,GO:0051707,GO:0065007,GO:0071944,GO:0097367,GO:0097708,GO:0098542,GO:0098588,GO:0098805,GO:0099503,GO:1901681
EggNOG free text desc.negative regulation of brassinosteroid mediated signaling pathway
EggNOG OGsKOG2641@1,KOG2641@2759
EC3.4.24.70
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Hectar predicted targeting categorysignal peptide
Exons9
Model size2980
Cds size1449
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928357.9418466-UTR-Ecto-sp9_F_contig1117:15436..156561622928357.9418466-UTR-Ecto-sp9_F_contig1117:15436..15656Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1117 15437..15656 +
1692277844.8128657-UTR-Ecto-sp9_F_contig1117:15436..156561692277844.8128657-UTR-Ecto-sp9_F_contig1117:15436..15656Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1117 15437..15656 +
1622928358.3402865-UTR-Ecto-sp9_F_contig1117:22392..237031622928358.3402865-UTR-Ecto-sp9_F_contig1117:22392..23703Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1117 22393..23703 +
1692277844.9239645-UTR-Ecto-sp9_F_contig1117:22392..237031692277844.9239645-UTR-Ecto-sp9_F_contig1117:22392..23703Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1117 22393..23703 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928357.9541104-CDS-Ecto-sp9_F_contig1117:15656..157251622928357.9541104-CDS-Ecto-sp9_F_contig1117:15656..15725Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 15657..15725 +
1692277844.8346226-CDS-Ecto-sp9_F_contig1117:15656..157251692277844.8346226-CDS-Ecto-sp9_F_contig1117:15656..15725Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 15657..15725 +
1622928357.96635-CDS-Ecto-sp9_F_contig1117:17309..174551622928357.96635-CDS-Ecto-sp9_F_contig1117:17309..17455Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 17310..17455 +
1692277844.8471017-CDS-Ecto-sp9_F_contig1117:17309..174551692277844.8471017-CDS-Ecto-sp9_F_contig1117:17309..17455Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 17310..17455 +
1622928357.9782429-CDS-Ecto-sp9_F_contig1117:17906..180421622928357.9782429-CDS-Ecto-sp9_F_contig1117:17906..18042Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 17907..18042 +
1692277844.8574233-CDS-Ecto-sp9_F_contig1117:17906..180421692277844.8574233-CDS-Ecto-sp9_F_contig1117:17906..18042Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 17907..18042 +
1622928357.990459-CDS-Ecto-sp9_F_contig1117:18469..186371622928357.990459-CDS-Ecto-sp9_F_contig1117:18469..18637Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 18470..18637 +
1692277844.8692691-CDS-Ecto-sp9_F_contig1117:18469..186371692277844.8692691-CDS-Ecto-sp9_F_contig1117:18469..18637Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 18470..18637 +
1622928358.0008035-CDS-Ecto-sp9_F_contig1117:19424..196041622928358.0008035-CDS-Ecto-sp9_F_contig1117:19424..19604Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 19425..19604 +
1692277844.8763309-CDS-Ecto-sp9_F_contig1117:19424..196041692277844.8763309-CDS-Ecto-sp9_F_contig1117:19424..19604Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 19425..19604 +
1622928358.0144136-CDS-Ecto-sp9_F_contig1117:20311..203651622928358.0144136-CDS-Ecto-sp9_F_contig1117:20311..20365Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 20312..20365 +
1692277844.8840885-CDS-Ecto-sp9_F_contig1117:20311..203651692277844.8840885-CDS-Ecto-sp9_F_contig1117:20311..20365Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 20312..20365 +
1622928358.028276-CDS-Ecto-sp9_F_contig1117:20610..207171622928358.028276-CDS-Ecto-sp9_F_contig1117:20610..20717Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 20611..20717 +
1692277844.893497-CDS-Ecto-sp9_F_contig1117:20610..207171692277844.893497-CDS-Ecto-sp9_F_contig1117:20610..20717Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 20611..20717 +
1622928358.0456555-CDS-Ecto-sp9_F_contig1117:21300..215381622928358.0456555-CDS-Ecto-sp9_F_contig1117:21300..21538Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 21301..21538 +
1692277844.9040465-CDS-Ecto-sp9_F_contig1117:21300..215381692277844.9040465-CDS-Ecto-sp9_F_contig1117:21300..21538Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 21301..21538 +
1622928358.3260882-CDS-Ecto-sp9_F_contig1117:22041..223921622928358.3260882-CDS-Ecto-sp9_F_contig1117:22041..22392Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 22042..22392 +
1692277844.9121444-CDS-Ecto-sp9_F_contig1117:22041..223921692277844.9121444-CDS-Ecto-sp9_F_contig1117:22041..22392Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1117 22042..22392 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1117.1007.1prot_Ecto-sp9_F_contig1117.1007.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1117 15657..22392 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1117.1007.1

>prot_Ecto-sp9_F_contig1117.1007.1 ID=prot_Ecto-sp9_F_contig1117.1007.1|Name=mRNA_Ecto-sp9_F_contig1117.1007.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=483bp
MGSGGAAAWVESPLALVLAVCASVLALALGSRNMLLHARNYNFPRTQKYI
FRILIVVPVYAICSCIAIIGSTGDVVVVALIVRDCYEAFVVYSFLTLILE
HAGGDYNCIEQIKHLPPVPHPFPLCCLARVRRDGTLLRLSKQSTLQFVVV
KPTMAILSLLALALGQYYSDSFQVTLLVVYNSSYSVALYGLLMFYRACGP
LLAPFRPVQKFFAVKSIIFATYWQSVVVHFIPGLSSEQILLWNDWLICME
LVAFALLLNSAFPWHDFIMEHHDKPVLENVREMINVRDVFQDAYHSFMPS
YQDYVVARDDLDPNTPVAGGGGGVARPAGGSGGKKESRVVRTRTFLIGNL
DRGNMSKPTLSTDGTQSTDESDNPAAGGGSHPANGGRGRLSVADEDLEGG
LDEDWGHDVNVIELQNRLPDTSSSRGGGKSKPKSKRSKGAAAAAAEVEAA
AVAAAAQEETAAAAAAAPSGTAASQGVAGVAV*
back to top

mRNA from alignment at Ecto-sp9_F_contig1117:15437..23703+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1117.1007.1 ID=mRNA_Ecto-sp9_F_contig1117.1007.1|Name=mRNA_Ecto-sp9_F_contig1117.1007.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=8267bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1117:15437..23703+ (Ectocarpus species9 EcSCA_722f female)
GGTGTTTCTCATCTCGCACATCACCTGTCACACGTTCATCTCCGCGCAAC
GAAGCAAGGACAGGAACCCTAGCATAATCTCGGCACTATTGGTAGAGTGT
GGTATCACGACGGACAGCAAGAAGGGCTACATCGCATCAGGATAAGCGAC
CCCGAAGCTAGCAAGAGTGCGCGCCGGGGGTGGTTGATATTGAAGTCTTT
TCAACCGAGGGGCACGCGCGATGGGTTCGGGAGGAGCCGCAGCGTGGGTG
GAGAGTCCGCTGGCACTCGTGTTAGCCGTGTGCGCATCCGTGAGTAACCA
CGTGGGACGGTATAGCGATGAGACAGCAGTAGTACTAAGCAGTACGTTAT
CTCGACACCCGGCGGCGGCGGAATCAATGTTTTGAGACCTCTTTCCGCCG
GTGAAATCCCGCTCTCTCCCTCTCCTAGCTTCGCTTCCTCTCCATGCCGT
TGAGCGAAGGATCGCCTAACACGCACACACTAACCAACCGACCGGCAGAG
GCGGGCACGTGGTAGTGTATCACCCTGCACCCCCTGCTGTATTAATCCCA
CCAACATTTTGTGCGCCTATCTGCAACGCTTCGCGTAAGCTTCATGTGTG
GGTCGCCCCAAAGAGGTGAAGCACGAAAGCCACGTGCCATCAAGCCCGTG
CCCGCGCGGACGAACTGCCTACGTTATCCTGACGTAGATGAATAACTTCA
ACCAGTCGCTTGAGGGTGCTCTGAGCGATGCGCTGGCTAGTCGAACGGAA
ATATGATATTTCTCTCGCACGTTTGCTACGAAGCGTACAAGGCGACTTCG
TTTGCTGACCCCCTTTGGCCTACTCTCAGACAACATGAAAATATGCGTGT
GCAACTGCTGCCTCCCTCCCCTACTGCTGCATGTATCTTAGAGCAGCACG
ATACCAACGAAAGACACAGCAGTAAGCTATTGCATAATACCTCGGCTGTC
TGTTGTGTTTCCGGAAGATGAGATTCCACTCTCACACAGCTATGTATGTA
GTTGCCTTCCGTGAAATACGGAACAGGGACACCATGTAGTCGAATTTATC
CGCCTTTTCCACCGCTCGGTTCCAGCTGAGTCCACCAAAAAGTACGTACA
TATCCAGTCATACCTCCGGTTGACAATCAGCCCTTACAGCGTAGGTTACC
AAAGGCCTCGGCTAGGTCGAAGTGACGGATGTCCTCTTTGTTTCAGCACC
AGGCCTCGCTTCTCAACCTTGCTTGCGTCAGTAAATTGCTGCAGAAGACC
CCGTTCTCCAACCGTAAGTGCTCTGAGATTGGCCTCAACAGTGTTCCTTC
GAAGCACCTTTAATAGTCAACTCCAGCAGTCGACTGCTTTGAAGTGCGCT
TTTAGATTTCCCACAAGGGCAACCGATGTTGTAGAGTTAAAATGGCAGAC
AAGCTAAACATGCATGGCTGCGATCGCAGGTGTCGCCGCCGAACCGAAAT
CCTCAACTCCCGGACGCCCAACTTCTGTGTTGCGATTAGCACCAACTTCT
GTGTTGCGATTAGCACCAACTTCTGTGTTGCGATTAGCACCAACTTCTGT
GTTGTGATTAGCACCAACTTCTGTGTTGCGATTAACACCAACTTCTGTGT
TGCGATTAGCACCAACTTCTGTGTTGCGATTAGCACCAACTTCTGTGTTG
CGATTAGCACCTGCTGCGGACAAGACCGGCCCATACCTGGTGGTGTGACT
TTGTTGCATGCATACAGCATTGGGTCCAGGTTTCTACGCCTGTAAGGTTT
TATGGTTGGGTTCCTGGTTGGGAAAAAACATTGGAGGTTGTCACGCAACT
TGGATTATTTCATTCGTTGCGCTGATTGCACGGACGGTGATTGTACGGAC
ACACGTGCTTTCCGCGAACGCAGGTGCTGGCGTTGGCGCTCGGCAGCCGA
AACATGCTACTGCACGCGCGCAACTACAACTTCCCTCGGACGCAGAAGTA
CATATTCCGCATTCTCATCGTGGTTCCGGTCTACGCCATCTGTTCGTGCA
TCGCCATCATCGGCTCCACGTAAGTTTATTCTGTTTTGTTGTGAGGGTTG
TTTCTATCCGTTGACTCTTGCTGTTACACAAGATCTACTCAAGTGCAGAG
GACGTGTTCTGGGCGTTTGCGAGTACCGCACACACACGCGCGCGAAGTTT
AGTCTTTTATGTACGTATTTTCTGTATTGAACGTCGTAGCAAGAGAGTCG
AGCGTTTCATGTTGTTTCAGCACTCAACAGGTAATTTTGTTAGGACGCAA
TATTGCTGTTTTTCAACGGTTCCCAAAACATTCCCACTGCTGTAGACAAT
GATAACGAATAGAAGACGTACTACTCCAACTAGCCGGGCTTAACACCCAG
ACGCTTAAGCCATGTATAATTTCGAGTCGGCTGTAGAAGCTTCGCAAATG
CGACCGAGTCCGTTTCTCAACAATCGCTCTTGCATGCGCTCCTCCCCCTC
CCTTGTTGCTTTGCTTTCAGAGGCGACGTGGTTGTGGTGGCCTTGATCGT
TCGCGACTGCTACGAGGCCTTCGTTGTGTACTCTTTTCTTACCCTCATCC
TCGAGCACGCAGGGGGCGACTACAACTGCATCGAGCAGATCAAGCACCTG
CCACCGGTGAGCGCGAGGTCTCCGTTGCCACTCTTGTCCCTCACGGGGCA
TTTATTTGAGTGTGGCCCGTGATGCTCACCCTCGCCGCATGGGTCCACGC
TCACGAGCACTCGGTTATTCGATCTGCGCGTCGAAGCAGCTGCTGTCTGT
GTTTCTGAGGACCTTTCGAGAATGCCGATACATTTGCGACGCGTAAGCGC
ACTCTCAAGCATTCAGGGGACAAAGCCTTGCCCCCACCCCCGTTACTATA
CCGAAACGCCGACGTCGAAAAGACCTGCCCCACACCCTGCCCCACACGTC
GCTTGACGGCTTCGTCAGCACTGCGCCATCAACCAACCTCCTGCACCCCT
CTCGTTCTTGTTTAACGTACCATACTCCCGTTTCCGTTTCCGCCTGTGTC
TTGATCGTGATTTTTGGGTTTTTGGTTTGGAAGGTGCCGCACCCTTTCCC
ACTGTGCTGCTTGGCTCGTGTGCGTCGGGACGGCACCCTCCTCCGCCTGT
CGAAGCAATCGACCCTGCAGTTCGTGGTCGTGAAGCCGACCATGGCCATC
CTTAGTCTTCTCGCCCTCGCGCTTGGGCAGTACTACTCCGACTCGTTCCA
GGTGTGTACTTTACCATACCATACCATGTACAATGATGAATTTCGTGCCG
CCGACGAGGGTTAGCGTGTGTTCGTCGTTTCTCCGGCTGCTGCTGCCTGC
TGCTGCTGCGTTCCCTGGCGTGTTTTGTGTGCTTGGGGGCGTGTACTGTA
CTCTCTCTCTCTCTCTCTCTCACTCTCTCTCTCTCTCCCCGTTTTGAAAT
TTTCTTGCTTGTATCCCTATGTGATACATAGCGCCCCGTGGCCTGCGAGC
ATGCTTTTCGTTTTTTCTTTTCTTACAACCTCCCCCAAAAATTATCTCGA
GTCCAGGATGTATTGTAGCAATGTTTTCACAGTGATTTTTGTCTTCTCTT
CTTTTCTGTGTCGGTATTGCTCTTCCTTACCGTATCTGTGTCTGCGCTCA
CCTTGATGCGTCGGCGAGGGGAGGTACACCCCTCTGTCCTTCCTTACCCC
TATCCTAGAGAACAATGGCGTCGCTCTCACGCTATGGCGCGTGCTCGTAG
TGAGTCCGCGTTGACGTTCACACCGGTGTATGTGGAGGTGGCCTTTACAG
GTTGCAACTCCCCAGTATTTGTCGAGGACTCCTCCGTCTTTCGCATTGGC
ATCGGCGAAGAGATAAACTTTCCGTAGGTATCTGCTTCGCTTTGCGTCTG
CACCACTTCTCAACCCCTTTCTCTCCCGCCTCCCCTGTTACCTCCGCATG
CGCTGCTCCCTCTCCGCACCACTTCTCAACCCCTCTCTCTCCCGCCCTCC
CCTGTAACCTCCACATGCGCTGCCCTCCCCCCCCCAAGGTAACCCTTCTG
GTGGTGTACAACTCCAGCTACAGCGTGGCGCTCTACGGTTTGCTTATGTT
CTACAGGGCGTGCGGCCCCCTGCTGGCGCCGTTCAGGCCTGTTCAGAAGT
TTTTTGCCGTGAAGAGCATCATCTTCGCCACCTACTGGCAGAGCGTCGTC
GTGCACTTCATTCCCGGGGTGAGTGAGTCGCTTCTGTTAGGGTCTATTCA
GCCGAACAGCCCGGTTTAGTCAAGCAGACTAGCCGTGATAGGTCCCCTAG
CTTCGCGCTCTTGTGTGGAAAACAAATGTCGATTTGTCGGTTCGGTTGGG
GCCATTCAGCCGTAACAGCCTCCCCAAGCTTCGCTCTCTTGTGATCCTGG
TGTGGTAGTACAAGAACAAATATTGGTGAGTCGATTCGGTTGGGATCTCT
TCAGCCGAACGGTCCAGTCTAGCCAAACGGTCTAGAATAGCTAACCACCA
CAGGCCCCCAAGCTTCGCTCTCTTGTGATCCTGGTGTGGTAGTACAAGAA
CAAATATTGGTGAGTCGATTCGGTTGGGATCTCTTCAGCCGAATGGTCCA
GTCTAGCCAAACGGTCTAGAATAGCTAACCACCACAGGCCCCCAAGCTTC
GCACTTTTGTGTTCCTGGCGTGGAAAACAATTTAGTGTATCGGTGAGTCG
CATCGGTTCTCTTCAGCCAAACAGCCCGGTCTAGTCAAACGGGCTGCAAG
TAGCTAGCCACCACAGGCACCAAACCGTCGCGCTCTTGTTGTGCCTGCCT
TGGGAAAAAAATCAATTGATGACGCCCGCCTCTGCTTTACTGCCCTCTGC
CTTCTTCCTGCTGCCCCCGCCACCTCGAAACCGAACGGACGGTGTCAACG
ACCACCTTGGTACGGTCGAGGACAGCTATCCTCGGAGCAAATCCTCCTGT
GGAACGACTGGCTAATCTGCATGGAGCTGGTGAGCCTCCTCTCCCATGTT
GGTGTTGGTGCATTTCGTCAGGAATTGGCTTTACGGTTCGAACCTTGTGT
CCATCCACAGACTCAAAACACTGCTGTGGATGCGGTTCGAACCCTGACTA
CCCGTCGTGCTCATGCTTTGGTTGTCTAGTAGTTGCATTACCTCTTGAAT
TTTGCGGTTTGACGAGGCTAGCTTACGTCTGAAATGAACCAAAACGCAAT
GCAAACATGTTGTTTGTATCGTAGGTGGCGTTTGCCCTGCTGCTGAACTC
AGCGTTCCCGTGGCACGATTTCATCATGGAGCACCACGACAAGCCGGTGC
TTGAAAACGTCCGGGAGATGATCAACGTCAGGTACGACAAATAATGATGT
GGGCGATGAAACAACGATTTGGGGTATGCGACCCGGTGTTTCCCTGTGCC
GCTGCAGTCTATCGGGAAAGGAGGTAAAACGCTACTGTACGTACACTGTG
GGTCATGGGCTAGACCAACTCTAACACGAAAGTATTATTCCAGCGAAACA
GAGCAAGTAGCCGAGTACAAACTGGTACTAGAGAACTATCTTGAAGTTGT
GCCGACAACCCCCTCAGCTTCGCAGCATTAACCCGTTGGGGCCTTCCTCG
CTTGGACGCCTTGTGGACCGCTCTTGGTGCTGTAGGTTTAGGGATGTCGT
TCCACGGGCGGGAAAGTCACCTAGAGTCACGTTTCAAGCGGCATGCTACT
CCCTTATTCGTGTTTTTCTACGCTACAGCAGTCGTACATTTTGCAGCAGC
AGCAATAGCAGGACTAGCGCTTGTGCCGTACATTTTGCAGCAGCGGCAGC
AGCAATAGCAGGACTGGCGCTTGTGCCGTCGTCGCCACAAGCAGCCATGC
CAGCCAACACCCCCAGCAAACGTCTGCTTTTCCCTCTCCTGTACCCCCCG
TGTTCCGAACCCAGGGACGTCTTCCAAGACGCGTACCACAGCTTCATGCC
GTCCTACCAAGACTACGTCGTGGCCAGGGACGACCTCGACCCCAACACGC
CCGTCGCAGGCGGGGGGGGAGGGGTCGCACGCCCTGCGGGGGGTAGCGGC
GGGAAGAAGGAGTCGCGGGTGGTTCGCACTCGGACGTTTCTTATCGGCAA
CCTGGACAGGGGGAACATGAGCAAGCCGACCCTGTCGACTGACGGAACTC
AGGTATTTTGTGTTGCTGTCGGCGCTGGTGTTGGTGGTAGATGACGATGA
TTAGTGATTGTTGTTGTTGGTGGTAGTGTCACGATGTGGTTGATGTTCGT
GGAAATTTGTTGGTGGTGGAAGTGGCGGTGGTGGTGCAGTGGTCGGTCTT
GTTTTGTCTGTTGCTGTGGACGGTGGTGGTTGTGTTGTGTCCGGCAAACA
CGGCAAGGCTGCCATGCGTATTCGAGAAAGGTCGGTGCTCCCCCTATGGC
TACCACTGCTATATGGTCGAGCGCACGAGTAAATGACACAAATAGCTCAT
GGGTTGGTGCTGCTGTCACGCGTTGTTGTAGAATATCAAAGCGGCAGTAG
TGCCCCCACCCCTAGCAAGCAAAAAATTTCCAGGGTTGCCCTTCTCCGGC
TAAAAGACTCTTAGCGTTGTTACTTGTGTGTGCTTCAGCATATACCACCC
GCGCGTTCTCCAACCTACCCCTGGACATCTGCCCGCTTGCCGCCTTGCAC
CGCAGTCGACCGACGAGAGCGATAACCCCGCAGCCGGTGGCGGCAGCCAC
CCCGCCAACGGCGGTCGGGGTAGGCTATCTGTCGCCGATGAGGACTTGGA
GGGAGGCCTGGACGAGGACTGGGGGCACGACGTGAATGTCATCGAGCTGC
AGAACAGATTACCTGACACAAGCAGCAGCAGGGGGGGGGGCAAAAGCAAG
CCCAAGTCAAAGCGGAGTAAAGGAGCGGCAGCGGCGGCAGCAGAGGTGGA
AGCGGCGGCGGTGGCGGCAGCGGCGCAAGAGGAGACAGCAGCGGCGGCGG
CGGCGGCCCCAAGTGGCACTGCTGCAAGCCAAGGCGTAGCTGGGGTGGCC
GTTTGAATGCATCAACGGTAAACCAGCCAAACGGCCTTTGGAGTGATTGC
AGGGAGGCGAAGCATCCTTCAGAGGTACACAGTGTAGACGTAGGTGTTGA
CACGCTGGTTGAGCGCGTTGACAAGTAACGGGTTGCCATCTTGTCTTGCT
CCTATTGAGTGCATGTTTTGCGCTGTTGGCCGCCTACCGGTATCCCGGGT
ACATACTATTATACTATATGCTTGAAGTAGGTGGTTTTGCCGGGAAGCAT
GTGTTCACTTTGAGGGGGTAGGAGGTGGTTCCGATCTAGACGGTGTATGT
GGGGGCGTTGTAGTGCAGGATGTGCGTGAGAGAGAGGGGTTATCAGTCAG
TTTTTCCTAGTGTTTTTTCTTTAATGGGGAAGGTGGCACGCCGACAGGGC
GAACACCTATACAAGCGTTGCTGTGTCCGTATGGTATGGCAGAGTACAGC
TGGATTTACAGGTAGAGAGTGAAGTTATGTATGTTGGGGAGTGCGGTATT
GCGCTGCTCAACGTGATTTTGTCAGGTGAACAGCACCTCGTAGCCTCTTT
TGCACGCGCAAAGGTGGAGATGTCAATACCGAAAACGAGTTGAGTGTCAA
TACTTCAATACTGAAACGGGTTTGCCGCCATTAGATAATTTCCCTAGTTG
GTTGTCCGCCCGTTGCCCGGACACTTGGTATACCAGTATAATTCAGCACC
ACACCGTCCCATATACCGGGGTATATATACAGGATTTACCGGCAAAGTTG
TTTTAGATGGTAGGACAACACCCGTACAGAAAACTTTGGAGCGCCCTTCC
GCCGCCGAAAGTACTTCGGTGTATCCTTGAGGCTGAAAGGGGCTACAATA
TGGTCTAGGCCAGGTGTTTTGACAATTGACAATGCTTCCGTTCAGGCGGA
AGCTTTTTTTCCTTTGGCAAGTCGTACCAACGTTGATCCCGCCCACTGCT
GCTGCTGCTGCTGTGCTGCTGCTGCGGTCCCAACGCCCGGCATCAAGCAA
GCGGGCAACCCTTCCTGTCCACTGGCGAAGTATGTAGTCGACCCTACCGG
TTTGGTGCTTTTCTGTGTTGTTTTGCTGTGTGATTCAGTCTGTGTTGTAA
TCTAGTATAGAGGTGGTTTGTTTTACCGCCGTGTAACCCACGAGATAAGA
CCTAAGATAAGGCTTGAGAATTTGAACCGAAGAAAAACACAAGGTTGTTC
GAAAATCGCTTCTAGATATCCTGCGATGGTCAGAGTCTTGAGAACGCTTC
GGCAGCAGAAAATATCACTTGGGATTAGCGGAGGGGAGAAAAAATGGGAC
ACCTAAAAACCTAACGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1117:15437..23703+

>mRNA_Ecto-sp9_F_contig1117.1007.1 ID=mRNA_Ecto-sp9_F_contig1117.1007.1|Name=mRNA_Ecto-sp9_F_contig1117.1007.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2898bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1117:15437..23703+ (Ectocarpus species9 EcSCA_722f female)
ATGGGTTCGGGAGGAGCCGCAGCGTGGGTGGAGAGTCCGCTGGCACTCGT
GTTAGCCGTGTGCGCATCCATGGGTTCGGGAGGAGCCGCAGCGTGGGTGG
AGAGTCCGCTGGCACTCGTGTTAGCCGTGTGCGCATCCGTGCTGGCGTTG
GCGCTCGGCAGCCGAAACATGCTACTGCACGCGCGCAACTACAACTTCCC
TCGGACGCAGAAGTACATATTCCGCATTCTCATCGTGGTTCCGGTCTACG
CCATCTGTTCGTGCATCGCCATCATCGGCTCCACGTGCTGGCGTTGGCGC
TCGGCAGCCGAAACATGCTACTGCACGCGCGCAACTACAACTTCCCTCGG
ACGCAGAAGTACATATTCCGCATTCTCATCGTGGTTCCGGTCTACGCCAT
CTGTTCGTGCATCGCCATCATCGGCTCCACAGGCGACGTGGTTGTGGTGG
CCTTGATCGTTCGCGACTGCTACGAGGCCTTCGTTGTGTACTCTTTTCTT
ACCCTCATCCTCGAGCACGCAGGGGGCGACTACAACTGCATCGAGCAGAT
CAAGCACCTGCCACCGAGGCGACGTGGTTGTGGTGGCCTTGATCGTTCGC
GACTGCTACGAGGCCTTCGTTGTGTACTCTTTTCTTACCCTCATCCTCGA
GCACGCAGGGGGCGACTACAACTGCATCGAGCAGATCAAGCACCTGCCAC
CGGTGCCGCACCCTTTCCCACTGTGCTGCTTGGCTCGTGTGCGTCGGGAC
GGCACCCTCCTCCGCCTGTCGAAGCAATCGACCCTGCAGTTCGTGGTCGT
GAAGCCGACCATGGCCATCCTTAGTCTTCTCGCCCTCGCGCTTGGGCAGT
ACTACTCCGACTCGTTCCAGGTGCCGCACCCTTTCCCACTGTGCTGCTTG
GCTCGTGTGCGTCGGGACGGCACCCTCCTCCGCCTGTCGAAGCAATCGAC
CCTGCAGTTCGTGGTCGTGAAGCCGACCATGGCCATCCTTAGTCTTCTCG
CCCTCGCGCTTGGGCAGTACTACTCCGACTCGTTCCAGGTAACCCTTCTG
GTGGTGTACAACTCCAGCTACAGCGTGGCGCTCTACGGTTTGCTTATGTT
CTACAGGGCGTGCGGCCCCCTGCTGGCGCCGTTCAGGCCTGTTCAGAAGT
TTTTTGCCGTGAAGAGCATCATCTTCGCCACCTACTGGCAGAGCGTCGTC
GTGCACTTCATTCCCGGGGTAACCCTTCTGGTGGTGTACAACTCCAGCTA
CAGCGTGGCGCTCTACGGTTTGCTTATGTTCTACAGGGCGTGCGGCCCCC
TGCTGGCGCCGTTCAGGCCTGTTCAGAAGTTTTTTGCCGTGAAGAGCATC
ATCTTCGCCACCTACTGGCAGAGCGTCGTCGTGCACTTCATTCCCGGGCT
ATCCTCGGAGCAAATCCTCCTGTGGAACGACTGGCTAATCTGCATGGAGC
TGCTATCCTCGGAGCAAATCCTCCTGTGGAACGACTGGCTAATCTGCATG
GAGCTGGTGGCGTTTGCCCTGCTGCTGAACTCAGCGTTCCCGTGGCACGA
TTTCATCATGGAGCACCACGACAAGCCGGTGCTTGAAAACGTCCGGGAGA
TGATCAACGTCAGGTGGCGTTTGCCCTGCTGCTGAACTCAGCGTTCCCGT
GGCACGATTTCATCATGGAGCACCACGACAAGCCGGTGCTTGAAAACGTC
CGGGAGATGATCAACGTCAGGGACGTCTTCCAAGACGCGTACCACAGCTT
CATGCCGTCCTACCAAGACTACGTCGTGGCCAGGGACGACCTCGACCCCA
ACACGCCCGTCGCAGGCGGGGGGGGAGGGGTCGCACGCCCTGCGGGGGGT
AGCGGCGGGAAGAAGGAGTCGCGGGTGGTTCGCACTCGGACGTTTCTTAT
CGGCAACCTGGACAGGGGGAACATGAGCAAGCCGACCCTGTCGACTGACG
GAACTCAGGGACGTCTTCCAAGACGCGTACCACAGCTTCATGCCGTCCTA
CCAAGACTACGTCGTGGCCAGGGACGACCTCGACCCCAACACGCCCGTCG
CAGGCGGGGGGGGAGGGGTCGCACGCCCTGCGGGGGGTAGCGGCGGGAAG
AAGGAGTCGCGGGTGGTTCGCACTCGGACGTTTCTTATCGGCAACCTGGA
CAGGGGGAACATGAGCAAGCCGACCCTGTCGACTGACGGAACTCAGTCGA
CCGACGAGAGCGATAACCCCGCAGCCGGTGGCGGCAGCCACCCCGCCAAC
GGCGGTCGGGGTAGGCTATCTGTCGCCGATGAGGACTTGGAGGGAGGCCT
GGACGAGGACTGGGGGCACGACGTGAATGTCATCGAGCTGCAGAACAGAT
TACCTGACACAAGCAGCAGCAGGGGGGGGGGCAAAAGCAAGCCCAAGTCA
AAGCGGAGTAAAGGAGCGGCAGCGGCGGCAGCAGAGGTGGAAGCGGCGGC
GGTGGCGGCAGCGGCGCAAGAGGAGACAGCAGCGGCGGCGGCGGCGGCCC
CAAGTGGCACTGCTGCAAGCCAAGGCGTAGCTGGGGTGGCCGTTTGATCG
ACCGACGAGAGCGATAACCCCGCAGCCGGTGGCGGCAGCCACCCCGCCAA
CGGCGGTCGGGGTAGGCTATCTGTCGCCGATGAGGACTTGGAGGGAGGCC
TGGACGAGGACTGGGGGCACGACGTGAATGTCATCGAGCTGCAGAACAGA
TTACCTGACACAAGCAGCAGCAGGGGGGGGGGCAAAAGCAAGCCCAAGTC
AAAGCGGAGTAAAGGAGCGGCAGCGGCGGCAGCAGAGGTGGAAGCGGCGG
CGGTGGCGGCAGCGGCGCAAGAGGAGACAGCAGCGGCGGCGGCGGCGGCC
CCAAGTGGCACTGCTGCAAGCCAAGGCGTAGCTGGGGTGGCCGTTTGA
back to top