mRNA_Ecto-sp9_F_contig1111.963.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1111.963.1
Unique NamemRNA_Ecto-sp9_F_contig1111.963.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1111.963.1 vs.
Match: Protein (transport protein SEC23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCK6_ECTSI)

HSP 1 Score: 566 bits (1460), Expect = 1.020e-196
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 1
Query:    1 FVTQYQQAGGRFRLRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQGPPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAAFRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNTTDGSQGQAIFTDDVSLRVFMEHLMKLSTQS 840
            FVTQYQQAGGRFRLRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQGPPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAAFRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNTTDGSQGQAIFTDDVSLRVFMEHLMKLSTQS
Sbjct:  504 FVTQYQQAGGRFRLRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQGPPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAAFRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNTTDGSQGQAIFTDDVSLRVFMEHLMKLSTQS 783          
BLAST of mRNA_Ecto-sp9_F_contig1111.963.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSI2_9STRA)

HSP 1 Score: 429 bits (1103), Expect = 1.550e-147
Identity = 205/280 (73.21%), Postives = 237/280 (84.64%), Query Frame = 1
Query:    1 FVTQYQQAGGRFRLRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQGPPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAAFRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNTTDGSQGQAIFTDDVSLRVFMEHLMKLSTQS 840
            F+T+YQ   GR R+R+TT+CG WHSDPND+ P+   +DQ+AAA+L AR+AVHRTETE+V D++ W+DRSLIRL AKFA Y  D P SFRL   FS+YPQ+MFHLRRS FLQLFNSSPDEASYYR IL REN ++SLVM+QP+LLSYSF GPP P +LD+ SVRPDTILLLDTFFHVV+FHGETI AWRE  Y + EEHA+FRQLLEAPQ DAQ+IM SR PVPRYIVCDQHKSEARFL++KLNPSVTH+T +G  G  +FTDDVSLRVFMEHLMKLS QS
Sbjct:  155 FLTRYQHMNGRTRVRSTTLCGPWHSDPNDVTPIRASFDQEAAAILTARLAVHRTETEDVGDVLMWVDRSLIRLAAKFADYRPDDPSSFRLPHAFSIYPQFMFHLRRSPFLQLFNSSPDEASYYRYILSRENTSNSLVMIQPTLLSYSFNGPPQPTLLDSQSVRPDTILLLDTFFHVVVFHGETIAAWREMKYHEQEEHASFRQLLEAPQDDAQLIMDSRFPVPRYIVCDQHKSEARFLMAKLNPSVTHHTGEGGGGAQVFTDDVSLRVFMEHLMKLSVQS 434          
BLAST of mRNA_Ecto-sp9_F_contig1111.963.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT42_9STRA)

HSP 1 Score: 438 bits (1127), Expect = 2.080e-146
Identity = 212/279 (75.99%), Postives = 239/279 (85.66%), Query Frame = 1
Query:    1 FVTQYQQAGGRFRLRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQGPPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAAFRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNTTDGSQGQAIFTDDVSLRVFMEHLMKLSTQ 837
            FVTQYQ   GR RLR+TT+CG WHSD   L P+   +DQ AAAVL AR+AV+RTETE+VADIMRWLDRSLIRLCAKFA+Y KD+P SFRL+ EFSMYPQ+MFHLRRSQFLQ FNSSPDE+SYYR IL REN  +S+VM+QPSLLSYSFQG P+P +LDA+SVR DTILLLDTFF VV+FHGETI AWREQGYQ+ EEH  FR LL APQ+DAQ+IM +R PVPR+IVCDQHKSE RFL++KLNPSVTHN+ DGS GQ IFTDDVSLRVFMEHLM LS Q
Sbjct:  512 FVTQYQHPNGRMRLRSTTICGLWHSDAQSLQPIAASFDQAAAAVLTARVAVYRTETEDVADIMRWLDRSLIRLCAKFAEYRKDEPNSFRLSREFSMYPQFMFHLRRSQFLQQFNSSPDESSYYRSILARENTNNSMVMIQPSLLSYSFQGRPMPVLLDASSVRQDTILLLDTFFQVVVFHGETIAAWREQGYQEQEEHVNFRNLLLAPQSDAQMIMDNRFPVPRFIVCDQHKSETRFLMAKLNPSVTHNSNDGSGGQQIFTDDVSLRVFMEHLMNLSVQ 790          
BLAST of mRNA_Ecto-sp9_F_contig1111.963.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3YQE8_9STRA)

HSP 1 Score: 437 bits (1125), Expect = 3.330e-146
Identity = 208/279 (74.55%), Postives = 238/279 (85.30%), Query Frame = 1
Query:    4 VTQYQQAGGRFRLRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQGPPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAAFRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNTTDGSQGQAIFTDDVSLRVFMEHLMKLSTQS 840
            +T YQ A GR RLRATT+CG WH+D  D+ PL R +DQ+ AAVLMARIA HRT+TEEV DI+RWLDRSLIRLCAKFA+Y KD+  SFRL+ EFS+YPQ+MFHLRRSQFLQLFN+SPDE+SYYR +L REN  +SLVM+QPSLLSYSF GPP P +LDA SV PDTILLLDTFFHVV+FHGE +  WR+QGYQD+ EH  F+ LL APQA+AQ IM+ R PVPRYIVCDQHKSEARF+I+KLNPSVTHNT DGS G+ IFTDDVSLRVFMEHLMKL+ QS
Sbjct:  504 ITTYQHASGRQRLRATTLCGPWHNDTKDMSPLARSFDQETAAVLMARIATHRTDTEEVPDILRWLDRSLIRLCAKFAEYRKDEAASFRLSPEFSIYPQFMFHLRRSQFLQLFNTSPDESSYYRSVLMRENTTNSLVMIQPSLLSYSFNGPPTPVLLDAESVNPDTILLLDTFFHVVVFHGEKMAMWRDQGYQDNPEHVHFKNLLIAPQAEAQRIMEQRFPVPRYIVCDQHKSEARFVIAKLNPSVTHNTNDGSAGERIFTDDVSLRVFMEHLMKLAVQS 782          
BLAST of mRNA_Ecto-sp9_F_contig1111.963.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HLG5_9STRA)

HSP 1 Score: 428 bits (1101), Expect = 7.380e-146
Identity = 205/280 (73.21%), Postives = 232/280 (82.86%), Query Frame = 1
Query:    1 FVTQYQQAGGRFRLRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQGPPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAAFRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNTTDGSQGQAIFTDDVSLRVFMEHLMKLSTQS 840
            F+T YQ + GRF LR TTVCGGWHSDP D  P+   +DQ+AA VLMAR+AVHR  TE++AD+ RWLDRSLIRL AKFA Y KD   SFRL  EFS+YPQ+MFHLRRS+FLQ FNSSPDE + YR IL REN  +SL+MLQPSLLSYSF GPP P +LDA SVRPDTILLLDTFFHV++FHGETI AW++QGYQ  EEH  FR LLEAPQ DAQ+IM +R PVPRYIVCDQHKSEARFL++ LNPSVTHN+ D + GQAIFTDDVSLRVFMEHLMKL+ QS
Sbjct:  251 FLTTYQASNGRFHLRVTTVCGGWHSDPADHAPIAASFDQEAATVLMARLAVHRCLTEDIADVQRWLDRSLIRLAAKFANYRKDDAASFRLPQEFSIYPQFMFHLRRSKFLQSFNSSPDEQAVYRHILTRENTTNSLIMLQPSLLSYSFHGPPQPVLLDATSVRPDTILLLDTFFHVIVFHGETIAAWKQQGYQHQEEHVNFRNLLEAPQNDAQMIMNNRFPVPRYIVCDQHKSEARFLLAMLNPSVTHNSADSAAGQAIFTDDVSLRVFMEHLMKLAVQS 530          
BLAST of mRNA_Ecto-sp9_F_contig1111.963.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W7G0_9STRA)

HSP 1 Score: 434 bits (1117), Expect = 3.700e-145
Identity = 205/280 (73.21%), Postives = 238/280 (85.00%), Query Frame = 1
Query:    1 FVTQYQQAGGRFRLRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQGPPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAAFRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNTTDGSQGQAIFTDDVSLRVFMEHLMKLSTQS 840
            F+T YQ A G+ RLR+TT+CGGWHSDP D  P+ R +DQ+AAAVLMAR+AV RT TEEVADI+RW+DRSLIRLCAKFA Y KD+P SFRL  EFS+YPQ+MFHLRRSQFLQLFN+SPDEA+YYR +L RE   +SLVM+QPSLLSYSF GPP PA LD ASV  DTILLLDTFFHV++FHGE +  WREQGYQ+H+EH  FR+LL APQ DAQ IM  R PVPR+I+CDQHKSE+RF+I+KLNPSVTHN++DGS  + IFTDDVSLRVFMEHLMKL+ QS
Sbjct:  490 FITTYQHANGKTRLRSTTLCGGWHSDPADSSPIGRSFDQEAAAVLMARVAVFRTSTEEVADILRWVDRSLIRLCAKFADYRKDEPNSFRLPPEFSIYPQFMFHLRRSQFLQLFNTSPDEAAYYRSVLMRETTTNSLVMIQPSLLSYSFNGPPQPAFLDIASVNADTILLLDTFFHVIVFHGERVAMWREQGYQNHDEHKHFRELLLAPQTDAQRIMDQRLPVPRFIMCDQHKSESRFVIAKLNPSVTHNSSDGSSAERIFTDDVSLRVFMEHLMKLAVQS 769          
BLAST of mRNA_Ecto-sp9_F_contig1111.963.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWM5_AURAN)

HSP 1 Score: 433 bits (1114), Expect = 1.170e-144
Identity = 206/280 (73.57%), Postives = 238/280 (85.00%), Query Frame = 1
Query:    1 FVTQYQQAGGRFRLRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQGPPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAAFRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNTTDGSQGQAIFTDDVSLRVFMEHLMKLSTQS 840
            F+TQYQ A GR+RLR+TT+CG W  DPND  P+ R +DQ+AAAVLMAR+AVHRTETEEV DI+RW+DRSLIRLCAKFA Y KD P SFRL  EF++YPQ++F+LRRSQFLQLFNSSPDEASYYR +L REN ++SLVM+QP+L+SYSFQ PP PAMLDA+SVRPD ILLLDTFF+V++FHGETI AWR+QGYQDHEEH  F+ LL  P  DA  IM +R PVPRYI+ DQHKSEARFLI KLNPSVTHN+TD   GQ I TDDVSL+VFMEHLMKLS +S
Sbjct:  494 FITQYQHANGRYRLRSTTLCGAWQPDPNDSAPVARSFDQEAAAVLMARVAVHRTETEEVPDILRWVDRSLIRLCAKFADYRKDDPSSFRLPHEFAVYPQFVFNLRRSQFLQLFNSSPDEASYYRMVLTRENASNSLVMIQPTLMSYSFQAPPQPAMLDASSVRPDVILLLDTFFYVIVFHGETIAAWRDQGYQDHEEHVHFKNLLHQPLEDANAIMDARFPVPRYIIADQHKSEARFLICKLNPSVTHNSTDIHAGQVIPTDDVSLKVFMEHLMKLSVES 773          
BLAST of mRNA_Ecto-sp9_F_contig1111.963.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CH11_9STRA)

HSP 1 Score: 411 bits (1057), Expect = 3.190e-143
Identity = 196/257 (76.26%), Postives = 221/257 (85.99%), Query Frame = 1
Query:   70 HSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQGPPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAAFRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNTTDGSQGQAIFTDDVSLRVFMEHLMKLSTQS 840
            H DPND  P+ R +DQ+A+AVLMARIA HRTETEEV DI+RW+DRSLIRLC+KFA Y KD P SFRL+ EF+MYPQ+MFHLRRSQFLQLFN+SPDE++YYR +L REN  +SLVM+QPSLLSYSFQG P P +LDAASV PDTILLLDTFFHVV+FHGE I  WR+QGYQDHEEH  F+ LL APQ DAQ IM  R PVPRYIVCDQHKSEARF+I+KLNPS+THNT DGS G+ IFTDDVSLRVFMEHLMKL+ QS
Sbjct:    1 HGDPNDASPIARSFDQEASAVLMARIATHRTETEEVPDILRWVDRSLIRLCSKFADYRKDDPGSFRLSQEFAMYPQFMFHLRRSQFLQLFNTSPDESAYYRSVLVRENTTNSLVMIQPSLLSYSFQGTPSPVLLDAASVSPDTILLLDTFFHVVVFHGEKIAMWRDQGYQDHEEHIHFKNLLIAPQTDAQRIMDQRFPVPRYIVCDQHKSEARFVIAKLNPSLTHNTNDGSAGERIFTDDVSLRVFMEHLMKLAVQS 257          
BLAST of mRNA_Ecto-sp9_F_contig1111.963.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JTH4_9STRA)

HSP 1 Score: 429 bits (1103), Expect = 1.980e-142
Identity = 205/280 (73.21%), Postives = 237/280 (84.64%), Query Frame = 1
Query:    1 FVTQYQQAGGRFRLRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQGPPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAAFRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNTTDGSQGQAIFTDDVSLRVFMEHLMKLSTQS 840
            F+T+YQ   GR R+R+TT+CG WHSDPND+ P+   +DQ+AAA+L AR+AVHRTETE+V D++ W+DRSLIRL AKFA Y  D P SFRL   FS+YPQ+MFHLRRS FLQLFNSSPDEASYYR IL REN ++SLVM+QP+LLSYSF GPP P +LD+ SVRPDTILLLDTFFHVV+FHGETI AWRE  Y + EEHA+FRQLLEAPQ DAQ+IM SR PVPRYIVCDQHKSEARFL++KLNPSVTH+T +G  G  +FTDDVSLRVFMEHLMKLS QS
Sbjct:  543 FLTRYQHMNGRTRVRSTTLCGPWHSDPNDVTPIRASFDQEAAAILTARLAVHRTETEDVGDVLMWVDRSLIRLAAKFADYRPDDPSSFRLPHAFSIYPQFMFHLRRSPFLQLFNSSPDEASYYRYILSRENTSNSLVMIQPTLLSYSFNGPPQPTLLDSQSVRPDTILLLDTFFHVVVFHGETIAAWREMKYHEQEEHASFRQLLEAPQDDAQLIMDSRFPVPRYIVCDQHKSEARFLMAKLNPSVTHHTGEGGGGAQVFTDDVSLRVFMEHLMKLSVQS 822          
BLAST of mRNA_Ecto-sp9_F_contig1111.963.1 vs.
Match: Protein (transport protein SEC23 n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I581_9STRA)

HSP 1 Score: 412 bits (1059), Expect = 1.070e-141
Identity = 202/296 (68.24%), Postives = 238/296 (80.41%), Query Frame = 1
Query:    1 FVTQYQQAGGRFRLRATTVCGGWHS---------------DPNDLGPLVRGYDQQAAAVLMARIAVHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQGPPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAAFRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNTTDGSQGQA-IFTDDVSLRVFMEHLMKLSTQS 840
            F+T+YQ + G+ R+R+TT+CG WH+                     P+   +DQ+A+AVL AR+AVHRTE+E+VAD++RW+DRSLIRLC KFA Y  D P SFRL+ EFS+YPQ+MFHLRRSQFLQLFNSSPDEA+YYR +L REN  +SLVM+QP+LLSYSF GPP PA+LDA SVRPDTILLLDTFFHVV+FHGETI AWREQ Y + EEHAAFR LLEAPQADAQ+IM +R PVPRYIVCDQHKSEARFL++KLNPS THNT +G  G   +FTDDVSLRVFMEHLMKL+ QS
Sbjct:   82 FLTRYQHSNGKTRIRSTTLCGPWHNAEGADQRAAQXXXXXXEGANNPVRLSFDQEASAVLTARVAVHRTESEDVADVLRWVDRSLIRLCTKFADYRPDDPNSFRLSHEFSLYPQFMFHLRRSQFLQLFNSSPDEAAYYRYVLTRENTTNSLVMIQPTLLSYSFNGPPQPALLDAQSVRPDTILLLDTFFHVVVFHGETIAAWREQKYHEQEEHAAFRDLLEAPQADAQMIMDARFPVPRYIVCDQHKSEARFLMAKLNPSCTHNTPEGGGGGTQVFTDDVSLRVFMEHLMKLAVQS 377          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1111.963.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Protein1.020e-196100.00transport protein SEC23 n=2 Tax=Ectocarpus TaxID=2... [more]
Protein1.550e-14773.21transport protein SEC23 n=1 Tax=Leptocylindrus dan... [more]
Protein2.080e-14675.99transport protein SEC23 n=1 Tax=Tribonema minus Ta... [more]
Protein3.330e-14674.55transport protein SEC23 n=1 Tax=Dictyocha speculum... [more]
Protein7.380e-14673.21transport protein SEC23 n=1 Tax=Spumella elongata ... [more]
Protein3.700e-14573.21transport protein SEC23 n=1 Tax=Rhizochromulina ma... [more]
Protein1.170e-14473.57transport protein SEC23 n=1 Tax=Aureococcus anopha... [more]
Protein3.190e-14376.26transport protein SEC23 n=1 Tax=Florenciella parvu... [more]
Protein1.980e-14273.21transport protein SEC23 n=1 Tax=Leptocylindrus dan... [more]
Protein1.070e-14168.24transport protein SEC23 n=1 Tax=Helicotheca tamesi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1111contigEcto-sp9_F_contig1111:22611..26387 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score567.4
Seed ortholog evalue3.7e-159
Seed eggNOG ortholog2880.D8LCK6
Preferred nameSEC23A
KEGG koko:K14006
KEGG Pathwayko04141,map04141
KEGG ModuleM00404
GOsGO:0000139,GO:0001501,GO:0002164,GO:0002165,GO:0002168,GO:0002376,GO:0002474,GO:0002478,GO:0002495,GO:0002504,GO:0003002,GO:0003330,GO:0003331,GO:0003400,GO:0003674,GO:0005096,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005795,GO:0005798,GO:0005829,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006914,GO:0006950,GO:0006996,GO:0007029,GO:0007030,GO:0007163,GO:0007275,GO:0007389,GO:0007399,GO:0007424,GO:0007517,GO:0007591,GO:0008047,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0008360,GO:0008363,GO:0009056,GO:0009057,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009887,GO:0009888,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0010720,GO:0010769,GO:0010770,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016203,GO:0016236,GO:0019538,GO:0019882,GO:0019884,GO:0019886,GO:0019898,GO:0019941,GO:0022008,GO:0022407,GO:0022409,GO:0022603,GO:0022604,GO:0022607,GO:0030011,GO:0030117,GO:0030120,GO:0030127,GO:0030133,GO:0030134,GO:0030135,GO:0030154,GO:0030155,GO:0030163,GO:0030198,GO:0030234,GO:0030433,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0030695,GO:0031090,GO:0031344,GO:0031346,GO:0031410,GO:0031982,GO:0031984,GO:0032386,GO:0032501,GO:0032502,GO:0032879,GO:0032991,GO:0033036,GO:0033043,GO:0033333,GO:0033334,GO:0033339,GO:0033554,GO:0034394,GO:0034613,GO:0034622,GO:0034976,GO:0035017,GO:0035107,GO:0035138,GO:0035148,GO:0035149,GO:0035152,GO:0035239,GO:0035293,GO:0035295,GO:0035459,GO:0036503,GO:0040003,GO:0042175,GO:0042221,GO:0042303,GO:0042335,GO:0042337,GO:0042886,GO:0043009,GO:0043062,GO:0043085,GO:0043087,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043547,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045785,GO:0046872,GO:0046907,GO:0046914,GO:0048002,GO:0048070,GO:0048079,GO:0048081,GO:0048087,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048209,GO:0048471,GO:0048475,GO:0048513,GO:0048518,GO:0048522,GO:0048562,GO:0048568,GO:0048598,GO:0048646,GO:0048699,GO:0048701,GO:0048702,GO:0048704,GO:0048705,GO:0048706,GO:0048731,GO:0048736,GO:0048814,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050773,GO:0050775,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051130,GO:0051179,GO:0051216,GO:0051234,GO:0051239,GO:0051240,GO:0051336,GO:0051345,GO:0051603,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051668,GO:0051716,GO:0051960,GO:0051962,GO:0060284,GO:0060341,GO:0060538,GO:0060541,GO:0060589,GO:0060627,GO:0060628,GO:0061024,GO:0061061,GO:0061448,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070971,GO:0071702,GO:0071704,GO:0071705,GO:0071711,GO:0071840,GO:0072657,GO:0072659,GO:0090110,GO:0090113,GO:0090114,GO:0097708,GO:0098588,GO:0098772,GO:0098791,GO:0098796,GO:0098805,GO:0098827,GO:0120035,GO:1900006,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1903053,GO:1903055,GO:1903530,GO:1903532,GO:1904888,GO:1990778,GO:2000026
EggNOG free text desc.COPII-coated vesicle budding
EggNOG OGsCOG5047@1,KOG1986@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131
Hectar predicted targeting categoryother localisation
Exons6
Model size843
Cds size843
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1111.963.1prot_Ecto-sp9_F_contig1111.963.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1111 22611..26387 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928351.2695527-CDS-Ecto-sp9_F_contig1111:22610..227821622928351.2695527-CDS-Ecto-sp9_F_contig1111:22610..22782Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1111 22611..22782 -
1692277842.1749249-CDS-Ecto-sp9_F_contig1111:22610..227821692277842.1749249-CDS-Ecto-sp9_F_contig1111:22610..22782Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1111 22611..22782 -
1622928351.281937-CDS-Ecto-sp9_F_contig1111:23701..238001622928351.281937-CDS-Ecto-sp9_F_contig1111:23701..23800Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1111 23702..23800 -
1692277842.196009-CDS-Ecto-sp9_F_contig1111:23701..238001692277842.196009-CDS-Ecto-sp9_F_contig1111:23701..23800Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1111 23702..23800 -
1622928351.2948582-CDS-Ecto-sp9_F_contig1111:24451..245761622928351.2948582-CDS-Ecto-sp9_F_contig1111:24451..24576Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1111 24452..24576 -
1692277842.2079842-CDS-Ecto-sp9_F_contig1111:24451..245761692277842.2079842-CDS-Ecto-sp9_F_contig1111:24451..24576Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1111 24452..24576 -
1622928351.3128073-CDS-Ecto-sp9_F_contig1111:25024..251381622928351.3128073-CDS-Ecto-sp9_F_contig1111:25024..25138Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1111 25025..25138 -
1692277842.21935-CDS-Ecto-sp9_F_contig1111:25024..251381692277842.21935-CDS-Ecto-sp9_F_contig1111:25024..25138Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1111 25025..25138 -
1622928351.3271604-CDS-Ecto-sp9_F_contig1111:25473..256321622928351.3271604-CDS-Ecto-sp9_F_contig1111:25473..25632Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1111 25474..25632 -
1692277842.2307796-CDS-Ecto-sp9_F_contig1111:25473..256321692277842.2307796-CDS-Ecto-sp9_F_contig1111:25473..25632Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1111 25474..25632 -
1622928351.3373048-CDS-Ecto-sp9_F_contig1111:26213..263871622928351.3373048-CDS-Ecto-sp9_F_contig1111:26213..26387Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1111 26214..26387 -
1692277842.2398503-CDS-Ecto-sp9_F_contig1111:26213..263871692277842.2398503-CDS-Ecto-sp9_F_contig1111:26213..26387Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1111 26214..26387 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1111.963.1

>prot_Ecto-sp9_F_contig1111.963.1 ID=prot_Ecto-sp9_F_contig1111.963.1|Name=mRNA_Ecto-sp9_F_contig1111.963.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=281bp
FVTQYQQAGGRFRLRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIA
VHRTETEEVADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQY
MFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQG
PPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAA
FRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNT
TDGSQGQAIFTDDVSLRVFMEHLMKLSTQS*
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mRNA from alignment at Ecto-sp9_F_contig1111:22611..26387-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1111.963.1 ID=mRNA_Ecto-sp9_F_contig1111.963.1|Name=mRNA_Ecto-sp9_F_contig1111.963.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3777bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1111:22611..26387- (Ectocarpus species9 EcSCA_722f female)
TTCGTGACGCAGTACCAGCAGGCGGGGGGCAGGTTCCGCCTGAGGGCCAC CACTGTGTGCGGGGGGTGGCATAGCGACCCCAACGATCTCGGTCCGTTGG TGAGGGGCTACGACCAGCAGGCGGCAGCGGTGCTGATGGCGCGCATCGCC GTGCACCGGACTGAGACGGAGGAGGTGCGGAATGTTTGGTTGTTGTTGTG CGTGTTGCCGTCGCCCTTGATGCGTTGTTGTTGTTGTTGCTGTTGCTGAT GTTGGTGATATATTGTGGGTTGTTGCAGTAGTTTGCTGTTGTTATTGCTG ATGTTGGTGGCATCGTCGACGTTTCGTTGTTGTTGTTGTCATTGTTGATG TTTTGGTTGGAAATTTGGTATCGATATCAGTTTTCTCTAATTTGTTCTTG TTAAGCCGTTGCTTTGCGGATATTGGGGGGCATCGTTGGCGTTTTGTTGG CGTTGTTGTACGCCGCCGCCGTCCCGTTGCAGAAGAAGTACATGTACGCC TTTGACAGACAAGGAGTGTTTGCCGTCGTGCTGATGGCGGTGGCATTGTG AGACGCCTGCTCGGTGTTCTTGGTTTGGTCGTCGTTGATGGTTGTTGTCA ATTGTTCATCTCGTCCGTAACCGTTCTGGCCTCTCGTGCAGTGTATATTA ATAGTACCGCTGCACCTGTTCTGCAACATGCCGCACAGATCCGGGATTTA CCTTTTTTTTTGTTTTTTTGTCCTTTTTTTTTGTTCTGTGTTATTCTTCC AAAAGGTGGCCGACATCATGCGGTGGTTGGACCGCAGCCTGATCCGCCTG TGCGCCAAGTTCGCGCAGTACACCAAGGACAAGCCCGAGTCCTTCCGGCT GGCCAGCGAGTTCAGCATGTACCCGCAGTACATGTTCCACCTCAGACGCT CCCAGTTCCTGCAGGTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG CTGCTGCTGCTGTTGTTGTTTTCGTTGCTTCAACACGCCGACGGTGAACA GCAACATGCAGCGAGCCCAACTCCACGCGAAATACATTGATCGCTGTTTC GTTCCAACTGCCCCCCTGCCCAGTTTTTCAGCAGGGCTTGGACTCACAAA TCCGTGAACAAACCGGTTGACTGCTGCCGCCACCGCGGCTGCTCTTTCCT AGCACATACACTTGTCTTTGTTGTTGAAATACGCTCGATAACACCCCCCC TCCCCCATCCCGTTGTACCCCTTCGCAACTCACGGAACCCCCCTCCCAGT TGTTCAACTCGTCGCCGGACGAAGCCAGCTACTACAGGGGAATCCTCTGC CGAGAGAACGTGGCGTCGTCTCTGGTGATGCTGCAGCCCAGCCTCCTCTC CTACTCGTTCCAGGTGTCCACACATATGATTTGGCGTTTCAACCAATGTT CTGGTGTTCAGGTATCCACACATACATGGTACACTGTCAAGACGAAGAAT GGTCTTGCAATACGCATATGATTTGGCGTTTCAATCGATGTTCTGGGGTC TCGCGTCCGTCATGGGCGCGATAACGATTGATACGCCGCCAGACCGGGCA AAAGTTTTGCAGGGCGAAGTTTTGGGACTCATACCGATCCCTGCTGTATT TTACTGTTTTTTTTGTTTCGTGCCATATGGTAGCTCCGATGGGTGGGCTC TCGGTCTCAAACCGTGTGTACTCCTTCATGCACATGCGGGCCATCGAAAG GGGGACCGGCAGTGAGGAACCGTGGGTGTTTCTGTCGTTGACATCGTCAT CGAGTTACAGCGGTGGATGACCCCTTTCCCCTCGCATTCCTGTGACCCCC TCCCCCCAAAGGGCCCGCCGGTGCCCGCGATGCTGGACGCGGCCTCGGTA CGGCCGGACACGATCCTGCTGCTGGACACCTTCTTCCACGTCGTTATCTT CCACGGAGAGACCATCGGGGCGTGGAGGGAGCAAGGGTGGGTTTGTTTGG AGTCTCGCATGCTTAGGCGATAGACTTGACGTCTTGTTTGGAGGCTCGCA TGGATAAACACTACACTTGCCGTTTTTTCAAGTCTCGCATGGATAAACGA GAGACTTTGCGCTTTTTCTTCCAAGTGTAGCATGGATGAACGAAAGACTT GGCGGTTTACTTTGGGTCTCGCATGCTTAAGCAACAGACTTGGCGTTTAC TTGGAGTCTCGCGTAGATAAACGGAAGACGTCGCGTTTTTTTTGGAGTCT CTCATGCATCAACATTAGACATTGCGTTTTGTTGAAGTCTCGCATGCATA TACAAGAGCCTTGTCGTGTGTCTATGGTATCTGCCGCTCTGGCGCTGCGG GGAGCGTGTAAAGCTCGTTGTTGTCAAAACGGCTAAATGTAGAGATGAGC CATATCGGAAAAAGCGTAGAGATAGATCAATCAGAAAACAACCGGGGTGC TGTGTGTGACAGTATTGGGGGCACTGCTGTGTCGAGGGTCGGCAGCAAAC TAGCGTAGGTCCACGTCGTACAGGCAGAATCCCTCTCGCATTTCTTCTGC AAGCCCCCCCAACGTTCACTGCCCACCACTCCGCCCCTTACGAATCGTGT CGATGATGACTTGATGGCTATTGTACGACGATCCCAGGTACCAAGACCAC GAGGAGCACGCGGCTTTCCGGCAGCTGCTGGAGGCGCCCCAGGCGGACGC GCAGATCATCATGCAGAGCCGCTGCCCAGTGCCGAGGTGTGTGTGTGTTT TCTTTATTAGCATCGACCGCGCTAACCGGCTGACAAATGAAAAGACGTCG GTCTCCGTGCGGTTGAATGCACAACATTCTTCGTTAAGGTCATGATCTGG GACCTCCGTGAGGGGGCAGGCTCTGTGTGTTTGTGTGTGTGGTTCAACAT CAACGGCGCCGTAGCCGGCTGACCATTGAAGCATGTGTGGTGTGTTGCGT GTGTCTTCCGGCCTTACGATCAACGATCAAGGGACACGTATATTTTGTTT TTTTGGTGTGAAGCTGGCGTGTGGGTAGTTGGCAACATGGGGCGGTGTTC GCGTTTACTGCTGTGGCATTGTTGGTTGACGTACGTGTCGGGAGGGGGAG GGGCTTATGTGTGTGGCAGGATCTTCACAAAGTTAGCGCCGCTTGTTTTT GTTTTTTCCCTCCCGCTTCGCCCTACCCCAGAGACAGCCGTATCTGCATC CATCACGTGTGACTTGGTACACCTCGATTCACAAGCTCCATTCTTCCTTT TCTGTGCATATGATCTCTGCGTTTGTGCGAAGGCACCCCTTAATCTGTAA TCGGCAACGTCAGCGATCTCCGTGCCGTCTGTCCCCGCCTTGGCTGTATT ATTAACCTCTTCGGTGTTGGTGTTGCCGTTCTTACGGCTCGCGTCGCGTC TGTACAAGAAACGTGTTCGTTCGCCGGCGGTCGCATGTTTGCACGGTGGC GGCGCGATCTAACACGCTCATGTATTTTGGCATGTCTATTTTTTTTTTAT CGTTCGCCTTTACCAATCACTATCTGTGTTTCATTTTTGAAAACAAAAAC AAAAATCGAAAATTCATCCTGTTTCCCTTGTTGCGGCGCATGATACGGTG CGATGCGCGGCGCACTCTCGTGCTCGCTCGCTCGCTTTCGCGGGCGCTCA CACAGGTACATCGTGTGCGATCAGCACAAGTCGGAGGCTCGCTTCCTCAT CTCCAAGCTCAACCCTTCGGTGACTCACAACACGACCGACGGCTCCCAAG GGCAGGCCATCTTCACGGATGACGTCAGCCTTCGCGTCTTCATGGAGCAC CTCATGAAGCTGTCCACTCAGTCGTAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1111:22611..26387-

>mRNA_Ecto-sp9_F_contig1111.963.1 ID=mRNA_Ecto-sp9_F_contig1111.963.1|Name=mRNA_Ecto-sp9_F_contig1111.963.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1686bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1111:22611..26387- (Ectocarpus species9 EcSCA_722f female)
TTCGTGACGCAGTACCAGCAGGCGGGGGGCAGGTTCCGCCTGAGGGCCAC
CACTGTGTGCGGGGGGTGGCATAGCGACCCCAACGATCTCGGTCCGTTGG
TGAGGGGCTACGACCAGCAGGCGGCAGCGGTGCTGATGGCGCGCATCGCC
GTGCACCGGACTGAGACGGAGGAGTTCGTGACGCAGTACCAGCAGGCGGG
GGGCAGGTTCCGCCTGAGGGCCACCACTGTGTGCGGGGGGTGGCATAGCG
ACCCCAACGATCTCGGTCCGTTGGTGAGGGGCTACGACCAGCAGGCGGCA
GCGGTGCTGATGGCGCGCATCGCCGTGCACCGGACTGAGACGGAGGAGGT
GGCCGACATCATGCGGTGGTTGGACCGCAGCCTGATCCGCCTGTGCGCCA
AGTTCGCGCAGTACACCAAGGACAAGCCCGAGTCCTTCCGGCTGGCCAGC
GAGTTCAGCATGTACCCGCAGTACATGTTCCACCTCAGACGCTCCCAGTT
CCTGCAGGTGGCCGACATCATGCGGTGGTTGGACCGCAGCCTGATCCGCC
TGTGCGCCAAGTTCGCGCAGTACACCAAGGACAAGCCCGAGTCCTTCCGG
CTGGCCAGCGAGTTCAGCATGTACCCGCAGTACATGTTCCACCTCAGACG
CTCCCAGTTCCTGCAGTTGTTCAACTCGTCGCCGGACGAAGCCAGCTACT
ACAGGGGAATCCTCTGCCGAGAGAACGTGGCGTCGTCTCTGGTGATGCTG
CAGCCCAGCCTCCTCTCCTACTCGTTCCAGTTGTTCAACTCGTCGCCGGA
CGAAGCCAGCTACTACAGGGGAATCCTCTGCCGAGAGAACGTGGCGTCGT
CTCTGGTGATGCTGCAGCCCAGCCTCCTCTCCTACTCGTTCCAGGGCCCG
CCGGTGCCCGCGATGCTGGACGCGGCCTCGGTACGGCCGGACACGATCCT
GCTGCTGGACACCTTCTTCCACGTCGTTATCTTCCACGGAGAGACCATCG
GGGCGTGGAGGGAGCAAGGGGCCCGCCGGTGCCCGCGATGCTGGACGCGG
CCTCGGTACGGCCGGACACGATCCTGCTGCTGGACACCTTCTTCCACGTC
GTTATCTTCCACGGAGAGACCATCGGGGCGTGGAGGGAGCAAGGGTACCA
AGACCACGAGGAGCACGCGGCTTTCCGGCAGCTGCTGGAGGCGCCCCAGG
CGGACGCGCAGATCATCATGCAGAGCCGCTGCCCAGTGCCGAGGTACCAA
GACCACGAGGAGCACGCGGCTTTCCGGCAGCTGCTGGAGGCGCCCCAGGC
GGACGCGCAGATCATCATGCAGAGCCGCTGCCCAGTGCCGAGGTACATCG
TGTGCGATCAGCACAAGTCGGAGGCTCGCTTCCTCATCTCCAAGCTCAAC
CCTTCGGTGACTCACAACACGACCGACGGCTCCCAAGGGCAGGCCATCTT
CACGGATGACGTCAGCCTTCGCGTCTTCATGGAGCACCTCATGAAGCTGT
CCACTCAGTCGTAGGTACATCGTGTGCGATCAGCACAAGTCGGAGGCTCG
CTTCCTCATCTCCAAGCTCAACCCTTCGGTGACTCACAACACGACCGACG
GCTCCCAAGGGCAGGCCATCTTCACGGATGACGTCAGCCTTCGCGTCTTC
ATGGAGCACCTCATGAAGCTGTCCACTCAGTCGTAG
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