mRNA_Ecto-sp9_F_contig1103.906.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1103.906.1 vs.
Match: XRN_N (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZW9_9PHAE) HSP 1 Score: 1426 bits (3691), Expect = 0.000e+0 Identity = 732/759 (96.44%), Postives = 740/759 (97.50%), Query Frame = 1
Query: 1 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFNRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSAGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDIYDEFLEQEKARILEQAHLDQENEDIDSNLDEDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELSEFHDDSHSSGAWKVVYLDLAARQRTPPAPLPPSKDFPPLDSSRRSSSYKFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQGVLDLPYKKALNGSGKPEGGRRRRGPGGKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNGRGEDAAPDLPRRPPPEVAADVKARPSPFPSSARPDSRRSSMCLGKLATRRSHCRLLL 2277
QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFM+DVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSF+RCFQAYQALKRGKHR DNFL+DGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQG+LGDGVEIEVHDLSDEVSGSS GTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPD+YDEFLEQEKARILEQA LDQENEDIDSNLDEDSGAENGRE SRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELSEFHD +HSS AWKVVYLDL+ARQRTPPAP PPSKDFPPLDSSR S+SYKFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQGVLDLPYKKALNGSGKPEGGRRRRG GKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNGRGEDAAPDLPRRPPP VAADVKARPSPFPSSARPDSRRSSMCLGKLATRRSHCRLLL
Sbjct: 55 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMDDVASAMEYYAFQECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFSRCFQAYQALKRGKHR--------DNFLIDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGKLGDGVEIEVHDLSDEVSGSSGGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDLYDEFLEQEKARILEQAQLDQENEDIDSNLDEDSGAENGRERGSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKILKTCQNLMPQELSEFHDGAHSSCAWKVVYLDLSARQRTPPAPPPPSKDFPPLDSSRHSNSYKFQRIQVTSMSATSAPRNLPWSSASDSSSEEMQGVLDLPYKKALNGSGKPEGGRRRRGSAGKGARGPRGGAAPPKSAAWRKKSSAPRIRKSGKAGEGSDARRGTNGRGEDAAPDLPRRPPPAVAADVKARPSPFPSSARPDSRRSSMCLGKLATRRSHCRLLL 805
BLAST of mRNA_Ecto-sp9_F_contig1103.906.1 vs.
Match: DRBM (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8H5_9STRA) HSP 1 Score: 251 bits (642), Expect = 1.330e-67 Identity = 243/871 (27.90%), Postives = 346/871 (39.72%), Query Frame = 1
Query: 1 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQEC------------------------------------------------------------------------------------------------------------------------------TRPCYQG---------------------------VKFYISGANVPGEGELKCIDWLK---HMPKP-----------------------------------DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFNRCFQAYQALKRGKHRGVLLALPSD--NFLVDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIE--------VHDLSDEVSGSSAGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDIYDEFL---EQEKARILEQAH---------------------LDQENEDIDSNLDEDSGA-ENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWV--KLASE--------DKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPL----------LEALEWRGVSSGL-------DIAKILKTCQNLMPQELSEFHDDSHSSGAWKVV-YLDLAARQRTPPAPLPPSKDFPPLDSSRRSSSYKFQRIQVTSMSATSAPRNLPW 1851
QILHVA+R++ +E+ AI R F +++ LK PR+SVVFAFDGSAPLAKLL QR+RRE +R +Y+MSAL+++PGT FM A AM YYA+ RP Y+G V +Y+ A+V GEGELK +DW P+ +ES VIVGGDADL+LQGLALS+VKN F+ + S R+ S+W+V R LEAMFPG+S +R DL L++LNGNDYLPKVRGVSF RCF+ Y A K A P +F++D +++ W FL L +G + + G K ++ G+ +D+ E + + ++ V G T H +K AA +L+EL P++Y+++L ++ A++L A D D+D N DE S E E GK DV+++L GVLWN+ MY DG+ P+ YWRY RY+PSC D+ WV ++A E L ++A PV P LP+ +ACL M M+ G+ +P+RL+ L+ SP+ ++G+ DI +L + P+ L+ F + W V+ + + P LPP PPLD R ++ +M ATS+P W
Sbjct: 58 QILHVAVRRSANEEQAIARTFTEISQVLKTLEPRRSVVFAFDGSAPLAKLLTQRARREGGRRAERYQMSALNITPGTDFMRSAAEAMRYYAYTRLPGGTARLPGGTYNHTLXXXXXXXXXXXXXXXXXXXXAGVCVHDDITPXXXXXXXXXXXXXXXXXXXXPDGTQASKFGPGDKVWLDLGEPGAPQWTGPWAIQGRKGADDLVLTHHKGGARKVVSAALVRP-YRGDPPPGPRGTREGVXXXXXXXXXXXXXXVTYYMGTADVLGEGELKILDWAHLAGRRPRSLAALRTAXXXXXXXXXXXXXXXXXXXXXXAVAHGGEESVVIVGGDADLVLQGLALSKVKNLFVYASELKRSGRIVSLWQVTRQLEAMFPGESGGIRNDLIFLLVLNGNDYLPKVRGVSFGRCFRHYCAAK---------AAPGGQGSFIIDSERQRFNWPFLLRFLKFATMGAAMALQGPTPAQWVNAAVQKKVIRGGR--KKLIRGGQXXXXXXXXXXXXXXXVTYDVFSEEPEHNGDSPRFGVSVAVAGTTLTVPAEHASQKDA-RRAAATLVLQELAPELYEDYLVARQRHDAQLLAAAQQRRXXXXXXXXXXXXXXXXXLADDXXLDLDLNGDESSDEYEYEPEWDRAPGKGG-HDVKAYLTGVLWNIHMYQDGFAPDNYWRYGHRYAPSCHDMADWVEQRIALEASGADEQGQPLTDVASPVSRKPALPSDVACLAM--MSAEGRDLVPRRLRALLDADSPVGNMFAPPASXXXXXXXXQPAAGVVPQRREFDIDALLAAVNDHCPEALNGFAE-GRQEVKWTVIQHASQPLPRGCTPLNLPPP--IPPLD---RFLKVSPDTVKCVTMPATSSPPGRSW 906
BLAST of mRNA_Ecto-sp9_F_contig1103.906.1 vs.
Match: XRN_N (domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1US37_CYAM1) HSP 1 Score: 243 bits (620), Expect = 3.410e-66 Identity = 212/710 (29.86%), Postives = 325/710 (45.77%), Query Frame = 1
Query: 1 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRR--------ENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFI-----------------CSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFNRCFQAYQALK--RGKHRGVLLALPSDNFLVDGDKKSICWEFL----QDLLADMIPSIVAEA-EGYLAVSLEQMDLNNRYPPAG--SVFKMAVQQGRLGDGVEIEVH--DLSDEVSGSSAGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDIYDEFLEQEKARILEQAHLDQENEDIDSNLDEDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLD-IAKIL---------KTCQNLMPQELSEFHDDSH-----------SSGAWKVVYLDLA--------ARQRTPPAPLPPSKDFPPLDSSRRSSSYKFQRIQVTSMSATSAPRNLPWSSASDSS---SEEMQGVLDLPYKKAL 1920
Q++H+A R AR+ D R+FR ++ L+ C P+KSV AFDG APLAKL+ Q+ RR KR + + L LSPGT+ M+ A+E+Y + R YQ V+F +SG VPGEGE+K ID++ P S V++G DADL++ GLA +V+N F+ + A S + S+W+ +R L+ FPG++ +R+DL V++M+ GNDYLPK+RG SFN ++AY+ALK +G RG +LV +++S WEFL + L+ ++P++ E E Y S+ + R AG SV + + D VE VH DL D G + H E+ D+ D EK I E +D + + L+D E +L +LW L MYIDG+ P+FY YS Y PS +DIV W+K D L L P+ APPLP A L ++P + P + L+R + + + D AK++ +T ++L+ + + DD + SS A+ + D++ +++R P P PP + F L S + + + +Q+TS T R+ WS+ + S++ V +L YK+
Sbjct: 39 QLIHLAARVARNRDQFFIRLFRWLDNILRLCVPKKSVFIAFDGPAPLAKLVTQKRRRVLESRKLHRTRKRKRRCGVDVLSLSPGTELMQLTLQAVEFYVCSRLQSKRHLYQNVRFVVSGPTVPGEGEIKIIDYIHRYVDPQHSVVVIGSDADLVVLGLATQKVRNFFVFVITPRANMQDAPEHGTAQKRQAISAIVISVWQWIRVLDRFFPGETPSLRLDLVVMLMMQGNDYLPKLRGTSFNSIWEAYKALKLDKGPMRG--------KYLVCREQRSFDWEFLYALMKRLINPLVPNLTKELIEMYREASIRGQEAL-RLAQAGNASVEASSSCESESKDSVERNVHPSDLED------------------------------GTEPDAAH-------GEISADVTDPEDILEKVDIPEGISVDDDEK--------------------------LYDTEEWLRTLLWALAMYIDGFCPDFYHTYSRAYGPSASDIVRWLKENDGDPLLQLQPPLSVAPPLPPHAALLALVPASAARLLPQPIFKRVLLRSQQQAENSESAAEMGTNADETAKLITFILQDDGRRTNRSLLLRVVEGIRDDEYEEIEKHRTRLSSSVAFALRQGDMSGNGRTCASSQERAPKLPEPPVQRFAKLSLS--GAEFSIEGVQLTS---TPPCRSWCWSTDGTEARRTSKKAVSVQNLSYKRVF 671
BLAST of mRNA_Ecto-sp9_F_contig1103.906.1 vs.
Match: Uncharacterized (protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JQ07_GUITC) HSP 1 Score: 229 bits (584), Expect = 5.300e-66 Identity = 122/240 (50.83%), Postives = 163/240 (67.92%), Query Frame = 1
Query: 4 ILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLKHM--PKPDESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLS-------------SIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFNRCFQAYQALK 675
+LH A RKA+D +HAI R++++++ TL+ P KSVV AFDG PLAKLL QR RR S + SKY++S LH++PGTKFM+ + A EYYA ++ V FYISGA+V GEGE+K I+W+ ++ + DE +IVGGDADL+LQGLA+ VK+ F+ + D + S S+WEVVRSLE +FPGQS VR DL VL+++NGNDYLPKVRG SF F+AY+ +K
Sbjct: 4 LLHTACRKAKDFEHAILRVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRNKSSKASKYKLSGLHITPGTKFMQTMREACEYYAALRLVASAKFKNVAFYISGADVAGEGEIKIIEWIHNLLQNQNDEKIIIVGGDADLVLQGLAVLRVKDLFVYAGKDMSQHPSSRKAKGKSSPSIVLSMWEVVRSLERLFPGQSQAVRADLIVLMIMNGNDYLPKVRGGSFESFFRAYKKVK 243
BLAST of mRNA_Ecto-sp9_F_contig1103.906.1 vs.
Match: Hypothetical (protein n=4 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TFG2_9RHOD) HSP 1 Score: 224 bits (572), Expect = 8.240e-60 Identity = 155/485 (31.96%), Postives = 246/485 (50.72%), Query Frame = 1
Query: 1 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHL-----SPGTKFMEDVASAMEYYAFQECTR----PCYQGVKFYISGANVPGEGELKCIDWLKHMPKP-----------DESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFNRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSAGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDIYDEFLEQEKARILEQAHLDQENEDIDSNLDEDSGAENGRECSSRKGKTP--LFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVK 1389
Q++H+A+RK+ +E+ + R+FR+++ LK+C P++SV FAFDG P+AKLL QR RR N + + ++ H+ +PGT+ M + A++Y+A C+R Y V ISG +VPGEGE+K DWL ES +++GGDAD++LQGLA + ++ F+ +Q+ + SI +V++LE FPG+S VR+D VL ++NGNDYLPKVRGV F+ + Y A+K+G+ + +L+D +++ W FL LL + I S+V E LA Q++ +R + E HD+ + + L+ G +A +PD+ D+ + + D D +S DE + G++P LFD+E FL G+LWN+QMY+DG+ P++ + Y Y+PS I++WVK
Sbjct: 31 QVIHMALRKSPNEEKLVIRLFRNIDAALKQCIPKRSVYFAFDGPGPMAKLLTQRVRRSNPANSQRKVLANRHIDPNAITPGTELMYMLQDALDYFA---CSRLEGDMKYDKVDMRISGPDVPGEGEVKIFDWLNSFVARREAGTQVSSIVTESVIVIGGDADIVLQGLATTSFRDLFVYAQSRRDEGTVISISLLVKALEDNFPGESDRVRLDFIVLCLMNGNDYLPKVRGVGFDSLWNGYIAIKKGREQF------QGQYLLDSTRRTFNWPFLVALL-ETIRSVVIEPHVLLAEKSLQVEEPSR--------------------MNEEEHDVPPDPNEI---------------------ILYTGDMTASASTSA------AIPDVDDDEEDHADXXXXXXSVGDDGEYDYESAYDE-----------TNTGESPNRLFDIELFLRGILWNVQMYVDGFCPDYTYVYPELYAPSPTAIMNWVK 447
BLAST of mRNA_Ecto-sp9_F_contig1103.906.1 vs.
Match: XRN_N (domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IHE6_9RHOD) HSP 1 Score: 223 bits (569), Expect = 4.010e-59 Identity = 157/534 (29.40%), Postives = 256/534 (47.94%), Query Frame = 1
Query: 1 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMS--------ALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDESAVIVGGDADLILQGLALSEVKNTFI-----------CSQTDAGSYRLS------SIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFNRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSAGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDIYDEFLEQEKARILEQAHLDQENEDIDSNLDEDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRL 1521
Q++H+A R A++ D R++R ++ L+ C P++SV AFDG APLAKL+ Q+ RR R ++ L LSPGT+ M+ A+E+Y + R Y+ ++F +SG VPGEGE+K ID++ +P S +++G DADL+L GLA ++++ F+ S+ A ++R S S+W+ +R L+ +FPG++A VR+DLA+L+M+ GNDY+PK+RG SF + AY+ALK +G + S +L+ G++++I EFL L++ + +V + L + + + + RL E+ + G + + E + + K E +++ PD E +E + S +FD E++L +LW L MY+DG+ P+FY+ Y Y PS DIV W++ D + L P+ APPLP A L ++P T LP+ L
Sbjct: 39 QLIHLAARVAKNRDQFFIRLYRWLDKVLRLCVPKESVFIAFDGPAPLAKLVTQKRRRVLEARKLTRKLEPKKRCGVDVLSLSPGTELMQMTLQAIEFYVCSRLQSKRNLYRNLRFVVSGPTVPGEGEIKIIDYIHRCVEPHHSVIVIGSDADLVLLGLATQKIRDFFVFVITPRQSAQVASRGPAETHRNSVNATTISVWQWIRVLDRLFPGETAPVRLDLALLLMMQGNDYVPKLRGSSFKSIWAAYKALKM--RQGPM----SGRYLLCGEQRTINLEFLYALMSSLENPLVPQLTKQLVEMYREASIRGQ------------EMARLA------------ELESTRTGATETPDNDSISDVEQILYNGDLEKPSPCKETTKEPVIDMTDPDDMLEMVETPEG-------------------------------VSYDNDETMFDTENWLRMLLWALAMYVDGFCPDFYFTYPKPYGPSATDIVRWLQEIDGDPIPTLQPPMSVAPPLPPHAALLALIPST--AAKLLPRPL 509
BLAST of mRNA_Ecto-sp9_F_contig1103.906.1 vs.
Match: 5'-3' (exoribonuclease 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5K0_9FLOR) HSP 1 Score: 204 bits (520), Expect = 2.000e-52 Identity = 171/534 (32.02%), Postives = 248/534 (46.44%), Query Frame = 1
Query: 1 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKY-------------------RMSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLKHMPKPD-ESAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYR-----LSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFNRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGDGVEIEVHDLSDEVSGSSAGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDIYDEFLEQEKARILEQAHLDQENEDIDSNLDEDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPPLPASIACLCMLPMTDRGKSFLPKRLQ 1524
QILH A+RKA + IFR+++ LK C PRKSV FAFDG APLAKL QR RR + S+Y + L ++PG + + V ++EY+A+ Y+ V+ ISGA+VPGEGELK ID+ + P +S V+VGGDAD++LQGLA V+N F+ + AGS + S+WE+ R E +FP +S+ VR+D +L +LNGNDY+PKVRG+S +R + Y LK G + LVD +K+++ W L+ + G S+ + + PAG V R G E V EV T V L T +E + E D Y++ E D+E E I + + S K +D ++ +LWN+QMY+DGY ++ +RY Y P +I+++++ D + A PV PL A + +LP + K LPK LQ
Sbjct: 39 QILHQAVRKATNRQTLAAAIFRELDQILKNCIPRKSVFFAFDGPAPLAKLATQRRRRRQRRGASEYVSDYIDENGVSRKAKTVQPAIDGLEMTPGVETLYFVRDSVEYWAYSRLQNDRKYRNVEIRISGADVPGEGELKLIDFCRTAQIPSTDSVVVVGGDADIVLQGLATVPVRNFFVYLRNFAGSRGRRQSYVISVWELTRIFERLFPNESSSVRLDFVLLAILNGNDYIPKVRGISLSRTWHRYLNLKLDSSGGRPGPFRGRS-LVDAEKRTLNWPMFYALM---------DRVGVPVSSIAEAEQEKESTPAG------VPPRRKRRGKEGYVSYSDSEVGERIVYTGNEDGVPM--------DCLDDDSVPTRDESFSENGVSET--DSYEDSSEYNXXXXX--XXFDEEQEHIQTLVT----------LSGNSSK--FYDTNRWVRALLWNIQMYVDGYCGDYSFRYGKPYGPPITEILNYIRNHDGDPFLHQA-PVSNWRPLLPHQAAMAVLP--KQAKHLLPKPLQ 529
BLAST of mRNA_Ecto-sp9_F_contig1103.906.1 vs.
Match: 5'-3' (exoribonuclease 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR78_NANGC) HSP 1 Score: 177 bits (450), Expect = 1.600e-44 Identity = 115/291 (39.52%), Postives = 161/291 (55.33%), Query Frame = 1
Query: 1 QILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQ--ECTRPCYQGVKFYISGANVPGEGELKCIDWL-------------------------KHMPKPDESAVIVGGDADLILQGLALSEVK--NTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFNRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADM 786
Q+ H+A RKARDEDHAIRR+ +++ TL+ +KSVV AFDG APLAK++ QR RR K ++K +++LHLSPGT FM A A+ + E + +++Y+S + PGEGE+K +DW+ K K ES V+VGGDADL+LQGLAL + N FI +G + S+ + V LE FPGQS VR D+ +L+++ GNDYL KVRG++F AY +KR D F++ + K+ W FLQ D+
Sbjct: 101 QLTHMAARKARDEDHAIRRLLKELGRTLRVLRAQKSVVIAFDGPAPLAKIITQRKRRAAEK-DAKTPLNSLHLSPGTSFMRRAAEAVIDFCHTRLESDLTPRRRIRYYVSCSESPGEGEVKLMDWINTYLLTHEDGRXXXXXXXXXXXXXKKAGRKDSESIVVVGGDADLVLQGLALPGLPDFNVFIPDVKRSGYF--VSLRQFVARLETDFPGQSHQVRTDMVLLLVMAGNDYLKKVRGLTFRSKLLAYNNVKRKPEF-------KDQFMLLAENKTFNWPFLQAFYDDL 381
BLAST of mRNA_Ecto-sp9_F_contig1103.906.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0E673_9CRYP) HSP 1 Score: 161 bits (407), Expect = 5.950e-42 Identity = 81/165 (49.09%), Postives = 116/165 (70.30%), Query Frame = 1
Query: 4 ILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQECTRPC-YQGVKFYISGANVPGEGELKCIDWLKHM--PKPDESAVIVGGDADLILQGLALSEVKNTFICSQTD 489
+LH A R+A+D +HAI +++++++ TL+ P KSVV AFDG PLAKLL QR RR S ++SKY++S LH++PGTKFM + A EYYA ++ V FYISG++V GEGE+K IDW+ ++ + D+ +IVGGDADL+LQGLA+ VK+ F+ + D
Sbjct: 14 LLHTACRRAKDFEHAILKVYKELDATLRTLIPTKSVVLAFDGPGPLAKLLTQRKRRSKSSKSSKYKLSGLHITPGTKFMHAMKQACEYYAALRLVASAKFRNVAFYISGSDVAGEGEIKIIDWIHNLLHSQNDDRLIIVGGDADLVLQGLAVLRVKDLFVYAGKD 178
BLAST of mRNA_Ecto-sp9_F_contig1103.906.1 vs.
Match: XRN (5'-3' exonuclease N-terminus-domain-containing protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QGS0_9FUNG) HSP 1 Score: 171 bits (434), Expect = 4.440e-41 Identity = 176/625 (28.16%), Postives = 268/625 (42.88%), Query Frame = 1
Query: 4 ILHVAMRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRRENSKRNSKYRMSALHLSPGTKFMEDVASAMEYYAFQEC-TRPCYQGVKFYISGANVPGEGELKCIDWLKHMPKPDE-SAVIVGGDADLILQGLALSEVKNTFICSQTDAGSYRLSSIWEVVRSLEAMFPGQSALVRIDLAVLIMLNGNDYLPKVRGVSFNRCFQAYQALKRGKHRGVLLALPSDNFLVDGDKKSICWEFLQDLLADMIPSIVAEAEGYLAVSLEQMDLNNRYPPAGSVFKMAVQQGRLGD-----GVEIEVHDLSDEVSGSSAGTKKWKSVTWVRGKEYTYHFLHVGKKKTVMHLAAEKLLEELLPDIYDEFLEQEKARILEQAHLDQENEDIDSNLDEDSGAENGRECSSRKGKTPLFDVESFLLGVLWNLQMYIDGYVPNFYWRYSPRYSPSCADIVSWVKLASEDKLANLAVPVIGAPP---LPASIACLCMLPMTDRGKSFLPKRLQPLVRPGSPLLEALEWRGVSSGLDIAKI----------LKTCQNLMPQELSEFHDDSHSSGAWKVVYLDLAARQRTPPAPLPPSK--DFPPLDSSRRSSSYKFQRIQVT 1812
++H +R ++ E ++R F ++ L +C P + A DG PLAKLL QR RRE +K+ S +S L ++PG FME V + YY + T+ Q +KF I GA PGEGE K I L E S IV D+D ILQ +A S + F+ + +++ SI + L FPGQ A +R+D VL M+ GNDYL K+R S +R + Y LK G+ R A D FLVD + ++I L+ L+A++ P E + + +G+ V++EV + E + WK + + KK V + ++++ +L DI D + AE+ +P+FDV ++L G+LWNL MY +G P+F + Y R +PS I+ WV E L +I P LP S +L + +RG +L L+ + L+ A+ S G +A + L L+ L EF + S V+ R+ P P+PPS+ D+P L R S+ KF+ + T
Sbjct: 41 LIHDTLRSSKTEKMFVKRFFDMIDKILTQCTPTRICYLAVDGPGPLAKLLEQRKRREKNKKKSNG-LSTLQITPGCLFMERVEIYLAYYICRYLQTKKHPQDLKFVIDGAASPGEGESKIIQNLSENSALIEGSCAIVTPDSDAILQAIA-SGIPRLFVVRKIKQAQHKVLSIDSLTLQLNTWFPGQGARMRLDFVVLAMMCGNDYLGKLRHSSMDRLWLHYLGLKTGRSRR-FGARFKDLFLVDAEGRTIDLRMLKALMAEL-PHYWRSDERWTSAPETXXXXXXXXXXXXXXXXXXXXXXXVGEVDLAFEVDMEVEEADVE---EADDVVVWKGL--------------MALKKQVDVVTEDEVVGDLDEDIMXXXXXXXXXXXXXXXXX------XDVTVSYTFNAESS---------SPMFDVRTYLEGLLWNLTMYAEGRCPDFKYTYRYRMAPSPRQILEWVN-EREKAAGTLVGQLITCPQSSQLPFSPLLCALLVLPERGNIYLHSSFSTLLTTHAALITAIVASQGSDGGALATLSAAISAIHSTLSPTDRLLLTPLFEFRNPS--------VWWQSLLREHDIPMPIPPSEAGDWPAL---ARGSNIKFKDVVKT 617 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1103.906.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1103.906.1 >prot_Ecto-sp9_F_contig1103.906.1 ID=prot_Ecto-sp9_F_contig1103.906.1|Name=mRNA_Ecto-sp9_F_contig1103.906.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=754bp MRKARDEDHAIRRIFRDVNLTLKRCPPRKSVVFAFDGSAPLAKLLVQRSRback to top mRNA from alignment at Ecto-sp9_F_contig1103:17757..26300- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1103.906.1 ID=mRNA_Ecto-sp9_F_contig1103.906.1|Name=mRNA_Ecto-sp9_F_contig1103.906.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=8544bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1103:17757..26300- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1103:17757..26300- >mRNA_Ecto-sp9_F_contig1103.906.1 ID=mRNA_Ecto-sp9_F_contig1103.906.1|Name=mRNA_Ecto-sp9_F_contig1103.906.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=4524bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1103:17757..26300- (Ectocarpus species9 EcSCA_722f female)back to top |