mRNA_Ecto-sp9_F_contig1100.887.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1100.887.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q5_9PHAE) HSP 1 Score: 241 bits (614), Expect = 3.010e-73 Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 1
Query: 1 SRSYVPRNPYRTPTAFPSQPAAAFEKPHMFEKLNTDTLFLIFYYQQGSYQQYLAARELKRQSWRYHKKYMTWFQRHEEPKVTTDDYEQGTYVYFDYETGWCQRIKSDFRFDYSFLEDEAL 360
++ YVPRNPYRT TAFPSQPA AFEKPHMFEKLNTDTLFLIFYYQQGSYQQYLAARELKRQSWRYHKKYMTWFQRHEEPKVTTDDYEQGTYVYFDYETGWCQRIKSDFRFDYSFLEDEAL
Sbjct: 644 AKPYVPRNPYRTSTAFPSQPAEAFEKPHMFEKLNTDTLFLIFYYQQGSYQQYLAARELKRQSWRYHKKYMTWFQRHEEPKVTTDDYEQGTYVYFDYETGWCQRIKSDFRFDYSFLEDEAL 763
BLAST of mRNA_Ecto-sp9_F_contig1100.887.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WE12_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.040e-65 Identity = 94/116 (81.03%), Postives = 105/116 (90.52%), Query Frame = 1
Query: 4 RSYVPRNPYRTPTAFPSQPAAAFEKPHMFEKLNTDTLFLIFYYQQGSYQQYLAARELKRQSWRYHKKYMTWFQRHEEPKVTTDDYEQGTYVYFDYETGWCQRIKSDFRFDYSFLED 351
R+Y PRNPY TP+++PS P+ F+ P +FEKL TD LF IFYY QG+YQQYLAARELK+QSWRYHKKYMTWFQRHEEPKVTTD+YEQGTYVYFDYETGWCQRIKSDFRF+YSFLED
Sbjct: 17 RTYTPRNPYPTPSSYPSTPSQIFDNPAVFEKLGTDCLFFIFYYAQGTYQQYLAARELKKQSWRYHKKYMTWFQRHEEPKVTTDEYEQGTYVYFDYETGWCQRIKSDFRFEYSFLED 132
BLAST of mRNA_Ecto-sp9_F_contig1100.887.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZND7_TRICV) HSP 1 Score: 203 bits (517), Expect = 7.280e-65 Identity = 94/116 (81.03%), Postives = 105/116 (90.52%), Query Frame = 1
Query: 4 RSYVPRNPYRTPTAFPSQPAAAFEKPHMFEKLNTDTLFLIFYYQQGSYQQYLAARELKRQSWRYHKKYMTWFQRHEEPKVTTDDYEQGTYVYFDYETGWCQRIKSDFRFDYSFLED 351
R+Y PRNPY TP+++PS P+ F+ P +FEKL TD LF IFYY QG+YQQYLAARELK+QSWRYHKKYMTWFQRHEEPKVTTD+YEQGTYVYFDYETGWCQRIKSDFRF+YSFLED
Sbjct: 66 RTYTPRNPYPTPSSYPSVPSPIFDNPAVFEKLGTDCLFFIFYYAQGTYQQYLAARELKKQSWRYHKKYMTWFQRHEEPKVTTDEYEQGTYVYFDYETGWCQRIKSDFRFEYSFLED 181
BLAST of mRNA_Ecto-sp9_F_contig1100.887.1 vs.
Match: NOT2_3_5 (domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CE67_THAPS) HSP 1 Score: 199 bits (505), Expect = 1.170e-63 Identity = 92/116 (79.31%), Postives = 102/116 (87.93%), Query Frame = 1
Query: 4 RSYVPRNPYRTPTAFPSQPAAAFEKPHMFEKLNTDTLFLIFYYQQGSYQQYLAARELKRQSWRYHKKYMTWFQRHEEPKVTTDDYEQGTYVYFDYETGWCQRIKSDFRFDYSFLED 351
RSY PRNPY TP+ +P P+ FE P +FEKL TD LF IFYY QG+YQQYLAARELK+QSWRYHKKYMTWFQRHEEPKVTTD+YEQGTYVYFDYETGW QRIK+DFRF+YS+LED
Sbjct: 21 RSYTPRNPYPTPSCYPQNPSPIFENPAVFEKLGTDALFFIFYYAQGTYQQYLAARELKKQSWRYHKKYMTWFQRHEEPKVTTDEYEQGTYVYFDYETGWTQRIKTDFRFEYSYLED 136
BLAST of mRNA_Ecto-sp9_F_contig1100.887.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8TWH2_9STRA) HSP 1 Score: 203 bits (517), Expect = 7.760e-63 Identity = 94/117 (80.34%), Postives = 105/117 (89.74%), Query Frame = 1
Query: 1 SRSYVPRNPYRTPTAFPSQPAAAFEKPHMFEKLNTDTLFLIFYYQQGSYQQYLAARELKRQSWRYHKKYMTWFQRHEEPKVTTDDYEQGTYVYFDYETGWCQRIKSDFRFDYSFLED 351
+R Y PRNPY TP+++P+ P+ FE P +FEKL TD LF IFYY QG+YQQYLAARELK+QSWRYHKKYMTWFQRHEEPKVTTD+YEQGTYVYFDYETGWCQRIKSDFRF+YSFLED
Sbjct: 218 ARVYTPRNPYPTPSSYPASPSPIFENPAIFEKLGTDCLFFIFYYAQGTYQQYLAARELKKQSWRYHKKYMTWFQRHEEPKVTTDEYEQGTYVYFDYETGWCQRIKSDFRFEYSFLED 334
BLAST of mRNA_Ecto-sp9_F_contig1100.887.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJK4_AURAN) HSP 1 Score: 207 bits (527), Expect = 9.850e-62 Identity = 96/119 (80.67%), Postives = 107/119 (89.92%), Query Frame = 1
Query: 4 RSYVPRNPYRTPTAFPSQPAAAFEKPHMFEKLNTDTLFLIFYYQQGSYQQYLAARELKRQSWRYHKKYMTWFQRHEEPKVTTDDYEQGTYVYFDYETGWCQRIKSDFRFDYSFLEDEAL 360
R YVPRNPY TP AFPS PA+ F+ +FEKL TDTLF IFYYQQG+YQQYLAA+ELK+QSWRYHKKYMTWFQRHEEPKVTTD++EQGTYVYFDYETGWCQRIKSDF F+Y+FLEDE +
Sbjct: 479 RQYVPRNPYATPPAFPSTPASTFDDAKVFEKLGTDTLFFIFYYQQGTYQQYLAAKELKKQSWRYHKKYMTWFQRHEEPKVTTDEFEQGTYVYFDYETGWCQRIKSDFTFEYNFLEDELV 597
BLAST of mRNA_Ecto-sp9_F_contig1100.887.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BCF8_CHRCT) HSP 1 Score: 201 bits (510), Expect = 1.790e-61 Identity = 91/117 (77.78%), Postives = 105/117 (89.74%), Query Frame = 1
Query: 4 RSYVPRNPYRTPTAFPSQPAAAFEKPHMFEKLNTDTLFLIFYYQQGSYQQYLAARELKRQSWRYHKKYMTWFQRHEEPKVTTDDYEQGTYVYFDYETGWCQRIKSDFRFDYSFLEDE 354
++YVPRNPY TP++FP PA+ F+ P +FEK + DTLF IFYYQQG+YQQYLAARELK+QSWRYHKKY+TWFQRHEEPKVT D+YEQGTYVYFDYETGWCQRIKS+F F+Y FLEDE
Sbjct: 245 KTYVPRNPYPTPSSFPQTPASVFDAPAVFEKFDVDTLFFIFYYQQGTYQQYLAARELKKQSWRYHKKYLTWFQRHEEPKVTADEYEQGTYVYFDYETGWCQRIKSEFTFEYGFLEDE 361
BLAST of mRNA_Ecto-sp9_F_contig1100.887.1 vs.
Match: Hypothetical (protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZSK2_9STRA) HSP 1 Score: 191 bits (486), Expect = 2.670e-60 Identity = 87/117 (74.36%), Postives = 102/117 (87.18%), Query Frame = 1
Query: 4 RSYVPRNPYRTPTAFPSQPAAAFEKPHMFEKLNTDTLFLIFYYQQGSYQQYLAARELKRQSWRYHKKYMTWFQRHEEPKVTTDDYEQGTYVYFDYETGWCQRIKSDFRFDYSFLEDE 354
R Y P+NPY T +++P+ P++ FE P +FEKL TD LF IFYY QG+YQQYLAARELK+QSWR+HKKYMTWFQRHEEP VTTD+YEQGTYVYFDYETGWC RIK DFRF+YS+LED+
Sbjct: 55 RHYTPQNPYATHSSYPAAPSSIFENPAVFEKLGTDCLFFIFYYAQGTYQQYLAARELKKQSWRFHKKYMTWFQRHEEPNVTTDEYEQGTYVYFDYETGWCTRIKQDFRFEYSYLEDQ 171
BLAST of mRNA_Ecto-sp9_F_contig1100.887.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U5I8_9STRA) HSP 1 Score: 204 bits (519), Expect = 5.500e-60 Identity = 95/116 (81.90%), Postives = 104/116 (89.66%), Query Frame = 1
Query: 4 RSYVPRNPYRTPTAFPSQPAAAFEKPHMFEKLNTDTLFLIFYYQQGSYQQYLAARELKRQSWRYHKKYMTWFQRHEEPKVTTDDYEQGTYVYFDYETGWCQRIKSDFRFDYSFLED 351
R+Y PRNPY TP A+PS P+ F+ P +FEKL TD LF IFYY QG+YQQYLAARELK+QSWRYHKKYMTWFQRHEEPKVTTD+YEQGTYVYFDYETGWCQRIKSDFRF+YSFLED
Sbjct: 561 RTYTPRNPYPTPAAYPSTPSPLFDNPAIFEKLGTDGLFFIFYYAQGTYQQYLAARELKKQSWRYHKKYMTWFQRHEEPKVTTDEYEQGTYVYFDYETGWCQRIKSDFRFEYSFLED 676
BLAST of mRNA_Ecto-sp9_F_contig1100.887.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZNC6_TRICV) HSP 1 Score: 203 bits (517), Expect = 8.860e-60 Identity = 94/116 (81.03%), Postives = 105/116 (90.52%), Query Frame = 1
Query: 4 RSYVPRNPYRTPTAFPSQPAAAFEKPHMFEKLNTDTLFLIFYYQQGSYQQYLAARELKRQSWRYHKKYMTWFQRHEEPKVTTDDYEQGTYVYFDYETGWCQRIKSDFRFDYSFLED 351
R+Y PRNPY TP+++PS P+ F+ P +FEKL TD LF IFYY QG+YQQYLAARELK+QSWRYHKKYMTWFQRHEEPKVTTD+YEQGTYVYFDYETGWCQRIKSDFRF+YSFLED
Sbjct: 549 RTYTPRNPYPTPSSYPSVPSPIFDNPAVFEKLGTDCLFFIFYYAQGTYQQYLAARELKKQSWRYHKKYMTWFQRHEEPKVTTDEYEQGTYVYFDYETGWCQRIKSDFRFEYSFLED 664 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1100.887.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1100.887.1 >prot_Ecto-sp9_F_contig1100.887.1 ID=prot_Ecto-sp9_F_contig1100.887.1|Name=mRNA_Ecto-sp9_F_contig1100.887.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=121bp SRSYVPRNPYRTPTAFPSQPAAAFEKPHMFEKLNTDTLFLIFYYQQGSYQback to top mRNA from alignment at Ecto-sp9_F_contig1100:25537..26288- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1100.887.1 ID=mRNA_Ecto-sp9_F_contig1100.887.1|Name=mRNA_Ecto-sp9_F_contig1100.887.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=752bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1100:25537..26288- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1100:25537..26288- >mRNA_Ecto-sp9_F_contig1100.887.1 ID=mRNA_Ecto-sp9_F_contig1100.887.1|Name=mRNA_Ecto-sp9_F_contig1100.887.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=726bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1100:25537..26288- (Ectocarpus species9 EcSCA_722f female)back to top |