mRNA_Ecto-sp9_F_contig11.875.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig11.875.1
Unique NamemRNA_Ecto-sp9_F_contig11.875.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11.875.1 vs.
Match: C2 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIL9_ECTSI)

HSP 1 Score: 398 bits (1023), Expect = 2.460e-136
Identity = 199/205 (97.07%), Postives = 201/205 (98.05%), Query Frame = 1 
Query:    1 QVMDHDVYTTNDAIGLVYVDLSPLFMRTAERDQESRDLTVQGWFPLYDTLRGVRGALCLVIKVRFIGDQNPFRESSAGVQFFGVSTLNPELYTVQKVVGLVDELVVDNDPEYQWMDNFRQARTSNESRQSLLYKLDATVRRQLGKKVLDLGCNAVLAYQQDFDVEGDSGIVARAYGTACVIQRREQHSDITKTSELFHTRQLSAG 615
            +VMDHDVYTTNDAIGLVYVDLSPLFMRTAERDQESRDLTVQGWFPLYDTLRGVRGALCLVIKVRFIGDQNPFRESSAGVQFFGVSTLNPELYTVQKVVGLVDELVVDNDPEYQWMDNFRQARTSNESRQSLLYKLDATVRRQLGKKVLDLGCNAVLAYQQDFDVEGDSGIVARAYGTACVIQRREQHSDITK SEL HTRQ + G
Sbjct:   76 KVMDHDVYTTNDAIGLVYVDLSPLFMRTAERDQESRDLTVQGWFPLYDTLRGVRGALCLVIKVRFIGDQNPFRESSAGVQFFGVSTLNPELYTVQKVVGLVDELVVDNDPEYQWMDNFRQARTSNESRQSLLYKLDATVRRQLGKKVLDLGCNAVLAYQQDFDVEGDSGIVARAYGTACVIQRREQHSDITKASELSHTRQDTGG 280
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11.875.1 vs.
Match: C2 (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKY6_9STRA)

HSP 1 Score: 243 bits (620), Expect = 4.950e-69
Identity = 131/203 (64.53%), Postives = 149/203 (73.40%), Query Frame = 1 
Query:    1 QVMDHDVYTTNDAIGL---------------VYVDLSPLFMRTAERDQESRDLTVQGWFPLYDTLRGVRGALCLVIKVRFIGDQNPFRESSAGVQFFGVSTLNPELYTVQK--VVGLVDELVVDNDPEYQWMDNFRQARTSNESRQSLLYKLDATVRRQLGKKVLDLGCNAVLAYQQDFDVEGDSGIVARAYGTACVIQRREQ 558
            +VMD DVYT  DAIG                VY+ L PL MR A+  ++S DL +QGWFPLYDTLRGVRG L LVIK++FIGDQNPFRESSAGVQFF +STLNP++Y V K  V G V+EL+V+NDPE+QW DNFRQAR+SNESRQSLL+KLDA           D G NAVL Y QDFD+EGDSGIVARAYGTACVIQR  Q
Sbjct:   77 KVMDKDVYTAGDAIGXXXXXXXXXXXXXXXXVYISLGPLLMRAADATEKS-DLAIQGWFPLYDTLRGVRGELYLVIKLKFIGDQNPFRESSAGVQFFAMSTLNPDVYRVTKASVFGFVEELLVENDPEFQWRDNFRQARSSNESRQSLLFKLDAA----------DAGGNAVLGYLQDFDIEGDSGIVARAYGTACVIQRTHQ 268
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11.875.1 vs.
Match: C2 (domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EB42_BRELC)

HSP 1 Score: 224 bits (572), Expect = 3.530e-66
Identity = 115/204 (56.37%), Postives = 149/204 (73.04%), Query Frame = 1 
Query:    1 QVMDHDVYTTNDAIGLVYVDLSPLFMRTAERDQESRDLTVQGWFPLYDTLRGVRGALCLVIKVRFIGDQNPFRESSAGVQFFGVSTLNPELYTVQKVVGLVDELVVDNDPEYQWMDNFRQARTSNESRQSLLYKLDATVRRQLGKKVLDLGCNAVLAYQQDFDVEGDSGIVARAYGTACVIQRREQHSDITKTSELFHTRQLSA 612
            ++MDHDVYTT+  +G+VYVDL+ L MR            +QGWFP+YDTL GVR  L LVI++++ GD NPFRESSAGVQFFG+STL+P LY ++ ++G V+ELVV  DPEY W D+FR +R SNE RQ LLY+L + V   +GKK L+LG NAVLAY+Q FDVEGDSG+VARA GTAC++   E++ D+ +  +   TR  SA
Sbjct:   73 KLMDHDVYTTDATVGIVYVDLNCLLMRDGH--------VIQGWFPVYDTLLGVRCELSLVIRLQYFGDVNPFRESSAGVQFFGLSTLDPSLYRIESMLGFVEELVVHADPEYSWSDSFRTSRRSNEHRQLLLYQLSSQVATLVGKKALELGGNAVLAYKQFFDVEGDSGLVARACGTACLVIPVEKN-DVVEREKCSQTRSRSA 267
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11.875.1 vs.
Match: C2 (domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPD7_9STRA)

HSP 1 Score: 223 bits (567), Expect = 2.940e-65
Identity = 113/187 (60.43%), Postives = 140/187 (74.87%), Query Frame = 1 
Query:    1 QVMDHDVYTTNDAIGLVYVDLSPLFMRTAERDQESRDLTVQGWFPLYDTLRGVRGALCLVIKVRFIGDQNPFRESSAGVQFFGVSTLNPELYTVQKVVGLVDELVVDNDPEYQWMDNFRQARTSNESRQSLLYKLDATVRRQLGKKVLDLGCNAVLAYQQDFDVEGDSGIVARAYGTACVIQRREQH 561
            ++MDHDVYTT+  +G+VYVDL+ L MR            +QGWFP+YDTL GVR  L LVI++++ GD NPFRESSAGVQFFG+STL+P LY ++ ++G V+ELVV  DPEY W DNFR +R SNE RQ LLYKL + V   +GKK L+LG NAVLAY+Q FDVEGDSG+VARA GTAC I   E++
Sbjct:   73 KLMDHDVYTTDATVGIVYVDLNCLLMRDGH--------VIQGWFPVYDTLLGVRCELSLVIRLQYFGDVNPFRESSAGVQFFGLSTLDPSLYRIESMLGFVEELVVHADPEYSWSDNFRTSRKSNEHRQLLLYKLSSQVVTMVGKKALELGGNAVLAYKQFFDVEGDSGLVARACGTACYITPVEKN 251
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11.875.1 vs.
Match: C2 (domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AZW8_9STRA)

HSP 1 Score: 215 bits (547), Expect = 3.420e-64
Identity = 109/178 (61.24%), Postives = 135/178 (75.84%), Query Frame = 1 
Query:    1 QVMDHDVYTTNDAIGLVYVDLSPLFMRTAERDQESRDLTVQGWFPLYDTLRGVRGALCLVIKVRFIGDQNPFRESSAGVQFFGVSTLNPELYTVQKVVGLVDELVVDNDPEYQWMDNFRQARTSNESRQSLLYKLDATVRRQLGKKVLDLGCNAVLAYQQDFDVEGDSGIVARAYGTA 534
            +VMDHDVYTT+  IG+VYVDL+ + M+           +VQGW+P+YDTL GVRG L LVI++ + GD NPFRESSAGVQFF +STL+P ++T Q+++G V+ELVV  DPEY W D+FR +R SNE RQ LLYKL + V   +GKK LDLG NAVL Y+Q FDVEGDSG+VARA GTA
Sbjct:   73 KVMDHDVYTTDATIGIVYVDLNCILMKEG--------CSVQGWYPIYDTLLGVRGELHLVIRLHYFGDINPFRESSAGVQFFSLSTLDPAIFTTQRMLGFVEELVVHADPEYSWSDSFRTSRKSNEYRQLLLYKLSSQVSTMVGKKALDLGGNAVLGYRQFFDVEGDSGMVARACGTA 242
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11.875.1 vs.
Match: C2 (domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VWA7_9STRA)

HSP 1 Score: 225 bits (574), Expect = 3.450e-63
Identity = 119/217 (54.84%), Postives = 150/217 (69.12%), Query Frame = 1 
Query:    1 QVMDHDVYTTNDAIGLVYVDLSPLFMRTAERDQESRDLTVQGWFPLYDTLRGVRGALCLVIKVRFIGDQNPFRESSAGVQFFGVSTLNPELYTVQKVVGLVDELVVDNDPEYQWMDNFRQARTSNESRQSLLYKLDATVRRQLGKKVLDLGCNAVLAYQQDFDVEGDSGIVARAYGTACVIQRREQHSDITKTSELFHTRQLSAGHGGDGVGLSPGR 651
            ++MDHDVYTT+  +GLVYVDL+ L MR            +QGWFP+YDTL GVR  L LVI++++ GD NPFRESSAGVQFFG+STL+P LY ++ ++G V+ELVV  DPEY W DNFR +R SNE RQ LLYKL + V   +GKK L+LG NAVLAY+Q FDVEGDSG+VARA GTAC I    ++  I +            GH G+ + + PG+
Sbjct:   73 KLMDHDVYTTDATVGLVYVDLNCLLMRDGH--------VIQGWFPVYDTLLGVRCELSLVIRLQYFGDVNPFRESSAGVQFFGLSTLDPSLYRIESMLGFVEELVVHADPEYSWSDNFRTSRRSNEHRQLLLYKLSSQVVTLVGKKALELGGNAVLAYKQFFDVEGDSGLVARACGTACYITPVGKNEWIPENGNSQQRTHSEDGHDGE-LKVDPGK 280
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11.875.1 vs.
Match: C2 (domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6Y6M1_9STRA)

HSP 1 Score: 214 bits (545), Expect = 5.380e-63
Identity = 114/205 (55.61%), Postives = 142/205 (69.27%), Query Frame = 1 
Query:    1 QVMDHDVYTTNDAIGLVYVDLSPLFMRTAERDQESRDLTVQGWFPLYDTLRGVRGALCLVIKVRFIGDQNPFRESSAGVQFFGVSTLNPELYTVQKVVGLVDELVVDNDPEYQWMDNFRQARTSNESRQSLLYKLDATV----------------RRQLGKKVLDLGCNAVLAYQQDFDVEGDSGIVARAYGTACVIQRREQHSD 567
            +VMDHDVYTT+  IG+VYVDL+ + M+           +VQGW+P+YDTL GVRG L LVI++ + GD NPFRESSAGVQFF +STL+P ++T Q+V+G V+ELVV  DPEY W D+FR +R SNE RQ LLYKL + V                RRQ+GKK LDLG NAVL Y+Q FDVEGDSG+VARA GTA  +   ++  D
Sbjct:   73 KVMDHDVYTTDATIGIVYVDLNCILMKEGS--------SVQGWYPIYDTLLGVRGELHLVIRLHYFGDINPFRESSAGVQFFSLSTLDPAIFTTQRVLGFVEELVVHADPEYSWSDSFRTSRKSNEYRQMLLYKLSSQVSTMVSNVFSRSTSSLERRQVGKKALDLGGNAVLGYRQFFDVEGDSGMVARACGTAVFLVPTDKSQD 269
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BLAST of mRNA_Ecto-sp9_F_contig11.875.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W4C5_9STRA)

HSP 1 Score: 225 bits (573), Expect = 9.490e-63
Identity = 111/187 (59.36%), Postives = 140/187 (74.87%), Query Frame = 1 
Query:    1 QVMDHDVYTTNDAIGLVYVDLSPLFMRTAERD--QESRDL----TVQGWFPLYDTLRGVRGALCLVIKVRFIGDQNPFRESSAGVQFFGVSTLNPELYTVQKVVGLVDELVVDNDPEYQWMDNFRQARTSNESRQSLLYKLDATVRRQLGKKVLDLGCNAVLAYQQDFDVEGDSGIVARAYGTACVI 543
            +VMDHDVY+ +D IG VY+ L PL    A+ D  QES +      + GWFP+YDTL G+RG L +++KVRF  D NPF+ESSAGV+FF  S L   +  +  V+G V+ELVVD+DPEY+W DNFR AR SNESRQ LLY+L   VRRQ+GKK+L+LG N+V+ YQQ+FDVEGDSG+VARA GTAC+I
Sbjct:   73 RVMDHDVYSADDLIGTVYIGLGPLLQMAADGDDGQESPNKFDEDQIDGWFPIYDTLNGIRGELHVIVKVRFYDDVNPFKESSAGVRFFATSVLESSVLRIDSVLGFVEELVVDSDPEYEWNDNFRTARKSNESRQGLLYRLSNQVRRQIGKKILELGGNSVVGYQQNFDVEGDSGLVARASGTACII 259
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BLAST of mRNA_Ecto-sp9_F_contig11.875.1 vs.
Match: Amino (Acid-Polyamine-Organocation (APC) Family n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D364_PHYNI)

HSP 1 Score: 220 bits (561), Expect = 1.280e-62
Identity = 111/181 (61.33%), Postives = 137/181 (75.69%), Query Frame = 1 
Query:    1 QVMDHDVYTTNDAIGLVYVDLSPLFMRTAERDQESRDLTVQGWFPLYDTLRGVRGALCLVIKVRFIGDQNPFRESSAGVQFFGVSTLNPELYTVQKVVGLVDELVVDNDPEYQWMDNFRQARTSNESRQSLLYKLDATVRRQLGKKVLDLGCNAVLAYQQDFDVEGDSGIVARAYGTACVI 543
            ++MDHDVYTT+  +G+VYVDL+ L MR            +QGWFP+YDTL GVR  L LVI++++ GD NPFRESSAGVQFFG+STL+P LY ++ ++G V+ELVV  DPEY W D+FR +R SNE RQ LLYKL + V   +GKK L+LG NAVLAY+Q FDVEGDSG+VARA GTAC I
Sbjct:   73 KLMDHDVYTTDATVGIVYVDLNCLLMRDGH--------VIQGWFPVYDTLLGVRCELSLVIRLQYFGDVNPFRESSAGVQFFGLSTLDPSLYRIESMLGFVEELVVHADPEYSWSDSFRTSRRSNEHRQLLLYKLSSQVATLVGKKALELGGNAVLAYKQFFDVEGDSGLVARACGTACYI 245
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11.875.1 vs.
Match: C2 (domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=H3HDG8_PHYRM)

HSP 1 Score: 221 bits (564), Expect = 3.350e-62
Identity = 112/181 (61.88%), Postives = 137/181 (75.69%), Query Frame = 1 
Query:    1 QVMDHDVYTTNDAIGLVYVDLSPLFMRTAERDQESRDLTVQGWFPLYDTLRGVRGALCLVIKVRFIGDQNPFRESSAGVQFFGVSTLNPELYTVQKVVGLVDELVVDNDPEYQWMDNFRQARTSNESRQSLLYKLDATVRRQLGKKVLDLGCNAVLAYQQDFDVEGDSGIVARAYGTACVI 543
            ++MDHDVYTT+  +G+VYVDL+ L MR            +QGWFP+YDTL GVR  L LVI++++ GD NPFRESSAGVQFFG+STL+P LY ++ ++G V+ELVV  DPEY W DNFR +R SNE RQ LLYKL + V   +GKK L+LG NAVLAY+Q FDVEGDSG+VARA GTAC I
Sbjct:   73 KLMDHDVYTTDATVGIVYVDLNCLLMRDGH--------VIQGWFPVYDTLLGVRCELSLVIRLQYFGDVNPFRESSAGVQFFGLSTLDPNLYRIESMLGFVEELVVHADPEYSWSDNFRTSRRSNEHRQLLLYKLSSQVVTLVGKKALELGGNAVLAYKQFFDVEGDSGLVARACGTACYI 245
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11.875.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
C22.460e-13697.07domain-containing protein n=1 Tax=Ectocarpus silic... [more]
C24.950e-6964.53domain-containing protein n=1 Tax=Tribonema minus ... [more]
C23.530e-6656.37domain-containing protein n=1 Tax=Bremia lactucae ... [more]
C22.940e-6560.43domain-containing protein n=2 Tax=Peronospora effu... [more]
C23.420e-6461.24domain-containing protein n=1 Tax=Aphanomyces asta... [more]
C23.450e-6354.84domain-containing protein n=1 Tax=Phytophthora meg... [more]
C25.380e-6355.61domain-containing protein n=1 Tax=Aphanomyces inva... [more]
Hypothetical9.490e-6359.36protein n=1 Tax=labyrinthulid quahog parasite QPX ... [more]
Amino1.280e-6261.33Acid-Polyamine-Organocation (APC) Family n=1 Tax=P... [more]
C23.350e-6261.88domain-containing protein n=14 Tax=Phytophthora Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11contigEcto-sp9_F_contig11:88967..91795 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score400.2
Seed ortholog evalue8.3e-109
Seed eggNOG ortholog2880.D7FIL9
Preferred nameC2CD5
KEGG koko:K20051
GOsGO:0000149,GO:0001505,GO:0001726,GO:0003674,GO:0005488,GO:0005509,GO:0005515,GO:0005543,GO:0005544,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005938,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006906,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007267,GO:0007268,GO:0007269,GO:0008104,GO:0008150,GO:0008286,GO:0008289,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0010638,GO:0010827,GO:0010828,GO:0012506,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016079,GO:0016192,GO:0017156,GO:0017157,GO:0017158,GO:0019905,GO:0023052,GO:0023061,GO:0030276,GO:0030659,GO:0031090,GO:0031252,GO:0031253,GO:0031256,GO:0031338,GO:0031340,GO:0031410,GO:0031982,GO:0032386,GO:0032388,GO:0032587,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032940,GO:0033036,GO:0033043,GO:0033157,GO:0034613,GO:0034762,GO:0034764,GO:0038028,GO:0042221,GO:0042886,GO:0042995,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043434,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0046324,GO:0046326,GO:0046872,GO:0046903,GO:0046907,GO:0048284,GO:0048489,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048791,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0055085,GO:0060341,GO:0060627,GO:0061024,GO:0061025,GO:0065002,GO:0065007,GO:0065008,GO:0070201,GO:0070727,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090087,GO:0090174,GO:0090313,GO:0090314,GO:0090316,GO:0097479,GO:0097480,GO:0097708,GO:0098590,GO:0098916,GO:0099003,GO:0099504,GO:0099536,GO:0099537,GO:0099568,GO:0099643,GO:0120025,GO:0120038,GO:1900076,GO:1900078,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1903305,GO:1903530,GO:1903533,GO:1903827,GO:1903829,GO:1904951,GO:1905475,GO:1905477,GO:1990778,GO:2001273,GO:2001275
EggNOG free text desc.insulin receptor signaling pathway via phosphatidylinositol 3-kinase
EggNOG OGsKOG1031@1,KOG1031@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionC2 domain
Ec32 orthologEc-27_000240.1
Exons5
Model size938
Cds size885
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928333.9367933-UTR-Ecto-sp9_F_contig11:88966..890131622928333.9367933-UTR-Ecto-sp9_F_contig11:88966..89013Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11 88967..89013 -
1692277837.0972524-UTR-Ecto-sp9_F_contig11:88966..890131692277837.0972524-UTR-Ecto-sp9_F_contig11:88966..89013Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11 88967..89013 -
1622928334.015168-UTR-Ecto-sp9_F_contig11:91789..917951622928334.015168-UTR-Ecto-sp9_F_contig11:91789..91795Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11 91790..91795 -
1692277837.1533222-UTR-Ecto-sp9_F_contig11:91789..917951692277837.1533222-UTR-Ecto-sp9_F_contig11:91789..91795Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11 91790..91795 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928333.949172-CDS-Ecto-sp9_F_contig11:89013..893011622928333.949172-CDS-Ecto-sp9_F_contig11:89013..89301Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11 89014..89301 -
1692277837.1121237-CDS-Ecto-sp9_F_contig11:89013..893011692277837.1121237-CDS-Ecto-sp9_F_contig11:89013..89301Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11 89014..89301 -
1622928333.964837-CDS-Ecto-sp9_F_contig11:89867..900321622928333.964837-CDS-Ecto-sp9_F_contig11:89867..90032Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11 89868..90032 -
1692277837.1233423-CDS-Ecto-sp9_F_contig11:89867..900321692277837.1233423-CDS-Ecto-sp9_F_contig11:89867..90032Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11 89868..90032 -
1622928333.9764154-CDS-Ecto-sp9_F_contig11:90477..906261622928333.9764154-CDS-Ecto-sp9_F_contig11:90477..90626Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11 90478..90626 -
1692277837.130702-CDS-Ecto-sp9_F_contig11:90477..906261692277837.130702-CDS-Ecto-sp9_F_contig11:90477..90626Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11 90478..90626 -
1622928333.9930692-CDS-Ecto-sp9_F_contig11:91091..911941622928333.9930692-CDS-Ecto-sp9_F_contig11:91091..91194Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11 91092..91194 -
1692277837.138305-CDS-Ecto-sp9_F_contig11:91091..911941692277837.138305-CDS-Ecto-sp9_F_contig11:91091..91194Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11 91092..91194 -
1622928334.004562-CDS-Ecto-sp9_F_contig11:91609..917891622928334.004562-CDS-Ecto-sp9_F_contig11:91609..91789Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11 91610..91789 -
1692277837.1459649-CDS-Ecto-sp9_F_contig11:91609..917891692277837.1459649-CDS-Ecto-sp9_F_contig11:91609..91789Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11 91610..91789 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11.875.1prot_Ecto-sp9_F_contig11.875.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig11 89014..91789 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig11.875.1

>prot_Ecto-sp9_F_contig11.875.1 ID=prot_Ecto-sp9_F_contig11.875.1|Name=mRNA_Ecto-sp9_F_contig11.875.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=295bp
MDHDVYTTNDAIGLVYVDLSPLFMRTAERDQESRDLTVQGWFPLYDTLRG
VRGALCLVIKVRFIGDQNPFRESSAGVQFFGVSTLNPELYTVQKVVGLVD
ELVVDNDPEYQWMDNFRQARTSNESRQSLLYKLDATVRRQLGKKVLDLGC
NAVLAYQQDFDVEGDSGIVARAYGTACVIQRREQHSDITKTSELFHTRQL
SAGHGGDGVGLSPGRRFHGAGGGGGGGGGGAGFVQDSGFSPVVCVRRTLC
CMRLLLVLGGFEVITWYKNVMERLYCTRTSCAWCFNIKERPLSV*
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mRNA from alignment at Ecto-sp9_F_contig11:88967..91795-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig11.875.1 ID=mRNA_Ecto-sp9_F_contig11.875.1|Name=mRNA_Ecto-sp9_F_contig11.875.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2829bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11:88967..91795- (Ectocarpus species9 EcSCA_722f female)
CAGGTGATGGACCACGACGTGTACACCACCAACGACGCCATCGGCTTGGT
CTACGTGGACCTCAGCCCCCTCTTCATGCGCACCGCGGAGCGGGACCAGG
AGAGCCGGGACCTTACGGTGCAGGGCTGGTTCCCGCTGTACGACACGCTT
CGAGGCGTGCGCGGCGCTCTCTGCCTCGTCATCAAGGTGCGCCCCCTGCC
TGCCGCAACGAGATGAACGGGCCATCTCTTGCCTTCAAACATCGATGTAT
ATCTTGATCTCGTTGATTTTGCGGCACAATGTTTTCGGGTGTTTGGAGGT
TGGGCCGTACCTTGTTTGGTACGTGTCGTGTCCTACCTGCCGCGACGAGA
TGAACGGACAAACGGATTATATCGTACCTTCAAACGCCCGTACCTTCATC
TCGTAATTTTTTTCGGCATAAGCGTTTTCGGGTATGTTGGTCGGTAACTT
ATTTGGGGAGACCCCCGTGCAACGTTGTTTCGAATAACCGTCGCACACGG
TCGATCCCTGTTTTGGCACTCACTTGCTTTGGCACCCACTTTGCGTACTT
TTCTCACGTCCTGGGCTTATTTCTCTCTCTCCCCCCGCCACACCACGAAA
GGTGCGGTTTATTGGGGATCAGAACCCTTTCAGGGAGTCTTCCGCCGGGG
TGCAGTTCTTCGGAGTGTCCACCCTGAACCCGGAGCTGTACACCGTGCAG
AAAGGTGAACGCCCGACTTCGCCCGACTTCGTTGTGGTGGTGATTGTTGT
TGTTGTTGTTGGTATTGTTGGTATTGTTGTTGGTATTGTTGGTATTGTTG
GTATTGTTGGTATTGTTGGTATTGTTGGTATTGTTGGTATTGTTGGTATT
GTTGGTATTGTTGGTATTGTTGGTATTGTTGGTGTTGTTGGTATTGTTGT
TGTTGTTGGTATTGTTGGTATTGTTGGTATTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGGTATTGTTGTTGGTATTGTTGTTGGTATTGTTGTGGTTGTG
GTTGTTTTTATTGCTGTTGTTGCTGTTGTTGTTGAGCGCCACCAAAATGG
GGTGGAACAGATGGTATTCTTCGATATGCCACCCGCTTGATCGGCCCATG
AGTATTGTGTGTGCCTGGTGATTCATTTCATGTCACGGTGCTTTCGTCAT
CGTCGATTTCCGATCAAAGTGGTGGGTCTTGTGGACGAGCTGGTAGTGGA
CAATGACCCGGAGTACCAGTGGATGGACAACTTTCGCCAGGCGCGCACGA
GCAACGAGAGCCGCCAGAGCCTGCTGTACAAGCTCGACGCCACCGTCCGC
CGACAACTAGGGAAGAAAGTGAGTTGTGTTTTGGGGGGGCGAGGATTACG
GATGGTGGGAATGAAGGGGCGTAACCCCCCCCCCGCTCTCTCTGAAAATT
GTTCCTCTTCCGCGCACATCGTTCTACAGTCTGTTGTTGGTTGTGTTGTT
CTGTTCTATTAGCGTCTGCCTTTTCTTCTTGCCGCAGCCGCCGCCCCTCC
CTTGTCCAAATGACAGGCTTTTGGTTCCCAGATTCCACGCGGCAGTGTTT
CTTTCGCTTGCAGGCAGTTTCTTTTTTAGCAATCGGGCTGTTTTGGCGGC
TCCCTGCCTTGTTCTGCCTACTAGTCTTGCCGCTGGTCGCAGTGCTGCTT
CTGTTGCTGGAGCAGCAGCAGCAGATGATGATGATGATGATGATGAGATT
GCTCTTGCCTGCCCTGTAACCATTTGCAATGGTTCCTCCTTGCTGCCTCA
CTTCACGACACAGGTGCTAGATCTCGGGTGCAACGCGGTGCTGGCCTACC
AGCAGGACTTCGACGTCGAGGGAGACAGCGGGATCGTGGCTCGGGCATAC
GGCACCGCCTGCGTCATACAGCGGCGAGAGCAGCACTCTGACATCACCAA
GACCAGCGAACTCTTTCACACTCGCCAGGTATCTATCTCTCCTAACCATG
TGGGTTGTACCTACAATCTTGTGTGGTACACGGTAGGTCAGTTGTTGTTG
TTGTTGTTGTTGTTGTTATTGCTGTCGCTGTTGTCGTTGTCATTGTTGTT
GTTTGTGTTGCGGGTGCTGTCGTCGTCGACGTCGTCGCTGCCATTGTTCA
ATCAGAGCCGACGTGTGTTCCCCCAAAGGTCTTGCGGCTCCGAACGCCTT
CCCTCCCCTAGCTACGCTTCTCGTTCGTGAGAGGTTCTCTTCCGTTCTCC
TCTTGAGCATTTTCGCGGCTAGCTTTTTATCACCGAAATTCTCAAGCACG
ACACAAGCCCGTCTTTTTGCGCGATTCAACTTATTGACGCTGTCTCAGGT
GTTGCGGCGGCTGTCCTGCCCACCCAACGGCCTGCTCGCTGGTCTCTCTG
TCGCTTTTCGGACGAGTTAGCCGTACGCCCAACACTTCGTTCAGGCAGTC
GCTGTTTGTTTTGTCACTCCCACATTTGTGCAGGCATGAGCAACATTTCT
CTGAGTTCGTGCTTTTATTTTTCAATCCTGTCTCATGTGCGCAGCTATCC
GCAGGACACGGGGGGGACGGCGTTGGTCTATCCCCGGGCAGGCGTTTTCA
TGGTGCCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGCAGGCTTCGTCC
AAGACTCGGGGTTCTCCCCCGTGGTGTGTGTTCGACGCACGCTTTGCTGT
ATGCGGCTGCTGCTCGTACTTGGTGGTTTTGAAGTTATAACGTGGTACAA
AAACGTCATGGAGAGACTGTACTGTACTCGTACAAGTTGTGCGTGGTGCT
TCAACATCAAAGAAAGACCGCTGTCCGTTTGAGACAAGGCCCCGTTCGAA
GGGATGTGTGCGTTAGGACACCGGTCGGT
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11:88967..91795-

>mRNA_Ecto-sp9_F_contig11.875.1 ID=mRNA_Ecto-sp9_F_contig11.875.1|Name=mRNA_Ecto-sp9_F_contig11.875.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1770bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11:88967..91795- (Ectocarpus species9 EcSCA_722f female)
ATGGACCACGACGTGTACACCACCAACGACGCCATCGGCTTGGTCTACGT
GGACCTCAGCCCCCTCTTCATGCGCACCGCGGAGCGGGACCAGGAGAGCC
GGGACCTTACGGTGCAGGGCTGGTTCCCGCTGTACGACACGCTTCGAGGC
GTGCGCGGCGCTCTCTGCCTCGTCATCAAGATGGACCACGACGTGTACAC
CACCAACGACGCCATCGGCTTGGTCTACGTGGACCTCAGCCCCCTCTTCA
TGCGCACCGCGGAGCGGGACCAGGAGAGCCGGGACCTTACGGTGCAGGGC
TGGTTCCCGCTGTACGACACGCTTCGAGGCGTGCGCGGCGCTCTCTGCCT
CGTCATCAAGGTGCGGTTTATTGGGGATCAGAACCCTTTCAGGGAGTCTT
CCGCCGGGGTGCAGTTCTTCGGAGTGTCCACCCTGAACCCGGAGCTGTAC
ACCGTGCAGAAAGGTGCGGTTTATTGGGGATCAGAACCCTTTCAGGGAGT
CTTCCGCCGGGGTGCAGTTCTTCGGAGTGTCCACCCTGAACCCGGAGCTG
TACACCGTGCAGAAAGTGGTGGGTCTTGTGGACGAGCTGGTAGTGGACAA
TGACCCGGAGTACCAGTGGATGGACAACTTTCGCCAGGCGCGCACGAGCA
ACGAGAGCCGCCAGAGCCTGCTGTACAAGCTCGACGCCACCGTCCGCCGA
CAACTAGGGAAGAAATGGTGGGTCTTGTGGACGAGCTGGTAGTGGACAAT
GACCCGGAGTACCAGTGGATGGACAACTTTCGCCAGGCGCGCACGAGCAA
CGAGAGCCGCCAGAGCCTGCTGTACAAGCTCGACGCCACCGTCCGCCGAC
AACTAGGGAAGAAAGTGCTAGATCTCGGGTGCAACGCGGTGCTGGCCTAC
CAGCAGGACTTCGACGTCGAGGGAGACAGCGGGATCGTGGCTCGGGCATA
CGGCACCGCCTGCGTCATACAGCGGCGAGAGCAGCACTCTGACATCACCA
AGACCAGCGAACTCTTTCACACTCGCCAGGTGCTAGATCTCGGGTGCAAC
GCGGTGCTGGCCTACCAGCAGGACTTCGACGTCGAGGGAGACAGCGGGAT
CGTGGCTCGGGCATACGGCACCGCCTGCGTCATACAGCGGCGAGAGCAGC
ACTCTGACATCACCAAGACCAGCGAACTCTTTCACACTCGCCAGCTATCC
GCAGGACACGGGGGGGACGGCGTTGGTCTATCCCCGGGCAGGCGTTTTCA
TGGTGCCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGCGCAGGCTTCGTCC
AAGACTCGGGGTTCTCCCCCGTGGTGTGTGTTCGACGCACGCTTTGCTGT
ATGCGGCTGCTGCTCGTACTTGGTGGTTTTGAAGTTATAACGTGGTACAA
AAACGTCATGGAGAGACTGTACTGTACTCGTACAAGTTGTGCGTGGTGCT
TCAACATCAAAGAAAGACCGCTGTCCGTTTGACTATCCGCAGGACACGGG
GGGGACGGCGTTGGTCTATCCCCGGGCAGGCGTTTTCATGGTGCCGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGCGCAGGCTTCGTCCAAGACTCGGGGT
TCTCCCCCGTGGTGTGTGTTCGACGCACGCTTTGCTGTATGCGGCTGCTG
CTCGTACTTGGTGGTTTTGAAGTTATAACGTGGTACAAAAACGTCATGGA
GAGACTGTACTGTACTCGTACAAGTTGTGCGTGGTGCTTCAACATCAAAG
AAAGACCGCTGTCCGTTTGA
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