mRNA_Ecto-sp9_F_contig10969.841.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10969.841.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSF0_ECTSI) HSP 1 Score: 372 bits (954), Expect = 1.110e-127 Identity = 193/195 (98.97%), Postives = 195/195 (100.00%), Query Frame = 1
Query: 1 QANLQQAEEADAGPAVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNILTKAFRQRAKVVLADGSETSEAPDVAPPKFIETVKGIIRNFGNVGESELGFAQQLDDMISEAEQVATELYGESQSPQDMQDRAWKDATVSVFDLENMEEDGQLRGEEMPWANDKYDGMTPEMVKNFKQDEDGNLQIGGT 585
QANLQQAEEADAGPAVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNILTKAFRQRAKVVLADGSETSEAPDVAPPKFIETVKGIIRNFGNVGESELGFAQQLDDMISEAEQVATELYGESQSPQDMQDRAWKDATVSVFDLENMEEDG+LRGE+MPWANDKYDGMTPEMVKNFKQDEDGNLQIGGT
Sbjct: 151 QANLQQAEEADAGPAVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNILTKAFRQRAKVVLADGSETSEAPDVAPPKFIETVKGIIRNFGNVGESELGFAQQLDDMISEAEQVATELYGESQSPQDMQDRAWKDATVSVFDLENMEEDGKLRGEDMPWANDKYDGMTPEMVKNFKQDEDGNLQIGGT 345
BLAST of mRNA_Ecto-sp9_F_contig10969.841.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLR4_9STRA) HSP 1 Score: 179 bits (455), Expect = 3.190e-52 Identity = 103/199 (51.76%), Postives = 133/199 (66.83%), Query Frame = 1
Query: 1 QANLQQAEEADAGP----AVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNILTKAFRQRAKVVLADGSETSEAPDVAPPKFIETVKGIIRNFGNVGESELGFAQQLDDMISEAEQVATELYGESQSPQDMQDRAWKDATVSVFDLENMEEDGQLRGEEMPWANDKYDGMTPEMVKNFKQDEDGNLQIGGT 585
+ANLQ+A +A GP AV VL + QA +D K++PEKRL++Q LR E +L +AFR R K+ LA+ E+S+ P VAPP FI V+ + NFGNVGE E FA ++D +IS AE+VAT LYGES SP+D QDRAW++ SV+DLE +E D LRGEEMPWANDKYD M P + K D+ G +IGG+
Sbjct: 148 EANLQEAHKA--GPQGAGAVRVLTNVKNILQAEIDRKLEPEKRLLKQCLRCDTAEEMEAVLHEAFRPRVKLQLAENKESSDEPLVAPPAFIAAVRNLKLNFGNVGEDETEFADKVDVIISTAEKVATALYGESMSPKDQQDRAWREHGASVWDLEKLENDAMLRGEEMPWANDKYDTMLPNLNKG---DKSGEFKIGGS 341
BLAST of mRNA_Ecto-sp9_F_contig10969.841.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TEP8_9STRA) HSP 1 Score: 155 bits (391), Expect = 5.880e-41 Identity = 86/192 (44.79%), Postives = 121/192 (63.02%), Query Frame = 1
Query: 7 NLQQAEEADAGPAVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNILTKAFRQRAKVVLADGSETSEAPDVAPPKFIETVKGIIRNFGNVGESELGFAQQLDDMISEAEQVATELYGESQSPQDMQDRAWKDATVSVFDLENMEEDGQLRGEEMPWANDKYDGMTPEMVKNFKQDEDGNLQIGG 582
N+QQAE A A PA + ++L A A+ A+DEK+ RLVR+LLR D E R IL AFR +A + A+G++T PDV PP FIE ++ +I+NFGN+ FA++L ++ EAE+V+T +YG++ S ++ QD W+ ++SVFDLE +E Q G++MPW ND YD M P EDG IGG
Sbjct: 350 NVQQAERAGAAPAAELFRKLLATAREAIDEKLSMSTRLVRRLLRVADPEKRKEILHDAFRPKASALTAEGAKTGAMPDVPPPDFIEELRQLIKNFGNIETD--NFAEKLRTLVEEAEEVSTTIYGKAMSHREQQDYMWQKGSISVFDLEALEGKAQAVGDQMPWQNDAYDNMMPPGF------EDGVRTIGG 533
BLAST of mRNA_Ecto-sp9_F_contig10969.841.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1M7L3_9STRA) HSP 1 Score: 145 bits (366), Expect = 3.220e-38 Identity = 86/207 (41.55%), Postives = 118/207 (57.00%), Query Frame = 1
Query: 7 NLQQAEEADAGPAVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNILTKAFRQRAKVVLADGS--------------ETSEAPDVAPPKFIETVKGIIRNFGNVGE-SELGFAQQLDDMISEAEQVATELYGESQSPQDMQDRAWKDATVSVFDLENMEEDGQLRGEEMPWANDKYDGMTPEMVKNFKQDEDGNLQIGG 582
N+ QA++A A V++ L Q+ +D K+DPEK+L+RQLLR D AR +L AF+ + VLA + E+ +APDVAPP FI K +I FGN+ + S A +L + EAE VAT +YGES + ++ QD+ W + T+SVFDLE +E + +GE MPW ND YD MTP V K G + IGG
Sbjct: 221 NILQAKQAGVAQAAQVMEGLLQVCQSEVDRKMDPEKKLLRQLLRTDDTNARKKMLEAAFKPKEAFVLASSADQNVIQGGGSSGQQESKKAPDVAPPAFIAECKAVIEQFGNIEDTSNAALADRLRKITDEAEGVATSIYGESMTAREQQDKMWNEGTISVFDLEKIENAAEAQGEAMPWKNDGYDHMTPVDVLTQK----GKIDIGG 423
BLAST of mRNA_Ecto-sp9_F_contig10969.841.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQV3_9STRA) HSP 1 Score: 140 bits (354), Expect = 8.100e-36 Identity = 77/171 (45.03%), Postives = 113/171 (66.08%), Query Frame = 1
Query: 4 ANLQQAEEADAGPAVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNILTKAFRQRAKVVLADGSETSEA-PDVAPPKFIETVKGIIRNFGNVGESELGFA--QQLDDMISEAEQVATELYGESQSPQDMQDRAWKDATVSVFDLENMEEDGQLRGEEMPWAND 507
AN+ QA+ A A V++RL A+ LD K P ++L+ +LLR + RE R+ IL KAF ++ L+ + SE PDV PP FIE KGIIRNFGN+ E E G +++ + ++EAEQV+T +YGES + ++ QDR WKD T+S++DLE +E+ +++GE+MPW D
Sbjct: 348 ANIDQAQAAGAKEPAEVMERLLTRARLVLDNKKSPAQKLLSELLRTESRETRIEILEKAFTPHEQIFLSATDDASEPMPDVNPPDFIEAAKGIIRNFGNM-EIEKGVTVMERVTECVAEAEQVSTSIYGESMTAEEQQDRMWKDGTISIWDLETLEQQAEIQGEQMPWHQD 517
BLAST of mRNA_Ecto-sp9_F_contig10969.841.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX23_AURAN) HSP 1 Score: 126 bits (316), Expect = 4.310e-30 Identity = 74/185 (40.00%), Postives = 116/185 (62.70%), Query Frame = 1
Query: 1 QANLQQAEEADAGPA----VGVLKRLGAAAQAALDEK-VDPEKRLVRQLLRAKDREARLNILTKAFRQRAKVVLA---DGSETSEAPDVAPPKFIETVKGIIRNFGNVGESELGFAQQLDDMISEAEQVATELYGESQSPQDMQDRAWKDATVSVFDLENMEEDGQLRGEEMPWANDKYDGMTPE 531
+AN QQA A AGPA ++K L + + +D++ PE RL+R LLR+ D + R +L +AF + + L D + T+E +V PPKFI+ +I +FGNV ++ A ++ + ++AE+VATEL+G+ SP+ +QD+ W +AT SVFDLE +E + +GE +PW++D+YD M PE
Sbjct: 606 EANRQQA--AAAGPAGAQAAELMKNLASRCRDEMDKRETGPEIRLLRALLRSDDEDTRKQLLVRAFEPKEAIALGFGDDAATTAEGVEVEPPKFIDACLKLIADFGNVDDNGAPLADRVRAIAAQAEKVATELFGDCDSPRALQDKMWNEATTSVFDLEAVEMAAEAQGENVPWSDDRYDDMLPE 788
BLAST of mRNA_Ecto-sp9_F_contig10969.841.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6NVR4_9RHOD) HSP 1 Score: 115 bits (288), Expect = 6.260e-29 Identity = 67/173 (38.73%), Postives = 109/173 (63.01%), Query Frame = 1
Query: 7 NLQQAEEADAGPAVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNILTKAFRQRAKVVLADGSETSEAPDVAPPKFIETVKGIIRNFGNVGESELGFAQQLDDMISEAEQVATELYGESQSP-QDMQDRAWKDATVSVFDLENMEEDGQLRGEEMPWANDKYDGM 522
NL+QA++A AV L+ + A + LDE V PE RLVR+LLR + +AR ++T AF+ + +L D +E+S V KF++T+ +++NFGN+ E GF Q L + +EAE++A +LYG + +++QD A++ TVSV++LE ME +++G++ PW N + G
Sbjct: 13 NLEQAKKAGVEKAVQALQEVQKQAISILDESVTPELRLVRKLLREPNVDARNALITDAFKSKGTFILDDETESSAGSAVDAKKFVQTMSNLMKNFGNMEE---GFQQNLKRIAAEAEEIAKDLYGYKEKDIKELQDEAFEKRTVSVWELEQMEMQSEMQGQDAPWENPRAAGF 182
BLAST of mRNA_Ecto-sp9_F_contig10969.841.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3F7_9STRA) HSP 1 Score: 121 bits (304), Expect = 6.730e-29 Identity = 75/187 (40.11%), Postives = 103/187 (55.08%), Query Frame = 1
Query: 4 ANLQQAEEADAGPAVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDREARLNILTKAFRQRAKVVLA-DGSETSEAPDVAPPKFIETVKGIIRNFGNVGESELGFAQQLDD-----------MISEAEQVATELYGESQSPQDMQDRAWKDATVSVFDLENMEEDGQLRGEEMPWANDKYDGMTP 528
AN QQA+ A A A ++ L + LD DP K+L+R LLR AR ++ +AF + + L DG++T DV PP FI + +I +FGN+ EL Q D + +AE +A EL+GES SP++ QDRAW +AT SVFDLE E + +G+ MPW ND+YD M P
Sbjct: 303 ANRQQAQAAGAKDAANLMNNLANKCRDELDRNFDPPKKLLRALLRCDTPSARETLIRRAFEPKEAIALGFDGAQTKGGCDVEPPDFIAACQTLIADFGNL---ELDSTTQTDTNNFLLADKVRAIAEQAEAIAIELFGESLSPREQQDRAWNEATTSVFDLEAAELAAETQGDRMPWQNDEYDDMLP 486
BLAST of mRNA_Ecto-sp9_F_contig10969.841.1 vs.
Match: Hypothetical (protein n=2 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKR3_9STRA) HSP 1 Score: 116 bits (290), Expect = 7.540e-29 Identity = 79/211 (37.44%), Postives = 118/211 (55.92%), Query Frame = 1
Query: 1 QANLQQAEEADAGPAVGVLKRLGAAAQAALDEKVDPEK-RLVRQLLRAKDREARLNILTKAFRQRAKVVLA----------DGSETSE---APDVAPPKFIETVKGIIRNFGNVG-ESELG-FAQQLDDMISEAEQVATELYGESQSPQDMQDRAWKDATVSVFDLENMEEDGQLRGEEMPWANDKYDGMTPEMVKNFKQDEDGNLQIGGT 585
+AN QA +A A ++KRL A D++V ++ RL+R+LLRA++ + R IL AF + +++A DG + + PDV PP FI K ++ NFGN+ + + G A ++ + SEAE VAT +YG+ S ++ QDR W+D T S+FDLE ME + + RGE PW N D ++ F D DG +QIGG+
Sbjct: 18 EANETQARDAGAAGPANLMKRLRERAAEEKDKQVSSKEIRLIRKLLRAENSQEREAILEDAFTPKENLLVAGTPENAMKAIDGEQPEQDKAMPDVPPPDFINACKAVMLNFGNLSYDDDRGDLASRIKQIASEAEVVATRIYGQGMSLREQQDRMWEDETTSIFDLEKMELEAEARGENAPWTNPDEDDNA--ILPGF--DLDGKMQIGGS 224
BLAST of mRNA_Ecto-sp9_F_contig10969.841.1 vs.
Match: Uncharacterized (protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLU1_FISSO) HSP 1 Score: 118 bits (295), Expect = 1.390e-27 Identity = 79/211 (37.44%), Postives = 113/211 (53.55%), Query Frame = 1
Query: 1 QANLQQAEEADAGPAVGVLKRLGAAAQAALDEKVDPEK-RLVRQLLRAKDREARLNILTKAFRQRAKVVLADGSETSE-------------APDVAPPKFIETVKGIIRNFGNVG---ESELGFAQQLDDMISEAEQVATELYGESQSPQDMQDRAWKDATVSVFDLENMEEDGQLRGEEMPWANDKYDGMTPEMVKNFKQDEDGNLQIGG 582
+AN QA A A ++KRL A D+++ ++ RL+R+LLR D AR IL AF + +++ +E ++ PDV PP FI K ++ NFGN+G E+ A ++ + SEAE VAT +YG+ S ++ QDR WKD T S+FDLE ME + + GE PW+N D M + F D DG +QIGG
Sbjct: 311 EANENQARIAGANGPAELMKRLRLRAADEKDKQLSSKEIRLIRKLLRTDDAAAREQILEDAFTPKTVLLVPGTAENAQKAVDGEAPDQEKPVPDVPPPDFINACKAVLLNFGNLGSDDENRGDLASRIKKLASEAEVVATRIYGQGMSVREYQDRVWKDQTTSIFDLERMEIEAERNGEVAPWSNPDADDM---FMPGF--DSDGRMQIGG 516 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10969.841.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10969.841.1 >prot_Ecto-sp9_F_contig10969.841.1 ID=prot_Ecto-sp9_F_contig10969.841.1|Name=mRNA_Ecto-sp9_F_contig10969.841.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=196bp QANLQQAEEADAGPAVGVLKRLGAAAQAALDEKVDPEKRLVRQLLRAKDRback to top mRNA from alignment at Ecto-sp9_F_contig10969:480..4089+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10969.841.1 ID=mRNA_Ecto-sp9_F_contig10969.841.1|Name=mRNA_Ecto-sp9_F_contig10969.841.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3610bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10969:480..4089+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10969:480..4089+ >mRNA_Ecto-sp9_F_contig10969.841.1 ID=mRNA_Ecto-sp9_F_contig10969.841.1|Name=mRNA_Ecto-sp9_F_contig10969.841.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1176bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10969:480..4089+ (Ectocarpus species9 EcSCA_722f female)back to top |