mRNA_Ecto-sp9_F_contig10959.835.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10959.835.1
Unique NamemRNA_Ecto-sp9_F_contig10959.835.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig10959.835.1 vs.
Match: RCK (N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW2_9PHAE)

HSP 1 Score: 461 bits (1187), Expect = 1.300e-154
Identity = 255/258 (98.84%), Postives = 256/258 (99.22%), Query Frame = 1
Query:    1 VLLCTLAFAAFPFLGGVDVLEVIFHSPADLVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQGGTDTALSEQLLLVALTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDPTLLVEQWPTVTGLLLGLVTFKSIIISSASLGFGLSAPEAAKTG 774
            VLLCTLAFAAFPFLGGVDVLEVIFHSPA+LVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQGGTDTALSEQLLLV LTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDP LLVEQWPTVTGLLLGLVTFKSIIISSASLGFGLSAPEAAKTG
Sbjct:  262 VLLCTLAFAAFPFLGGVDVLEVIFHSPAELVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQGGTDTALSEQLLLVGLTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDPQLLVEQWPTVTGLLLGLVTFKSIIISSASLGFGLSAPEAAKTG 519          
BLAST of mRNA_Ecto-sp9_F_contig10959.835.1 vs.
Match: Na_H_Exchanger (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEI4_ECTSI)

HSP 1 Score: 462 bits (1190), Expect = 1.350e-154
Identity = 255/258 (98.84%), Postives = 257/258 (99.61%), Query Frame = 1
Query:    1 VLLCTLAFAAFPFLGGVDVLEVIFHSPADLVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQGGTDTALSEQLLLVALTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDPTLLVEQWPTVTGLLLGLVTFKSIIISSASLGFGLSAPEAAKTG 774
            VLLCTLAFAAFPFLGGVDVLEV+FHSPA+LVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQGGTDTALSEQLLLVALTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDP LLVEQWPTVTGLLLGLVTFKSIIISSASLGFGLSAPEAAKTG
Sbjct:  473 VLLCTLAFAAFPFLGGVDVLEVVFHSPAELVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQGGTDTALSEQLLLVALTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDPMLLVEQWPTVTGLLLGLVTFKSIIISSASLGFGLSAPEAAKTG 730          
BLAST of mRNA_Ecto-sp9_F_contig10959.835.1 vs.
Match: K(+) (efflux antiporter 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF36_9STRA)

HSP 1 Score: 314 bits (804), Expect = 2.570e-98
Identity = 178/258 (68.99%), Postives = 207/258 (80.23%), Query Frame = 1
Query:    1 VLLCTLAFAAFPFLGGVDVLEVIFHSPADLVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQGGTDTALSEQLLLVALTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDPTLLVEQWPTVTGLLLGLVTFKSIIISSASLGFGLSAPEAAKTG 774
            VLLCT AF AFPF+GGV +LE++F SP  LV+I R+DEAVVIGAALSLSSSAFVLKILQEKG    R G+A LG+LLLQDIAVVPLLVLLPIIE Q   D  L  Q  ++ALT  K +GGL GILV GR +LR LF+ VA ARS+ETFVALCLLVA+G+G+LT+++GLS+TLGAF AGTLLAETNYR QVEA+IAPFRGLLLGLFF TTGA+VDP LL+EQWPTV GLL GL+  K +I S     FGL+  E+ + G
Sbjct:  202 VLLCTAAFGAFPFVGGVQLLELVFKSPDALVNISRLDEAVVIGAALSLSSSAFVLKILQEKGLLRGRAGQATLGVLLLQDIAVVPLLVLLPIIENQQR-DVPLGLQASMLALTAVKAIGGLAGILVLGRVILRRLFEAVAAARSTETFVALCLLVAIGIGELTDSLGLSSTLGAFIAGTLLAETNYRMQVEADIAPFRGLLLGLFFMTTGASVDPGLLLEQWPTVIGLLGGLLLIKGVITSLVCPLFGLTKGESVRVG 458          
BLAST of mRNA_Ecto-sp9_F_contig10959.835.1 vs.
Match: Sodium/hydrogen (exchanger family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEK7_9STRA)

HSP 1 Score: 296 bits (757), Expect = 2.680e-93
Identity = 174/262 (66.41%), Postives = 200/262 (76.34%), Query Frame = 1
Query:    1 VLLCTLAFAAFPF--LGGVDVLEVIFHSPADLVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQ--GGTDTALSEQLLLVALTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDPTLLVEQWPTVTGLLLGLVTFKSIIISSASLGFGLSAPEAAKTG 774
            VLLCTLAF AFPF     V ++E IF SP  LV+I R+DE+VVIGAALSLSSSAFVLKILQEKG  + R G+A LG+LLLQDIAVVPLLVLLPIIE Q  G  D  L  Q  ++     K VGGLG ILV GRFLLR LFD VA  RS+E FVALCLLVA+G+G++T+A+GLS +LGAF AGTLLAETNYR QVEA+IAPFRGLLL LFF TTGA+VDP +L EQWPTV GLL GL+  K II S+    FGL+  E+ + G
Sbjct:  103 VLLCTLAFGAFPFGEQSSVQLMESIFKSPDSLVNISRLDESVVIGAALSLSSSAFVLKILQEKGLLSGRAGQATLGVLLLQDIAVVPLLVLLPIIENQQAGAGDVPLMAQAAVLGGIALKAVGGLGAILVFGRFLLRRLFDGVAATRSTEAFVALCLLVAIGIGEVTDAMGLSASLGAFVAGTLLAETNYRMQVEADIAPFRGLLLALFFMTTGASVDPHMLWEQWPTVLGLLTGLLLVKGIITSTLGPLFGLTKGESVRVG 364          
BLAST of mRNA_Ecto-sp9_F_contig10959.835.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH40_9STRA)

HSP 1 Score: 271 bits (692), Expect = 8.020e-83
Identity = 157/260 (60.38%), Postives = 193/260 (74.23%), Query Frame = 1
Query:    1 VLLCTLAFAAFPFLGGVDVLEVIFHSPADLVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQ-GGTDTALSEQLLLVALTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDPTLLVEQWPTVTGLLLGLVTFKSIIISSASLG-FGLSAPEAAKTG 774
            V+LCT+AF  FPF GGV++LEV+FHS   LVSI R DEA++IG+ALSLSSSAFVLK+LQEK  + AR G A LGILLLQD+AVVPLL L+P+IE+Q  GT T      L    T    +G LGG+L  G  +LR +F +VA  RSSE FVA+ LLVALGMG+ T+ +GLS+TLGAFAAG LLAETNY+ Q+EA+I PFRGL+LGLFF  TGATVDP +++  +PT  GLL GL+ FK+ IIS+   G FGL   EA + G
Sbjct:  186 VILCTIAFGVFPFTGGVELLEVVFHSRPALVSITRPDEALIIGSALSLSSSAFVLKVLQEKNLQNARTGAASLGILLLQDLAVVPLLALIPVIESQLYGTGTVAGFDEL--GRTALVELGALGGVLAIGSLVLRRVFALVANTRSSEAFVAMTLLVALGMGEFTDKLGLSSTLGAFAAGALLAETNYKAQIEADIQPFRGLMLGLFFMVTGATVDPFVVMRDFPTFLGLLGGLILFKATIISALGYGLFGLEKEEAVRVG 443          
BLAST of mRNA_Ecto-sp9_F_contig10959.835.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UF61_HEMAN)

HSP 1 Score: 270 bits (691), Expect = 1.520e-81
Identity = 153/258 (59.30%), Postives = 185/258 (71.71%), Query Frame = 1
Query:    1 VLLCTLAFAAFPFLGGVDVLEVIFHSPADLVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQGGTDTALSEQLLLVALTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDPTLLVEQWPTVTGLLLGLVTFKSIIISSASLGFGLSAPEAAKTG 774
            V L T AF A PFLGG  +LE +F +  DLVSI+++DEA VIGAAL+LSSSAFVLKILQEKGQ  +  GRA LG+LLLQDIAVVPLLVLLPI+E Q    TA       +       +GG+  +L  G  +L  +F+ VAGARSSETF+ALCLL     G  T+ IGLS TLGAF AG LLAETNYRTQVEA+I PFRG+LLGLFF TTGA+VD  LLV++WPT  G+L+GL++ K+ I    +  FGLS  +A +TG
Sbjct:  104 VALTTAAFTAVPFLGGSQILESVFGASQDLVSIKQLDEAFVIGAALALSSSAFVLKILQEKGQLGSPTGRAALGVLLLQDIAVVPLLVLLPIVELQNEVATAAEGASQDLGTLFGTAIGGVTALLAFGYIVLPKIFNAVAGARSSETFIALCLLTVAAAGTFTKTIGLSDTLGAFIAGILLAETNYRTQVEADIQPFRGILLGLFFVTTGASVDLPLLVQEWPTALGVLIGLISIKAAITGGLATNFGLSKGDAVRTG 361          
BLAST of mRNA_Ecto-sp9_F_contig10959.835.1 vs.
Match: K(+) (efflux antiporter 3, chloroplastic isoform X3 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E446FD)

HSP 1 Score: 263 bits (672), Expect = 2.470e-80
Identity = 156/262 (59.54%), Postives = 193/262 (73.66%), Query Frame = 1
Query:    1 VLLCTLAFAAF--PFLG--GVDVLEVIFHSPADLVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQGGTDTALSEQLLLVALTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDPTLLVEQWPTVTGLLLGLVTFKSIIISSASLGFGLSAPEAAKTG 774
            V+LCTLAFAAF  P  G  G  VLE +FHS  DLV+IR VDEA+VIGAALSLSSSAFVL++L EKG+   RFG A LGILLLQDIAVVPLLV+LPI+E+Q   + ++   L   +L   K +GGLG + + G+FLLR +F+VVA +RSSE FVALCLL   G   LT+A+G S TLGAF AG LLAETN+RTQ+EA+I PFRGLLLGLFF TTG ++D  LLV +WP V  LL GL+  K++II++     GL+  E+ + G
Sbjct:  198 VVLCTLAFAAFELPPNGAIGTKVLEFLFHSRPDLVNIRSVDEAIVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPILESQNLGNESIWPTLAAESL---KALGGLGLLSLGGKFLLRRIFEVVAESRSSEAFVALCLLTVAGTSLLTQALGFSDTLGAFLAGALLAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQLLVREWPNVLTLLTGLIVIKTLIITAIGPRVGLTLQESIRIG 456          
BLAST of mRNA_Ecto-sp9_F_contig10959.835.1 vs.
Match: K(+) (efflux antiporter 3, chloroplastic isoform X1 n=2 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E3ADD8)

HSP 1 Score: 263 bits (672), Expect = 3.680e-79
Identity = 156/262 (59.54%), Postives = 193/262 (73.66%), Query Frame = 1
Query:    1 VLLCTLAFAAF--PFLG--GVDVLEVIFHSPADLVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQGGTDTALSEQLLLVALTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDPTLLVEQWPTVTGLLLGLVTFKSIIISSASLGFGLSAPEAAKTG 774
            V+LCTLAFAAF  P  G  G  VLE +FHS  DLV+IR VDEA+VIGAALSLSSSAFVL++L EKG+   RFG A LGILLLQDIAVVPLLV+LPI+E+Q   + ++   L   +L   K +GGLG + + G+FLLR +F+VVA +RSSE FVALCLL   G   LT+A+G S TLGAF AG LLAETN+RTQ+EA+I PFRGLLLGLFF TTG ++D  LLV +WP V  LL GL+  K++II++     GL+  E+ + G
Sbjct:  198 VVLCTLAFAAFELPPNGAIGTKVLEFLFHSRPDLVNIRSVDEAIVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPILESQNLGNESIWPTLAAESL---KALGGLGLLSLGGKFLLRRIFEVVAESRSSEAFVALCLLTVAGTSLLTQALGFSDTLGAFLAGALLAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQLLVREWPNVLTLLTGLIVIKTLIITAIGPRVGLTLQESIRIG 456          
BLAST of mRNA_Ecto-sp9_F_contig10959.835.1 vs.
Match: RCK (N-terminal domain-containing protein n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835Q873_VANPL)

HSP 1 Score: 259 bits (661), Expect = 5.450e-79
Identity = 151/262 (57.63%), Postives = 191/262 (72.90%), Query Frame = 1
Query:    1 VLLCTLAFAAF--PFLG--GVDVLEVIFHSPADLVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQGGTDTALSEQLLLVALTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDPTLLVEQWPTVTGLLLGLVTFKSIIISSASLGFGLSAPEAAKTG 774
            V+LCT+AF AF  P  G  G  +LE  FHS  DLV+IR VDEA+VIGAALSLSSSAFVL++L EKG+   RFG A LGILLLQDIAVVPLLV+LPI+E+Q   + +L   L   +L   K +GGLG + + G++L+R +F+VVA +RSSE FVALCLL   G   LT+A+G S TLGAF AG +LAETN+RTQ+EA+I PFRGLLLGLFF TTG ++D  LL+ +WP V  LL GL+  K++IIS+     GL+  E+ + G
Sbjct:  184 VILCTIAFTAFELPPNGAVGTRILEFFFHSRPDLVNIRSVDEAIVIGAALSLSSSAFVLQLLAEKGELPTRFGSATLGILLLQDIAVVPLLVILPILESQNLVNESLWPMLATESL---KALGGLGLLSLGGKYLIRRVFEVVADSRSSEAFVALCLLTVSGTSLLTQALGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQLLLREWPNVLSLLAGLLVIKTLIISAIGPRVGLTLQESVRIG 442          
BLAST of mRNA_Ecto-sp9_F_contig10959.835.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8T7_9STRA)

HSP 1 Score: 261 bits (668), Expect = 7.100e-79
Identity = 154/259 (59.46%), Postives = 189/259 (72.97%), Query Frame = 1
Query:    4 LLCTLAFAAFPFLGGVDVLEVIFHSPADLVSIRRVDEAVVIGAALSLSSSAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQ-GGTDTALSEQLLLVALTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVALCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGLLLGLFFTTTGATVDPTLLVEQWPTVTGLLLGLVTFKSIIISSASLG-FGLSAPEAAKTG 774
            LLCT+AF  FPF+ GVD+LEV+F SP DLV I R DEA++IG+ALSLSSSAFVLK+LQEKG +  R G A LGILLLQD+AVVP+LVL+PIIE Q  GT   LS   L  A + A  +G L  +L  G  +LR +FD++A  RS++ FVA+ LLV LGMG++T  +G+S TLGAFAAG LLA+TNY+ QVEA+I PFRGLLLGLFF TTGA+VDPT++  Q PT   LL GL+ FK+ IIS      F L   EA + G
Sbjct:  163 LLCTIAFGLFPFMRGVDLLEVVFRSPPDLVGITRPDEALIIGSALSLSSSAFVLKVLQEKGLQNTRTGAASLGILLLQDLAVVPILVLIPIIEAQLSGTGNVLSTAEL--AQSAAASLGALTLVLGGGSLILRRVFDMIASTRSTDAFVAMSLLVGLGMGKVTSMLGMSDTLGAFAAGALLADTNYKAQVEADIQPFRGLLLGLFFMTTGASVDPTVVAAQVPTFLALLGGLIVFKASIISLTGYRHFDLRKEEAIRVG 419          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10959.835.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
RCK1.300e-15498.84N-terminal domain-containing protein n=1 Tax=Ectoc... [more]
Na_H_Exchanger1.350e-15498.84domain-containing protein n=1 Tax=Ectocarpus silic... [more]
K(+)2.570e-9868.99efflux antiporter 3 n=1 Tax=Tribonema minus TaxID=... [more]
Sodium/hydrogen2.680e-9366.41exchanger family-domain-containing protein n=1 Tax... [more]
Hypothetical8.020e-8360.38protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Hypothetical1.520e-8159.30protein n=1 Tax=Hemiselmis andersenii TaxID=464988... [more]
K(+)2.470e-8059.54efflux antiporter 3, chloroplastic isoform X3 n=1 ... [more]
K(+)3.680e-7959.54efflux antiporter 3, chloroplastic isoform X1 n=2 ... [more]
RCK5.450e-7957.63N-terminal domain-containing protein n=1 Tax=Vanil... [more]
Hypothetical7.100e-7959.46protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10959contigEcto-sp9_F_contig10959:583..4144 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score462.6
Seed ortholog evalue1.2e-127
Seed eggNOG ortholog2880.D8LEI4
EggNOG free text desc.solute:proton antiporter activity
EggNOG OGsCOG0475@1,KOG1650@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons5
Model size776
Cds size774
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10959.835.1prot_Ecto-sp9_F_contig10959.835.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10959 584..4144 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928328.0129383-CDS-Ecto-sp9_F_contig10959:583..7281622928328.0129383-CDS-Ecto-sp9_F_contig10959:583..728Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10959 584..728 -
1692277834.4326458-CDS-Ecto-sp9_F_contig10959:583..7281692277834.4326458-CDS-Ecto-sp9_F_contig10959:583..728Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10959 584..728 -
1622928328.0310857-CDS-Ecto-sp9_F_contig10959:1569..17771622928328.0310857-CDS-Ecto-sp9_F_contig10959:1569..1777Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10959 1570..1777 -
1692277834.4451735-CDS-Ecto-sp9_F_contig10959:1569..17771692277834.4451735-CDS-Ecto-sp9_F_contig10959:1569..1777Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10959 1570..1777 -
1622928328.0445662-CDS-Ecto-sp9_F_contig10959:2164..24081622928328.0445662-CDS-Ecto-sp9_F_contig10959:2164..2408Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10959 2165..2408 -
1692277834.4561396-CDS-Ecto-sp9_F_contig10959:2164..24081692277834.4561396-CDS-Ecto-sp9_F_contig10959:2164..2408Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10959 2165..2408 -
1622928328.0614116-CDS-Ecto-sp9_F_contig10959:3056..31701622928328.0614116-CDS-Ecto-sp9_F_contig10959:3056..3170Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10959 3057..3170 -
1692277834.4700937-CDS-Ecto-sp9_F_contig10959:3056..31701692277834.4700937-CDS-Ecto-sp9_F_contig10959:3056..3170Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10959 3057..3170 -
1622928328.0761497-CDS-Ecto-sp9_F_contig10959:4081..41441622928328.0761497-CDS-Ecto-sp9_F_contig10959:4081..4144Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10959 4082..4144 -
1692277834.479721-CDS-Ecto-sp9_F_contig10959:4081..41441692277834.479721-CDS-Ecto-sp9_F_contig10959:4081..4144Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10959 4082..4144 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10959.835.1

>prot_Ecto-sp9_F_contig10959.835.1 ID=prot_Ecto-sp9_F_contig10959.835.1|Name=mRNA_Ecto-sp9_F_contig10959.835.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=258bp
VLLCTLAFAAFPFLGGVDVLEVIFHSPADLVSIRRVDEAVVIGAALSLSS
SAFVLKILQEKGQKAARFGRAVLGILLLQDIAVVPLLVLLPIIETQGGTD
TALSEQLLLVALTVAKGVGGLGGILVAGRFLLRPLFDVVAGARSSETFVA
LCLLVALGMGQLTEAIGLSTTLGAFAAGTLLAETNYRTQVEANIAPFRGL
LLGLFFTTTGATVDPTLLVEQWPTVTGLLLGLVTFKSIIISSASLGFGLS
APEAAKTG
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mRNA from alignment at Ecto-sp9_F_contig10959:583..4144-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10959.835.1 ID=mRNA_Ecto-sp9_F_contig10959.835.1|Name=mRNA_Ecto-sp9_F_contig10959.835.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3562bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10959:583..4144- (Ectocarpus species9 EcSCA_722f female)
GTTTTGCTGTGCACGCTGGCTTTCGCCGCATTTCCGTTTCTGGGAGGAGT CGACGTACTAGAGGTGAGCCAAGCCAGGTTGAGGTTGGAAGAGACGGTAA GTAGGAGCGAGCTCCGTGGTTGCAAATATTGTAATCAAGGGGGAGATGGG GTTCGGTTACCGTTTGAATATCCAGAGATGGGGGAGGTTCGAGGTGTTGT TTTTGCTACCCGAGATTATCTAGAGGGGGGGGGGGGTGGGGCTCAAGTGT TTTTTTTTGCATGACCCCTCTCGGGCCGGGCTTGCGCCATGAGTCTCATA ACACTAGGAAAGCCAAAGGGTAGTTGATAGTGGCGGTGGGCAACGATGCT GAATGGGCTGCCGTACTGTACGGTATAGAAGGTCCGCCAAGTGCTAGTGC TGCAATGGGTTCCTCGCGGTCAGTGTGTCTGCTATGCTGTGGTAGAGATG AACCAGCGGTTGACTGGAGACTTCCTTTGCTGTGTTCGCATCGGTGCTCG GCACGGCAAGGGGCCGACGTTTGACGGTTACTCACAGTCTGGTGTTGTTG CTGACGTGCGCACCAAGTGAGTCCCCTGGCCGACCAATTGTATGTTGGCT TTCTTGCCAAAGGGTTCTGACTGTTCGGTAGATGTGCGTGGTAGGCTGTA TGTGGCACGAAGGTGTAGGTACAACGATTCGACGCCCTCGTGCAGCTGTT GTGGACATACATACACACCCACCGCGTTTACTTATTTTTTATAACATGCA CGCTATCTGTCGTTGATTTATATTGGCTTTTGCGGACCCTTGGGGTCCAC TTTATTCGAGCATGTGTTTTTTAGGTTTTATTAGCCTGTGACCACGGGAA TCGACCGTGTCAAGCGCTAGACTAGTACGGACAGAAGGTACAGGCTAGAG AGATCGGAACGGTTATTAATGTGAAGACAACAACGACAACTTGTCGCTCC CGCCCGCCCCGCCGATCGCGGCAGGTGATCTTCCACTCTCCCGCGGATCT GGTGAGCATCCGTCGAGTGGACGAGGCCGTGGTGATTGGGGCGGCTCTGT CCCTCTCGAGCTCGGCGTTCGTGCTAAAGATCTTACAGGTCAGTGAGAAA GAAAAAGAAAGAACTTGTTGCCGCGAGGGTTTGCTGCAAACCAGCCTGGC GAAAGCGAAAACAAATCCGAACGAAATTTAGCAACTGGCGGTCGTTCCTC CGCGTTTGTGCGCCCGCGCACAGGCCCGGTTCTCCCCTTTCTGGGCGTCG AAACAAACCACCCCCCCCCCCCCCCCCCGCCGCCGCCGCCGCCCATAGTG TTGGCGTGGGTGGGAGTAACTGCTGCATCATCGCGTAGCGCGCGCCACAC CCATCAGATATCACGCCGCGTATTTGCCGTAAACACACATAAATTTGCGT GCGCATATCCAATCTACGCACGCGGGACCCATCATGAAACCCAAAACCGT ATGCATATGCCCTTCAGTCAAAGAAACGGACAGGGAACAGCGTGTGCGCT TAATTAAGAACACATCAAGTAGCCAACCTAAACAAACCCCCATCAGTCCG TCGCAACTATTTTATTGCTATACAGTAGGAAGCAAAAAAGATAAACTTGT GAGTGTATTTTGAGTGGGAGCTCTCCATCTCTGCGGGAAAAGGGGGGTAT CGTTTAAAAAATGTGCCATCTAGCATGAAAAAAACGAATCGTGAATGTTA TTTTGCGCGGGAACTCTCTTCTGTCTGCTGTAACAGGAAAAGGGGCAGAA GGCGGCGCGGTTCGGGCGGGCGGTCCTCGGCATCCTTCTCCTGCAGGACA TCGCGGTCGTGCCGCTGCTCGTGCTCCTCCCCATCATCGAGACGCAGGGG GGCACCGATACGGCGCTTTCGGAGCAGCTGCTGCTGGTTGCCCTGACGGT GGCCAAGGGGGTTGGCGGCCTGGGCGGCATCCTGGTGGCCGGGCGGTTCC TCCTCCGGCCCTTGTTTGACGTGGTGGCGGGTGAGAGAGGAGGTGGGGGG GGGGGGGGGGACTCTTAATGTTTTTTATGCCTTACGGGTTAGACACCCAC CCCCCCGCCCTCGANNNNNNNNNNGGGGGGGGGCGGGCTGGGGGGGGGGG GGGCTGGTCCTCCTGGGGTTGTTGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGTACTCTTAATGTTTTGCATGCCTTAGCGGTT AGACCACTCACCACGCGTCCTCGAGAGGACGGAGCACGATGTAAACGCAT GCGGTTGTCGTTAGACGATTGGCCTCGCTCTGTCCACACGCGAACTCAAC TCAATAAAACCAAGTTTGACCGACGACATTTGGACTGACATTGACCACAA CGCGATTTGGGAGGCAGGCGCCAGGAGCTCAGAAACTTTCGTCGCTCTCT GTCTCCTTGTGGCGCTCGGGATGGGCCAGCTGACGGAGGCGATCGGTCTC AGCACCACCCTGGGGGCCTTCGCCGCAGGCACCCTGCTCGCGGAAACCAA CTACCGCACCCAGGTGGAGGCCAACATCGCTCCCTTCCGGGGGCTGCTGC TGGGGCTATTCTTCACCACCACAGGGTGAGCCTTAGTACCGTAGGTGACG CAAGATATCACACCCCCTGGACCTATCTCAAAGCTCGATTGCTCCACAAC AATATTTTTTTTGGTCGCGGTGCCAATAATGGCGGCGGTTTGAACAGTCT AGCCGAGAGCTTTCCGAACACATGCCGCTTGATTTGTACATCCTCTTCGT CGTGGAGTGTTCGAGCTTTCGAAATCGGTCCAGGGGGTGTGATATCTTAC GTCACCTACGGTAGCCAGCTGAAGGGTTTGGTGACGGGTAGTCAGTGGGA ATGATGGGGCTGGGGGTCGTGCTAGGCTGGGTTGGAGTGAAGGGTTAGAT TGGATTGTGGCTTGTGCAGTCGAAGTCGACGGGCGGGGGGGGGGGGGGGG CGAGACGAGGCTACATTACTTGGAGTTTTACAACGAACTTGTGGTTTTGC CTTGTGGCGAGTCGGTCACTCGACCGTCCTTGACCAGCGCGGTCTTGGGC AGGCGTGTTTGTGTGCACATGTCGGGGTTCGATATTGATAAATTTAGTGT CCCCCCGTTTGTGGCGCCTCTTTTGTCTACTGCAAACCCCACTTGGGAGG TTGATACCGAGACCAGAAAAAACAGTGTCCAAAAAACAAACACACACACA CATTTAGCCGCCAACGGACGTGCTTTTGGAGTTTGCATGTTTCGCTGTGT CTTGTTTAAATCTGCCGCGATCCCCCATTGACCTGTGGGAACAATCCTCC GTCCTCTCCATGACGCGTGGTCTAACAGCTGAGGCATGCCAAACATGAGT ACGCCCCCCCTGCCCCCAACTCGCATATGCCCTAACCCAAAAAAACTGTC GTCCCTTCGCTTCCAGCGCGACGGTGGACCCGACGCTGTTGGTCGAGCAG TGGCCGACGGTGACTGGACTGTTGTTGGGTCTGGTGACCTTCAAGAGCAT CATCATTTCTTCCGCCAGCCTCGGGTTCGGCCTGTCCGCGCCGGAGGCGG CGAAGACGGGGC
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10959:583..4144-

>mRNA_Ecto-sp9_F_contig10959.835.1 ID=mRNA_Ecto-sp9_F_contig10959.835.1|Name=mRNA_Ecto-sp9_F_contig10959.835.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1548bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10959:583..4144- (Ectocarpus species9 EcSCA_722f female)
GTTTTGCTGTGCACGCTGGCTTTCGCCGCATTTCCGTTTCTGGGAGGAGT
CGACGTACTAGAGGTTTTGCTGTGCACGCTGGCTTTCGCCGCATTTCCGT
TTCTGGGAGGAGTCGACGTACTAGAGGTGATCTTCCACTCTCCCGCGGAT
CTGGTGAGCATCCGTCGAGTGGACGAGGCCGTGGTGATTGGGGCGGCTCT
GTCCCTCTCGAGCTCGGCGTTCGTGCTAAAGATCTTACAGGTGATCTTCC
ACTCTCCCGCGGATCTGGTGAGCATCCGTCGAGTGGACGAGGCCGTGGTG
ATTGGGGCGGCTCTGTCCCTCTCGAGCTCGGCGTTCGTGCTAAAGATCTT
ACAGGAAAAGGGGCAGAAGGCGGCGCGGTTCGGGCGGGCGGTCCTCGGCA
TCCTTCTCCTGCAGGACATCGCGGTCGTGCCGCTGCTCGTGCTCCTCCCC
ATCATCGAGACGCAGGGGGGCACCGATACGGCGCTTTCGGAGCAGCTGCT
GCTGGTTGCCCTGACGGTGGCCAAGGGGGTTGGCGGCCTGGGCGGCATCC
TGGTGGCCGGGCGGTTCCTCCTCCGGCCCTTGTTTGACGTGGTGGCGGGA
AAAGGGGCAGAAGGCGGCGCGGTTCGGGCGGGCGGTCCTCGGCATCCTTC
TCCTGCAGGACATCGCGGTCGTGCCGCTGCTCGTGCTCCTCCCCATCATC
GAGACGCAGGGGGGCACCGATACGGCGCTTTCGGAGCAGCTGCTGCTGGT
TGCCCTGACGGTGGCCAAGGGGGTTGGCGGCCTGGGCGGCATCCTGGTGG
CCGGGCGGTTCCTCCTCCGGCCCTTGTTTGACGTGGTGGCGGGCGCCAGG
AGCTCAGAAACTTTCGTCGCTCTCTGTCTCCTTGTGGCGCTCGGGATGGG
CCAGCTGACGGAGGCGATCGGTCTCAGCACCACCCTGGGGGCCTTCGCCG
CAGGCACCCTGCTCGCGGAAACCAACTACCGCACCCAGGTGGAGGCCAAC
ATCGCTCCCTTCCGGGGGCTGCTGCTGGGGCTATTCTTCACCACCACAGG
GCGCCAGGAGCTCAGAAACTTTCGTCGCTCTCTGTCTCCTTGTGGCGCTC
GGGATGGGCCAGCTGACGGAGGCGATCGGTCTCAGCACCACCCTGGGGGC
CTTCGCCGCAGGCACCCTGCTCGCGGAAACCAACTACCGCACCCAGGTGG
AGGCCAACATCGCTCCCTTCCGGGGGCTGCTGCTGGGGCTATTCTTCACC
ACCACAGGCGCGACGGTGGACCCGACGCTGTTGGTCGAGCAGTGGCCGAC
GGTGACTGGACTGTTGTTGGGTCTGGTGACCTTCAAGAGCATCATCATTT
CTTCCGCCAGCCTCGGGTTCGGCCTGTCCGCGCCGGAGGCGGCGAAGACG
GGGCGCGACGGTGGACCCGACGCTGTTGGTCGAGCAGTGGCCGACGGTGA
CTGGACTGTTGTTGGGTCTGGTGACCTTCAAGAGCATCATCATTTCTTCC
GCCAGCCTCGGGTTCGGCCTGTCCGCGCCGGAGGCGGCGAAGACGGGG
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