mRNA_Ecto-sp9_F_contig1095.829.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI70_9PHAE) HSP 1 Score: 570 bits (1470), Expect = 4.770e-203 Identity = 281/300 (93.67%), Postives = 290/300 (96.67%), Query Frame = 1
Query: 1 MPAVEENGGGSKAENSPRVLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEENLTVGFLNDKVEERTDAYLKAYDVVILGDGGFDFVLELLEEVASK 900
MPAVE+NGGGSKA+NSPRVLFRDAEDFERK QRIVAGGVD LQIISDFDFTLTKFWVNGKRGDSCHAVID SGLLGEGFHKRT ELR+HYYPLEVAPDLSPEMR+EMMVEWVTKAH+AMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVP LMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHAS+S VKPYFET+EMRCRS+VLLLGDSLGDLNMAKGL AEE LTVGFLNDKVEER DAYLKAYDVVILGDG FDFVLELLE+VASK
Sbjct: 1 MPAVEKNGGGSKADNSPRVLFRDAEDFERKWQRIVAGGVDRLQIISDFDFTLTKFWVNGKRGDSCHAVIDGSGLLGEGFHKRTWELRNHYYPLEVAPDLSPEMRLEMMVEWVTKAHDAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPFLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASASAVKPYFETDEMRCRSNVLLLGDSLGDLNMAKGLRAEETLTVGFLNDKVEERADAYLKAYDVVILGDGSFDFVLELLEQVASK 300
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDF4_ECTSI) HSP 1 Score: 505 bits (1301), Expect = 7.160e-178 Identity = 247/255 (96.86%), Postives = 253/255 (99.22%), Query Frame = 1
Query: 136 SDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEENLTVGFLNDKVEERTDAYLKAYDVVILGDGGFDFVLELLEEVASK 900
+DFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDK+GVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRV+SNRMAFDEDGNMTGFVGECFHVFNKHASSS VKPYFET+EMRCRSSVLLLGDSLGDLNMAKGLSAEE LTVGFLNDK+EERTDAYLKAYDV+ILGDGGFDFVLELLEEVASK
Sbjct: 12 TDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKYGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVVSNRMAFDEDGNMTGFVGECFHVFNKHASSSAVKPYFETDEMRCRSSVLLLGDSLGDLNMAKGLSAEEILTVGFLNDKIEERTDAYLKAYDVIILGDGGFDFVLELLEEVASK 266
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP4_9STRA) HSP 1 Score: 257 bits (657), Expect = 3.270e-80 Identity = 127/248 (51.21%), Postives = 170/248 (68.55%), Query Frame = 1
Query: 154 LTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDE-DGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEENLTVGFLNDKVEERTDAYLKAYDVVILG-DGGFDFVLELLEEV 891
L F VNG+RG SCH ++ GLL E +H+ L+ YYPLE+ L+ E RV M EWV +AH+A+ AG+TK + AV +AN+ R H EL +D +PLL+FSAG+ADVLEE RQH++ PLP+ + VISNRM+F+ +G GF G+ FHVFNK A + + +PYF + E++ R +VLLLGDSLGDL MA GL A+E L+VGFLND+ EER +YL YDVVI+G D G + L+L+ E+
Sbjct: 23 LHSFMVNGRRGSSCHGCLEYCGLLTEEYHRTVQALKQKYYPLELDTSLTQEQRVAFMEEWVEQAHDALSQAGLTKATIEQAVREANIALRGAHAELFTELDARAIPLLVFSAGLADVLEEVIRQHASAPLPAGAHVISNRMSFEPANGGFIGFTGQLFHVFNKRAGAVLDEPYFMSEEVKLRRNVLLLGDSLGDLQMASGLEADEVLSVGFLNDQAEERIGSYLAGYDVVIIGPDAGLQYALDLVREL 270
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase ((Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTG8_HETAK) HSP 1 Score: 237 bits (604), Expect = 2.180e-71 Identity = 122/268 (45.52%), Postives = 162/268 (60.45%), Query Frame = 1
Query: 55 VLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEENLTVGFLNDKVEERTDAYLKAYDVVILGDGG 858
V +D + K +R A G +QIISDFD+TLTKF +GK G S H V+ E +L E +H+ L D YYP+E P +S +V MVEW H A+V G+T+D+L +AV+ A + R G +L W + GVP+L+FSAG+ DVL E Q+ +PLPS VISN M FD G + GF FHV+NK+A + P+F + ++ R ++LL+GDS GD MA GL L +GFLN KVEER D Y YDVV+ GDGG
Sbjct: 65 VTIKDRDAVFGKLERFFADGPGKIQIISDFDYTLTKFHYDGKMGKSTHGVLAECDMLSEEYHRTARALFDRYYPVETNPSMSQAEKVPAMVEWWEADHAALVEHGLTRDVLRSAVAAAGVQLRAGCVDLFDWAEGRGVPVLLFSAGLGDVLTEVLAQNLNKPLPSHVHVISNTMEFDATGKLVGFPPPLFHVYNKNAGAVKDHPFFGES-VQARKNILLIGDSTGDARMADGLEGTTVLRIGFLNTKVEERMDTYKGLYDVVLTGDGG 331
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPE8_9STRA) HSP 1 Score: 233 bits (594), Expect = 1.940e-69 Identity = 127/318 (39.94%), Postives = 175/318 (55.03%), Query Frame = 1
Query: 55 VLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFD------------------------------------EDGNMTGFVGECFHVFNKHASSSV-VKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEENLTVGFLNDKVEERTDAYLKAYDVVILGDGGFDFVLELLEEVAS 897
V+ RD F K+ +I + G LQ++ D+DFTLT F++NG+R SCH I++ LL +H++ L+++YY EV P LS +V +M WV +AH+ ++ G + +L AV A+L R G E++ + VPLL+FSAGIADVLEE RQ PLP T V+SNRM F EDG + GF FHVFNK A S + YF + R +L+GDSLGDL+M+ GL EE + VG LND+VEER D Y + +DVV+LGDG +++ LL E+ S
Sbjct: 50 VVIRDPASFLAKKAKIASDGPSKLQLLFDWDFTLTHFFLNGRRACSCHKAIEDCDLLSAAYHEKAQALQEYYYAKEVDPSLSVAEKVPLMEAWVRRAHDLLIHHGFRRSLLPLAVKHAHLAVREGCQEVIDLSARAAVPLLVFSAGIADVLEEVCRQQLPRPLPDTVHVVSNRMVFSPVAAASPADAGAARPSVGAPQRGGRGGLEEPSQAGAEDGVLVGFTEPVFHVFNKRAESVLNTSAYFHQIDYEKRKHAILVGDSLGDLHMSDGLELEEIIKVGLLNDRVEERLDEYSQKFDVVLLGDGDLTYIIGLLRELIS 367
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=3 Tax=Takifugu TaxID=31032 RepID=H2UV53_TAKRU) HSP 1 Score: 231 bits (588), Expect = 2.450e-69 Identity = 125/286 (43.71%), Postives = 173/286 (60.49%), Query Frame = 1
Query: 43 NSPRVLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEEN-LTVGFLNDKVEERTDAYLKAYDVVILGDGGFDFVLELLEEVAS 897
+ P V RD + ++ Q +V G + LQ+ISDFD TLT+F NGKR +CH ++D S L+ + EL D YYP+E+ LS E ++ +MVEW TKAH+ ++ I KD L+ V++++ R G + KH VPLL+FSAG+ D+LEE RQ A +V SN M FDE G + F GE HV+NK + + +F+ E+R R +VLLLGDSLGDLNMA G+ +N L +GFLNDKVEER AYL +YD+V++ D + +LE S
Sbjct: 17 SKPSVFMRDPQKVQKIMQSMVKAGFNTLQVISDFDMTLTRFAYNGKRCPTCHNIMDNSKLISSEGRAKLKELLDTYYPIEIDSSLSVEEKLPLMVEWWTKAHDLLIQQAIKKDHLAVMVNESDAKLRDGFQLFFDHLHKHNVPLLIFSAGVGDILEEVIRQ--AGVFHPNVKVFSNYMDFDEAGVLRAFKGELIHVYNKREGAMLNTGHFQ--ELRARPNVLLLGDSLGDLNMADGVQDMQNILKIGFLNDKVEERKQAYLDSYDIVLVKDETMEVPNAILELAPS 298
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=2 Tax=Rivulidae TaxID=28771 RepID=A0A3Q3GWG6_KRYMA) HSP 1 Score: 229 bits (585), Expect = 3.620e-69 Identity = 122/271 (45.02%), Postives = 167/271 (61.62%), Query Frame = 1
Query: 43 NSPRVLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEEN-LTVGFLNDKVEERTDAYLKAYDVVILGD 852
++P V +D + Q I G LQ+ISDFD TLT+F NGKR +CH ++D S + G ++ EL YYP+E+ S E ++ +MVEW TKAH+ +V I KD L+ AV ++ + R G+ + KHGVPLL+FSAGI DVLEE RQ + S ++ SN M FDE G + GF GE H++NK + + +F+ E+R R +VLLLGDSLGDLNMA G+ +N L +GFLNDKVEER YL +YD+V++ D
Sbjct: 6 SNPSVCMKDPQRVREILQAISEAGSSTLQVISDFDMTLTRFSYNGKRCPTCHNILDNSKAISSGCKQKLDELLKTYYPIEIDTSRSVEEKLPLMVEWWTKAHDLLVEQKIRKDDLAEAVRESEAMLREGYELFFDHLHKHGVPLLIFSAGIGDVLEEVIRQ--VQVFHSNVKIFSNYMDFDESGVLRGFKGELIHIYNKREGALLNTGHFQ--ELRTRPNVLLLGDSLGDLNMADGVQDMQNILKIGFLNDKVEERKQTYLDSYDIVLIKD 272
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZW9_9STRA) HSP 1 Score: 231 bits (589), Expect = 4.390e-69 Identity = 126/290 (43.45%), Postives = 180/290 (62.07%), Query Frame = 1
Query: 52 RVLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGE----LLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDE--DGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEEN--LTVGFLNDKVEERTDAYLKAYDVVILGDGGFDFVLELLEEVAS 897
RV+F + + FE K ++ G L ++SDFDFT+TKF++NG RG SCH +I++ GL+ +H L+ YYPLEV P L+ E + + M+EWV KAHE + G+T+ +++ AV A + G E L VP L+FSAGIADVLEE R+ A S VISNR F+E +G +TGF HVFNK +++ + +F T +++ R+++LLLGDSLGD+ M++G+ ++ + VGFLND+VE R D YL+ YDVVIL D GFD LL+E+
Sbjct: 50 RVVFANKQAFEEKLKQFKLDGPSKLSVVSDFDFTITKFYMNGVRGASCHKIIEDCGLMAAEYHDEAQGLQAKYYPLEVDPTLNMEEKTKFMIEWVEKAHELLELHGLTRSVVTRAVHSALATGKVGLREKADTFLSLASSSKVPSLIFSAGIADVLEEILREQMAVDW-SQVHVISNRCIFEESGEGKVTGFEQPLLHVFNKKSTAYLHTNFFNTEDIKDRTNLLLLGDSLGDITMSEGMEINDDRIIKVGFLNDRVE-RMDQYLEKYDVVILDDPGFDIPYYLLQEICE 337
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=1 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672G8M8_SALFA) HSP 1 Score: 229 bits (583), Expect = 7.210e-69 Identity = 123/271 (45.39%), Postives = 169/271 (62.36%), Query Frame = 1
Query: 43 NSPRVLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEEN-LTVGFLNDKVEERTDAYLKAYDVVILGD 852
++P V +D + + Q +V G + LQ+ISDFD TLT+F NGKR +CH ++D S L+ ++ L D YYP+E+ S E ++ +MVEW TKAHE +V I KD LS AV +++ + R G+ + +H +PLL+FSAGI D+LEE RQ A V SN M FDE G +T F GE H++NK + + +F+ E+R R +VLL+GDSLGDLNMA G+ EN L VGFLNDKVEER +YL AYD+V++ D
Sbjct: 6 SNPSVCMKDPDRVQEVLQSMVKAGSNTLQVISDFDMTLTRFEFNGKRCPTCHNILDNSILISADCKQKLKGLLDTYYPIEIDSSRSVEEKLPLMVEWWTKAHELLVEQKIRKDRLSVAVRESDAMLREGYQLFFDHLHQHSIPLLIFSAGIGDILEEVIRQ--AGVFHPNVNVFSNYMDFDESGVLTAFKGELIHIYNKREGALLNTGHFQ--ELRTRPNVLLMGDSLGDLNMADGVQDMENILKVGFLNDKVEERKQSYLDAYDIVLIKD 272
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Match: 5'-nucleotidase (n=2 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7IX16_9TELE) HSP 1 Score: 229 bits (584), Expect = 7.390e-69 Identity = 120/271 (44.28%), Postives = 171/271 (63.10%), Query Frame = 1
Query: 43 NSPRVLFRDAEDFERKRQRIVAGGVDHLQIISDFDFTLTKFWVNGKRGDSCHAVIDESGLLGEGFHKRTSELRDHYYPLEVAPDLSPEMRVEMMVEWVTKAHEAMVAAGITKDILSAAVSKANLLFRPGHGELLRWVDKHGVPLLMFSAGIADVLEEAFRQHSAEPLPSTSRVISNRMAFDEDGNMTGFVGECFHVFNKHASSSVVKPYFETNEMRCRSSVLLLGDSLGDLNMAKGLSAEEN-LTVGFLNDKVEERTDAYLKAYDVVILGD 852
++P VL RD + + + +V G + LQ+ISDFD TLT+F NGKR +CH+++D S L+ E ++ + L + YYP+E+ + E ++ +MVEW TKAHE +VA I KD+LS AV ++ + R G+ + KH +PLL+FSAGI D+LEE H A +V SN M FDE G + F GE HV+NK + + +F+ E+R R +VLL+GDS+GDL MA G+ EN L +GFLNDKVEER YL +YD+V++ D
Sbjct: 6 SNPSVLMRDPQRVQEILESMVKAGSNTLQVISDFDMTLTRFAHNGKRCPTCHSILDNSKLISEDCKEKLAGLLNTYYPIEIDSSRTVEEKLPLMVEWWTKAHELLVAQKIRKDLLSVAVRESGAMLREGYQLFFDHLHKHSIPLLIFSAGIGDILEEVI--HQAGVFHPNVKVFSNYMDFDESGVLKAFKGELIHVYNKREGALLNPGHFQ--ELRTRRNVLLMGDSIGDLTMADGVQDMENILKIGFLNDKVEERKQPYLNSYDIVLIKD 272 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1095.829.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1095.829.1 >prot_Ecto-sp9_F_contig1095.829.1 ID=prot_Ecto-sp9_F_contig1095.829.1|Name=mRNA_Ecto-sp9_F_contig1095.829.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=301bp MPAVEENGGGSKAENSPRVLFRDAEDFERKRQRIVAGGVDHLQIISDFDFback to top mRNA from alignment at Ecto-sp9_F_contig1095:8196..16679- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1095.829.1 ID=mRNA_Ecto-sp9_F_contig1095.829.1|Name=mRNA_Ecto-sp9_F_contig1095.829.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=8484bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1095:8196..16679- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1095:8196..16679- >mRNA_Ecto-sp9_F_contig1095.829.1 ID=mRNA_Ecto-sp9_F_contig1095.829.1|Name=mRNA_Ecto-sp9_F_contig1095.829.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1806bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1095:8196..16679- (Ectocarpus species9 EcSCA_722f female)back to top |