mRNA_Ecto-sp9_F_contig1095.828.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1095.828.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF3_ECTSI) HSP 1 Score: 503 bits (1295), Expect = 2.840e-168 Identity = 240/243 (98.77%), Postives = 243/243 (100.00%), Query Frame = 2
Query: 140 MGGYEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILITPIIISALGRIGGLERWDKDNEGKDFEFSAVRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPPKEDLHGIYASSRIVIIAWCILFTSFIISEDDGFDYRGALLAWVLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFLGCKEW 868
MGGYEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILITPIIISALGRIGGLERWDKDNEGKDFEFSA+RSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPPKEDLHGIY+SSRIVIIAWCILFTSFIISEDDGFDYRGALLAW+LSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFLGCKEW
Sbjct: 1 MGGYEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILITPIIISALGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPPKEDLHGIYSSSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFLGCKEW 243
BLAST of mRNA_Ecto-sp9_F_contig1095.828.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF2_ECTSI) HSP 1 Score: 182 bits (463), Expect = 4.690e-48 Identity = 102/231 (44.16%), Postives = 141/231 (61.04%), Query Frame = 2
Query: 143 GGYEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILITPIIISALGRIGGLERWDKDNEGKDFEFSAVRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSG-GVKVEPPKEDLHGIYASSRIVIIAWCILFTSFIISEDDGFDYRGALLAWVLSLIAVFPHPVSYIWLGVNTGIFLQGIG 832
G Y Q RA WA +Y L W+L RL C+ GLP C+L PL+VLT L+VL FSLAQA++CEI+ + RF +L + +++ + +S L R L R E +D + + IF+ LI V+++ HFA AW LPG L+SG GV +EDL IY +SR++I+A+ IL+ +F ++ DDG+ Y+ LLAWVLSL A F +S WL V TG+FLQGIG
Sbjct: 33 GAYVEQATRATGWAVMYILGWLLMRLSCYAGLPGDCNLPDEPLEVLTVLLVLLVFSLAQAWFCEIMEERRFRDLASKVYFPLLMVGAALALSGLSRAESL-RNSLQEERRDL--TTFQVAIFIILLILTVVVLLLHFAEAWKVLPGAHLISGVGVPRVEVREDLLSIYVASRMLILAYFILYAAFSVARDDGWGYQLYLLAWVLSLFAQFKSFISVFWLAVTTGVFLQGIG 260
BLAST of mRNA_Ecto-sp9_F_contig1095.828.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P1_ECTSI) HSP 1 Score: 181 bits (460), Expect = 3.880e-47 Identity = 98/239 (41.00%), Postives = 138/239 (57.74%), Query Frame = 2
Query: 149 YEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILITPIIISALGRIGGLERWDKD---NEGKDFEFSAVRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPP-KEDLHGIYASSRIVIIAWCILFTSFIISEDDGFDYRGALLAWVLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFL 853
Y Q KRA W L L W+ QRL CH LP HCDL L+VLTDL+ L F L QA++CE+L + RF L + + VI++ +I+SA+ W +D N+ D+ S + + + + + VA+HFA AW TLPG +SG + ++ +E+LH IY SR +I+++ +L+ +F E DG LLAWVLSL A F S IWL + TG+F+QG G+ RLRFL
Sbjct: 32 YIEQAKRAAAWIGLLLLCWLFQRLMCHFNLPPHCDLPSDALEVLTDLLALLVFGLTQAWFCEVLEERRFRHLTREAYFGIVIIVIGLIVSAIETTD----WFQDMRFNDNSDWRDSHIVMAVVLITFVLVI--VAYHFAEAWRTLPGAYYVSGNINLDIVIEENLHRIYNVSRGLIVSYALLYGAFAFEEGDGLKQHYVLLAWVLSLTAQFKSKPSIIWLALCTGVFIQGFGSYRLRFL 264
BLAST of mRNA_Ecto-sp9_F_contig1095.828.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JIF9_9PHAE) HSP 1 Score: 143 bits (361), Expect = 1.050e-34 Identity = 87/243 (35.80%), Postives = 132/243 (54.32%), Query Frame = 2
Query: 158 QNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQA---YWCEILLDDRFEELKKAPWIFGVILITPIIISALGRIGGLERWDKDNEGKDFEFSAVRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPPKEDLHGI--------YASSRIVIIAWCILFTSFIISEDDGFDYRGALLAWVLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFL 853
+ +A +W + Y L W+L ++ C L P + A +PLDVLT+L L F+L QA + C+ L +RF L K ++ V++ + I SAL + G + +G + V ST+ V IA L +HF AW TLPG ++SGGV P++ + Y ++ +++ A+ L +F+ D ++Y LLAWV+SLIA+F P S +WLGV TG FLQG+GA +FL
Sbjct: 9 RGAKAAVWFSFYVLCWLLMQVSCELEPPGNYRWACQPLDVLTELPFLLAFALGQATTAFLCDTLDSERFHSLSKERYLPVVVVGSGITTSALTKNDGFVDTHEIEDGMTTAVNVV-STLLV---IAVGLAFVYHFFVAWTTLPGAVMISGGVST--PEDATAPVRSGNRFARYMATAVLVAAFVALNAAFVHRRGDNWNYHYTLLAWVMSLIAIFDDPFSVVWLGVTTGAFLQGVGAYSFQFL 245
BLAST of mRNA_Ecto-sp9_F_contig1095.828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR1_9PHAE) HSP 1 Score: 133 bits (335), Expect = 6.900e-31 Identity = 84/239 (35.15%), Postives = 124/239 (51.88%), Query Frame = 2
Query: 158 QNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILITPIIISALGRIGGLERWDKDNEGKDFEFSAVRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQL----LSGGVKVEPPK---EDLHGIYASSRIVIIAWCILFTSFIISEDDGFDYRGALLAWVLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFL 853
Q +A W Y + L C +G+P++C A +DVLT+L LF F+ A+ C IL R+ L K + +++ + + SAL G E + G D S + + + LI L+ A+H+ AW LPG L +SG V PP E+ + Y +S VI+ + +LF++F S D +DY LLAW++SLIA F +S WLG+ TG+FLQG+GA R L
Sbjct: 43 QGVKAASWVGFYIFLYALMAASCEVGVPENCTRATDAMDVLTELPFLFVFA---AFMCGILNGTRYHALSKKMYFPVLVIASGLATSALMNNDGFE--GLHDPGGDL--SPAEAALSIILLILVALVFAYHYFLAWKFLPGGWLGWGMVSGQVAEPPPPSRAENRYLQYMASITVIMLYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFRVL 274
BLAST of mRNA_Ecto-sp9_F_contig1095.828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1N8_ECTSI) HSP 1 Score: 95.1 bits (235), Expect = 5.470e-19 Identity = 52/132 (39.39%), Postives = 75/132 (56.82%), Query Frame = 2
Query: 479 EFSAVRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQL----LSGGVKVEPPK---EDLHGIYASSRIVIIAWCILFTSFIISEDDGFDYRGALLAWVLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFL 853
E S + + + L+ L+ A+H+ AW LPG L +SG V PP E+ + Y +S VI+ + +LF++F S D +DY LLAW++SLIA F +S WLG+ TG+FLQG+GA R L
Sbjct: 15 ELSPAEAALSIILLVLVALVFAYHYFLAWKFLPGGWLGWGMVSGQVAEPPPPSRAENRYLQYMASITVIMVYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFRVL 146
BLAST of mRNA_Ecto-sp9_F_contig1095.828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5L8A4_PERM5) HSP 1 Score: 62.0 bits (149), Expect = 2.420e-6 Identity = 55/203 (27.09%), Postives = 87/203 (42.86%), Query Frame = 2
Query: 284 DLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGV--------ILITPIIISALGRIGGLERWDKDNEGKDFEFSAVRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPPKEDLHGIYASSRIVIIAWCILFTSFII--------SEDDG---FDYRGALLAWVLSLIAVFPHPVSYIWLGVNTGIFLQGIGA 835
+L L F + QA++ E++ DD K++ WIF + + + LG + L G ++A S + F LL+ WH + +KV P D +Y SR+ ++ CI +F++ DD F +AW+LSLIA F HP+S + L + +GIF+QGI A
Sbjct: 130 NLANLAMFGIIQAWFVEVI-DDP----KRSKWIFSLRRWWFFITFFAASTVFTLLGMLDVLSHSSISPSGHLDNWNAF-SIVLTFLASFLALLIIWHVVYS-------------IKVLPTYADA-AVYIISRVGVV--CIFGITFLLIHYDDKYNKHDDNPVTFHLHHYFIAWLLSLIAAFDHPISLLMLSITSGIFVQGIAA 310
BLAST of mRNA_Ecto-sp9_F_contig1095.828.1 vs.
Match: Uncharacterized (protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NSF0_PEROL) HSP 1 Score: 62.4 bits (150), Expect = 4.360e-6 Identity = 68/269 (25.28%), Postives = 105/269 (39.03%), Query Frame = 2
Query: 83 PVEEEPKSPAPKESKSYCTMGGY----EGQNKRALIWAALYFLAWILQRLWCH-LGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDD-RFEELKKAP--WIFGVILITPIIISALGRIGGLERWDKDNEGKDFEFSAVRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPPKEDLHGIYASSRIVIIAWCILFTSFII-------SEDDG---FDYRGALLAWVLSLIAVFPHPVSYIWLGVNTGIFLQGIGA 835
P+ + K +E SY +G + L W L + R +C +P D L T+L L F + QA++ E++ D R + + P W F + + LG + L G ++A ST+ WH W + +KV P D +Y SR ++ C +F++ + DD F +AW+LSLIA F HP+S I L + +GIF+QGI A
Sbjct: 393 PLSADSKWKRRREVSSYSAIGPLVTPSSSSDDGVLRWLLLLVAGYAYNRFFCEKYNIPRDSD-RYTYLGHSTNLANLAMFGIIQAWFVEVIDDPKRSKWIFSFPRWWFFITFFAASTVFTLLGMLDALSHNSISPSGHLDRWNAF-STVLTXXXXXXXXXXXWH---VWYS----------IKVLPTYPDA-AVYILSRFGVV--CTFGVTFLLIHFDDEHNHDDNPVTFHLHHYFIAWLLSLIAAFDHPISLIMLAITSGIFVQGIAA 643 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1095.828.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1095.828.1 >prot_Ecto-sp9_F_contig1095.828.1 ID=prot_Ecto-sp9_F_contig1095.828.1|Name=mRNA_Ecto-sp9_F_contig1095.828.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=244bp MGGYEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLback to top mRNA from alignment at Ecto-sp9_F_contig1095:60..6654- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1095.828.1 ID=mRNA_Ecto-sp9_F_contig1095.828.1|Name=mRNA_Ecto-sp9_F_contig1095.828.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=6595bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1095:60..6654- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1095:60..6654- >mRNA_Ecto-sp9_F_contig1095.828.1 ID=mRNA_Ecto-sp9_F_contig1095.828.1|Name=mRNA_Ecto-sp9_F_contig1095.828.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1464bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1095:60..6654- (Ectocarpus species9 EcSCA_722f female)back to top |