mRNA_Ecto-sp9_F_contig1093.816.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1093.816.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY69_ECTSI) HSP 1 Score: 667 bits (1722), Expect = 2.020e-240 Identity = 327/341 (95.89%), Postives = 330/341 (96.77%), Query Frame = 1
Query: 160 MHSGLRPELPLFYNDVYRVDLPNGHRFPMEKYRLVREGLQGELLGRENGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGFRRKPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVFTFSIHCQANYFSEKEDSDVDVEVEEGAGDEEYLSLLSARFPSLVDQVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALARGIPTVLTTGGGYPKDLDPTSEDFGHIVRSHRDVYEDAAACINASAF 1182
MHS LRPELPLFYNDVYRVDLP+GHRFPMEKYRLVREGLQGELLGR NGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPG RR PPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEV TFSIHC+ANYFSEKEDSDVD+EVEEGAGDEEYLSLLS R PSLVD VRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALARGIPTVLT GGGYPKDLDP SEDFGHIVRSHRDVYEDAAACIN SAF
Sbjct: 1 MHSRLRPELPLFYNDVYRVDLPDGHRFPMEKYRLVREGLQGELLGRVNGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGARRTPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVSTFSIHCKANYFSEKEDSDVDIEVEEGAGDEEYLSLLSERLPSLVDHVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALARGIPTVLTMGGGYPKDLDPASEDFGHIVRSHRDVYEDAAACINTSAF 341
BLAST of mRNA_Ecto-sp9_F_contig1093.816.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z933_9STRA) HSP 1 Score: 374 bits (961), Expect = 1.070e-124 Identity = 195/338 (57.69%), Postives = 226/338 (66.86%), Query Frame = 1
Query: 202 DVYRVDLPNGHRFPMEKYRLVREGLQGELLGRENGIPA-------------------VSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGFRRKPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVFTFSIHCQANYFSEKEDSDVDVEVEEGAGDEEYLSLLSARFPSLVDQVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALARGIPTVLTTGGGYPKDLDPTSEDFGHIVRSHRDVYEDAA 1158
DVY V LP HRFPM KYR+VRE +Q EL G +F+VSP AS DDL TTH YV R G T +E+R VGFPWSE V R+LSS+GGTVAA HAVC RD F LF+GH+AGGTHHAF DRGEGFCVFSDIAVAANVALRD+ E +R+ILI+D DVHQGNGNA LF V+TFS+HC+ANYFS ++ SD+DVEV+ AGD+ YLSL+ P L+DQVRPDL+FYQ GVDPL DRLG L LTREGL RNR+VY AL R V+T GGGYP+D+ SED+ IV +H DVY AA
Sbjct: 1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPF-----CLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAA 333
BLAST of mRNA_Ecto-sp9_F_contig1093.816.1 vs.
Match: Hypothetical (protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IVC4_9EUGL) HSP 1 Score: 372 bits (954), Expect = 9.700e-124 Identity = 187/325 (57.54%), Postives = 226/325 (69.54%), Query Frame = 1
Query: 193 FYNDVYRVDLPNGHRFPMEKYRLVREGLQGELLGRENGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGFRRKPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVFTFSIHCQANYFSEKEDSDVDVEVEEGAGDEEYLSLLSARFPSLVDQVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALARGIPTVLTTGGGYPKDLDPTSEDFGHIVRSHRDVYEDAAACI 1167
+YNDVY+V LP GHRFPMEKYR+VRE LQ L E F VSP A+ DLC HD YV RY G FT+ ENR VGFPWS SV RSLSSVGGTVAA H VC + F+ H+AGGTHHAF D GEGFC+FSDIAVAA VALRDYP+ I++ILIVD DVHQGNGNAVLFK++ VFTFS+HC+ NYFS+K+ SD+D+E+ +G D+EYL++L L D+V+PDL+F+Q GVD D+LG++ LTR GL RNR VY+TA+ R +P V+T GGGYP+D+DP S F IV H DVY A +
Sbjct: 25 YYNDVYKVPLPQGHRFPMEKYRMVRERLQCLLPQGE-----ALFEVSPLATTRDLCLVHDHTYVNRYRTGAFTDAENRKVGFPWSINSVNRSLSSVGGTVAATHMVCTG--------------KAFFAAHLAGGTHHAFRDHGEGFCIFSDIAVAATVALRDYPKIIKKILIVDLDVHQGNGNAVLFKNEDRVFTFSMHCKQNYFSQKQTSDLDIELPKGCTDQEYLAVLQMHLARLFDRVQPDLVFFQAGVDVFYQDKLGKMLLTRGGLLRRNRHVYETAIFRQVPVVITMGGGYPRDVDPASTAFREIVEVHADVYVGAVEAL 330
BLAST of mRNA_Ecto-sp9_F_contig1093.816.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B912_CHRCT) HSP 1 Score: 370 bits (951), Expect = 5.080e-123 Identity = 192/330 (58.18%), Postives = 228/330 (69.09%), Query Frame = 1
Query: 178 PELPLFYNDVYRVDLPNGHRFPMEKYRLVREGLQGELLGRENGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGFRRKPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVFTFSIHCQANYFSEKEDSDVDVEVEEGAGDEEYLSLLSARFPSLVDQVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALARGIPTVLTTGGGYPKDLDPTSEDFGHIVRSHRDVYEDAAACI 1167
P +PLFYND+Y V LP GHRFPM KYRLVR GLQ EL +F SP A++ DL T HD YVERY G FT +ENR VGFPWS SVKRSLSS GGTVAA HAVC +R PG R F+GH+AGGTHHAF+DRGEGFCVF+DIAVAA VALRDY E+++++LIVD DVHQGNG A +F P VFTFS+HC NYFS+K++SD+DVEV+ GA D EYL +L + +L +QVRP L F+Q GVDP E D G+L ++ GL+ RNRLVY A V T GGGYPKDLD S F + ++H DVY AC+
Sbjct: 34 PPVPLFYNDLYEVPLPPGHRFPMAKYRLVRLGLQRELEPSN----LATFLPSPLAAVSDLTTCHDATYVERYVTGTFTPQENRRVGFPWSIESVKRSLSSTGGTVAATHAVC------NRTPGAPR-----FAGHLAGGTHHAFADRGEGFCVFNDIAVAACVALRDYKESVQRVLIVDLDVHQGNGCAAIFADNPNVFTFSMHCAGNYFSKKQNSDIDVEVQPGATDAEYLEILHSHLGNLFEQVRPQLTFFQAGVDPHEADAFGKLKISSAGLKRRNRLVYKEAARHNSLLVATMGGGYPKDLDQESASFFQVCQAHMDVYR---ACV 345
BLAST of mRNA_Ecto-sp9_F_contig1093.816.1 vs.
Match: Uncharacterized (protein HDA n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDD4_AURAN) HSP 1 Score: 358 bits (919), Expect = 1.840e-118 Identity = 192/342 (56.14%), Postives = 227/342 (66.37%), Query Frame = 1
Query: 136 TTAAALVSMHSGLRPELPLFYNDVYRVDLPNGHRFPMEKYRLVREGLQGELLGRENGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGFRRKPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVFTFSIHCQANYFSEKEDSDVDVEVEEGAGDEEYLSLLSARFPSLVDQVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALARGIPTVLTTGGGYPKDLDPTSEDFGHIVRSHRDVYEDAAA 1161
T A V GL +YNDV+ LP HRFPM KYRLVRE LQ E G+ A +F SP ASL DL TTH +GY ER+ G+ T ENR +GFPWS A V R+LSS GGTVAA AV + R G R +GH+AGGTHHAF DRGEGFCVFSDIAVAANV LRDY + + +IL+VD DVHQGNGNA LF+ P V TFS+HC NYFSEK SDVDVEV GAGD EYL LL + + ++ D++F Q GVDP EHDRLG+L LT +GLR RN+L+ D L +G V+T GGGYPK+LDP S ++ IV +H DVY +AAA
Sbjct: 5 TCALLAVRRARGLATRPVFYYNDVWEFPLPENHRFPMAKYRLVREALQAE------GV-AAAFEPSPLASLTDLTTTHCRGYCERFVGGKLTAAENRNIGFPWSPAGVNRALSSTGGTVAAARAVA---DARRAGGGLR------VAGHVAGGTHHAFFDRGEGFCVFSDIAVAANVLLRDYGDVVEKILVVDVDVHQGNGNAKLFEGAPAVTTFSMHCDGNYFSEKRASDVDVEVPAGAGDGEYLRLLKS-YVQMLAGGGADVVFLQAGVDPSEHDRLGKLRLTADGLRRRNKLLLDAFLRKGASVVVTMGGGYPKNLDPASPEYRAIVEAHADVYREAAA 329
BLAST of mRNA_Ecto-sp9_F_contig1093.816.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U809_9STRA) HSP 1 Score: 349 bits (896), Expect = 2.630e-114 Identity = 192/358 (53.63%), Postives = 231/358 (64.53%), Query Frame = 1
Query: 136 TTAAALVSMHSGLRPELPL---------FYNDVYRVDLPNGHRFPMEKYRLVREGLQGELLGRENGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGFRRKPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVFTFSIHCQANYFSEKEDSDVDVEVEEGAGDEEYLSLLSARFPSLVDQVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALA-RGIPTVLTTGGGYPKDLDPTSEDFGHIVRSHRDVYEDAAACINASA 1179
+TA L S +G P P FYNDVY LP GHRFPMEKYRLVR LQ L+ G+ A F VSP AS +DL TTH YV+R+ G T ENR +GFPWSEA V R++SS GGTVAA AV DG R F+G +AGGTHHAF D GEGFCVFSDIAVAAN ALR++ +R++L+VD DVHQGNGNAVLF P VFT+S C+ N FS++E SDVDV V GAGD+ YL +L P++ ++VRP L+F+Q GVD L+ DRLGRL L+REGLR RN LVYD L + V+T GGGYPKDL +S F IV +H DVY A+ + S+
Sbjct: 32 STAVGLSSRPAGPEPSGPAWDPAHPALYFYNDVYEFPLPEGHRFPMEKYRLVRRKLQHTLV--PGGLAA--FDVSPLASREDLVTTHCPAYVDRFLTGELTPGENRCIGFPWSEAGVDRAVSSTGGTVAAARAVLEDGGPR-------------FAGQVAGGTHHAFYDYGEGFCVFSDIAVAANCALREHAAWLRRVLVVDLDVHQGNGNAVLFADDPAVFTYSAQCEQNLFSKREASDVDVWVPSGAGDDAYLGMLRETLPAVFERVRPQLVFFQAGVDGLDADRLGRLGLSREGLRQRNDLVYDLVLGGKDTRLVVTLGGGYPKDLSTSSRPFHDIVDAHADVYVQASQRLARSS 372
BLAST of mRNA_Ecto-sp9_F_contig1093.816.1 vs.
Match: Hist_deacetyl (domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EU19_VITBC) HSP 1 Score: 349 bits (896), Expect = 4.430e-114 Identity = 191/338 (56.51%), Postives = 225/338 (66.57%), Query Frame = 1
Query: 184 LPLFYNDVYRVDLPNGHRFPMEKYRLVREGLQGELLGRENGIPA----------VSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGFRRKPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVFTFSIHCQANYFSEKEDSDVDVEVEEGAGDEEYLSLLSARFPSLVDQVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALA---RGIPTVLTTGGGYPKDLDPTSEDFGHIVRSHRDVYEDAA 1158
L L+YND++ V LP H+FPM KYR VR LQ LLGR SFA SP AS++DL TTH YV + EG + R +GFP SV R+LSSVGGTVAA VC LR +R G P LF+GHIAGGTHHAF DRGEGFC FSDIAVAANVALRDY + I +ILIVD DVHQGNGNAVLF+ + VFT S+HC ANYFS KE S VD+EV EG GD YLSLL+ P +V + RPDLIFYQ GVD L+ DR G+LSL+R GL+ RNRLVY+ A+ +P V+T GGGYP+DL+ S + +V +H DVY AA
Sbjct: 52 LSLYYNDLFEVTLPPDHKFPMAKYREVRLRLQ-RLLGRTTNTNTDSRDQGNAVWASFAPSPLASIEDLHTTHCPSYVRAFCEGSLDPMQYRRIGFPRGHESVNRALSSVGGTVAATRDVCL--ALRRQRKGQEPTRP-LFAGHIAGGTHHAFRDRGEGFCAFSDIAVAANVALRDYADVIERILIVDLDVHQGNGNAVLFQDQSNVFTLSVHCTANYFSPKEASHVDIEVPEGTGDGAYLSLLAKTLPDIVREFRPDLIFYQSGVDCLKTDRFGKLSLSRGGLQTRNRLVYEMAMTDKHTPVPVVVTMGGGYPRDLEVESRSYQEVVSAHADVYVGAA 385
BLAST of mRNA_Ecto-sp9_F_contig1093.816.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XGD3_DIALT) HSP 1 Score: 337 bits (864), Expect = 1.990e-110 Identity = 176/334 (52.69%), Postives = 214/334 (64.07%), Query Frame = 1
Query: 178 PELPLFYNDVYRVDLPNGHRFPMEKYRLVREGLQGELLGRENGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGFRRKPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVFTFSIHCQANYFSEKEDSDVDVEVEEGAGDEEYLSLLSARFPSLVDQVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALARGIPTVLTTGGGYPKDLDPTSEDFGHIVRSHRDVYEDAAACINASA 1179
P +YNDV+RVDLP+ HRFPM KY VR LQ EL RE + F VSPTA+ D+LCTTH + YVER T E R +GFP S+ R+ SSVGGT+AA A+ G R + HIAGGTHHAF DRGEG+CVFSDIAVAAN LR+ P ++R L+VDCDVHQGNGNAVLFK + VFTFS+HC NYFS E SD+D+EV GAGD EY L A P L + P L+F+QGGVDPL +DR G+L L+R GLR RN V+ G+P V+T GGGYP+D+ S D ++++H DVY AA N +A
Sbjct: 3 PRAIFYYNDVFRVDLPDNHRFPMGKYESVRRSLQNEL--REGAV----FRVSPTATFDELCTTHARSYVERVLNDELTRDELRRIGFPGGPQSIARATSSVGGTLAAARALFEPGAPR-------------VTAHIAGGTHHAFWDRGEGYCVFSDIAVAANCILREQP-SVRSCLVVDCDVHQGNGNAVLFKDEHRVFTFSMHCAGNYFSPVEASDLDIEVPIGAGDAEYCGKLEAVLPPLFHALAPQLVFFQGGVDPLANDRYGKLQLSRAGLRRRNEAVFGLCAQHGVPLVVTMGGGYPRDMRAGSADTFQVIQAHMDVYRGAAQLQNNAA 316
BLAST of mRNA_Ecto-sp9_F_contig1093.816.1 vs.
Match: Histone (deacetylase superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGL1_9STRA) HSP 1 Score: 339 bits (870), Expect = 1.630e-109 Identity = 180/351 (51.28%), Postives = 223/351 (63.53%), Query Frame = 1
Query: 106 VAYRAAPVGLTTAAALVSMHSGLRPELPLFYNDVYRVDLPNGHRFPMEKYRLVREGLQGELLGRENGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGFRRKPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVFTFSIHCQANYFSEKEDSDVDVEVEEGAGDEEYLSLLSARFPSLVDQVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALARGIPTVLTTGGGYPKDLDPTSEDFGHIVRSHRDVYEDAA 1158
V R + V +T+ A G++ L FYND++ V +P GHRFPMEKY R Q L +P V F SP +++ DL TTHD+ Y++RY G T +E R GF W+E V R+LSSVGGTVAA HAV L+ P H+AGGTHHAF R EGFC+FSDIAVAANVALRDYP+ +R+ILIVD D HQGNGNAVLF+ VFTFS+HC ANYFSEK+ SD+DVEV+ G GD YLSLL P + + PDL+F+Q GVD DRLG+L+LTR GL+ RN ++ A G V+T GGGYP D DP+S + I+ +H DVY AA
Sbjct: 103 VTRRFSSVVVTSNTAQGGDQRGVKDPLYFFYNDIFHVKMPEGHRFPMEKYAAFRRQAQQRLFS----LPGVGFHPSPLSTVRDLETTHDRSYIQRYLVGNVTAQEKRESGFDWNEQHVNRTLSSVGGTVAATHAV-----LQSDLP---------VGAHLAGGTHHAFQARMEGFCIFSDIAVAANVALRDYPDKVRKILIVDLDTHQGNGNAVLFQDDSRVFTFSMHCDANYFSEKQASDLDVEVKPGTGDAGYLSLLERYLPLVFEAQAPDLVFFQAGVDIHASDRLGKLALTRAGLQRRNLRLFQFVEAYGSKLVVTAGGGYPSDSDPSSGPYADIINAHADVYVGAA 435
BLAST of mRNA_Ecto-sp9_F_contig1093.816.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B9B1_CHRCT) HSP 1 Score: 331 bits (848), Expect = 2.230e-107 Identity = 171/282 (60.64%), Postives = 203/282 (71.99%), Query Frame = 1
Query: 178 PELPLFYNDVYRVDLPNGHRFPMEKYRLVREGLQGELLGRENGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGFRRKPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVFTFSIHCQANYFSEKEDSDVDVEVEEGAGDEEYLSLLSARFPSLVDQVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLV 1023
P +PLFYND+Y V LP GHRFPM KYRLVR GLQ EL +F SP A++ DL T HD YVERY G FT +ENR VGFPWS SVKRSLSS GGTVAA HAVC +R PG R F+GH+AGGTHHAF+DRGEGFCVF+DIAVAA VALRDY E+++++LIVD DVHQGNG A +F P VFTFS+HC NYFS+K++SD+DVEV+ GA D EYL +L + +L +QVRP L F+Q GVDP E D G+L ++ GL+ RNRLV
Sbjct: 34 PPVPLFYNDLYEVPLPPGHRFPMAKYRLVRLGLQRELEPSN----LATFLPSPLAAVSDLTTCHDATYVERYVTGTFTPQENRRVGFPWSIESVKRSLSSTGGTVAATHAVC------NRTPGAPR-----FAGHLAGGTHHAFADRGEGFCVFNDIAVAACVALRDYKESVQRVLIVDLDVHQGNGCAAIFADNPNVFTFSMHCAGNYFSKKQNSDIDVEVQPGATDAEYLEILHSHLGNLFEQVRPQLTFFQAGVDPHEADAFGKLKISSAGLKRRNRLV 300 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1093.816.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1093.816.1 >prot_Ecto-sp9_F_contig1093.816.1 ID=prot_Ecto-sp9_F_contig1093.816.1|Name=mRNA_Ecto-sp9_F_contig1093.816.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=397bp MRPSSPAILNMISTLLPRARQQAAARSIAVPNGRLVAYRAAPVGLTTAAAback to top mRNA from alignment at Ecto-sp9_F_contig1093:18479..24511+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1093.816.1 ID=mRNA_Ecto-sp9_F_contig1093.816.1|Name=mRNA_Ecto-sp9_F_contig1093.816.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=6033bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1093:18479..24511+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1093:18479..24511+ >mRNA_Ecto-sp9_F_contig1093.816.1 ID=mRNA_Ecto-sp9_F_contig1093.816.1|Name=mRNA_Ecto-sp9_F_contig1093.816.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2382bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1093:18479..24511+ (Ectocarpus species9 EcSCA_722f female)back to top |