mRNA_Ecto-sp9_F_contig1091.795.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1091.795.1
Unique NamemRNA_Ecto-sp9_F_contig1091.795.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Hypothetical (leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL6_ECTSI)

HSP 1 Score: 1330 bits (3441), Expect = 0.000e+0
Identity = 804/909 (88.45%), Postives = 809/909 (89.00%), Query Frame = 1
Query:   25 MLFLPWPSGLVRALWAAVATAGYLCPTAFASAYTEEVQIAGLEALYYATNGQAWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMEILDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQPSSPWLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALALYYYCDGSGSSGCGGNVSSVAAPLLRVLNVGGNDLIGSPPRVVDTDNRRIDLLDVSDNGNFVGEVPASYAELLILFAENTGLSGLDLPDFIDATTTTAAGAWNEKSTVHDLFVCPAFKPSADENVAAVTLDHAYDGYSVCTCNDGLQGSGGGSECSECPLGSYRNLEEEDDPLAEGVCSPCPSNSTTLQNGSWLKSQCVCATNFYDEQGGADSEPSXXXXXXXXXXXXXXXXXXXXXECEPGRIFNTTSGACESCGAGTYKPAYGNHIGLCXXXXXXXYSDTVRATSQSDCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDNQVANEGSAECTDEFSEDGTLIGLYLLIVGIILVVFTLVGVFLQKHCGDAIPVKEKVHMKLNEEMKSFIYGQQFWISLFSGVEIMDLMSDLGAYASLLYTAALTGAMKVVYTIVVAFALVASLHGVHTRAMIILDMQEERMHGLAITGNNMLYYEKQFTILQIMSQKRTCRIHVPFDRGNKYLSHHIGVQRLISLNSMRIIIAIFEDVPFLGLNMYLLMTQPDLASNLVFMMSFVMSIFVLGYKMTLLEKHARLQIRKWNLEARMDTDTMLNKKAARGRRFSWACQQCE 2751
            MLFLPWPSGLVRALWAAVATAGYLCPTAFASAYTEEVQIAGLEALYYATNGQ WANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNME LDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQPSSPWLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALALYYY                                 SPPRVVDTDNRRIDLLDVSDNGNFVGEVPASY+ELLILFAENTGLSGLDLPDFIDATTTTAAGAWNEKSTVHDLFVCPAFKPSADENVAAVTLDHAYDGYSVCTCNDGLQGSGG SECSECPLGSYRNLE+EDDPLAEGVCSPCPSNSTT+QNGSWLKSQCVCA NFYDEQGGADSEPSXXXXXXXXXXXXXX       ECEPGRIFNTTS ACESC AGTYKPAYGNH+GLC       YSDTV ATSQ DCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DNQVANEGSAECTDEFSEDGTLIGLYLLI GIILVVFTLVGVFLQKHCGDAIPVKEKVHMKLNEEMKSFIYGQQFWISLFSGVEIMDLMSDLGAYASLLYTAALTGAMKVVYTIVVAFALVASLHGVHTRAMIILDMQE                                           YLSHHIGVQRLISLNSMRIIIAIFEDVPFLGLNMYLL+TQPDLASNLVFMMSFVMSIFVLGYKMTLLEKHARLQIRKWNLEARMDTDTMLNKKAARGRRFSWACQQCE
Sbjct:    1 MLFLPWPSGLVRALWAAVATAGYLCPTAFASAYTEEVQIAGLEALYYATNGQDWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMETLDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQPSSPWLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALALYYYW--------------------------------SPPRVVDTDNRRIDLLDVSDNGNFVGEVPASYSELLILFAENTGLSGLDLPDFIDATTTTAAGAWNEKSTVHDLFVCPAFKPSADENVAAVTLDHAYDGYSVCTCNDGLQGSGGDSECSECPLGSYRNLEKEDDPLAEGVCSPCPSNSTTMQNGSWLKSQCVCAINFYDEQGGADSEPSXXXXXXXXXXXXXXAVNIASCECEPGRIFNTTSRACESCVAGTYKPAYGNHVGLCLPCSAGTYSDTVGATSQYDCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNQVANEGSAECTDEFSEDGTLIGLYLLIAGIILVVFTLVGVFLQKHCGDAIPVKEKVHMKLNEEMKSFIYGQQFWISLFSGVEIMDLMSDLGAYASLLYTAALTGAMKVVYTIVVAFALVASLHGVHTRAMIILDMQE-------------------------------------------YLSHHIGVQRLISLNSMRIIIAIFEDVPFLGLNMYLLVTQPDLASNLVFMMSFVMSIFVLGYKMTLLEKHARLQIRKWNLEARMDTDTMLNKKAARGRRFSWACQQCE 834          
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Hypothetical (leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL7_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 4.550e-42
Identity = 139/422 (32.94%), Postives = 199/422 (47.16%), Query Frame = 1
Query:  115 SAYTEEVQIAGLEALYYATNGQAWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMEILDLSGNELSYFPAAWGSGASMLRHLSLQNNRISG--------SFPAAWLNVTDSSSYPLVHLQPSSPWLPELRSLLLGGNN-MNATGYVALQAVANWRSLQTL--DLSDNALTGSVDDALALYYYCDGS--GSSGCGGNVSSVAAPLLRVLNVGGNDLIGSPPRVVDTDNRRIDLLDVSDNGNFVGEVPASYAELLILFAENTGLSGLDL----PDFIDATTTTAAGAWNEKSTVHDLFVCPAFKPSADENVAAVTLDHAYDGYSVCTCNDGLQGSGGGSECSECPLGSYRNLEEEDDPLAEGVCSPCPSNSTTLQNG 1329
            S+Y E  Q+ GLEALY AT G+ WA+S+GW D +LGVC WYGV CDS+G NVTG++L+ N L G++SEA +L +V+SL  +DLSDN+L GPV L  G+MP++E+LDLS N+LSYFP +WG+ AS LRHLSLQ N ISG        SFP +   +T S +   +   P      +L   L  GN  +N T   +  + AN   + T   ++S   ++G       ++   D S  G S C           + +  + GN   G       T     DL              +            TG   +      P F D       G       V     CP+   ++D +V A+++       + C+C  G         C++C  G+Y+     D      +C PCP  + + Q G
Sbjct:   28 SSYLETQQV-GLEALYNATGGEQWASSSGWRDATLGVCDWYGVVCDSDGRNVTGLALAGNGLAGNLSEAVELFDVLSLISIDLSDNELVGPVALGFGLMPDLEVLDLSRNDLSYFPTSWGTEASSLRHLSLQQNEISGIEGELETHSFPRSLSALTVSDN---LLTGPVPEDCAQLSVFLADGNEGLNDTSLPSFASYANSSDVVTRHNNMSCPVISGQDTAGRGVHLSLDPSYLGYSHC-----------VCIKGMQGNAEDGCQACPEGTYRGAADLF----------ATRSXXXXXXXXXXXTTGSETVSXXKCEPGFYDTLGGVGDG-------VPSCSACPSGSVASD-SVGAISV-------AACSCPAGRYLDEPAETCTDCQAGTYKTTVGND----VSLCVPCPEGTYSPQTG 405          
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Cf-4/9 (disease resistance family protein n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836IFC6_9ROSI)

HSP 1 Score: 72.0 bits (175), Expect = 3.470e-9
Identity = 78/249 (31.33%), Postives = 114/249 (45.78%), Query Frame = 1
Query:  226 CSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLS-------------------------GPVPLNLGMMPNMEILDLSGN-ELSYFPAAWGS---GASMLRHLSLQNNRISGSFPAAWLNVTDS-SSYPLV--HLQPSSPWLPE--LRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALALYYYCDGSGSSGCGGNVSSVAAPLLRVLNVGGNDLIGS 870
            CSW GVTCDSE GNV G+ L+ ++L G +   + L ++  L ++DLS N  +                         G VP  +  + N+  LDLS N EL+  P  +       + LR L L+   +S   P+  +N++   SS  L+   LQ   P   +  LR L LG NN   TG ++  A     +LQ  DLS+N+L+G +         C GS S+             L VL++G NDL G+
Sbjct:   47 CSWDGVTCDSESGNVIGLDLACSMLYGTLHSNSTLFSLHHLRKLDLSYNDFNLSQISSRFGHFSNLTHLNLNYSAFTGLVPSQISQLSNLVSLDLSLNSELTLEPIPFNKLVQNLTKLRELHLREVDMSLVAPSFLMNLSSPLSSLQLMDCRLQGEFPIFNQESLRVLKLGSNN-KLTGEISSSA-CKLTALQVFDLSNNSLSGFIPQ-------CLGSFSNS------------LSVLHLGMNDLEGT 274          
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: receptor-like (protein 7 n=1 Tax=Ziziphus jujuba var. spinosa TaxID=714518 RepID=UPI00202486CA)

HSP 1 Score: 70.5 bits (171), Expect = 5.090e-9
Identity = 65/227 (28.63%), Postives = 95/227 (41.85%), Query Frame = 1
Query:  184 WANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQL-------------------------SGPVPLNLGMMPNMEILDLSGNELSY----FPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLV--HLQPSSP----WLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALAL 759
            W N       S   CSW GV CD E GNV G+ LS++ L G ++  + L N++ L  ++LSDN                           SG VP  +  M N+  LDLS N L        +   + ++ L  L+L +  IS   P    N T  +   L    LQ   P     LP L +L +G N+ N +GY  L        L+ L+L     +GS+  ++ +
Sbjct:   71 WNNPQQGETSSGNCCSWDGVECDEETGNVVGLDLSSSCLYGTINSTSTLFNLVHLRRLNLSDNHFNYSLIPTSIGQFSEMTHLDLSASAFSGQVPFEISNMSNLSSLDLSENYLKLKNPNMRSLVQNLSTGLEILNLNHVLISSKIPDFLANFTSLTLLGLYDCELQGEFPAKIFQLPNLENLSIGSNS-NVSGY--LPEFLRPSPLKILNLEGTRFSGSLPSSIQM 294          
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Hypothetical (protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C5B9_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 6.110e-9
Identity = 45/142 (31.69%), Postives = 73/142 (51.41%), Query Frame = 1
Query:  148 LEALYYATNGQAWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMEILDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSY 573
            L+  Y A  G+ W  ST W  +    C W+GV C  +  N   + L++N L G +++  ++ N+  LE +DLSDN + G +P  +G +  +  L L+ N        +G+    L+ L +  NR+SG+ P   L V + SSY
Sbjct:  164 LKKFYDAAKGREWTESTLWLHEYESHCLWFGVDCGKDN-NTIKLKLASNGLSGTLTK--NIANLTRLEVLDLSDNDIKGKIPTEIGSLSFLHRLRLNHNFFIGNDTNFGN-LKQLKLLQIHGNRLSGTVPMLNLTVHNRSSY 301          
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: receptor-like (protein 7 n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4BSD3_ZIZJJ)

HSP 1 Score: 71.6 bits (174), Expect = 6.890e-9
Identity = 65/227 (28.63%), Postives = 97/227 (42.73%), Query Frame = 1
Query:  184 WANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQL-------------------------SGPVPLNLGMMPNMEILDLSGNELSY----FPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLV--HLQPSSP----WLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALAL 759
            W N       S   CSW GV CD E GNV G+ LS++ L G ++  + L N++ L  ++LSDN                           SG VP+ +  M N+  LDLS N L        +   + ++ L  L+L +  IS   P    N T  +   L    LQ   P     LP L++L +G N+ N +GY  L        L+ L+L     +GS+  ++ +
Sbjct:   71 WNNPQQGETSSGNCCSWDGVECDEETGNVVGLDLSSSCLYGTINSTSTLYNLVHLRRLNLSDNHFNYSLIPTSMGQFSEMTHLDLSASAFSGQVPIEISNMSNLSSLDLSENYLELKNPNMRSLVQNLSTGLEILNLNHVLISSEVPDFLANFTSLTFLGLYDCELQGEFPAKIFQLPNLQNLYIGANS-NLSGY--LPEFLRASPLKILNLEGTRFSGSLPSSIQM 294          
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: receptor-like (protein 7 n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4A5W4_ZIZJJ)

HSP 1 Score: 71.2 bits (173), Expect = 7.630e-9
Identity = 65/227 (28.63%), Postives = 96/227 (42.29%), Query Frame = 1
Query:  184 WANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQL-------------------------SGPVPLNLGMMPNMEILDLSGNELSY----FPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLV--HLQPSSP----WLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALAL 759
            W N       S   CSW GV CD E GNV G+ LS++ L G ++  + L N++ L  ++LSDN                           SG VP+ +  M N+  LDLS N L        +   + ++ L  L+L +  IS   P    N T  +   L    LQ   P     LP L +L +G N+ N +GY  L        L+ L+L     +GS+  ++ +
Sbjct:   71 WNNPQQGETSSGNCCSWDGVECDEETGNVVGLDLSSSCLYGTINSTSTLYNLVHLRRLNLSDNHFNYSLIPTSMGQFSEMTHLDLSASAFSGQVPVEISKMSNLSSLDLSENYLELKNPNMRSLVQNLSTGLEILNLNHVLISSEVPDVLANFTSLTLLGLYDCELQGEFPAKIFQLPNLENLSIGSNS-NLSGY--LPEFLRPSPLKILNLEGTRFSGSLPSSIQM 294          
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Hypothetical (protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q387_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.010e-8
Identity = 53/149 (35.57%), Postives = 76/149 (51.01%), Query Frame = 1
Query:  148 LEALYYATNGQAWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMEILDLSGNELSYFPAAWGSG-ASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQ 591
            LE LY +TNG  W N+ GW  D   VCSWYG+TCDS+  N+  I+LS N L G  S    + N+  L  ++LS N +     + +    ++  L LS  ++S   +  G G A+ L +L L  + ISG  P           Y L+HL+
Sbjct:  858 LEELYISTNGGEWTNNEGWLQDG-DVCSWYGITCDSDNVNIIEINLSENNLYGTPSPL--IFNIPRLTTLNLSSNAIDFDF-VGIEAAGDLRTLYLSETQVS---SMQGIGKATSLNYLHLTGSYISGMIP--------EELYDLIHLR 991          
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V9M6_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.240e-8
Identity = 65/207 (31.40%), Postives = 93/207 (44.93%), Query Frame = 1
Query:  148 LEALYYATNGQAWANSTGWSDDSLGVCSWYGVT--CDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMEILDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQPSSPWLPELRSLLLGGNNMNATGYVALQAVANWR--SLQTLDLSDNALTGSVDDALA 756
            L  LYYAT G  W ++TGW   S   C+WYG T   D+   N     LS+N+                   + L+++ L G +P  L ++  +    LSGN+L   PA   +  S ++ L L +N+++G  P    N +DSS +              L  L+L  N  N T    LQ     R   L TLDLS N LTG++ D +A
Sbjct:  121 LATLYYATGGPQWKDTTGWLS-SASECTWYGQTPRIDTHAPNSALCDLSDNV-----------------RYLVLNNHNLIGTLPPELALLREIREWRLSGNDLQG-PAPRLATWSFVQLLDLSDNQLTGPLPLPQDNASDSSLFGA-----------SLTELVLNDNLFNDT----LQEFNLTRVSQLSTLDLSRNLLTGALPDTMA 293          
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZ34_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.770e-8
Identity = 36/99 (36.36%), Postives = 49/99 (49.49%), Query Frame = 1
Query:  157 LYYATNGQAWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMEILDLSGNELS 453
            LYY TNG  W NST W D  L  C W+GV CD            N+ +                 E+DLSDN ++GP+P  LG + +++ L++S N LS
Sbjct:  271 LYYTTNGTFWTNSTDWMDSDLSECEWHGVVCD-----------GNSFI----------------REIDLSDNNITGPIPYELGSLSSLKFLNMSFNLLS 342          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Hypothetical0.000e+088.45leucine rich repeat and GCG domain-containing rece... [more]
Hypothetical4.550e-4232.94leucine rich repeat and GCG domain-containing rece... [more]
Cf-4/93.470e-931.33disease resistance family protein n=1 Tax=Salix su... [more]
receptor-like5.090e-928.63protein 7 n=1 Tax=Ziziphus jujuba var. spinosa Tax... [more]
Hypothetical6.110e-931.69protein n=2 Tax=Proboscia inermis TaxID=420281 Rep... [more]
receptor-like6.890e-928.63protein 7 n=2 Tax=Ziziphus jujuba TaxID=326968 Rep... [more]
receptor-like7.630e-928.63protein 7 n=2 Tax=Ziziphus jujuba TaxID=326968 Rep... [more]
Hypothetical1.010e-835.57protein n=2 Tax=Chaetoceros debilis TaxID=122233 R... [more]
Hypothetical1.240e-831.40protein (Fragment) n=1 Tax=Amphiprora paludosa Tax... [more]
Uncharacterized1.770e-836.36protein n=1 Tax=Pseudo-nitzschia multistriata TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1091contigEcto-sp9_F_contig1091:18001..26183 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1334.7
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FVL6
KEGG koko:K17307
EggNOG free text desc.calcium ion binding
EggNOG OGsKOG1217@1,KOG1217@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04147
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionLeucine rich repeat and GCG domain-containing protein
Ec32 orthologEc-01_009330.1
Exons13
Model size2751
Cds size2751
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928320.6473887-CDS-Ecto-sp9_F_contig1091:18000..185271622928320.6473887-CDS-Ecto-sp9_F_contig1091:18000..18527Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 18001..18527 +
1692277831.996408-CDS-Ecto-sp9_F_contig1091:18000..185271692277831.996408-CDS-Ecto-sp9_F_contig1091:18000..18527Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 18001..18527 +
1622928320.6604588-CDS-Ecto-sp9_F_contig1091:18803..191411622928320.6604588-CDS-Ecto-sp9_F_contig1091:18803..19141Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 18804..19141 +
1692277832.0061293-CDS-Ecto-sp9_F_contig1091:18803..191411692277832.0061293-CDS-Ecto-sp9_F_contig1091:18803..19141Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 18804..19141 +
1622928320.674958-CDS-Ecto-sp9_F_contig1091:19472..197971622928320.674958-CDS-Ecto-sp9_F_contig1091:19472..19797Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 19473..19797 +
1692277832.0134237-CDS-Ecto-sp9_F_contig1091:19472..197971692277832.0134237-CDS-Ecto-sp9_F_contig1091:19472..19797Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 19473..19797 +
1622928320.6872125-CDS-Ecto-sp9_F_contig1091:20050..202401622928320.6872125-CDS-Ecto-sp9_F_contig1091:20050..20240Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 20051..20240 +
1692277832.0208297-CDS-Ecto-sp9_F_contig1091:20050..202401692277832.0208297-CDS-Ecto-sp9_F_contig1091:20050..20240Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 20051..20240 +
1622928320.7024188-CDS-Ecto-sp9_F_contig1091:20667..208021622928320.7024188-CDS-Ecto-sp9_F_contig1091:20667..20802Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 20668..20802 +
1692277832.0289106-CDS-Ecto-sp9_F_contig1091:20667..208021692277832.0289106-CDS-Ecto-sp9_F_contig1091:20667..20802Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 20668..20802 +
1622928320.717534-CDS-Ecto-sp9_F_contig1091:21372..215831622928320.717534-CDS-Ecto-sp9_F_contig1091:21372..21583Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 21373..21583 +
1692277832.0382082-CDS-Ecto-sp9_F_contig1091:21372..215831692277832.0382082-CDS-Ecto-sp9_F_contig1091:21372..21583Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 21373..21583 +
1622928320.7303557-CDS-Ecto-sp9_F_contig1091:22068..222321622928320.7303557-CDS-Ecto-sp9_F_contig1091:22068..22232Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 22069..22232 +
1692277832.0479774-CDS-Ecto-sp9_F_contig1091:22068..222321692277832.0479774-CDS-Ecto-sp9_F_contig1091:22068..22232Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 22069..22232 +
1622928320.7453334-CDS-Ecto-sp9_F_contig1091:22695..228391622928320.7453334-CDS-Ecto-sp9_F_contig1091:22695..22839Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 22696..22839 +
1692277832.060469-CDS-Ecto-sp9_F_contig1091:22695..228391692277832.060469-CDS-Ecto-sp9_F_contig1091:22695..22839Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 22696..22839 +
1622928320.7591586-CDS-Ecto-sp9_F_contig1091:23445..235251622928320.7591586-CDS-Ecto-sp9_F_contig1091:23445..23525Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 23446..23525 +
1692277832.0677705-CDS-Ecto-sp9_F_contig1091:23445..235251692277832.0677705-CDS-Ecto-sp9_F_contig1091:23445..23525Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 23446..23525 +
1622928320.7714515-CDS-Ecto-sp9_F_contig1091:24092..242761622928320.7714515-CDS-Ecto-sp9_F_contig1091:24092..24276Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 24093..24276 +
1692277832.0754085-CDS-Ecto-sp9_F_contig1091:24092..242761692277832.0754085-CDS-Ecto-sp9_F_contig1091:24092..24276Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 24093..24276 +
1622928320.783316-CDS-Ecto-sp9_F_contig1091:24551..246801622928320.783316-CDS-Ecto-sp9_F_contig1091:24551..24680Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 24552..24680 +
1692277832.089645-CDS-Ecto-sp9_F_contig1091:24551..246801692277832.089645-CDS-Ecto-sp9_F_contig1091:24551..24680Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 24552..24680 +
1622928320.7937734-CDS-Ecto-sp9_F_contig1091:25247..253971622928320.7937734-CDS-Ecto-sp9_F_contig1091:25247..25397Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 25248..25397 +
1692277832.1016095-CDS-Ecto-sp9_F_contig1091:25247..253971692277832.1016095-CDS-Ecto-sp9_F_contig1091:25247..25397Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 25248..25397 +
1622928320.807675-CDS-Ecto-sp9_F_contig1091:26009..261831622928320.807675-CDS-Ecto-sp9_F_contig1091:26009..26183Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 26010..26183 +
1692277832.1097353-CDS-Ecto-sp9_F_contig1091:26009..261831692277832.1097353-CDS-Ecto-sp9_F_contig1091:26009..26183Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1091 26010..26183 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1091.795.1prot_Ecto-sp9_F_contig1091.795.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1091 18001..26183 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1091.795.1

>prot_Ecto-sp9_F_contig1091.795.1 ID=prot_Ecto-sp9_F_contig1091.795.1|Name=mRNA_Ecto-sp9_F_contig1091.795.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=917bp
MTPFPLCHMLFLPWPSGLVRALWAAVATAGYLCPTAFASAYTEEVQIAGL
EALYYATNGQAWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLL
VGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMEILDLSGNEL
SYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQPSS
PWLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDA
LALYYYCDGSGSSGCGGNVSSVAAPLLRVLNVGGNDLIGSPPRVVDTDNR
RIDLLDVSDNGNFVGEVPASYAELLILFAENTGLSGLDLPDFIDATTTTA
AGAWNEKSTVHDLFVCPAFKPSADENVAAVTLDHAYDGYSVCTCNDGLQG
SGGGSECSECPLGSYRNLEEEDDPLAEGVCSPCPSNSTTLQNGSWLKSQC
VCATNFYDEQGGADSEPSCLACPSGSRTLTAGAMNITSCECEPGRIFNTT
SGACESCGAGTYKPAYGNHIGLCLPCPAGTYSDTVRATSQSDCEECPLGF
YGGSYGLSSVTGCVECPAGTFGAVQGLSSESMCTDCWPGYYSGSVGASSY
ETCIECPSNHSQPIDGSSSLLDCIPCDDNQVANEGSAECTDEFSEDGTLI
GLYLLIVGIILVVFTLVGVFLQKHCGDAIPVKEKVHMKLNEEMKSFIYGQ
QFWISLFSGVEIMDLMSDLGAYASLLYTAALTGAMKVVYTIVVAFALVAS
LHGVHTRAMIILDMQEERMHGLAITGNNMLYYEKQFTILQIMSQKRTCRI
HVPFDRGNKYLSHHIGVQRLISLNSMRIIIAIFEDVPFLGLNMYLLMTQP
DLASNLVFMMSFVMSIFVLGYKMTLLEKHARLQIRKWNLEARMDTDTMLN
KKAARGRRFSWACQQCE
back to top

mRNA from alignment at Ecto-sp9_F_contig1091:18001..26183+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1091.795.1 ID=mRNA_Ecto-sp9_F_contig1091.795.1|Name=mRNA_Ecto-sp9_F_contig1091.795.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=8183bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1091:18001..26183+ (Ectocarpus species9 EcSCA_722f female)
ATGACACCCTTTCCGCTATGCCATATGTTGTTCCTGCCGTGGCCGAGCGG TCTTGTCAGAGCGTTGTGGGCAGCGGTGGCGACAGCGGGGTATTTGTGTC CGACAGCATTCGCCTCGGCATACACCGAAGAAGTTCAAATAGCGGGGCTC GAGGCCCTGTACTACGCAACCAACGGGCAGGCTTGGGCCAACTCGACGGG GTGGTCAGATGACTCGCTTGGCGTCTGCAGCTGGTACGGAGTCACGTGCG ATAGCGAAGGTGGTAACGTGACGGGCATTTCGCTGTCCAACAACCTGTTG GTGGGCGACGTATCCGAGGCGACCGACCTCACCAATGTCATCTCGCTCGA AGAAATGGATCTATCCGACAACCAACTATCTGGCCCGGTGCCTTTGAATC TTGGGATGATGCCTAACATGGAGATACTCGATCTTTCTGGTAACGAGCTG TCATACTTCCCGGCCGCATGGGGAAGTGGTGCATCGATGCTACGGCACTT ATCGCTGCAGAACAACAGAATATCCGGGTGAGAGCATTCGACACACACAC GTGCATTTGAAATTTTAGGAACAATTGCCGTACGTTGTAGAAGCATGCGA TATTTACTAGTACTTGCTGTCAGCATTAGGGGCTGTGGTCAACACAAGAA ATTACTCTAAACGCAACAGCCAACCTTTTGGCCAATGTCGACTTCACGAC CGAATGCCTTCTCGACGTGTGTATGTGGTACTGCGAGGTTCTCAAAACGT GTCTTACCGAGCCCTCTCCTTTGAATGCACATTCCCGGACGACACGCACC CAGCTCGTTTCCAGCTGCCTGGCTAAACGTGACCGACAGTTCTTCCTACC CACTGGTTCACCTTCAGCCTTCATCACCATGGCTACCAGAACTCCGGAGC CTGCTGCTCGGAGGAAACAATATGAATGCCACAGGATACGTTGCGCTGCA GGCAGTGGCCAACTGGAGATCGCTCCAGACTCTGGACTTGAGCGATAACG CCCTGACCGGATCCGTGGACGACGCTCTTGCTCTGTACTACTATTGCGAT GGGTCTGGAAGCTCGGGATGCGGAGGGAATGTATCGAGCGTTGCGGCACC TCTATTGCGCGTGTTAAATGTGGGCGGGAACGACTTAATAGGTGAAACAT GGAGAAGTTGAAAATAGGCACTCGTAGAGCCGGAGATGCCCACAGGATTG AGAGAAAACTGGGAGAGGGCCAAAACATGGGATGCTAGTGATTTGCAAGA AGGAAACGAATGGTGTGAAATTGCCTGAGTCGGTCCGTCTACGTGCTCAC ACAAGCATCGTGTTTCGTAGAACAAACAAAAGCACTGTGCTGTCATCGTC GCTGACTACAACCATAGCGCTGAAGAGGTCATGTTTCATCCTCCATGTCC ACGGTTCAAAAATATTTCGCTCAAACTGCTCTCTTTGTGCTTTTCATCTG CGCTGTGCAACTTATCAACAAGGGTCGCCGCCACGAGTGGTAGATACGGA CAACAGGCGGATAGATCTCCTTGACGTTTCCGACAACGGTAACTTTGTCG GAGAGGTCCCGGCTTCCTACGCGGAGCTGCTCATTCTCTTCGCGGAAAAC ACCGGCCTTTCAGGCTTAGACTTGCCAGATTTCATCGACGCCACCACTAC TACGGCGGCCGGTGCATGGAATGAGAAATCGACAGTGCATGACCTCTTTG TGTGCCCGGCTTTCAAGCCGTCAGCTGATGAGAATGTCGCAGCAGTCACG CTGGATCATGCCTATGACGGGTACTCGGTCTGCACTTGCAACGACGGGTG AGACATCCCAACTATGCTAAGAATGACGCCTCAACATGGTAGACAATGTT GCCAGGTTGGTTCGCTTTCGAATCGGCGTTGGGGCTGCTGGAACAACCAG CAGGAGCGATTGCTACGTTCTTGTAAGCCTTCCTATTTGCCCTTACTACT GCTAAACACATGTCATGGGACACGTACGTACTGCACTCCCCGTTCTCTGC CCCGCGTGCGCCCCTTCATCCTGCCTCCGTCCGACGATTTGTCCGCGTAG ACTTCAAGGATCGGGCGGTGGCTCCGAGTGCTCGGAGTGCCCGCTGGGAT CGTACCGCAACTTGGAAGAAGAGGACGACCCCCTCGCAGAAGGCGTGTGT TCGCCGTGCCCGTCGAATTCGACCACGCTGCAGAACGGCAGCTGGCTCAA GAGTCAGTGTGTTTGCGCGACCAACTTTTACGACGAGCAGGTGTGAGGGT GCAAAGCGAGAAAATGTGCAGGAACCAGCAACTACTATTGAAGTAACCTT CCATTCCCCCCTTGCTAGGAGAAAGAGTTCACCTCCTGCTTTTGAGCTAC TTGTGGGAACATACGGAGACGAGAGTGCATTGGGGTGTCGTACGCTGGTC TCCCGCGATACTGGTGCCTATCGTTAGTCCCTCGATGCGCGGCCTCTTGG TCAGTACCTATCATGTTGTTACGCTCCGGGTGCCCATCCGCCAAACCGAT TGGAACATGCGACTGACTCCTGGAATGCATAGGAGCGGGTCTACCCCTAT CACCTCGGATGGTCCAGATAACAAGAACTATCCATCGCAGCGGGTGACGC CCCCTCCACCCCCCACTTCCTTCTACTACTGGCGGTCGTCTTTTGCTCGC TTCCGACATTGTTTCAGGGAGGGGCTGACTCCGAGCCGTCTTGCTTGGCG TGTCCCTCGGGGTCGAGAACGCTGACGGCCGGAGCCATGAATATCACGTC CTGTGAATGTGAACCAGGGCGCATCTTCAACACCACGAGTGGAGCTTGCG AGGTAGAATTCACCGTCAACTGCTGTAGTCAACTTAGCGTGTATGGCCTC GTTTCTTTTCCCGCCGCAATGTGTAATGTTTGTACGAATCATCGATCGCC ATGTGCCTTGGTTTGCGATTCGCGGCTCCGACAAACGTTGAAGGTTCAGC TTCCGGAGTAGCGGAAGCCGGGCAGGCACAGCTTGTTTGTGATTGAGTAC TGCTTGTGCACAGAACTGGCAAGCAGGCTTCTAAACCCGTGGATTGGCCT GAATGGTTGTCATCATCCCCTACGACGTGTTGGACCTTGTTGAATCTCGT CTGGCGTATGTACATGGTATAGTCCAGTCTTTCCCCGGAGCTAATCCCAA GCACAGCGAATGGTCTCCGATGGTCCTTACTGCCAGGACCGATCTGTGGT AGAATAACACTGCGCCGCGCACGTTCCCGCTGCGTTCACACCCGCGCACG TTCCCGCTGCGTTCACACCCTCCCCCCGGCGACGGCTTTCCGTGAGTACA AAAACGCCTCCGCTGCTGCCCCCGCCCCCCTGCTGCTCGATAACGGCCCA ACACCCCACCATCATGAAAAAGAGCTGCGGCGCCGGCACCTACAAACCTG CGTACGGAAATCATATCGGGCTGTGCCTCCCGTGTCCGGCCGGGACATAC TCCGACACGGTCAGGGCCACGTCTCAGTCCGATTGCGAGGAGTGTCCTCT GGGGTTCTACGGAGGATCGTACGGCTTGTCTTCGGTGACGGGATGCGTGG AGTGTCCAGCTGGGACGTTCGGGGCCGTACAAGGTGGGAGACGGTGGCGG CCGTTTGGATGACATCCGAAGGGCGGGGGGGGGGTGATGCCGCCATCGTG TGTTTGGGGGGACGGGGAGAAACATATTTCTGGTAACAGAACACCCACGT CTAAGCGATGTGTCTGCTTGAACAGATCGTCAGATGGGAGGCAGACAAAG TACTGCAAAACCGGTTCCATCGTAAACCGATCATGATGGCCCACATTACC GGGCGAAGACATCGTCGGGGTTGTCACAAATACTCCCCGTGGACGCGAAA AGGCGACGTGTTGGATCGCTCTGGTGTTTCCTAGGGACAGAAACAGCGAG TGGCGAGTTCTTGTACTTGCCGAACTATGTCAGCGTGGCAAGGGGTTCTT TCGCTCGAGAAGTCACCTCGCATTCCCTTTCAGATGTTGCATATTCCCTG TTCTCCGGAGGTCCTTCTCTCGCAGATGGTTCTACGGCGAGGCTTAACCC TTTTTTGCGCTTCTTCAGGCCTCTCCTCGGAGAGCATGTGCACCGACTGC TGGCCCGGGTACTACTCGGGAAGCGTGGGAGCGAGCAGCTACGAGACCTG CATCGAGTGCCCTTCGAACCATTCGCAGCCGATAGACGGGTCGTCGTCGC TCTTAGACTGCATTCCCTGCGATGACAACCAGGTGAGACCGTGCTCGTGA AGATCTTCCCTTACCGTGCCTACGCTGGCTGAGACTGTGCGTTGGTGTCA CCATGAAAACTCCTGGAAGCTATGTGCGTGCGTAGCCCCACAGGGTGAGG TGAGAGAGGGGCGGCAAGCGAGCGCTGGAACAAGCAGGATTTATTTACTA CGCATTTTCTGTTTGGCAGCTTGGCGGAGTCGATCTTGTGCTTCTTTCTG CGTTGCAGTGACGAAGTGGTGCTTCGTGGTCTCCCCCCGATACGTCTTCT CAGGTGTGACCGCACTTTTTCATCCAGCCGACCAACCTATCCGAGCAGGG AATCGCTCACTCTCGAGGAAAGGTGGGGGCGAGGAAACCGCCTCTTTGCT GGCCCGTGTGGCGGACCTTTCACACCCGTGTTGTCTTCCACCCTCCTTGG TGTTCCTCGTGAACGCTTGACCGCTCCCCTTGGCAACCCAAAAAGGTGGC CAACGAAGGATCAGCTGAGTGCACGGATGAGTTTTCCGAGGACGGCACGC TTATCGGGCTGTACCTCCTGATCGTAGGGATAATCTTGGTGGTGTTCACC CTCGTGGGGGTGTTCTTGCAGAAGCACTGCGGGGATGCGGTGAGTCAAGA CGACAACGTCGAGATATTTAGCGCTCCCTAACGCTGCATGTATACCTGTA TCTGTATGTGTAGCCGCTGCACCAGGAGACGCGTGTAAGCACGCACACGT TTGCATCCTTATTACGGTAGTTGTGTGGCTTACATCGTGTGCCGAATCGC CACTTTTCCCCCGAGATGTTCTCGTATCGCAACGATGTGGTGCAGTCGTA TCTGTACCCGTGCCACGGTGATTCTTGCTCTAGGCCTCAGTCCCTTCCTG ATCCTGCGCTCAACTACGCACACAAAAGAAATAAATAGTTGTACACACGA AAGCGTCTTTACAGAAACGAGTGCCTCTCCCCCGAACCAGTACGAGTTTT GGCAGAATGGTGTCGTCATCGATCTACCAGTTGATTGCATCCCGAATCAA CTTCACAGCCGCTTTCGTCACCCGGTTGGCTTGCGCATGAAGCTCTCAGT TCTTGGCAGAGGGTCAAGCGCAGGTGGCTCTTTGTGTCTCAGTATTCGCC CGGCTCGCGGTTAGACAGAAAGAGCTTCTTCCACCGCCTCCTACCCATCA CTAACAGAGCACGGCCGCGACCGACCTGTTGTACGAATGCAACAGATACC GGTAAAGGAGAAGGTGCACATGAAGCTGAACGAGGAGATGAAAAGCTTCA TATATGGGCAGCAGTTCTGGATAAGGTCAGTCGAGATTCTAATTTGAAAA GCAGGAGCCAATTCCGTCAACCCAAACGTTTATTGATTCATGGAGGGAGG AAGCAATGGCATTCGCTCCATGTTATCGCAAGGTTCCAACAACGCCGTCG CGTATACTTGTCCCTAGCCCGGTTTACGGCGAGGTGTGGCCTAGTTGTTT GTGATTACATACAGTTCCGAGAATCTGCCAAAGGAGTCACAGTCTCTTCA GTGGGGTGAGGAGAGACAAACCAAGACGCCCAAACCTTGAGTGACCCTCA CCATACCCCCACTTTGTACCATTAAATACCCATTGGTTTGTCTAGACCTG TAGGAGTATCCGTCAACGGTAGCACTTCGTCGGAATACCTTCTGAAAAGC ATACCGTGACAGTCGCTGTAGGGTTGGCATGGACCTCATGACGAAATCCA CGTAACCCGAACCAAGCTAAAGTTGTTGATCAACTTGTCCACCACACTGT TGGTTCGCATCAGCAACAGCAGCTGCAGCTGCAGCCGTACTAACTTGGGA ATGCCGCGTGCATCTACGCCAAACTCATCACCACCTTGACAGTCTCTTCA GCGGCGTGGAGATCATGGACCTCATGTCGGACCTCGGGGCGTACGCATCG CTGCTCTACACAGCCGCGCTCACCGGCGCTATGAAAGTGGTCTACACCAT CGTCGTGGCCTTTGCGCTGGTGGCCTCGCTCCACGGAGTTCACACCCGGG CCATGATTATCCTCGACATGCAGGAGGTACGCAAAACCATGCATTTGACG CTACACTACTTGTTCGTAGAGAGAGGTGGTCGGCCTTCTGTTTAACGAGG CAGTTGGCAAACTTGTGGCTAAATAGGCGAAGAGCTTCAGGCCAGGATGA GCCTAAAGATAGATAGACCGTTCCAAAACCGCCCAAAGATCCATCTCACC CCTCCCAACACCATCATCCTAAGCTTGACCAAGCCCTCCCCCTTAAGGTC CCGTCTCTCCCCCCCCCCACCTCTTGTGCATGACCGGCGACTTAAAACCA GGAGCGAATGCACGGGCTAGCGATCACCGGAAACAACATGCTGTACTACG AGAAGCAATTCACAATATTGCAGATCATGAGTCAGAAACGGACTTGCCGT ATCCACGTGCCGTTCGACCGTGGCAACAAGGTGGGGGTGATGCTACGTAG GAGTTTAGCATCAGCGATCGTTTTCTAAGCACGCCCAAGACTTCAAGTAG GCGTTGACTAATGGTCTAGTGTATACATGGCGTATATAATGAGCAATACT AGAGCAGCGAAGGGGCTCAGAAGGTGCGCACCTACCGGTGAAGAAATGCT CCAGCAACGCGTTTTTTGGTCCACTTCAGGCCTTGACGTAGTTTCGTCGA CGTCGTTGTACCCGACGTTGTACTTCGTTTTACCAGTTGGGAATACAGTC AAGCTTCGTCGTGATCGTTTGACAAGGCGAAACCAACCATGTATGTTTTC GATGAAAATGGCGCGTATGAAGCAAACAAGACACAGAAATGCTGACCAAC GCCCCTCGATTGATTGTCACGGTCTGTTGCCGCTGTCTCTAGTTAAAGCG TTCAGGTTCTGCCGGGGTTGCTGAGGTAACGTTGGTTCTTACGTTCTCTT TAACGTACTGTCGCCCTTTGTCGGGCCAATGCTGTCGTGCCACTGTCGGA TTGTACGCGAACACTACCACCACCGTGTTCATGAACCCTGCATGCAGTAC TTGAGCCATCACATCGGCGTCCAGCGCCTGATAAGTCTAAACTCCATGAG GATCATCATCGCCATTTTCGAGGACGTGCCCTTCCTGGGTCTCAACATGT ACCTCCTCATGACGCAGCCCGACCTTGCCAGCAATCTCGTCTTCATGGTG CGTTCCCTATTGACACCGCCTTGGTTCATTTTCTCGCGCATCGGCGTCAC CTCTAACGGCGAAGGGGAGGGGGGAGGTTAGGTTGGGGTAGTCTCTGTTT CATTTGTTTATTTGTGAGTACAGATGAACGTACTGTGATCGGTTGGTGGC GACTTGGGGCAAAGAAAGCTGTACTTGTTTGCAGCGGCGATGTTCGTTCA ACGTCTTCAGGGGCAGGGGCAGAAGATTGAATGGCTCGGAACGCTTCAAT CATTTTAGTTTTTTGGAGCGACCTTGAAGAAACTGTCTTGACCTCTGGGA AAGCTCAGTCGATCCTATCAGTATTTTTCATTTCACCTCGGTCGTATGAT TGGTAGTCGTGACATGACAATCATCTACTGCTCTTGAATATAGACAACGT CCCGTCTTGCGCTTCAATTCCGCACAACGTGCTTGGTGTACCCTTGAATC AACGTGTATATTGATGTCCGCAAAGTGTTCGCGAGTGTATCCAGTTTTGG GCAGTGCGAGCAACCGTGCGTGATAGGTTCTACAGGCGCTCAGCGGGTGC CTAGGTACTCATCGCAACATTTAACGCTGCCATGAATCTTTACACCCGGC GTCCGTCAGATGAGCTTCGTGATGTCGATATTTGTTCTGGGGTACAAGAT GACACTCCTGGAGAAGCACGCGAGGCTCCAGATTCGGAAGTGGAACCTGG AGGCCAGGATGGACACGGACACAATGCTCAACAAGAAGGCGGCCAGGGGG AGGCGCTTCTCCTGGGCGTGTCAGCAGTGTGAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1091:18001..26183+

>mRNA_Ecto-sp9_F_contig1091.795.1 ID=mRNA_Ecto-sp9_F_contig1091.795.1|Name=mRNA_Ecto-sp9_F_contig1091.795.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=5502bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1091:18001..26183+ (Ectocarpus species9 EcSCA_722f female)
ATGACACCCTTTCCGCTATGCCATATGTTGTTCCTGCCGTGGCCGAGCGG
TCTTGTCAGAGCGTTGTGGGCAGCGGTGGCGACAGCGGGGTATTTGTGTC
CGACAGCATTCGCCTCGGCATACACCGAAGAAGTTCAAATAGCGGGGCTC
GAGGCCCTGTACTACGCAACCAACGGGCAGGCTTGGGCCAACTCGACGGG
GTGGTCAGATGACTCGCTTGGCGTCTGCAGCTGGTACGGAGTCACGTGCG
ATAGCGAAGGTGGTAACGTGACGGGCATTTCGCTGTCCAACAACCTGTTG
GTGGGCGACGTATCCGAGGCGACCGACCTCACCAATGTCATCTCGCTCGA
AGAAATGGATCTATCCGACAACCAACTATCTGGCCCGGTGCCTTTGAATC
TTGGGATGATGCCTAACATGGAGATACTCGATCTTTCTGGTAACGAGCTG
TCATACTTCCCGGCCGCATGGGGAAGTGGTGCATCGATGCTACGGCACTT
ATCGCTGCAGAACAACAGAATATCCGGATGACACCCTTTCCGCTATGCCA
TATGTTGTTCCTGCCGTGGCCGAGCGGTCTTGTCAGAGCGTTGTGGGCAG
CGGTGGCGACAGCGGGGTATTTGTGTCCGACAGCATTCGCCTCGGCATAC
ACCGAAGAAGTTCAAATAGCGGGGCTCGAGGCCCTGTACTACGCAACCAA
CGGGCAGGCTTGGGCCAACTCGACGGGGTGGTCAGATGACTCGCTTGGCG
TCTGCAGCTGGTACGGAGTCACGTGCGATAGCGAAGGTGGTAACGTGACG
GGCATTTCGCTGTCCAACAACCTGTTGGTGGGCGACGTATCCGAGGCGAC
CGACCTCACCAATGTCATCTCGCTCGAAGAAATGGATCTATCCGACAACC
AACTATCTGGCCCGGTGCCTTTGAATCTTGGGATGATGCCTAACATGGAG
ATACTCGATCTTTCTGGTAACGAGCTGTCATACTTCCCGGCCGCATGGGG
AAGTGGTGCATCGATGCTACGGCACTTATCGCTGCAGAACAACAGAATAT
CCGGCTCGTTTCCAGCTGCCTGGCTAAACGTGACCGACAGTTCTTCCTAC
CCACTGGTTCACCTTCAGCCTTCATCACCATGGCTACCAGAACTCCGGAG
CCTGCTGCTCGGAGGAAACAATATGAATGCCACAGGATACGTTGCGCTGC
AGGCAGTGGCCAACTGGAGATCGCTCCAGACTCTGGACTTGAGCGATAAC
GCCCTGACCGGATCCGTGGACGACGCTCTTGCTCTGTACTACTATTGCGA
TGGGTCTGGAAGCTCGGGATGCGGAGGGAATGTATCGAGCGTTGCGGCAC
CTCTATTGCGCGTGTTAAATGTGGGCGGGAACGACTTAATAGCTCGTTTC
CAGCTGCCTGGCTAAACGTGACCGACAGTTCTTCCTACCCACTGGTTCAC
CTTCAGCCTTCATCACCATGGCTACCAGAACTCCGGAGCCTGCTGCTCGG
AGGAAACAATATGAATGCCACAGGATACGTTGCGCTGCAGGCAGTGGCCA
ACTGGAGATCGCTCCAGACTCTGGACTTGAGCGATAACGCCCTGACCGGA
TCCGTGGACGACGCTCTTGCTCTGTACTACTATTGCGATGGGTCTGGAAG
CTCGGGATGCGGAGGGAATGTATCGAGCGTTGCGGCACCTCTATTGCGCG
TGTTAAATGTGGGCGGGAACGACTTAATAGGGTCGCCGCCACGAGTGGTA
GATACGGACAACAGGCGGATAGATCTCCTTGACGTTTCCGACAACGGTAA
CTTTGTCGGAGAGGTCCCGGCTTCCTACGCGGAGCTGCTCATTCTCTTCG
CGGAAAACACCGGCCTTTCAGGCTTAGACTTGCCAGATTTCATCGACGCC
ACCACTACTACGGCGGCCGGTGCATGGAATGAGAAATCGACAGTGCATGA
CCTCTTTGTGTGCCCGGCTTTCAAGCCGTCAGCTGATGAGAATGTCGCAG
CAGTCACGCTGGATCATGCCTATGACGGGTACTCGGTCTGCACTTGCAAC
GACGGGGTCGCCGCCACGAGTGGTAGATACGGACAACAGGCGGATAGATC
TCCTTGACGTTTCCGACAACGGTAACTTTGTCGGAGAGGTCCCGGCTTCC
TACGCGGAGCTGCTCATTCTCTTCGCGGAAAACACCGGCCTTTCAGGCTT
AGACTTGCCAGATTTCATCGACGCCACCACTACTACGGCGGCCGGTGCAT
GGAATGAGAAATCGACAGTGCATGACCTCTTTGTGTGCCCGGCTTTCAAG
CCGTCAGCTGATGAGAATGTCGCAGCAGTCACGCTGGATCATGCCTATGA
CGGGTACTCGGTCTGCACTTGCAACGACGGACTTCAAGGATCGGGCGGTG
GCTCCGAGTGCTCGGAGTGCCCGCTGGGATCGTACCGCAACTTGGAAGAA
GAGGACGACCCCCTCGCAGAAGGCGTGTGTTCGCCGTGCCCGTCGAATTC
GACCACGCTGCAGAACGGCAGCTGGCTCAAGAGTCAGTGTGTTTGCGCGA
CCAACTTTTACGACGAGCAGACTTCAAGGATCGGGCGGTGGCTCCGAGTG
CTCGGAGTGCCCGCTGGGATCGTACCGCAACTTGGAAGAAGAGGACGACC
CCCTCGCAGAAGGCGTGTGTTCGCCGTGCCCGTCGAATTCGACCACGCTG
CAGAACGGCAGCTGGCTCAAGAGTCAGTGTGTTTGCGCGACCAACTTTTA
CGACGAGCAGGGAGGGGCTGACTCCGAGCCGTCTTGCTTGGCGTGTCCCT
CGGGGTCGAGAACGCTGACGGCCGGAGCCATGAATATCACGTCCTGTGAA
TGTGAACCAGGGCGCATCTTCAACACCACGAGTGGAGCTTGCGAGGGAGG
GGCTGACTCCGAGCCGTCTTGCTTGGCGTGTCCCTCGGGGTCGAGAACGC
TGACGGCCGGAGCCATGAATATCACGTCCTGTGAATGTGAACCAGGGCGC
ATCTTCAACACCACGAGTGGAGCTTGCGAGAGCTGCGGCGCCGGCACCTA
CAAACCTGCGTACGGAAATCATATCGGGCTGTGCCTCCCGTGTCCGGCCG
GGACATACTCCGACACGGTCAGGGCCACGTCTCAGTCCGATTGCGAGGAG
TGTCCTCTGGGGTTCTACGGAGGATCGTACGGCTTGTCTTCGGTGACGGG
ATGCGTGGAGTGTCCAGCTGGGACGTTCGGGGCCGTACAAGAGCTGCGGC
GCCGGCACCTACAAACCTGCGTACGGAAATCATATCGGGCTGTGCCTCCC
GTGTCCGGCCGGGACATACTCCGACACGGTCAGGGCCACGTCTCAGTCCG
ATTGCGAGGAGTGTCCTCTGGGGTTCTACGGAGGATCGTACGGCTTGTCT
TCGGTGACGGGATGCGTGGAGTGTCCAGCTGGGACGTTCGGGGCCGTACA
AGGCCTCTCCTCGGAGAGCATGTGCACCGACTGCTGGCCCGGGTACTACT
CGGGAAGCGTGGGAGCGAGCAGCTACGAGACCTGCATCGAGTGCCCTTCG
AACCATTCGCAGCCGATAGACGGGTCGTCGTCGCTCTTAGACTGCATTCC
CTGCGATGACAACCAGGCCTCTCCTCGGAGAGCATGTGCACCGACTGCTG
GCCCGGGTACTACTCGGGAAGCGTGGGAGCGAGCAGCTACGAGACCTGCA
TCGAGTGCCCTTCGAACCATTCGCAGCCGATAGACGGGTCGTCGTCGCTC
TTAGACTGCATTCCCTGCGATGACAACCAGGTGGCCAACGAAGGATCAGC
TGAGTGCACGGATGAGTTTTCCGAGGACGGCACGCTTATCGGGCTGTACC
TCCTGATCGTAGGGATAATCTTGGTGGTGTTCACCCTCGTGGGGGTGTTC
TTGCAGAAGCACTGCGGGGATGCGGTGGCCAACGAAGGATCAGCTGAGTG
CACGGATGAGTTTTCCGAGGACGGCACGCTTATCGGGCTGTACCTCCTGA
TCGTAGGGATAATCTTGGTGGTGTTCACCCTCGTGGGGGTGTTCTTGCAG
AAGCACTGCGGGGATGCGATACCGGTAAAGGAGAAGGTGCACATGAAGCT
GAACGAGGAGATGAAAAGCTTCATATATGGGCAGCAGTTCTGGATAAGAT
ACCGGTAAAGGAGAAGGTGCACATGAAGCTGAACGAGGAGATGAAAAGCT
TCATATATGGGCAGCAGTTCTGGATAAGTCTCTTCAGCGGCGTGGAGATC
ATGGACCTCATGTCGGACCTCGGGGCGTACGCATCGCTGCTCTACACAGC
CGCGCTCACCGGCGCTATGAAAGTGGTCTACACCATCGTCGTGGCCTTTG
CGCTGGTGGCCTCGCTCCACGGAGTTCACACCCGGGCCATGATTATCCTC
GACATGCAGGAGTCTCTTCAGCGGCGTGGAGATCATGGACCTCATGTCGG
ACCTCGGGGCGTACGCATCGCTGCTCTACACAGCCGCGCTCACCGGCGCT
ATGAAAGTGGTCTACACCATCGTCGTGGCCTTTGCGCTGGTGGCCTCGCT
CCACGGAGTTCACACCCGGGCCATGATTATCCTCGACATGCAGGAGGAGC
GAATGCACGGGCTAGCGATCACCGGAAACAACATGCTGTACTACGAGAAG
CAATTCACAATATTGCAGATCATGAGTCAGAAACGGACTTGCCGTATCCA
CGTGCCGTTCGACCGTGGCAACAAGGAGCGAATGCACGGGCTAGCGATCA
CCGGAAACAACATGCTGTACTACGAGAAGCAATTCACAATATTGCAGATC
ATGAGTCAGAAACGGACTTGCCGTATCCACGTGCCGTTCGACCGTGGCAA
CAAGTACTTGAGCCATCACATCGGCGTCCAGCGCCTGATAAGTCTAAACT
CCATGAGGATCATCATCGCCATTTTCGAGGACGTGCCCTTCCTGGGTCTC
AACATGTACCTCCTCATGACGCAGCCCGACCTTGCCAGCAATCTCGTCTT
CATGTACTTGAGCCATCACATCGGCGTCCAGCGCCTGATAAGTCTAAACT
CCATGAGGATCATCATCGCCATTTTCGAGGACGTGCCCTTCCTGGGTCTC
AACATGTACCTCCTCATGACGCAGCCCGACCTTGCCAGCAATCTCGTCTT
CATGATGAGCTTCGTGATGTCGATATTTGTTCTGGGGTACAAGATGACAC
TCCTGGAGAAGCACGCGAGGCTCCAGATTCGGAAGTGGAACCTGGAGGCC
AGGATGGACACGGACACAATGCTCAACAAGAAGGCGGCCAGGGGGAGGCG
CTTCTCCTGGGCGTGTCAGCAGTGTGAGATGAGCTTCGTGATGTCGATAT
TTGTTCTGGGGTACAAGATGACACTCCTGGAGAAGCACGCGAGGCTCCAG
ATTCGGAAGTGGAACCTGGAGGCCAGGATGGACACGGACACAATGCTCAA
CAAGAAGGCGGCCAGGGGGAGGCGCTTCTCCTGGGCGTGTCAGCAGTGTG
AG
back to top