mRNA_Ecto-sp9_F_contig1091.795.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Hypothetical (leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL6_ECTSI) HSP 1 Score: 1330 bits (3441), Expect = 0.000e+0 Identity = 804/909 (88.45%), Postives = 809/909 (89.00%), Query Frame = 1
Query: 25 MLFLPWPSGLVRALWAAVATAGYLCPTAFASAYTEEVQIAGLEALYYATNGQAWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMEILDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQPSSPWLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALALYYYCDGSGSSGCGGNVSSVAAPLLRVLNVGGNDLIGSPPRVVDTDNRRIDLLDVSDNGNFVGEVPASYAELLILFAENTGLSGLDLPDFIDATTTTAAGAWNEKSTVHDLFVCPAFKPSADENVAAVTLDHAYDGYSVCTCNDGLQGSGGGSECSECPLGSYRNLEEEDDPLAEGVCSPCPSNSTTLQNGSWLKSQCVCATNFYDEQGGADSEPSXXXXXXXXXXXXXXXXXXXXXECEPGRIFNTTSGACESCGAGTYKPAYGNHIGLCXXXXXXXYSDTVRATSQSDCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDNQVANEGSAECTDEFSEDGTLIGLYLLIVGIILVVFTLVGVFLQKHCGDAIPVKEKVHMKLNEEMKSFIYGQQFWISLFSGVEIMDLMSDLGAYASLLYTAALTGAMKVVYTIVVAFALVASLHGVHTRAMIILDMQEERMHGLAITGNNMLYYEKQFTILQIMSQKRTCRIHVPFDRGNKYLSHHIGVQRLISLNSMRIIIAIFEDVPFLGLNMYLLMTQPDLASNLVFMMSFVMSIFVLGYKMTLLEKHARLQIRKWNLEARMDTDTMLNKKAARGRRFSWACQQCE 2751
MLFLPWPSGLVRALWAAVATAGYLCPTAFASAYTEEVQIAGLEALYYATNGQ WANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNME LDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQPSSPWLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALALYYY SPPRVVDTDNRRIDLLDVSDNGNFVGEVPASY+ELLILFAENTGLSGLDLPDFIDATTTTAAGAWNEKSTVHDLFVCPAFKPSADENVAAVTLDHAYDGYSVCTCNDGLQGSGG SECSECPLGSYRNLE+EDDPLAEGVCSPCPSNSTT+QNGSWLKSQCVCA NFYDEQGGADSEPSXXXXXXXXXXXXXX ECEPGRIFNTTS ACESC AGTYKPAYGNH+GLC YSDTV ATSQ DCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DNQVANEGSAECTDEFSEDGTLIGLYLLI GIILVVFTLVGVFLQKHCGDAIPVKEKVHMKLNEEMKSFIYGQQFWISLFSGVEIMDLMSDLGAYASLLYTAALTGAMKVVYTIVVAFALVASLHGVHTRAMIILDMQE YLSHHIGVQRLISLNSMRIIIAIFEDVPFLGLNMYLL+TQPDLASNLVFMMSFVMSIFVLGYKMTLLEKHARLQIRKWNLEARMDTDTMLNKKAARGRRFSWACQQCE
Sbjct: 1 MLFLPWPSGLVRALWAAVATAGYLCPTAFASAYTEEVQIAGLEALYYATNGQDWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMETLDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQPSSPWLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALALYYYW--------------------------------SPPRVVDTDNRRIDLLDVSDNGNFVGEVPASYSELLILFAENTGLSGLDLPDFIDATTTTAAGAWNEKSTVHDLFVCPAFKPSADENVAAVTLDHAYDGYSVCTCNDGLQGSGGDSECSECPLGSYRNLEKEDDPLAEGVCSPCPSNSTTMQNGSWLKSQCVCAINFYDEQGGADSEPSXXXXXXXXXXXXXXAVNIASCECEPGRIFNTTSRACESCVAGTYKPAYGNHVGLCLPCSAGTYSDTVGATSQYDCEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNQVANEGSAECTDEFSEDGTLIGLYLLIAGIILVVFTLVGVFLQKHCGDAIPVKEKVHMKLNEEMKSFIYGQQFWISLFSGVEIMDLMSDLGAYASLLYTAALTGAMKVVYTIVVAFALVASLHGVHTRAMIILDMQE-------------------------------------------YLSHHIGVQRLISLNSMRIIIAIFEDVPFLGLNMYLLVTQPDLASNLVFMMSFVMSIFVLGYKMTLLEKHARLQIRKWNLEARMDTDTMLNKKAARGRRFSWACQQCE 834
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Hypothetical (leucine rich repeat and GCG domain-containing receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL7_ECTSI) HSP 1 Score: 177 bits (448), Expect = 4.550e-42 Identity = 139/422 (32.94%), Postives = 199/422 (47.16%), Query Frame = 1
Query: 115 SAYTEEVQIAGLEALYYATNGQAWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMEILDLSGNELSYFPAAWGSGASMLRHLSLQNNRISG--------SFPAAWLNVTDSSSYPLVHLQPSSPWLPELRSLLLGGNN-MNATGYVALQAVANWRSLQTL--DLSDNALTGSVDDALALYYYCDGS--GSSGCGGNVSSVAAPLLRVLNVGGNDLIGSPPRVVDTDNRRIDLLDVSDNGNFVGEVPASYAELLILFAENTGLSGLDL----PDFIDATTTTAAGAWNEKSTVHDLFVCPAFKPSADENVAAVTLDHAYDGYSVCTCNDGLQGSGGGSECSECPLGSYRNLEEEDDPLAEGVCSPCPSNSTTLQNG 1329
S+Y E Q+ GLEALY AT G+ WA+S+GW D +LGVC WYGV CDS+G NVTG++L+ N L G++SEA +L +V+SL +DLSDN+L GPV L G+MP++E+LDLS N+LSYFP +WG+ AS LRHLSLQ N ISG SFP + +T S + + P +L L GN +N T + + AN + T ++S ++G ++ D S G S C + + + GN G T DL + TG + P F D G V CP+ ++D +V A+++ + C+C G C++C G+Y+ D +C PCP + + Q G
Sbjct: 28 SSYLETQQV-GLEALYNATGGEQWASSSGWRDATLGVCDWYGVVCDSDGRNVTGLALAGNGLAGNLSEAVELFDVLSLISIDLSDNELVGPVALGFGLMPDLEVLDLSRNDLSYFPTSWGTEASSLRHLSLQQNEISGIEGELETHSFPRSLSALTVSDN---LLTGPVPEDCAQLSVFLADGNEGLNDTSLPSFASYANSSDVVTRHNNMSCPVISGQDTAGRGVHLSLDPSYLGYSHC-----------VCIKGMQGNAEDGCQACPEGTYRGAADLF----------ATRSXXXXXXXXXXXTTGSETVSXXKCEPGFYDTLGGVGDG-------VPSCSACPSGSVASD-SVGAISV-------AACSCPAGRYLDEPAETCTDCQAGTYKTTVGND----VSLCVPCPEGTYSPQTG 405
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Cf-4/9 (disease resistance family protein n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836IFC6_9ROSI) HSP 1 Score: 72.0 bits (175), Expect = 3.470e-9 Identity = 78/249 (31.33%), Postives = 114/249 (45.78%), Query Frame = 1
Query: 226 CSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLS-------------------------GPVPLNLGMMPNMEILDLSGN-ELSYFPAAWGS---GASMLRHLSLQNNRISGSFPAAWLNVTDS-SSYPLV--HLQPSSPWLPE--LRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALALYYYCDGSGSSGCGGNVSSVAAPLLRVLNVGGNDLIGS 870
CSW GVTCDSE GNV G+ L+ ++L G + + L ++ L ++DLS N + G VP + + N+ LDLS N EL+ P + + LR L L+ +S P+ +N++ SS L+ LQ P + LR L LG NN TG ++ A +LQ DLS+N+L+G + C GS S+ L VL++G NDL G+
Sbjct: 47 CSWDGVTCDSESGNVIGLDLACSMLYGTLHSNSTLFSLHHLRKLDLSYNDFNLSQISSRFGHFSNLTHLNLNYSAFTGLVPSQISQLSNLVSLDLSLNSELTLEPIPFNKLVQNLTKLRELHLREVDMSLVAPSFLMNLSSPLSSLQLMDCRLQGEFPIFNQESLRVLKLGSNN-KLTGEISSSA-CKLTALQVFDLSNNSLSGFIPQ-------CLGSFSNS------------LSVLHLGMNDLEGT 274
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: receptor-like (protein 7 n=1 Tax=Ziziphus jujuba var. spinosa TaxID=714518 RepID=UPI00202486CA) HSP 1 Score: 70.5 bits (171), Expect = 5.090e-9 Identity = 65/227 (28.63%), Postives = 95/227 (41.85%), Query Frame = 1
Query: 184 WANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQL-------------------------SGPVPLNLGMMPNMEILDLSGNELSY----FPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLV--HLQPSSP----WLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALAL 759
W N S CSW GV CD E GNV G+ LS++ L G ++ + L N++ L ++LSDN SG VP + M N+ LDLS N L + + ++ L L+L + IS P N T + L LQ P LP L +L +G N+ N +GY L L+ L+L +GS+ ++ +
Sbjct: 71 WNNPQQGETSSGNCCSWDGVECDEETGNVVGLDLSSSCLYGTINSTSTLFNLVHLRRLNLSDNHFNYSLIPTSIGQFSEMTHLDLSASAFSGQVPFEISNMSNLSSLDLSENYLKLKNPNMRSLVQNLSTGLEILNLNHVLISSKIPDFLANFTSLTLLGLYDCELQGEFPAKIFQLPNLENLSIGSNS-NVSGY--LPEFLRPSPLKILNLEGTRFSGSLPSSIQM 294
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Hypothetical (protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C5B9_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 6.110e-9 Identity = 45/142 (31.69%), Postives = 73/142 (51.41%), Query Frame = 1
Query: 148 LEALYYATNGQAWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMEILDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSY 573
L+ Y A G+ W ST W + C W+GV C + N + L++N L G +++ ++ N+ LE +DLSDN + G +P +G + + L L+ N +G+ L+ L + NR+SG+ P L V + SSY
Sbjct: 164 LKKFYDAAKGREWTESTLWLHEYESHCLWFGVDCGKDN-NTIKLKLASNGLSGTLTK--NIANLTRLEVLDLSDNDIKGKIPTEIGSLSFLHRLRLNHNFFIGNDTNFGN-LKQLKLLQIHGNRLSGTVPMLNLTVHNRSSY 301
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: receptor-like (protein 7 n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4BSD3_ZIZJJ) HSP 1 Score: 71.6 bits (174), Expect = 6.890e-9 Identity = 65/227 (28.63%), Postives = 97/227 (42.73%), Query Frame = 1
Query: 184 WANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQL-------------------------SGPVPLNLGMMPNMEILDLSGNELSY----FPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLV--HLQPSSP----WLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALAL 759
W N S CSW GV CD E GNV G+ LS++ L G ++ + L N++ L ++LSDN SG VP+ + M N+ LDLS N L + + ++ L L+L + IS P N T + L LQ P LP L++L +G N+ N +GY L L+ L+L +GS+ ++ +
Sbjct: 71 WNNPQQGETSSGNCCSWDGVECDEETGNVVGLDLSSSCLYGTINSTSTLYNLVHLRRLNLSDNHFNYSLIPTSMGQFSEMTHLDLSASAFSGQVPIEISNMSNLSSLDLSENYLELKNPNMRSLVQNLSTGLEILNLNHVLISSEVPDFLANFTSLTFLGLYDCELQGEFPAKIFQLPNLQNLYIGANS-NLSGY--LPEFLRASPLKILNLEGTRFSGSLPSSIQM 294
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: receptor-like (protein 7 n=2 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4A5W4_ZIZJJ) HSP 1 Score: 71.2 bits (173), Expect = 7.630e-9 Identity = 65/227 (28.63%), Postives = 96/227 (42.29%), Query Frame = 1
Query: 184 WANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQL-------------------------SGPVPLNLGMMPNMEILDLSGNELSY----FPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLV--HLQPSSP----WLPELRSLLLGGNNMNATGYVALQAVANWRSLQTLDLSDNALTGSVDDALAL 759
W N S CSW GV CD E GNV G+ LS++ L G ++ + L N++ L ++LSDN SG VP+ + M N+ LDLS N L + + ++ L L+L + IS P N T + L LQ P LP L +L +G N+ N +GY L L+ L+L +GS+ ++ +
Sbjct: 71 WNNPQQGETSSGNCCSWDGVECDEETGNVVGLDLSSSCLYGTINSTSTLYNLVHLRRLNLSDNHFNYSLIPTSMGQFSEMTHLDLSASAFSGQVPVEISKMSNLSSLDLSENYLELKNPNMRSLVQNLSTGLEILNLNHVLISSEVPDVLANFTSLTLLGLYDCELQGEFPAKIFQLPNLENLSIGSNS-NLSGY--LPEFLRPSPLKILNLEGTRFSGSLPSSIQM 294
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Hypothetical (protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q387_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 1.010e-8 Identity = 53/149 (35.57%), Postives = 76/149 (51.01%), Query Frame = 1
Query: 148 LEALYYATNGQAWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMEILDLSGNELSYFPAAWGSG-ASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQ 591
LE LY +TNG W N+ GW D VCSWYG+TCDS+ N+ I+LS N L G S + N+ L ++LS N + + + ++ L LS ++S + G G A+ L +L L + ISG P Y L+HL+
Sbjct: 858 LEELYISTNGGEWTNNEGWLQDG-DVCSWYGITCDSDNVNIIEINLSENNLYGTPSPL--IFNIPRLTTLNLSSNAIDFDF-VGIEAAGDLRTLYLSETQVS---SMQGIGKATSLNYLHLTGSYISGMIP--------EELYDLIHLR 991
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V9M6_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.240e-8 Identity = 65/207 (31.40%), Postives = 93/207 (44.93%), Query Frame = 1
Query: 148 LEALYYATNGQAWANSTGWSDDSLGVCSWYGVT--CDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMEILDLSGNELSYFPAAWGSGASMLRHLSLQNNRISGSFPAAWLNVTDSSSYPLVHLQPSSPWLPELRSLLLGGNNMNATGYVALQAVANWR--SLQTLDLSDNALTGSVDDALA 756
L LYYAT G W ++TGW S C+WYG T D+ N LS+N+ + L+++ L G +P L ++ + LSGN+L PA + S ++ L L +N+++G P N +DSS + L L+L N N T LQ R L TLDLS N LTG++ D +A
Sbjct: 121 LATLYYATGGPQWKDTTGWLS-SASECTWYGQTPRIDTHAPNSALCDLSDNV-----------------RYLVLNNHNLIGTLPPELALLREIREWRLSGNDLQG-PAPRLATWSFVQLLDLSDNQLTGPLPLPQDNASDSSLFGA-----------SLTELVLNDNLFNDT----LQEFNLTRVSQLSTLDLSRNLLTGALPDTMA 293
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YZ34_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.770e-8 Identity = 36/99 (36.36%), Postives = 49/99 (49.49%), Query Frame = 1
Query: 157 LYYATNGQAWANSTGWSDDSLGVCSWYGVTCDSEGGNVTGISLSNNLLVGDVSEATDLTNVISLEEMDLSDNQLSGPVPLNLGMMPNMEILDLSGNELS 453
LYY TNG W NST W D L C W+GV CD N+ + E+DLSDN ++GP+P LG + +++ L++S N LS
Sbjct: 271 LYYTTNGTFWTNSTDWMDSDLSECEWHGVVCD-----------GNSFI----------------REIDLSDNNITGPIPYELGSLSSLKFLNMSFNLLS 342 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1091.795.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1091.795.1 >prot_Ecto-sp9_F_contig1091.795.1 ID=prot_Ecto-sp9_F_contig1091.795.1|Name=mRNA_Ecto-sp9_F_contig1091.795.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=917bp MTPFPLCHMLFLPWPSGLVRALWAAVATAGYLCPTAFASAYTEEVQIAGLback to top mRNA from alignment at Ecto-sp9_F_contig1091:18001..26183+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1091.795.1 ID=mRNA_Ecto-sp9_F_contig1091.795.1|Name=mRNA_Ecto-sp9_F_contig1091.795.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=8183bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1091:18001..26183+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1091:18001..26183+ >mRNA_Ecto-sp9_F_contig1091.795.1 ID=mRNA_Ecto-sp9_F_contig1091.795.1|Name=mRNA_Ecto-sp9_F_contig1091.795.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=5502bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1091:18001..26183+ (Ectocarpus species9 EcSCA_722f female)back to top |