mRNA_Ecto-sp9_F_contig109.784.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig109.784.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G610_ECTSI) HSP 1 Score: 827 bits (2137), Expect = 5.830e-298 Identity = 393/405 (97.04%), Postives = 396/405 (97.78%), Query Frame = 1
Query: 151 MMRTVGRGFALSVALLAIWSMGAIPRYQARLDGTETGKRARERELGDDEDAIAFNKHDCPYAIHNAKVARKQRHDSTIEGNVVKVKHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCSNDILWENRGAMQMAGLDNPELSKYLPHIRDCMAKAPRLLGCEASYYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRCI 1365
MM TVG GFALSVALLA WSMGAIPRYQARLDGTETGKRARERELGDDEDAIAFNKHDC YAI NAKVARKQRHDSTIEGNVVKV HLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRC DI+WENRGAMQMAGLDNPE +KYLPHIRDCMAKAPRLLGCEA+YYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRCI
Sbjct: 1 MMGTVGHGFALSVALLANWSMGAIPRYQARLDGTETGKRARERELGDDEDAIAFNKHDCTYAIPNAKVARKQRHDSTIEGNVVKVTHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCPIDIIWENRGAMQMAGLDNPERNKYLPHIRDCMAKAPRLLGCEAAYYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRCI 405
BLAST of mRNA_Ecto-sp9_F_contig109.784.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2F3_9PHAE) HSP 1 Score: 378 bits (971), Expect = 6.850e-120 Identity = 193/433 (44.57%), Postives = 241/433 (55.66%), Query Frame = 1
Query: 325 CPYAIHNAKVARKQRHDSTIEGNVVKVKHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCSNDILWENRGAMQMAGLDNPELSKYLPHIRDCMAKAPRLLGCEASYYFPQDIAVCPRKKKPFLALGDRNPPGGA---------------------------------------------------------------------------------------GNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1362
CPY I A+ A + D ++ GNVVKV+HL F RTGN F + +RNLALGYCCK+K VWLPPKDDVLAPG+FN+GTPGPRWFDFSSAPDVDG D CS DI W + A M LD+PE + P +++C+A+APRLL CEA+YYFP+D+ +C GNLVLHVRSGDIF D+V+ Y GQPPLQFYL ++Q WD +D+VTN Q D +NPV+PAL AM G LPD+V+ HT R+M EDL SM CAD L LA+S+LV+ +HS A RVY P +CN ++LA +RP+ + YG+ D +G Y VY+ WENTPEQR EML Y+ F +C
Sbjct: 94 CPYVIDTAEEAISRIKDKSLPGNVVKVEHLTFCRTGNHFSSFFRNLALGYCCKSKVVWLPPKDDVLAPGVFNQGTPGPRWFDFSSAPDVDGFDSSACSADITWAGQRAFHMHQLDSPEHEFHTPGLKECIARAPRLLACEAAYYFPKDVDLCHATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGNLVLHVRSGDIFSDKVLAYYGQPPLQFYLQVIQHADWDSVDIVTNSQEHDGLNPVIPALQAMVDAGDLPDSVHVHTNRTMEEDLLSMFCADGLALARSTLVSLTGFHSKAKRVYGPHQCNAQFKQLALIRPEVQAYGI--DWAGEYGVYKSWENTPEQREEMLAYDKIVGFNQC 524
BLAST of mRNA_Ecto-sp9_F_contig109.784.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2M2_ECTSI) HSP 1 Score: 313 bits (803), Expect = 3.930e-95 Identity = 173/394 (43.91%), Postives = 224/394 (56.85%), Query Frame = 1
Query: 304 IAFNKHDCPYAIHNAKVARKQRHDSTIEGNVVKVKHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCSNDILWENRGAMQMAGLDNPELSKYLPHIRDCMAKAPRLLGCEASYYFPQDIAVCPRKKKPFLALGD------------RNPPG--------------GAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQN--WDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADS-LGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKT------------KVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1362
AFN DCPY + + R D I GNV+ + +FGR GNRF A+ NL LGYCCK+K V LP KDD LAPGIF EGTPGPRW+DF++APDV+G D C DI W R A + GLDNP Y P++ C+ PRL GCEA+Y+FP + VC + A GD R+ PG A LV+HVRSGDIF D P GQPPLQ+Y+ ++ Q WDR+D+VTNG+ + +NPV+PAL M A G L N+YFH +R+M ED SM+C L A+SSL L++HS+A+R+Y+P C L R P KVYG++ YS+ W NT +Q EML +NV++ F++C
Sbjct: 118 FAFNP-DCPYILRTPGERLRMR-DPAIPGNVLTINDFRFGRLGNRFWALGVNLKLGYCCKSKLVSLPAKDDTLAPGIFGEGTPGPRWYDFTNAPDVEGFDASSCPADITWGGREAFHLLGLDNPSHPYYSPNLSTCVETVPRLTGCEAAYFFPMGVDVCLSDR---TATGDVVHEQRGNGASGRSGPGVKKNLVGSEEEEGRPANTLVIHVRSGDIFVDPAAPGYGQPPLQYYVRAIKHQKWDRVDIVTNGRTKKMNVMNPVIPALEVMFAEGELTGNIYFHKDRTMEEDFLSMMCVGGGLVTARSSLSLLLAHHSSASRLYFPRPCAGSLEFYTRGSPDASLNDLDDELQAVKVYGVKPPGMERYSLDVSWNNTADQVNEMLTFNVSS-FEQC 505
BLAST of mRNA_Ecto-sp9_F_contig109.784.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7B3_9PHAE) HSP 1 Score: 313 bits (802), Expect = 1.150e-94 Identity = 169/395 (42.78%), Postives = 235/395 (59.49%), Query Frame = 1
Query: 325 CPYAIHNAKVARKQRHDSTIEGNVVKVKHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCSNDILWENRGAMQMAGLDNPELSKYLPHIRDCMAKAPRLLGCEASYYFPQDIAV--CP---------------------RKKKPFLAL--GDRNP----------------------PGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNG--QNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1362
CPYAI + + AR++ +++ GNVV V + R GNRF ++ R+L+LGYCCK++ + LPPKD+ LAPG FNEG PGPR FDFSSAPDV+G D C +I W A + GL + Y P + +C+ + PR+ GCEA+Y+FP+D+AV CP R P + L G+R G AGNLV+HVRSGDIF R P GQPPLQ+Y+ +QDQ WDR+DVVT+G +NPVVPAL A A G L N++FH R++GEDL+ M+CAD A+S+L + +S+HS+A R+Y+P CN L+ L+ RP T+V+G+ + Y+VY+ W NT +Q EM+ ++V F++C
Sbjct: 147 CPYAIPSEEEARERSGNTSAPGNVVVVTDFNYCRLGNRFTSMSRSLSLGYCCKSRLLSLPPKDEQLAPGRFNEGIPGPRNFDFSSAPDVEGFDYSSCPPEITWGGTNAFHLQGLRDEGHPYYTPELFECIKELPRIAGCEAAYFFPKDMAVDMCPLDETAERDHNNSNVRDVSEKPRDDAPGVRLDWGERGQGREATXXXXXXXXXXXXXXXXXEGSAGNLVVHVRSGDIFV-RPHPDYGQPPLQYYVRAIQDQEWDRVDVVTDGIVDETHAINPVVPALEAKVAEGELAGNIHFHKNRTIGEDLRYMICADGFVAARSTLRHVVSHHSSAKRMYFPMACNEKLKTLSTERPGTQVFGM-ASWNDQYTVYQRWNNTADQLTEMMTFDVGG-FEQC 538
BLAST of mRNA_Ecto-sp9_F_contig109.784.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L4_ECTSI) HSP 1 Score: 287 bits (734), Expect = 9.180e-85 Identity = 164/398 (41.21%), Postives = 223/398 (56.03%), Query Frame = 1
Query: 325 CPYAIHNAKVARKQRHD----------STIEGNVVKVKHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVDLGRCSNDILWENRGAMQMAGLDNPELSKYLPHIRDCMAKAPRLLGCEASYYFPQDIAV--CP-------------------RKKKPFLALG-------------------DRNPPGGAGNLVLHVRSGDIFFDRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDN--VNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQLDRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1362
CPYAI +A ++ H+ ++ GNVV V + R GNRF+++ R+L+LGYCCK++ V LPPKDD LAPG FN+GTPGPR FDFSSAPDV+G D C +I W A + GL + Y P + C+ + P ++GCEA+Y+FP D+AV CP + P + L G AGNLV+HVRSGDIF P GQ +Y+ +QDQ WDR+DVVTNG N +NP+VPAL A A G LP N++FH R+M EDL SM+CAD A+S+L +S+ S+A R+Y+P CN +L+ L P T+V+G+ Y+V+R W NT +Q AEM+ +V F++C
Sbjct: 146 CPYAI----LAEEEGHERSDRGGDGGNTSAPGNVVVVTDFNYCRLGNRFLSMGRSLSLGYCCKSRLVSLPPKDDQLAPGRFNDGTPGPRNFDFSSAPDVEGFDSSSCPPEIKWGGTQAFHLEGLRDEGHPYYTPGLFTCIKELPWIIGCEAAYFFPTDMAVPMCPLDETAEGGNKNVRDISEKPKDDAPGIQLDWEESGHGREATEQXXXXXXXXXXXGSAGNLVMHVRSGDIFVSPAHPGYGQ----YYVQAIQDQQWDRVDVVTNGIEDKNHAINPIVPALEAKVAKGQLPGNIHFHKNRTMEEDLLSMICADGFVAARSTLGRVVSHLSSAKRMYFPTSCNEELKNLGTEGPGTQVFGM-ASWDHEYTVFRRWNNTADQIAEMMTADVGG-FEQC 533
BLAST of mRNA_Ecto-sp9_F_contig109.784.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7B0_9PHAE) HSP 1 Score: 159 bits (402), Expect = 7.970e-39 Identity = 119/393 (30.28%), Postives = 191/393 (48.60%), Query Frame = 1
Query: 325 CPYAIH--NAKVARKQRHDSTIEGNVVKVKHLQ-FGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVL----------APGIFN-----EGTPGPRWFDFSSAPDVDGVD--LGRCSNDILWENRGAMQMAGLDNPELSKYLPHIRDCMAKAPRLLGCEASYYFPQDIA---VCPRKKKPF---------LALGDRNP--PGGAGNLVLHVRSGDIFFDRVVPYK-GQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRC---------NH--DLRELARLRPKTKVYGLQL-DRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1362
CP AI A + R R G V+ + ++ GR+GN +MA+ ++ +CC+ K + LP D L + +F+ P++ + S D +G+ L C ++ L + A + GL PH++ CM ++ GCEA+Y + + CP ++ L G +P GAG+LV+HVRSGDIF + ++ GQPPL +YL ++ +PW+++ VT+G++ D +NP + + + G L NV H +R + EDLQ+MLCADSL L+ S+ N L HS A R + PW C NH + + R + +VYG++ S +Y+VY W+ + EM+ + QRC
Sbjct: 48 CPQAISPDEADIRRSTR---GWPGGVLTLSSIERIGRSGNHYMAISTLFSMAFCCQVKVLELPDMDWRLPTESGERFKSSTNLFSFSQRHTNRAPPQYINGSLPTDFEGLQGRLDVCPHERLIDGTHANHIRGLH--------PHLQKCMRNV-KMRGCEAAY-LKESLGGEHACPSPQRQLAEREDESAQLVAGTTSPLERRGAGSLVVHVRSGDIFKPGTIYHQYGQPPLLYYLAVIASKPWNKMSFVTSGED-DLLNPAYRVIEGINSQGLLGTNVEMHKDRPLWEDLQAMLCADSLALSHSTFTNLLLAHSRAKRFFLPWGCEPQVGDTTLNHFANATMICLQRSEVEVYGIEWRTTSEAYTVYDSWDPS-SNLLEMVVSDSVKGMQRC 425
BLAST of mRNA_Ecto-sp9_F_contig109.784.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV9_ECTSI) HSP 1 Score: 156 bits (394), Expect = 1.620e-37 Identity = 124/385 (32.21%), Postives = 179/385 (46.49%), Query Frame = 1
Query: 301 AIAFNKHDCPYAIHNAKVARKQRHDSTIEGNVVKVKHLQFGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEG--TPGPRWFDFSSA-PDVDGVDLGRCSNDILWENRGAMQMAGLDNPELSKYLPHIRD----CMAKAPRLLGCEASYYFPQ-DI-AVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYK----GQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSY-HSTANRVYYPWRC-NHDLRELARL---------------RPKTKVYGLQLD-RSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1362
A F CP A+ ++ A N + + GR+GN F+ + LA+G+CC+++ + LP D + PG G G RWFDFS P G + L +N + D + + HI CM + L GCE +Y D+ CP K++P G R GAG+LV+H+RSGDIF + GQPPLQ+YL ++ ++ WD + +T N +NP L M G L DNV RS+ ED++ MLCAD+L ++SS+ +FL++ HS A + P C N R + R +P +VYG S YSVY+ W +TPEQ EM + Q+C
Sbjct: 81 ANLFQSAGCPQALSRSQ-AEAALDGGNSTSNTITLLSFGSGRSGNHFLMISSYLAMGFCCRSRLLTLPEVDTAM-PGDDEGGGFKAGERWFDFSRVTPPWPGFEQ-------LGDNPEVCRPQMEDGADNAFGYEHIHSRLLRCMNRV-YLRGCEKAYLGKMVDLEGFCP-KQEP----GKRK---GAGSLVVHIRSGDIFNPNEEGRRRTEFGQPPLQYYLHVLGEKDWDNVTFLTAAWNQKAINPTFSILEVMAKAGTLGDNVRLLKNRSLLEDVREMLCADALATSRSSM-SFLTFAHSRATTFFVPTPCGNGGFRRMRRPPVKATFDNTTLLLLEKPDAEVYGTAWPGNSPKYSVYQAWHDTPEQLLEMATFGGIEGVQKC 446
BLAST of mRNA_Ecto-sp9_F_contig109.784.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM4_9PHAE) HSP 1 Score: 147 bits (372), Expect = 9.790e-35 Identity = 121/392 (30.87%), Postives = 173/392 (44.13%), Query Frame = 1
Query: 325 CPYAI-HNAKVARKQRHDSTIEGNVVKVKHLQ-FGRTGNRFMAVYRNLALGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSAPDVDGVD------------------LGRCSNDILWENRGAMQMAGLDNPELSKYLPHIRDCMAKAPRLLGCEASYYFPQ--DIAVCPRKKKPFLALGDRNP---PG----------GAGNLVLHVRSGDIFF-DRVVPYKGQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLR---------PKTKVYGLQL-DRSGSYSVYRHWENTPEQRAEMLGYNVTTTFQRC 1362
CP AI H+ +AR D + G V+ V L+ GR+GN +MA+ +L +CC K + LP D E F FSS DGV+ +G C + + A + GL +L + + H+ + GCEA+Y D + CP P G+ PG G G+LV+H+RS DIF D GQPPL ++L ++ + WD + V+T+G + +NP + + G L NV H +RS EDLQ+MLCADSL L+ S+L N L HS A R + PW C L R + +VYG+ S +Y+VY W+ EM+ + QRC
Sbjct: 54 CPQAISHDEALARTS--DPSWPGGVLNVTSLETVGRSGNHYMAISTMFSLAFCCGVKVLELPDTDYRFPTEEGGEFKSSKHLFSFSSHG-TDGVEAERQTWSQLTGLEDLQGRVGVCPKKRIVDGTHANHITGLGK-DLQRCIRHVH--------MRGCEAAYLQQVIGDESSCPDSPPPVGTDGEPTGLVVPGTTGLLPSETKGDGHLVVHIRSQDIFKPDTRYHQYGQPPLGYFLAVIASKKWDYLSVLTSGPD-KQLNPTYSVIAELNRQGFLGTNVEMHKDRSFWEDLQAMLCADSLALSHSTLSNLLLAHSRAKRFFLPWGCEPQPWTLKLNRFVNASMICLQRPEVYGIDWRTTSDAYTVYDSWDPNSNMM-EMVVSDAVKGVQRC 431
BLAST of mRNA_Ecto-sp9_F_contig109.784.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV8_ECTSI) HSP 1 Score: 134 bits (338), Expect = 4.960e-31 Identity = 103/326 (31.60%), Postives = 164/326 (50.31%), Query Frame = 1
Query: 466 LGYCCKAKQVWLPPKDDVLAPGIFNEGTPGPRWFDFSSA--PDVDGVDLGRCSNDILWENR-GAMQMAGLDNPELSKYLPHIRDCMAKAPRLLGCEASYYFPQ-DI-AVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYK----GQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSY-HSTANRVYYPWRC-NHDLRELARLRPK---------------TKVYGLQLDRSGS-YSVYRHWENTPEQRAEMLGYNVTTTFQRC 1362
+G+CC+++ + LP DD L P + T RWFDFS+ P + ++G E + G + G ++ P + +CM + L GCE +Y D+ + CP K++P G R GAG+LV H+RSGDIF ++ GQPPLQ+YL ++ + WD + +T +NP L M G L +NV+ R++ D++ MLCAD+L ++SS+ +FL++ HS A + P C N R + + K ++V+G+ ++GS YSVY++W ++P Q EM Y Q+C
Sbjct: 1 MGFCCRSRLLTLPATDDKL-PDELDNFTSARRWFDFSNVTVPWPEYQEMGDDQEVCRPETKDGGRKAFGYEDVH-----PKLLECMNRV-YLRGCEKAYLGKLVDVGSFCP-KQEP----GKRK---GAGSLVAHIRSGDIFNPDGEGHRRQGFGQPPLQYYLRVLAAKDWDNVTFLTAAWEDRALNPTFLTLEMMADAGVLGENVHLFNNRTLLTDMKEMLCADALATSRSSM-SFLTFAHSRATTFFVPTPCGNGGFRRMKDVPVKATFDNTTLLLLEKRESEVFGVDWRQNGSDYSVYKNWLDSPHQLLEMTTYKGIKGLQKC 310
BLAST of mRNA_Ecto-sp9_F_contig109.784.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectothiorhodospiraceae bacterium BW-2 TaxID=947515 RepID=A0A5C2HP59_9GAMM) HSP 1 Score: 73.9 bits (180), Expect = 3.030e-10 Identity = 58/207 (28.02%), Postives = 91/207 (43.96%), Query Frame = 1
Query: 751 YYFPQDIAVCPRKKKPFLALGDRNPPGGAGNLVLHVRSGDIFFDRVVPYK-GQPPLQFYLLLMQDQPWDRIDVVTNGQNWDNVNPVVPALMAMRATGALPDNVYFHTERSMGEDLQSMLCADSLGLAKSSLVNFLSYHSTANRVYYPWRCNHDLRELARLRPKTKVYGLQL---------DRSGSY--SVYRHWENTPEQRAEMLGY 1335
Y Q + C + P L N L +H+R+GDIF D + GQPPL FY+ ++Q + W + +V D NPVV AL LP Y ++ +D+ + A+ L + + + L S + Y ++ + KT V+GL+ D +G+Y ++ +W NTPEQR +ML Y
Sbjct: 210 YDILQQLRPCLAYELPEQPLHPHN------TLTIHLRAGDIFSDNTPHFGYGQPPLAFYIAVLQQRRWHAVQLVYE----DEGNPVVAALKTELDNRKLP---YSIASGTLADDIAILAAAEHLVIGRGTFTYPLICLSKVVKTVYYFQID-----------KTAVWGLERSDIKFVLIQDINGNYQQTILANWRNTPEQRQQMLTY 392 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig109.784.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig109.784.1 >prot_Ecto-sp9_F_contig109.784.1 ID=prot_Ecto-sp9_F_contig109.784.1|Name=mRNA_Ecto-sp9_F_contig109.784.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=456bp MYCRSSRSKQAKSTSFYPACVYQERRPCSSFAENCRLLASYPALSTIPLHback to top mRNA from alignment at Ecto-sp9_F_contig109:48668..55231- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig109.784.1 ID=mRNA_Ecto-sp9_F_contig109.784.1|Name=mRNA_Ecto-sp9_F_contig109.784.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=6564bp|location=Sequence derived from alignment at Ecto-sp9_F_contig109:48668..55231- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig109:48668..55231- >mRNA_Ecto-sp9_F_contig109.784.1 ID=mRNA_Ecto-sp9_F_contig109.784.1|Name=mRNA_Ecto-sp9_F_contig109.784.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2736bp|location=Sequence derived from alignment at Ecto-sp9_F_contig109:48668..55231- (Ectocarpus species9 EcSCA_722f female)back to top |