mRNA_Ecto-sp9_F_contig109.779.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp9_F_contig109.779.1
Unique Name	mRNA_Ecto-sp9_F_contig109.779.1
Type	mRNA
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)

Homology

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BLAST of mRNA_Ecto-sp9_F_contig109.779.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP4_ECTSI)

HSP 1 Score: 496 bits (1276), Expect = 7.040e-166
Identity = 240/244 (98.36%), Postives = 242/244 (99.18%), Query Frame = 1

Query:  427 ALTESHVICLNDQNALRDSASQRWEVAGTRVLAGHFLWDLRQYVTPPHLLITMLRDPLELFVSAKQFKHREQTASLEAAADFVASNMRGRLGWEDPSDIGFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVKVLQHTLDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNATLSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSVPGHKSSLS 1158
            A+ ESHVICLNDQNALRDSASQRWEVAGTRVLAGHFLWDLRQYVTPPHLLITMLRDPLELFVSAKQFKHRE+TASLEAAADFVASNMRGRLGWEDPSDIGFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFV VLQHTLDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNATLSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSVPGHKSSLS
Sbjct:  104 AVWESHVICLNDQNALRDSASQRWEVAGTRVLAGHFLWDLRQYVTPPHLLITMLRDPLELFVSAKQFKHREETASLEAAADFVASNMRGRLGWEDPSDIGFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVNVLQHTLDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNATLSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSVPGHKSSLS 347

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BLAST of mRNA_Ecto-sp9_F_contig109.779.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ6_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 1.270e-117
Identity = 176/303 (58.09%), Postives = 227/303 (74.92%), Query Frame = 1

Query:  241 GRSFDSFPSASDATIMFLHVFKCAGTSLREVFMALAEEKGWSRAVVEECTRRRSPRRLGAGPALTESHVICLNDQNALRDSASQRWEVAGTRVLAGHFLWDLRQYVTPPHLLITMLRDPLELFVSAKQFKHREQTASLEAAADFVASNMRGRLGWEDPSDIGFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVKVLQHTLDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNAT-LSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSVPGHK 1146
            G    SFPS S++TI+FLHVFKCAGT+LREV    A+ +G + A+VE C  +            T    ICLN QN L D   ++W VAG+++LAGHFLWD R YVTPP+L++T LR+PLELFVS++QF H+ +T +L+ +  FV  +M+ RLGW DP+D+ F+RRFL ++ ANSYDPQ++Y+ E+ SAM  TA +HL+ F+VVGVVEQY GF++VL+ TLDP+  HP+LW AA  V +NGSPVHS DVL  IDPDLVREFNAT L+ QWQVYDVAL+LWDSRCRE+LP +DH +LCSVP H+
Sbjct:   90 GPELSSFPSVSNSTILFLHVFKCAGTTLREVLTTWAKLEGLNGAIVEYCRSK----------TFTNVGRICLNSQNDLMDPIREKWLVAGSKLLAGHFLWDFRHYVTPPYLMVTTLRNPLELFVSSQQFMHKAETKTLDDSVAFVGQSMKSRLGWADPTDLAFIRRFLDSETANSYDPQVLYSDEEMSAMVQTAVDHLNTFYVVGVVEQYQGFIEVLKRTLDPDESHPKLWAAAVGVLDNGSPVHSGDVLSGIDPDLVREFNATALARQWQVYDVALKLWDSRCREILPPEDHEALCSVPSHR 382

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BLAST of mRNA_Ecto-sp9_F_contig109.779.1 vs.
Match: Similar (to heparin sulfate O-sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE4_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 1.390e-107
Identity = 160/281 (56.94%), Postives = 208/281 (74.02%), Query Frame = 1

Query:  307 CAGTSLREVFMALAEEKGWSRAVVEECTRRRSPRRLGAGPALTESHVICLNDQNALRDSASQRWEVAGTRVLAGHFLWDLRQYVTPPHLLITMLRDPLELFVSAKQFKHREQTASLEAAADFVASNMRGRLGWEDPSDIGFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVKVLQHTLDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNAT-LSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSVPGHK 1146
            CAGT+LREV    A+ +GW+ A+VE C  +            T +  ICLN QN L +   ++W VAG+++LAGHFLWD R YVTPP+L++T LR+PLELFVS++QF H+ +T +L+ +  FV  +MR RL W DP+D+ F+RRFL +  ANSYDPQ++Y+ E+ SAM  TA +HL+ F+VVGVVEQY GF++VL+ TLDP+  HP+LW AA  V +NGSPVHS DVL  IDPDLVREFNAT L  QWQVYDVAL+LWD RCRE+LP ++H +LCSVP H+
Sbjct:    2 CAGTTLREVLTTWAKLEGWNGAIVEYCRSK----------TFTNAGRICLNSQNDLMNPIREKWLVAGSKLLAGHFLWDFRHYVTPPYLMVTTLRNPLELFVSSQQFMHKAETKTLDDSVAFVGQSMRSRLKWADPTDLAFIRRFLDSKTANSYDPQVMYSDEEMSAMVQTAVDHLNTFYVVGVVEQYQGFIEVLKRTLDPDESHPKLWAAAVGVKDNGSPVHSGDVLSGIDPDLVREFNATTLGRQWQVYDVALKLWDRRCREILPAEEHEALCSVPYHR 272

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BLAST of mRNA_Ecto-sp9_F_contig109.779.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF0_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 6.670e-97
Identity = 165/313 (52.72%), Postives = 208/313 (66.45%), Query Frame = 1

Query:  223 APPAALGRSFDSFPSASDATIMFLHVFKCAGTSLREVFMALAEEKGWSRAVVEECTRRRSPRRLGAGPALTESHVICL-NDQNALRDSASQRWEVAGTRVLAGHFLWDLRQYVTPPHLLITMLRDPLELFVSAKQFKHREQTASLEAAADFVASNMRGRLGWEDPSDIGFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVKVLQHTLDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNAT-LSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSVPGHKSSL 1155
            AP  A  R   SF S + +T +FLHVFKCAGTSLREVFMA A+  GW+ AV+  C++ +   +    P      VIC+ ++ +  +D    RW V+GT+VLAGHF WD R    PP+L++T LR+PLELFVSA QFKHR++T +L  A  FV S MR  LG E    +GF+R FL    A  Y+P+ VYT  ++ AMA+ + EHL+ F VVGVVEQY GF++VL+HTLDP LE+P +W   + V NN SPV SRDVL  +DP LVR +N T L  QW+VY+VALQLWDSRCREVLP  DH   C VP H   L
Sbjct:   72 APLVANARELASFSSPAISTTLFLHVFKCAGTSLREVFMAFAKTNGWTGAVIAGCSKTQKEFQFHDPPG----SVICVRHEDHRPKDENIGRWLVSGTKVLAGHFFWDFRLMAAPPYLMVTTLRNPLELFVSALQFKHRDETRTLAGATRFVTSQMRTILGLEGLGQLGFIRVFLNDTGAVGYNPRGVYTHNETWAMATESVEHLNTFLVVGVVEQYEGFIEVLKHTLDPGLENPSVWTTGANVQNNKSPVPSRDVLRNMDPYLVRLYNETRLDLQWKVYEVALQLWDSRCREVLPPSDHERYCDVPRHADIL 380

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BLAST of mRNA_Ecto-sp9_F_contig109.779.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ87_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 4.900e-84
Identity = 142/275 (51.64%), Postives = 183/275 (66.55%), Query Frame = 1

Query:  337 MALAEEKGWSRAVVEECTRRRSPRRLGAGPALTESHVICL-NDQNALRDSASQRWEVAGTRVLAGHFLWDLRQYVTPPHLLITMLRDPLELFVSAKQFKHREQTASLEAAADFVASNMRGRLGWEDPSDIGFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVKVLQHTLDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNAT-LSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSVPGHKSSL 1155
            MA A+  GW+ AV+  C++R+   +    P      +IC+ ++ +  +D    +W V+GT+VLAGHF WD R    PP+L++T LR+PLELFVSA QFKHR++T +L  A  FV S MR  LG E    +GF+R FL    A  Y+P+ VYT  ++ AMA+ + EHL+ F VVGVVEQY GFV+VL+HTLDP LE+P +W   ++V NN SPV SRDVL  IDP LVR +N T L  QW+VY+VALQLWDSRCREVLP  DH   C VP H   L
Sbjct:    1 MAFAKTNGWTGAVIAGCSKRQKEFQFHDPPG----SIICVRHEDHRPKDDNIGKWLVSGTKVLAGHFFWDFRLMAAPPYLMVTTLRNPLELFVSALQFKHRDETRTLAGATRFVTSQMRTILGLEGLGQLGFIRVFLNDTGAVGYNPRGVYTHNETWAMAAESVEHLNTFLVVGVVEQYEGFVEVLKHTLDPGLENPSVWTTGAKVQNNKSPVSSRDVLRNIDPYLVRLYNETRLDLQWKVYEVALQLWDSRCREVLPRSDHERYCDVPRHADIL 271

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BLAST of mRNA_Ecto-sp9_F_contig109.779.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP3_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 1.100e-77
Identity = 137/150 (91.33%), Postives = 140/150 (93.33%), Query Frame = 1

Query:    1 MGQEAKITGALSLLVLLVLLVCYSRVDLFATASSGHLRTSDAPRVSSREAYGRRDGEPGWQRAAEEKEGLAAARAPPAALGRSFDSFPSASDATIMFLHVFKCAGTSLREVFMALAEEKGWSRAVVEECTRRRSPRRLGAGPALTESHVI 450
            MGQEAKITGALSLLVLLVLLVCYSRVDLFATASSGHLRTSD PRVSS EAYGR DG+ GWQRAAEEKEGLAAARAPPA LGRS DSFPSASDATIMFLHVFKCAGTSLREVFMALAEEKGWS AVVEECTRRRSPRRLGAGPALT   ++
Sbjct:    1 MGQEAKITGALSLLVLLVLLVCYSRVDLFATASSGHLRTSDDPRVSSTEAYGRGDGDSGWQRAAEEKEGLAAARAPPAVLGRSLDSFPSASDATIMFLHVFKCAGTSLREVFMALAEEKGWSHAVVEECTRRRSPRRLGAGPALTVRQLL 150

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BLAST of mRNA_Ecto-sp9_F_contig109.779.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ5_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 8.580e-65
Identity = 128/309 (41.42%), Postives = 181/309 (58.58%), Query Frame = 1

Query:  259 FPSASDATIMFLHVFKCAGTSLREVFMALAEEKGWSRAVVEECTRRRSPRRLGAGPALTESHVICLNDQNALRDSASQRWEVAGTRVLAGHFLWDLRQYVTPPHLLITMLRDPLELFVSAKQFKHREQTASLEAAADFVASNMRGRL----------------GWEDPSDIG-FVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVKVLQHTLDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNATLSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSV 1134
            FP+  ++T+MFLHVFKCAG++LR + +A AE +    A+V  C               +E+  ICL     L D   Q   ++  +VLAGHFLW  ++++  P+L++T LR+PLE++VSA+Q+ H+ +T +LE A  FV+  MR  L                G + P  IG FV R +G +    Y  +L           + A E+L  FW+VG+VEQYAGFV+VL+  LDPE +H  +W+  S    N SP+ SRDVL  +DP LVREFN +L+ QW+VY+ A+ LWD RCREVLP+  H  LC+V
Sbjct:   33 FPALEESTVMFLHVFKCAGSTLRRMLVAWAEAEDELGAIVHRCNYT------------SEAREICLAHFK-LVDEPVQLELLSRQKVLAGHFLWGFQRHLRRPYLMVTALRNPLEVYVSAQQYTHKRKTKTLEKAQAFVSKAMRKTLRQYGDGPALGEEEMPFGGKSPQQIGGFVFRLVGINKKQLYGEKL-------EVAVTKAIENLETFWLVGLVEQYAGFVEVLELLLDPERKHVDVWQTYSTRQFNTSPLRSRDVLAALDPQLVREFNGSLALQWRVYEKAVALWDLRCREVLPVAKHEELCTV 321

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BLAST of mRNA_Ecto-sp9_F_contig109.779.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ3_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 9.960e-62
Identity = 126/324 (38.89%), Postives = 182/324 (56.17%), Query Frame = 1

Query:  253 DSFPSASDATIMFLHVFKCAGTSLREVFMALAEEKGWSRAVVEECTRRRSPRRLGAGPALTESHVICLNDQNALRDSASQRWEVAGTRVLAGHFLWDLRQYVTPPHLLITMLRDPLELFVSAKQFKHREQTASLEAAAD-----FVASNMRGRLGWEDPSDI-------------------------GFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVKVLQHTLDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNATLSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSV 1134
            D FP   D+T+MFLHVFKCAG++LR++F+  A+ +G S A+V  C              + +  VICL     +++S   +  +   ++LAGHF+W  ++ V  P L++T LR+PLE FVS +QF H + T +LE A+      FV+  M   LG + P  +                         GF+ R +G + A       +      S  A  A ++L  FWVVGVVEQYAG   VL+  LDP+L+HP LW+  S  ++N SPV SR VL  IDP LVR+FN +L+ QW+VY+ A++LW +RCREVLP+  H ++C+V
Sbjct:  144 DRFPPLEDSTVMFLHVFKCAGSTLRQMFVDWAKAEGASGAIVTSCDE------------VQKEGVICLAKHELIKESVQMKM-LLKQKILAGHFIWGFQRLVEKPFLMVTSLRNPLEAFVSGRQFLHPDMTETLEQASAAHAQAFVSYAMLNALGIDGPGHVAMLGERASLGHALLRGRRQSPDQLGGFIFRLVGQENAKKLHGLAL------SRAADEAMKNLEAFWVVGVVEQYAGLQAVLKRLLDPDLKHPALWDKYSYRHSNRSPVDSRYVLAAIDPSLVRQFNDSLALQWKVYEKAVELWGTRCREVLPITVHDAMCTV 448

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BLAST of mRNA_Ecto-sp9_F_contig109.779.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAP0_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 1.180e-46
Identity = 114/308 (37.01%), Postives = 155/308 (50.32%), Query Frame = 1

Query:  274 DATIMFLHVFKCAGTSLREVFMALAEEKGWSRAVVEECTRRRSPRRLGAGPALTESHVICLNDQNALRDSASQRWEVAGTRVLAGHFLWD-------------------LRQYVTPPHLLITMLRDPLELFVSAKQFKHREQTASLEAAADFVASNMRGRLGWEDPSDI-GFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVKVLQHTLDPELEHPRLWEAASEVNN-NGSPVHSRDVLDRIDPDLVREFNATLSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSV 1134
            D T+MFLHV+KC GT+LR +    A  +G   A V  C           G    +   +CL +   +       + +A  +VLAGHF W                     + Y   PH L+T LR+PLELFVS +Q+ +R  TA+L  A   V   MR  L  E P+   G++ R +G           V T  +        A +L  FW+VGVVEQY GFV VL+  LDP+  H  LW    E +  N SPV S +VL  +DP LV++FN+TLS+QW +Y  A++L+ +RC+EVLP   H   CSV
Sbjct:   60 DGTLMFLHVWKCGGTTLRRLMCDWANSEGLPCATVAGC-----------GHLSLKERKVCLLNYKLIFPEQQGEF-IARQKVLAGHFRWGESRVTSACHTVTRTLFASGFQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSKAVQVVERAMRKSL--ETPTQPPGYLHRLVGRS---------VVTNAEIREATVEGARNLKTFWLVGVVEQYGGFVAVLRALLDPDGLHDDLWRPQLEEHKLNASPVQSSNVLASLDPQLVKQFNSTLSYQWLMYGHAVRLFRARCQEVLPEYQHWEFCSV 344

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BLAST of mRNA_Ecto-sp9_F_contig109.779.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7G7_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 1.140e-41
Identity = 104/302 (34.44%), Postives = 159/302 (52.65%), Query Frame = 1

Query:  280 TIMFLHVFKCAGTSLREVFMALAEEKGWSRAVVEECTRRRSPRRLGAGPALTESHVICLNDQNALRDSASQRWEVAGTR---VLAGHFLWDLRQYVTPPHLLITMLRDPLELFVSAKQFKHREQTASLEAAADFVASN---------MRGRL----GWEDPSDIGFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVKVLQHTLDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNATLSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSVP 1137
            T++F+H++KCAG+SLR +    AE K     +V  CT             ++++  ICL   + +    ++R++    R   V+AGHF W  + +V  P+++ T LR+PLELFVS +Q+ +R+ +     A   V            +RG +    G  +   +GF+ R +    ANS    LV  K  S+  A  A ++L  FW+VGV+EQY GF+ VLQ  +DP      +W+  +    N SP  +  VL  IDP LV+EFN TLS QW+VY  A+ L+  RC ++L  +D   +C VP
Sbjct:   55 TLLFMHLWKCAGSSLRHLLRDWAEAKEQDIGIVVRCT-----------DVVSKTGKICLKHHSLI----NERFQAPFIRLHQVVAGHFTWGFQNHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTILRAIKQHQLRGDVMVPEGMGNTKSVGFIYRLVDPVQANSTQEGLVGGKTLSAG-AQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWEVYSYAVDLYKHRCHQMLHTRD-LDMCEVP 339

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig109.779.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig109.779.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 15


Match Name	E-value	Identity	Description
Uncharacterized	7.040e-166	98.36	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	1.270e-117	58.09	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Similar	1.390e-107	56.94	to heparin sulfate O-sulfotransferase n=1 Tax=Ecto...	[more]
Uncharacterized	6.670e-97	52.72	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	4.900e-84	51.64	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	1.100e-77	91.33	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	8.580e-65	41.42	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	9.960e-62	38.89	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	1.180e-46	37.01	protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5...	[more]
Uncharacterized	1.140e-41	34.44	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig109	contig	Ecto-sp9_F_contig109:6764..12440 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	493.4
Seed ortholog evalue	9.5e-137
Seed eggNOG ortholog	2880.D8LIP4
Preferred name	TMEM256
EggNOG free text desc.	Protein of unknown function (DUF423)
EggNOG OGs	COG2363@1,KOG3472@2759
COG Functional cat.	J
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	signal peptide
Ec32 ortholog description	P-loop containing nucleoside triphosphate hydrolase
Ec32 ortholog	Ec-11_004630.1
Exons	8
Model size	2713
Cds size	1161
Stop	1
Start	1

Relationships

The following CDS feature(s) are a part of this mRNA:

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928311.0270605-UTR-Ecto-sp9_F_contig109:10888..12440	1622928311.0270605-UTR-Ecto-sp9_F_contig109:10888..12440	Ectocarpus species9 EcSCA_722f female	UTR	Ecto-sp9_F_contig109 10889..12440 +
1692277830.8557494-UTR-Ecto-sp9_F_contig109:10888..12440	1692277830.8557494-UTR-Ecto-sp9_F_contig109:10888..12440	Ectocarpus species9 EcSCA_722f female	UTR	Ecto-sp9_F_contig109 10889..12440 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig109.779.1	prot_Ecto-sp9_F_contig109.779.1	Ectocarpus species9 EcSCA_722f female	polypeptide	Ecto-sp9_F_contig109 6764..10888 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp9_F_contig109:6764..12440+
coding sequence from alignment at Ecto-sp9_F_contig109:6764..12440+

protein sequence of mRNA_Ecto-sp9_F_contig109.779.1

>prot_Ecto-sp9_F_contig109.779.1 ID=prot_Ecto-sp9_F_contig109.779.1|Name=mRNA_Ecto-sp9_F_contig109.779.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=387bp
MGQEAKITGALSLLVLLVLLVCYSRVDLFATASSGHLRTSDAPRVSSREA
YGRRDGEPGWQRAAEEKEGLAAARAPPAALGRSFDSFPSASDATIMFLHV
FKCAGTSLREVFMALAEEKGWSRAVVEECTRRRSPRRLGAGPALTESHVI
CLNDQNALRDSASQRWEVAGTRVLAGHFLWDLRQYVTPPHLLITMLRDPL
ELFVSAKQFKHREQTASLEAAADFVASNMRGRLGWEDPSDIGFVRRFLGT
DAANSYDPQLVYTKEQSSAMASTAAEHLSNFWVVGVVEQYAGFVKVLQHT
LDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNATLSFQWQ
VYDVALQLWDSRCREVLPLQDHSSLCSVPGHKSSLS*

mRNA from alignment at Ecto-sp9_F_contig109:6764..12440+

Legend: CDSpolypeptideUTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp9_F_contig109.779.1 ID=mRNA_Ecto-sp9_F_contig109.779.1|Name=mRNA_Ecto-sp9_F_contig109.779.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=5677bp|location=Sequence derived from alignment at Ecto-sp9_F_contig109:6764..12440+ (Ectocarpus species9 EcSCA_722f female)
ATGGGCCAAGAAGCCAAGATCACGGGCGCCCTCTCCCTGTTGGTACTACT
CGTGCTGCTCGTGTGCTACAGCCGAGTGGATCTCTTCGCAACAGCGTCAA
GCGGTCACCTCCGGACGTCGGACGCCCCCCGGGTATCATCACGGGAAGCC
TACGGCCGGCGCGACGGAGAACCGGGATGGCAACGAGCAGCAGAAGAGAA
GGAAGGGTTGGCGGCGGCACGGGCTCCGCCGGCGGCGCTGGGAAGGAGCT
TTGATTCATTCCCCAGCGCGTCTGACGCGACCATCATGTTCCTTCATGTC
TTCAAGGTGATGAACCGCTAGGCCACCGTTTGTCTGTACAGTTCTGCTCG
TGCAGTGTTCCGATACTAGTTGGCTGTGAGCCCCAGGCGTTCATGCACGC
TGGGCGAAATTCACTGGCAACGTTTTCCTGGGCAGATTTTCTTGAGTATT
TCCTGACTTTCCTACAAAATAGTGATGGCGTTGTTCGTTGCCATCTGGAA
CACTGTTCATGGCACCCCCCAGTGCGGGACTTGCCAAATACTTCATGGAA
GCCCACATGCCGCCGGCAAATCGTGAGCATGCCGACTAGCCAAAAGTAAC
TGATAACACCTTGTGGCCGTTCGCCCCCGGGTTGTGGTTCTTCATACATA
CGTGGACGGCGACCCTCATGAAACAGTGCGCCGGGACGAGCCTTCGAGAG
GTGTTCATGGCTCTGGCGGAGGAGAAAGGATGGAGCCGCGCCGTAGTCGA
GGAATGCACTCGACGAAGATCACCACGGCGGCTGGGCGCCGGGCCTGCTC
TGACGGTGAGGCAACTCTTGGGTGTTCTACATAGCTGTGTGCAATATTTC
GTCTCCCGCCCCCCTCCACCTAGGTAATTTTCTGCCTCCTCTCAAGGCGG
TACAGCGGTACATAGGCCGCGGTCATTCGCCTTGGAAAGGAGAGATCGCC
TGCTCTCTCCCGAGCTCACTGTCAAAAAGCGATCGCGGCATGTTGATTGC
CGCTCACGCACGGCAAGGCAAGAGAGCGCTCACGCAAGGAAATACACCGT
ATGTGTTCTTTACGGCGCACCCTATTATATAATAGGTCTTGCAAAGCCTT
CGGCGCTGCCCCATCGTAGCCTTTCCCCACCCCTGCCGCTCCATCACCAG
GAGAGCCACGTCATATGTCTCAACGACCAGAACGCTTTGAGGGACAGCGC
TAGTCAGCGGTGGGAAGTCGCAGGAACCAGGGTCCTGGCGGGCCACTTCT
TGTGGGGTGAGTCCGGGATGTGCGTACCCAAGCTTGCCGCCCCTACGGCG
ATCTCGTCCGGAGGGTGCCCTCGGGGCTACACTTGACCACGTTCGTTTCA
GACCAATGAGCGGGAAGTTAAGACAAGGCGCAAGTACAGACCAGTAGAAA
AGCCCTTTTAATAATCAGACCGTTTGGTGGTGCTGCTTCGCATGCGCTGC
TGCTGTTGCTGCTGTTGCTGCTGCTGATGGGGTCGTCTGCCAGACCTTCG
GCAGTACGTCACCCCGCCGCACCTCCTGATCACCATGCTGAGGGACCCGC
TGGAGTTGTTCGTGTCCGCGAAACAGTTCAAGCACAGGGAGCAGACGGCC
AGTCTGGAAGCCGCCGCGGACTTCGTCGCGAGCAACATGCGGGGTCGCCT
AGGGTAAGACCCCTCTCCAAATCTGAATGGAGCACATGCTTCGCAACACT
CGGTCGGTTGGATGATGGTCAACATTCCTCCCTCTGTTATACACTTCCTT
CGGCTTCTCGAGAAATTCTTTCCAACACTCGGCCGGTCAGATGAGAGTCA
TCACTGCCCCCAACTTCCCTCGTTTCCTGTCGGTGCTTTAGGAATTCCTT
CCATGTCTTGCGGATCCTAATGTCGTTGATGAAAACGCTAATGCTTGCAG
GTGGGAAGACCCTTCGGACATCGGTTTCGTTCGACGGTTTCTGGGCACGG
ACGCCGCGAACAGCTACGACCCTCAGCTTGTGTACACGAAAGAACAGGTG
GGAGGTTCGCCCCTGCTGTCACTCCGCCTTCGACTCCAGCCAGAGCAGCG
GCAGTGGTTCCAAGAGAGCTAACGCAAAACTGTGTCTCTACTTGTACTCT
GTACCAAAGGTATTGCAGTGCATGGGAGCGAGGTGCCAACAATAAACTCG
GCGGCTGACAACCATCGCGTTTCTACAATTTCGAGGTTCGCAATAAATGG
CGAAGAAGGCACGTGATACATACAACACGTCATCAAACATCGTGGGTGGT
TGCTGCTTAAACGAAAGAGCACCAACATGTCCTCTTAGCCGCGCGGCGCG
GCTGCGACATAGCTCCGCCACCGATCACAACACAACTGTTTGCCCGGATG
TTTTGCTCAATGGAAAAACGCACTTCCTTCACAGTTCCGGCACAAACGCT
TTATTTTGCTTGTTTTTATTTTCTTCCCAGTCCTCGGCGATGGCGTCGAC
CGCGGCCGAACACCTCAGCAACTTCTGGGTGGTAGGAGTGGTGGAGCAGT
ACGCTGGTTTCGTTAAAGTTCTCCAGCACACGCTAGATCCGGAGCTAGAG
CACCCCCGACTTTGGGAGGCCGCATCAGAGGTTAACAACAACGGGTAAGC
GCGTTGTCAAGGGGAAGGAAGAAAAACACGCGCCTGCAACGATTTTGAAG
GTGTTCGACGAAGCACGAACGCAAGCGACGAGGGAGGCGGAGTACTCGTG
TGTTTTGCATGCCTTAGCGGTTAGACCGATGACCACGCGCCCTCGAGAGA
GGGGCGGGGGATGAGGTTGGGCTTCGGGTAGAATGTCCTCGTTGCGCGAG
TACTTCGCTTTTCGGGTAAATACAGGCTTCAGGCTTTTTCGGGAAATCGT
GCCATCAGTCGGCACGGTTACACCGCTCGTGTAGATCTCTGTGAGATGTT
CATCATGCGCACGCCACACCCGATGCCTCTCTGTTTTGCACCACCAGGTC
TCCGGTGCACTCCCGCGACGTACTCGACCGCATCGATCCGGACCTGGTGC
GAGAGTTTAACGCTACTCTCAGCTTCCAGTGGCAGGTGCAGTGGATGACG
TGTTTCTGTAGAGCGTGTGCCGTGTTGCACGAAACAGAAACCTCAAACAA
AGCCTTAATCCCCTTGCGTAATATCGATAGGCTAGGGAAAACATATTGAA
GCCACCTTTCGCAAGGTAGGAAGGAACGATTGGCCGGTCCTGTCGGAACA
ATGGTCCATCCTCTGGAGGACGCGTGGTAAATGGTCTAACGGCATGCAAA
ACATGAGTACGCCCCCCCCCCCTCCTTCCCGCCAAGACGGGGTCGGGGAG
ACGGAAGTAAGTGGCCGACTCCGGATGACGTCACCACAGCAAGGGATTTT
CGGCCGTTTTAAGGTTCCGGCCCCAACAACGTTGATCAGGATAACAAAAA
CTCTACAGGAACAACTTATTCGTAGAGCTGAATGTGGGGATACCGGCAGA
ATGTCTGCAGAACAAAATTTACGCAGAGCAGAATGACACCGACACCCCGC
TCCTGCCCCCTGCTTCGCGCCAAAACGCCGAGCTGTGGGTGCCACGGTGG
GAAGCCTGAGGGAGGGATGTGCTGTTCTGACCAGAATTGAACCCTGCTGT
TGGTTTGCCGTCTCCAGTAATGCGCAATTTGGACTTGCCGCGCTTCGGTC
ATTTCTCGGTCATACTTTTTCGAGACGCTGGGACATCCGAAGCGGGGGGC
TCTCATGACGGCGGTGGTTCTTGGTCTGGCCAAAACCTCGTGATGTCTTG
TGGGCAGATCCTCGATTTCGGCGAACTACGGTACATCCCCCACGATTGGG
GTGCCCCGACTGGGAGAAAACGCTGCTTTCGGCATGGTGCCGACTGATGC
TTCTCAGCGGTAGAGATTCCAATGAGCTGGTGGAGCAAATTCTCTCATTT
ACGTCAACTTTTCAAATCGCGTGCGCGTCGTGTTGCGCCGATCACAAAGA
ACGCTTATATTGGCCAAACCGTCGTGCATCCCTTTAACTCCTGCTCCTAC
GAAACCAATGACAGGTATACGACGTAGCCTTGCAGCTTTGGGACTCGAGA
TGCCGTGAGGTGCTACCTCTCCAAGATCACAGCAGCCTTTGCTCGGTTCC
CGGCCACAAGTCGAGCCTTTCGTGAGGCATCTATCTCAGTTTGGCTTCTT
TTTGCGAAGGTATTTGGGTGCGGTGCAAAGAGCCTCGAGCTTTGATTCGG
CGGGTTTTTTCGATGCGATAGTGTTTGTGGCCGCCCCCTCCGTGGGGGGG
GCACTTTCTGGCCCAGCGCCACAACAAATTTTGGCACTCGCCACATGTAC
AGTATGTAGGAATACGCGTTGTTGTCCTTTCCGTATGATGATGTGGTTCA
TAGCCTTCGCTATTGGTGACAGTTCGTGGAGAAGGGGCAAGTGAAAGCCT
TTCCACCCTCTCACCCTGTCCAGTCTAGTGACAATTCGTGTAGAAGGGGG
AAGTGAAAGCCTTCCCACCCTCTCACCCTGTCCAGTCTAGTGTTTAATAG
TTCAGCTGTCTCAATTTGCCTGTCTGACGTGTACATTTTGCCAAGCCGGT
ACAGCGTTTTTTCTTGTAGTCGAGTGTTTCATAGTTCAGCTGTCTCAAAT
TACGTGTCTGACGTGTACATGTTGCCAAGCCGGTGCAATAGATTTTCTTG
CAGGCCAAACTCTCGCGTGTTTGCGCTAGGGTAGAAGCAGCGAGGAGGTA
GATCTACATAGCACGGATGCAATGGCATGTGTTTGTATAGGTTCGTTTCT
AGGCTTGGAAAATTCCTAGACGGGGTGCGGCCCGGTTGCACGGACTTACT
TGAGACATGAAGCTTGAGTAAGGATAACTCGTGGGATGCTGGAAGGAACC
GCCGCGCTTTTTTCGAAGTATCCACTCGCACTGCTGTCGCCAGCCCGTTC
CCGGCAAGGAAAGTGTTGCAGCGATTCCCTCTCGTAGTGATACTGTAAAG
ACTACTTGTGGCTATACGACGTATTTCTGGACGAAATGAGAATAATGGGA
GTAAGAGTGCACAAGACTAGGAAAATTCAGCGAGGAAGAGTAATTATGTT
GCTACAGTAAAAAGCTTGAGGAGAGTTGTTTACGTTTTAGTCTACGCTCG
TTCAACTCGCAATATTTCCCCCCGGAAATAGGCTCAACGGTAGAGGGGGG
ATCATGTAACATATCGGACCGTTTTTTTGCCTCTCTGGGAGGAGGATAGA
CACCGCGCGTTTTGGGGGATGGTGATGTACAGTAGGCAGGCAGGGACGGC
AGGCAGCAATTTCGTGTGCTCGATTCAAACTAAACAAATGTTTTCATGTT
TTTCATGGTGTAAACTTGTTCCCCCTTAGTCTACATAGTTTGAAGTTGTC
GTGTTGATTGCTTGAGACGGAGGCTACCTCGGGCACAAGAACTCTTCTGT
GTAACCCCGGATTGAATCAAGTCAATTGGAGTTGGCAAGGACAGGGTATT
GTGGTACATATACATGTATACTGTAGTACGTAGTAGGTAAATATTGCGAG
CAACGAAGATTACAGAGTACGAAAACAGGGCTTCGCGTCGTTCTTCGTGC
TAGTACAAGCTACTGTAGTACGAAGTACCATGTATGATGGGGAGGGGGCA
AGTGCCCATGTACGGTCAGCGTGCAATACCGGTGTGTCGGGAAAGGACGG
GCTCTTGAGCCAAATACTTATGGTGGG

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig109:6764..12440+

>mRNA_Ecto-sp9_F_contig109.779.1 ID=mRNA_Ecto-sp9_F_contig109.779.1|Name=mRNA_Ecto-sp9_F_contig109.779.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2322bp|location=Sequence derived from alignment at Ecto-sp9_F_contig109:6764..12440+ (Ectocarpus species9 EcSCA_722f female)
ATGGGCCAAGAAGCCAAGATCACGGGCGCCCTCTCCCTGTTGGTACTACT
CGTGCTGCTCGTGTGCTACAGCCGAGTGGATCTCTTCGCAACAGCGTCAA
GCGGTCACCTCCGGACGTCGGACGCCCCCCGGGTATCATCACGGGAAGCC
TACGGCCGGCGCGACGGAGAACCGGGATGGCAACGAGCAGCAGAAGAGAA
GGAAGGGTTGGCGGCGGCACGGGCTCCGCCGGCGGCGCTGGGAAGGAGCT
TTGATTCATTCCCCAGCGCGTCTGACGCGACCATCATGTTCCTTCATGTC
TTCAAGATGGGCCAAGAAGCCAAGATCACGGGCGCCCTCTCCCTGTTGGT
ACTACTCGTGCTGCTCGTGTGCTACAGCCGAGTGGATCTCTTCGCAACAG
CGTCAAGCGGTCACCTCCGGACGTCGGACGCCCCCCGGGTATCATCACGG
GAAGCCTACGGCCGGCGCGACGGAGAACCGGGATGGCAACGAGCAGCAGA
AGAGAAGGAAGGGTTGGCGGCGGCACGGGCTCCGCCGGCGGCGCTGGGAA
GGAGCTTTGATTCATTCCCCAGCGCGTCTGACGCGACCATCATGTTCCTT
CATGTCTTCAAGTGCGCCGGGACGAGCCTTCGAGAGGTGTTCATGGCTCT
GGCGGAGGAGAAAGGATGGAGCCGCGCCGTAGTCGAGGAATGCACTCGAC
GAAGATCACCACGGCGGCTGGGCGCCGGGCCTGCTCTGACGTGCGCCGGG
ACGAGCCTTCGAGAGGTGTTCATGGCTCTGGCGGAGGAGAAAGGATGGAG
CCGCGCCGTAGTCGAGGAATGCACTCGACGAAGATCACCACGGCGGCTGG
GCGCCGGGCCTGCTCTGACGGAGAGCCACGTCATATGTCTCAACGACCAG
AACGCTTTGAGGGACAGCGCTAGTCAGCGGTGGGAAGTCGCAGGAACCAG
GGTCCTGGCGGGCCACTTCTTGTGGGGAGAGCCACGTCATATGTCTCAAC
GACCAGAACGCTTTGAGGGACAGCGCTAGTCAGCGGTGGGAAGTCGCAGG
AACCAGGGTCCTGGCGGGCCACTTCTTGTGGGACCTTCGGCAGTACGTCA
CCCCGCCGCACCTCCTGATCACCATGCTGAGGGACCCGCTGGAGTTGTTC
GTGTCCGCGAAACAGTTCAAGCACAGGGAGCAGACGGCCAGTCTGGAAGC
CGCCGCGGACTTCGTCGCGAGCAACATGCGGGGTCGCCTAGGACCTTCGG
CAGTACGTCACCCCGCCGCACCTCCTGATCACCATGCTGAGGGACCCGCT
GGAGTTGTTCGTGTCCGCGAAACAGTTCAAGCACAGGGAGCAGACGGCCA
GTCTGGAAGCCGCCGCGGACTTCGTCGCGAGCAACATGCGGGGTCGCCTA
GGGTGGGAAGACCCTTCGGACATCGGTTTCGTTCGACGGTTTCTGGGCAC
GGACGCCGCGAACAGCTACGACCCTCAGCTTGTGTACACGAAAGAACAGG
TGGGAAGACCCTTCGGACATCGGTTTCGTTCGACGGTTTCTGGGCACGGA
CGCCGCGAACAGCTACGACCCTCAGCTTGTGTACACGAAAGAACAGTCCT
CGGCGATGGCGTCGACCGCGGCCGAACACCTCAGCAACTTCTGGGTGGTA
GGAGTGGTGGAGCAGTACGCTGGTTTCGTTAAAGTTCTCCAGCACACGCT
AGATCCGGAGCTAGAGCACCCCCGACTTTGGGAGGCCGCATCAGAGGTTA
ACAACAACGGTCCTCGGCGATGGCGTCGACCGCGGCCGAACACCTCAGCA
ACTTCTGGGTGGTAGGAGTGGTGGAGCAGTACGCTGGTTTCGTTAAAGTT
CTCCAGCACACGCTAGATCCGGAGCTAGAGCACCCCCGACTTTGGGAGGC
CGCATCAGAGGTTAACAACAACGGGTCTCCGGTGCACTCCCGCGACGTAC
TCGACCGCATCGATCCGGACCTGGTGCGAGAGTTTAACGCTACTCTCAGC
TTCCAGTGGCAGGTCTCCGGTGCACTCCCGCGACGTACTCGACCGCATCG
ATCCGGACCTGGTGCGAGAGTTTAACGCTACTCTCAGCTTCCAGTGGCAG
GTATACGACGTAGCCTTGCAGCTTTGGGACTCGAGATGCCGTGAGGTGCT
ACCTCTCCAAGATCACAGCAGCCTTTGCTCGGTTCCCGGCCACAAGTCGA
GCCTTTCGTGAGTATACGACGTAGCCTTGCAGCTTTGGGACTCGAGATGC
CGTGAGGTGCTACCTCTCCAAGATCACAGCAGCCTTTGCTCGGTTCCCGG
CCACAAGTCGAGCCTTTCGTGA