mRNA_Ecto-sp9_F_contig10896.776.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10896.776.1 vs.
Match: UDP-glucose:glycoprotein (glucosyltransferase, C-terminal, family GT24 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G654_ECTSI) HSP 1 Score: 217 bits (552), Expect = 2.000e-63 Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 1
Query: 10 QVMMMSVVKRASMPVTFWLLENFLSSSFKESAQALAEEFGFRVEFVTYKWPEWLRRQSEKQRIIWGYKILFLDVLFPLSVDKVIYVDADQVVRADLKELWDLDLQGAP 333
+VMMMSVVKRASMPVTFWLLENFLSSSFKESAQALAEEFGFRVEFVTYKWPEWLRRQSEKQRIIWGYKILFLDVLFPLSVDKVIYVDADQVVRADLKELWDLDLQGAP
Sbjct: 848 KVMMMSVVKRASMPVTFWLLENFLSSSFKESAQALAEEFGFRVEFVTYKWPEWLRRQSEKQRIIWGYKILFLDVLFPLSVDKVIYVDADQVVRADLKELWDLDLQGAP 955
BLAST of mRNA_Ecto-sp9_F_contig10896.776.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GBB5_9STRA) HSP 1 Score: 176 bits (446), Expect = 4.500e-53 Identity = 81/106 (76.42%), Postives = 97/106 (91.51%), Query Frame = 1
Query: 10 QVMMMSVVKRASMPVTFWLLENFLSSSFKESAQALAEEFGFRVEFVTYKWPEWLRRQSEKQRIIWGYKILFLDVLFPLSVDKVIYVDADQVVRADLKELWDLDLQG 327
++MM+SVVKRAS+PV FWL+ENFLS +FKE +AE++GF+V FVTYKWP WLR+Q+EKQRIIWGYKILFLDVLFPL+V KVIYVDADQVVRADL+ELW++DLQG
Sbjct: 9 RIMMLSVVKRASLPVKFWLVENFLSPAFKEFVPRMAEQYGFQVGFVTYKWPNWLRQQTEKQRIIWGYKILFLDVLFPLNVKKVIYVDADQVVRADLRELWEMDLQG 114
BLAST of mRNA_Ecto-sp9_F_contig10896.776.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y089_HETAK) HSP 1 Score: 177 bits (449), Expect = 6.220e-53 Identity = 85/111 (76.58%), Postives = 98/111 (88.29%), Query Frame = 1
Query: 1 RAPQVMMMSVVKRASMPVTFWLLENFLSSSFKESAQALAEEFGFRVEFVTYKWPEWLRRQSEKQRIIWGYKILFLDVLFPLSVDKVIYVDADQVVRADLKELWDLDLQGAP 333
R ++MM+SVVKR+SM V FWL ENFLS +FK+SA A+A+E GF V +VTYKWPEWLR+Q+EKQRIIWGYKILFLDVLFPLSV KVIYVDADQVVRADL+ELW+LDL G P
Sbjct: 54 RMLKIMMLSVVKRSSMKVKFWLFENFLSPTFKDSAAAMAKEAGFEVGYVTYKWPEWLRQQTEKQRIIWGYKILFLDVLFPLSVKKVIYVDADQVVRADLRELWELDLGGKP 164
BLAST of mRNA_Ecto-sp9_F_contig10896.776.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3J5_9STRA) HSP 1 Score: 171 bits (433), Expect = 3.600e-51 Identity = 80/111 (72.07%), Postives = 94/111 (84.68%), Query Frame = 1
Query: 1 RAPQVMMMSVVKRASMPVTFWLLENFLSSSFKESAQALAEEFGFRVEFVTYKWPEWLRRQSEKQRIIWGYKILFLDVLFPLSVDKVIYVDADQVVRADLKELWDLDLQGAP 333
R ++MM+SV KR S+ V FWL ENFLS SFK SA A+A + G +EFVTYKWPEWLR Q+EKQRIIWGYKILFLDVLFPL++ ++IYVDADQV+R DLKELWDLDL+GAP
Sbjct: 5 RLLRIMMLSVTKRTSVKVKFWLFENFLSPSFKSSALAMASKIGCDIEFVTYKWPEWLRAQTEKQRIIWGYKILFLDVLFPLNLKRIIYVDADQVMRGDLKELWDLDLEGAP 115
BLAST of mRNA_Ecto-sp9_F_contig10896.776.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUC4_9STRA) HSP 1 Score: 179 bits (454), Expect = 5.150e-50 Identity = 83/111 (74.77%), Postives = 99/111 (89.19%), Query Frame = 1
Query: 1 RAPQVMMMSVVKRASMPVTFWLLENFLSSSFKESAQALAEEFGFRVEFVTYKWPEWLRRQSEKQRIIWGYKILFLDVLFPLSVDKVIYVDADQVVRADLKELWDLDLQGAP 333
R ++MM+SV KR S+PV FWLLENFLS +FK +A A+AE + F+VEF+TYKWP+WLR+Q+EKQRIIWGYKILFLDVLFPLSV K+IYVDADQV+RADLKELWDLDL+G P
Sbjct: 1115 RMLKIMMLSVSKRTSVPVKFWLLENFLSPAFKTAALAMAEHYNFQVEFITYKWPDWLRQQTEKQRIIWGYKILFLDVLFPLSVKKIIYVDADQVLRADLKELWDLDLKGRP 1225
BLAST of mRNA_Ecto-sp9_F_contig10896.776.1 vs.
Match: Glycoprotein (glucosyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4Y1_9STRA) HSP 1 Score: 179 bits (454), Expect = 5.190e-50 Identity = 83/111 (74.77%), Postives = 99/111 (89.19%), Query Frame = 1
Query: 1 RAPQVMMMSVVKRASMPVTFWLLENFLSSSFKESAQALAEEFGFRVEFVTYKWPEWLRRQSEKQRIIWGYKILFLDVLFPLSVDKVIYVDADQVVRADLKELWDLDLQGAP 333
R ++MM+SV KR S+PV FWLLENFLS +FK +A A+AE + F+VEF+TYKWP+WLR+Q+EKQRIIWGYKILFLDVLFPLSV K+IYVDADQV+RADLKELWDLDL+G P
Sbjct: 1503 RMLKIMMLSVSKRTSVPVKFWLLENFLSPAFKTAALAMAEHYNFQVEFITYKWPDWLRQQTEKQRIIWGYKILFLDVLFPLSVKKIIYVDADQVLRADLKELWDLDLKGRP 1613
BLAST of mRNA_Ecto-sp9_F_contig10896.776.1 vs.
Match: Hypothetical (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1URG1_9STRA) HSP 1 Score: 176 bits (446), Expect = 5.300e-50 Identity = 84/111 (75.68%), Postives = 94/111 (84.68%), Query Frame = 1
Query: 1 RAPQVMMMSVVKRASMPVTFWLLENFLSSSFKESAQALAEEFGFRVEFVTYKWPEWLRRQSEKQRIIWGYKILFLDVLFPLSVDKVIYVDADQVVRADLKELWDLDLQGAP 333
R ++MM+SV KR+SM V FWL ENFLS SFK +A+ +A+E G VEFVTYKWPEWLR Q EKQRIIWGYKILFLDVLFPL V K+IYVDADQVVR DLKELWD+DLQGAP
Sbjct: 345 RFMKIMMLSVTKRSSMKVKFWLFENFLSPSFKATAKHMAKEIGCEVEFVTYKWPEWLRGQKEKQRIIWGYKILFLDVLFPLGVKKIIYVDADQVVRGDLKELWDMDLQGAP 455
BLAST of mRNA_Ecto-sp9_F_contig10896.776.1 vs.
Match: Aste57867_15231 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2N8_9STRA) HSP 1 Score: 167 bits (422), Expect = 8.380e-50 Identity = 77/106 (72.64%), Postives = 88/106 (83.02%), Query Frame = 1
Query: 10 QVMMMSVVKRASMPVTFWLLENFLSSSFKESAQALAEEFGFRVEFVTYKWPEWLRRQSEKQRIIWGYKILFLDVLFPLSVDKVIYVDADQVVRADLKELWDLDLQG 327
++MM+SV+KR + PVTFWLLENFLS FK S L EFG + +TYKWP WLRRQ+EKQRIIWGYKILFLDVLFPL V+K+IYVDADQVVRADL ELW +DLQG
Sbjct: 3 KLMMLSVLKRTNNPVTFWLLENFLSPDFKNSVPVLQAEFGMDIRLITYKWPNWLRRQTEKQRIIWGYKILFLDVLFPLGVEKIIYVDADQVVRADLNELWTMDLQG 108
BLAST of mRNA_Ecto-sp9_F_contig10896.776.1 vs.
Match: Uncharacterized (protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DTD7_CAFRO) HSP 1 Score: 177 bits (450), Expect = 1.800e-49 Identity = 83/108 (76.85%), Postives = 94/108 (87.04%), Query Frame = 1
Query: 10 QVMMMSVVKRASMPVTFWLLENFLSSSFKESAQALAEEFGFRVEFVTYKWPEWLRRQSEKQRIIWGYKILFLDVLFPLSVDKVIYVDADQVVRADLKELWDLDLQGAP 333
++MM+SV KR+S PVTFWL+ENFLS FKE+ ALAE GF V+ VTYKWP WLR Q+EKQRIIWGYK+LFLDVLFPL +DKVIYVDADQVVRADL ELWDLDL+GAP
Sbjct: 1648 KIMMLSVTKRSSRPVTFWLVENFLSPQFKETVPALAESAGFEVKMVTYKWPNWLRGQTEKQRIIWGYKVLFLDVLFPLDLDKVIYVDADQVVRADLAELWDLDLEGAP 1755
BLAST of mRNA_Ecto-sp9_F_contig10896.776.1 vs.
Match: Hypothetical (protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AGZ5_9STRA) HSP 1 Score: 167 bits (422), Expect = 3.530e-49 Identity = 81/108 (75.00%), Postives = 90/108 (83.33%), Query Frame = 1
Query: 10 QVMMMSVVKRASMPVTFWLLENFLSSSFKESAQALAEEFGFRVEFVTYKWPEWLRRQSEKQRIIWGYKILFLDVLFPLSVDKVIYVDADQVVRADLKELWDLDLQGAP 333
++MM+SV KR S V FWL ENFLS SFK +A A+A++ G V FVTYKWPEWLR QSEKQRIIWGYKILFLDVLFPL V K+IYVDADQVVR D+KEL DLDLQGAP
Sbjct: 31 KIMMLSVTKRTSTKVKFWLFENFLSPSFKATATAMAKKIGCEVGFVTYKWPEWLRAQSEKQRIIWGYKILFLDVLFPLDVKKIIYVDADQVVRGDMKELVDLDLQGAP 138 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10896.776.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10896.776.1 >prot_Ecto-sp9_F_contig10896.776.1 ID=prot_Ecto-sp9_F_contig10896.776.1|Name=mRNA_Ecto-sp9_F_contig10896.776.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=106bp MMMSVVKRASMPVTFWLLENFLSSSFKESAQALAEEFGFRVEFVTYKWPEback to top mRNA from alignment at Ecto-sp9_F_contig10896:234..2303- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10896.776.1 ID=mRNA_Ecto-sp9_F_contig10896.776.1|Name=mRNA_Ecto-sp9_F_contig10896.776.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2070bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10896:234..2303- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10896:234..2303- >mRNA_Ecto-sp9_F_contig10896.776.1 ID=mRNA_Ecto-sp9_F_contig10896.776.1|Name=mRNA_Ecto-sp9_F_contig10896.776.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=636bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10896:234..2303- (Ectocarpus species9 EcSCA_722f female)back to top |