mRNA_Ecto-sp9_F_contig1089.773.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1089.773.1
Unique NamemRNA_Ecto-sp9_F_contig1089.773.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1089.773.1 vs.
Match: Enoyl-CoA (hydratase/isomerase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS1_ECTSI)

HSP 1 Score: 429 bits (1102), Expect = 4.540e-149
Identity = 218/229 (95.20%), Postives = 218/229 (95.20%), Query Frame = 1
Query:    1 PRPVIGLFPDVGTAHVLSRLPGGLGQYLGLTGARLRGNDLLHCGLATHLVPRDRLSELEEALAADGGDDPASVLGRFASGAGDPASSMLAQARPHHKRHNKRWIDEAFGGVPSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTALKVTHRHISWAATTTLKDCLEQDFRVMQHMAMNGDFDEGVRALLIDKDNQPAWSPPTLEGVADSRVQELFSEIEAGETVF 687
            P  VIGLFPDVGTAHVLSRLPGGLGQYLGLTGARLRGNDLLHCGLATHLVPRDRLSELEEALAADGGDDPASVLGRFASGAGDPASSMLAQ        NKRWIDEAFGG PSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTALKVTHRHISWAATTTLKDCLEQDFRVMQHMAMNGDFDEGVRALLIDKDNQPAWSPPTLEGVADSRVQELFSEIEAGETVF
Sbjct:  160 PETVIGLFPDVGTAHVLSRLPGGLGQYLGLTGARLRGNDLLHCGLATHLVPRDRLSELEEALAADGGDDPASVLGRFASGAGDPASSMLAQ--------NKRWIDEAFGGAPSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTALKVTHRHISWAATTTLKDCLEQDFRVMQHMAMNGDFDEGVRALLIDKDNQPAWSPPTLEGVADSRVQELFSEIEAGETVF 380          
BLAST of mRNA_Ecto-sp9_F_contig1089.773.1 vs.
Match: 3-hydroxyisobutyryl-coenzyme (a hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAS6_9STRA)

HSP 1 Score: 171 bits (434), Expect = 4.800e-48
Identity = 105/228 (46.05%), Postives = 130/228 (57.02%), Query Frame = 1
Query:    1 PRPVIGLFPDVGTAHVLSRLPGGLGQYLGLTGARLRGNDLLHCGLATHLVPRDRLSELEEALAADGGDDPASVLGRFASGAGDPASSMLAQARPHHKRHNKRWIDEAFGGVPSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTALKVTHRHISWAATTTLKDCLEQDFRVMQHMAMNGDFDEGVRALLIDKDNQPAWSPPTLEGVADSRVQELFSEIEAGETV 684
            P   IGLFPDVG + VL+RLPGGLG Y+ L GARLR  DLL+ GLATH V  DR + L   + ADG D P  +L RF+S     A     +  P  + H    ID  FGG   VE +V  LR      + G EW++  LE+L K SPTALKVTH  +S A   +L+ C   DFR  Q  A   DF EGVRA+L+DKD  P W P  LE V+   V+  F+ + A + V
Sbjct:  176 PETAIGLFPDVGASFVLARLPGGLGAYIALLGARLRACDLLYAGLATHCVAADRRAAL---IDADGRDVP-DILARFSS-----APXXXXKGGPVLEPHRDA-IDRCFGGKNGVEGVVAALR------AEGSEWSRATLEALLKMSPTALKVTHHQLSLARGLSLRGCFVNDFRASQRRAAAPDFVEGVRAVLVDKDGAPRWRPAALEDVSAQDVEGHFATLGAHDLV 387          
BLAST of mRNA_Ecto-sp9_F_contig1089.773.1 vs.
Match: 3-hydroxyisobutyryl-CoA (hydrolase n=1 Tax=Limimonas halophila TaxID=1082479 RepID=A0A1G7QHC6_9HYPH)

HSP 1 Score: 166 bits (419), Expect = 4.430e-46
Identity = 103/231 (44.59%), Postives = 128/231 (55.41%), Query Frame = 1
Query:    1 PRPVIGLFPDVGTAHVLSRLPGGLGQYLGLTGARLRGNDLLHCGLATHLVPRDRLSELEEAL--AADGGDDPASVLGRFASGAGDPASSMLAQARPHHKRHNKRWIDEAFGGVPSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTALKVTHRHISWAATTTLKDCLEQDFRVMQHMAMNGDFDEGVRALLIDKDNQPAWSPPTLEGVADSRVQELFSEIEAGETVF 687
            P   IG FPDVG   VLSRLPG LG YL LTGARL   D ++ GLATH VP DR++ELEEAL  AA   D  A+V    A  AGDP  + LA+ R          ID  F    SVE I+  L       + G EWAQ    +L + SP+++KVT   I  AA      C+  ++R+ Q M    DF EGVRA+L+DKDN PAW+P  LE V D+ V   F  ++  +  F
Sbjct:  148 PETAIGFFPDVGATWVLSRLPGQLGMYLALTGARLTAADAVYTGLATHYVPSDRMAELEEALPSAAFEDDAHAAVADVLADFAGDPGPAPLAEHR--------EAIDRCFAA-ESVEGILAALD------AEGSEWAQQTAATLRQRSPSSMKVTFAAIRAAADRDFDACMVTEYRLSQAMTARADFFEGVRAVLVDKDNSPAWNPARLEDVTDAEVARCFDPLDVPDLSF 363          
BLAST of mRNA_Ecto-sp9_F_contig1089.773.1 vs.
Match: 3-hydroxyisobutyryl-CoA (hydrolase, mitochondrial n=1 Tax=Lutzomyia longipalpis TaxID=7200 RepID=A0A7G3AFK5_LUTLO)

HSP 1 Score: 165 bits (417), Expect = 4.490e-46
Identity = 101/225 (44.89%), Postives = 130/225 (57.78%), Query Frame = 1
Query:    1 PRPVIGLFPDVGTAHVLSRLPGGLGQYLGLTGARLRGNDLLHCGLATHLVPRDRLSELEEAL---AADGGDDPASVLGRFASGAGDPASSMLAQARPHHKRHNKRWIDEAFGGVPSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTALKVTHRHISWAATTTLKDCLEQDFRVMQHMAMNGDFDEGVRALLIDKDNQPAWSPPTLEGVADSRVQELFSEI 666
            P   IGLFPDVG  + L RL G LG +LGLTG RL+G D+   G+ATH     R+ ELEEAL   + DG  D A+ L +F     D +  +L        +H  + IDE F G  +VEEI+ RLR          EWAQ  L+ LAK SPT++KV+ + I   A  TL +CL  ++R+    A + D  EGVRALL+D+DNQP W+PPTLE V D RV   F  +
Sbjct:  126 PETAIGLFPDVGGGYFLPRLRGKLGMFLGLTGFRLKGRDVEKAGVATHYCESARIPELEEALTKCSTDG--DVAATLAKFCPK--DTSEFIL-------NKHLAQ-IDECFSGA-TVEEILERLR------KDNSEWAQKTLQGLAKMSPTSMKVSKKQIDLGANMTLPECLVMEYRLAVRHAQDSDLKEGVRALLVDRDNQPKWNPPTLEEVTDERVDSFFKPL 331          
BLAST of mRNA_Ecto-sp9_F_contig1089.773.1 vs.
Match: 3-hydroxyisobutyryl-CoA (hydrolase, mitochondrial (Fragment) n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2EC45_9DIPT)

HSP 1 Score: 163 bits (413), Expect = 2.360e-45
Identity = 95/224 (42.41%), Postives = 126/224 (56.25%), Query Frame = 1
Query:    1 PRPVIGLFPDVGTAHVLSRLPGGLGQYLGLTGARLRGNDLLHCGLATHLVPRDRLSELEEALAADGGD-DPASVLGRFASGAGDPASSMLAQARPHHKRHNKRWIDEAFGGVPSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTALKVTHRHISWAATTTLKDCLEQDFRVMQHMAMNGDFDEGVRALLIDKDNQPAWSPPTLEGVADSRVQELFSEIE 669
            P   IGLFPDVG    L RL G LG +LGLTG RL+G D+   G+ATH     ++ ELE  L     D + A+ LG+F S            + P         I+E F G  +VEEI+ RL+          EWA+G L++LAK SPT++KV+ + I   A  TL +CL  ++R+    A + D  EGVRALL+D+DNQP W+PPTLE V D RV   F+ +E
Sbjct:  129 PETAIGLFPDVGGGFFLPRLRGKLGMFLGLTGVRLKGRDVEKSGVATHFCESAKIPELEAELCKCSSDQEVAATLGKFCS----------KDSTPFVLEQYMEQINECFSGA-TVEEILERLK------RDNSEWAKGILKTLAKMSPTSMKVSKKQIDLGANLTLPECLVMEYRLAVRHAKDSDLKEGVRALLVDRDNQPKWNPPTLEEVTDQRVDSFFAPLE 335          
BLAST of mRNA_Ecto-sp9_F_contig1089.773.1 vs.
Match: 3-hydroxyisobutyryl-CoA (hydrolase, mitochondrial n=7 Tax=Muscinae TaxID=43910 RepID=A0A1I8MUP3_MUSDO)

HSP 1 Score: 162 bits (410), Expect = 1.200e-44
Identity = 94/223 (42.15%), Postives = 126/223 (56.50%), Query Frame = 1
Query:    1 PRPVIGLFPDVGTAHVLSRLPGGLGQYLGLTGARLRGNDLLHCGLATHLVPRDRLSELEEALA-ADGGDDPASVLGRFASGAGDPASSMLAQARPHHKRHNKRWIDEAFGGVPSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTALKVTHRHISWAATTTLKDCLEQDFRVMQHMAMNGDFDEGVRALLIDKDNQPAWSPPTLEGVADSRVQELFSEI 666
            P   IGLFPDVG ++ L RL G +G YLGLTG RL+G D+L  G+ATH     +LS+LE AL      D+   +L +F S            A+P         I+  F G  SVEEIV  L+        G EWA   L++++K SPT+LKVT R +   +  +L  CL  ++R++     N DF EGVRALLIDKD +P W+P TLE V + RVQ  F+++
Sbjct:  160 PETAIGLFPDVGGSYFLPRLEGKIGLYLGLTGFRLKGEDVLKAGIATHFCESSKLSDLESALLNCPDADEVPEILSKFNS----------PSAKPFVLTPQMEQINNCFSG-ESVEEIVENLK------KDGSEWATKTLQTMSKMSPTSLKVTFRQLELGSKLSLPQCLNMEYRMVVRHLENSDFKEGVRALLIDKDQKPNWNPTTLEAVNEERVQSFFAKL 365          
BLAST of mRNA_Ecto-sp9_F_contig1089.773.1 vs.
Match: Hypothetical (protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SUW8_9SPIT)

HSP 1 Score: 162 bits (410), Expect = 1.260e-44
Identity = 98/231 (42.42%), Postives = 124/231 (53.68%), Query Frame = 1
Query:    1 PRPVIGLFPDVGTAHVLSRLPGGLGQYLGLTGARLRGNDLLHCGLATHLVPRDRLSELEEALA-ADGGDDPASVLGRFASGAGDPASSMLAQARPHHKRHNKRWIDEAFGGVPSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTALKVTHRHISWAATTTLKDCLEQDFRVMQH-MAMNGDFDEGVRALLIDKDNQPAWSPPTLEGVADSRVQELFSEIEAGETVF 687
            P   IGLFPDVG +H LS +PGGLG YL LTGARL   DLL+ GLATH +P   +  L   L   DG           A  AG P  +M+     H  RH+            SVE I+  LR M        EWA+G L++L K SPT+ KVT R +  A   TL++CL  +FR  Q  M    DF EG+RA L+DKD  P W+PPT++GV+++ V E F  +   E  F
Sbjct:  164 PETNIGLFPDVGASHFLSSMPGGLGTYLSLTGARLGAADLLYTGLATHYIPSSSIPSLLSKLELCDGAAHVEEACAMLAEDAGAPPLAMVRPQIDHCFRHD------------SVENILTELRAM-----DSSEWAEGTLKTLEKMSPTSCKVTLRLVRQAKGQTLENCLRAEFRACQRFMQQPSDFFEGIRAALVDKDKHPFWNPPTIDGVSEAAVNEYFVPLGERELEF 377          
BLAST of mRNA_Ecto-sp9_F_contig1089.773.1 vs.
Match: 3-hydroxyisobutyryl-CoA (hydrolase, mitochondrial n=7 Tax=Nyssorhynchus TaxID=44543 RepID=W5JCR8_ANODA)

HSP 1 Score: 161 bits (408), Expect = 1.850e-44
Identity = 97/226 (42.92%), Postives = 126/226 (55.75%), Query Frame = 1
Query:    1 PRPVIGLFPDVGTAHVLSRLPGGLGQYLGLTGARLRGNDLLHCGLATHLVPRDRLSELEEAL-AADGGDDPASVLGRFASGAGDPASSMLAQARPHHKRHNKRWIDEAFGGVPSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTALKVTHRHISWAATTTLKDCLEQDFRVMQHMAMNGDFDEGVRALLIDKDNQPAWSPPTLEGVADSRVQELFSEIEAG 675
            P   IGLFPDVG  + L RL G LG YLGLTG RL+G D+   G+ATH V    LS LE+ L A     +  +VL RF+         +L + R        + ID+ FG  P+VEEI+ RL         G EWAQ  L+ L K SPT+L VT + +   A   LK CL  ++R+  H A++ DF EGVRALLID+D +P W P TL  V  +RV++ F  +  G
Sbjct:  137 PETAIGLFPDVGGGYFLPRLEGKLGLYLGLTGFRLKGRDVFKAGVATHYVESKNLSALEQQLLATTSSTEVENVLERFSEKRDAGVEFVLEKQR--------KQIDQCFGA-PTVEEILKRLE------QDGSEWAQSTLKLLHKMSPTSLIVTQKQLELGAKMDLKTCLRMEYRLAVHHAIDSDFKEGVRALLIDRDQKPRWQPATLAEVDPARVEKFFGPLPDG 347          
BLAST of mRNA_Ecto-sp9_F_contig1089.773.1 vs.
Match: enoyl-CoA (hydratase/isomerase family protein n=1 Tax=Azospirillum oleiclasticum TaxID=2735135 RepID=UPI0015D4CB0F)

HSP 1 Score: 160 bits (405), Expect = 4.290e-44
Identity = 97/231 (41.99%), Postives = 131/231 (56.71%), Query Frame = 1
Query:    1 PRPVIGLFPDVGTAHVLSRLPGGLGQYLGLTGARLRGNDLLHCGLATHLVPRDRLSELEEALAADG--GDDPASVLGRFASGAGDPASSMLAQARPHHKRHNKRWIDEAFGGVPSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTALKVTHRHISWAATTTLKDCLEQDFRVMQHMAMNGDFDEGVRALLIDKDNQPAWSPPTLEGVADSRVQELFSEIEAGETVF 687
            P   IGLFPDVG  H L R PGG+G YLGLTG RL+G D++  G+   LVP DRL  L +A+AA G   D+  ++L   A+ A D   + LA  RP         ID  F G  SVE I+  L       + G +WA+G L+  A+ +PT+LKVT   +   A    +DC+  ++R+ Q      DF EGVRALL+DKD  P W+P TL+ V  +RV+  F+  +AG+  F
Sbjct:  142 PETGIGLFPDVGGTHFLPRCPGGVGLYLGLTGERLKGADVVEAGVGDVLVPSDRLDSLVDAIAASGCGADEVMAILRAHAAPAAD---APLAALRPA--------IDRCFAGA-SVEAIMAALD------AEGTDWARGVLDIFARVAPTSLKVTLEAMRRGAALEFEDCMVMEYRLSQSFLAADDFYEGVRALLVDKDKNPRWNPATLDAVDAARVERYFATPKAGDLSF 354          
BLAST of mRNA_Ecto-sp9_F_contig1089.773.1 vs.
Match: ECH_2 (domain-containing protein n=2 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1Z5RJZ9_SORBI)

HSP 1 Score: 161 bits (408), Expect = 5.050e-44
Identity = 97/233 (41.63%), Postives = 135/233 (57.94%), Query Frame = 1
Query:    1 PRPVIGLFPDVGTAHVLSRLPGGLGQYLGLTGARLRGNDLLHCGLATHLVPRDRLSELEEALAADGGDDP---ASVLGRFASGAGDPASSMLAQARPHHKRHNKRWIDEAFGGVPSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTALKVTHRHISWAATTTLKDCLEQDFRVMQHMAMNGDFD----EGVRALLIDKDNQPAWSPPTLEGVADSRVQELFSEIEAGE 678
            P   +GLFPDVG ++ LSRLPG  G+YLGL+GARL G ++L CGLATH VP +RL  LEE+L      +P    S + +FA       +S L +    +K  +KR ++E    + S+EE+   L           EW    ++ L KASPT+LK++ R I    T T+ +CL +++R++ H+ M GDF     EG RA+L+DKD  P W PP LE V D  V+E FS I+  E
Sbjct:  171 PETALGLFPDVGASYFLSRLPGFYGEYLGLSGARLDGAEMLACGLATHFVPSNRLLLLEESLKKVNTSNPFVVGSTIDQFAQQPSLKENSSLNRMEIINKCFSKRTVEEI---ISSLEEVASDL---------ADEWVAATIQYLKKASPTSLKISLRSIREGRTQTVGECLHREYRMVCHV-MRGDFSPDFFEGCRAVLVDKDKNPMWMPPRLEQVHDKAVEEYFSRIDDPE 390          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1089.773.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Enoyl-CoA4.540e-14995.20hydratase/isomerase family protein n=1 Tax=Ectocar... [more]
3-hydroxyisobutyryl-coenzyme4.800e-4846.05a hydrolase n=1 Tax=Tribonema minus TaxID=303371 R... [more]
3-hydroxyisobutyryl-CoA4.430e-4644.59hydrolase n=1 Tax=Limimonas halophila TaxID=108247... [more]
3-hydroxyisobutyryl-CoA4.490e-4644.89hydrolase, mitochondrial n=1 Tax=Lutzomyia longipa... [more]
3-hydroxyisobutyryl-CoA2.360e-4542.41hydrolase, mitochondrial (Fragment) n=1 Tax=Phlebo... [more]
3-hydroxyisobutyryl-CoA1.200e-4442.15hydrolase, mitochondrial n=7 Tax=Muscinae TaxID=43... [more]
Hypothetical1.260e-4442.42protein n=1 Tax=Strombidinopsis acuminata TaxID=14... [more]
3-hydroxyisobutyryl-CoA1.850e-4442.92hydrolase, mitochondrial n=7 Tax=Nyssorhynchus Tax... [more]
enoyl-CoA4.290e-4441.99hydratase/isomerase family protein n=1 Tax=Azospir... [more]
ECH_25.050e-4441.63domain-containing protein n=2 Tax=Sorghum bicolor ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1089contigEcto-sp9_F_contig1089:22870..26806 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score428.7
Seed ortholog evalue1.7e-117
Seed eggNOG ortholog2880.D7FIS1
KEGG rclassRC00004,RC00014,RC00137
KEGG koko:K05605
KEGG ReactionR03158,R05064
KEGG Pathwayko00280,ko00410,ko00640,ko01100,ko01200,map00280,map00410,map00640,map01100,map01200
KEGG ModuleM00013
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016020,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.3-hydroxyisobutyryl-CoA hydrolase activity
EggNOG OGsCOG1024@1,KOG1684@2759
EC3.1.2.4
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEnoyl-CoA hydratase/isomerase family protein
Ec32 orthologEc-20_003150.1
Exons5
Model size690
Cds size690
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1089.773.1prot_Ecto-sp9_F_contig1089.773.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1089 22870..26806 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928310.250865-CDS-Ecto-sp9_F_contig1089:22869..230281622928310.250865-CDS-Ecto-sp9_F_contig1089:22869..23028Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1089 22870..23028 -
1692277830.532047-CDS-Ecto-sp9_F_contig1089:22869..230281692277830.532047-CDS-Ecto-sp9_F_contig1089:22869..23028Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1089 22870..23028 -
1622928310.2661746-CDS-Ecto-sp9_F_contig1089:24118..241961622928310.2661746-CDS-Ecto-sp9_F_contig1089:24118..24196Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1089 24119..24196 -
1692277830.54159-CDS-Ecto-sp9_F_contig1089:24118..241961692277830.54159-CDS-Ecto-sp9_F_contig1089:24118..24196Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1089 24119..24196 -
1622928310.2799828-CDS-Ecto-sp9_F_contig1089:24693..248491622928310.2799828-CDS-Ecto-sp9_F_contig1089:24693..24849Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1089 24694..24849 -
1692277830.5489762-CDS-Ecto-sp9_F_contig1089:24693..248491692277830.5489762-CDS-Ecto-sp9_F_contig1089:24693..24849Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1089 24694..24849 -
1622928310.293973-CDS-Ecto-sp9_F_contig1089:25701..258371622928310.293973-CDS-Ecto-sp9_F_contig1089:25701..25837Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1089 25702..25837 -
1692277830.5563617-CDS-Ecto-sp9_F_contig1089:25701..258371692277830.5563617-CDS-Ecto-sp9_F_contig1089:25701..25837Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1089 25702..25837 -
1622928310.307307-CDS-Ecto-sp9_F_contig1089:26645..268061622928310.307307-CDS-Ecto-sp9_F_contig1089:26645..26806Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1089 26646..26806 -
1692277830.5639012-CDS-Ecto-sp9_F_contig1089:26645..268061692277830.5639012-CDS-Ecto-sp9_F_contig1089:26645..26806Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1089 26646..26806 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1089.773.1

>prot_Ecto-sp9_F_contig1089.773.1 ID=prot_Ecto-sp9_F_contig1089.773.1|Name=mRNA_Ecto-sp9_F_contig1089.773.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=230bp
PRPVIGLFPDVGTAHVLSRLPGGLGQYLGLTGARLRGNDLLHCGLATHLV
PRDRLSELEEALAADGGDDPASVLGRFASGAGDPASSMLAQARPHHKRHN
KRWIDEAFGGVPSVEEIVLRLRGMVAEASGGREWAQGALESLAKASPTAL
KVTHRHISWAATTTLKDCLEQDFRVMQHMAMNGDFDEGVRALLIDKDNQP
AWSPPTLEGVADSRVQELFSEIEAGETVF*
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mRNA from alignment at Ecto-sp9_F_contig1089:22870..26806-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1089.773.1 ID=mRNA_Ecto-sp9_F_contig1089.773.1|Name=mRNA_Ecto-sp9_F_contig1089.773.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3937bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1089:22870..26806- (Ectocarpus species9 EcSCA_722f female)
CCGAGACCAGTGATCGGGCTATTCCCCGACGTTGGCACGGCGCACGTTCT CTCCAGGCTGCCTGGGGGGCTGGGGCAGTACCTGGGCTTGACGGGTGCAA GGCTGCGGGGGAACGACCTGTTGCATTGCGGCCTCGCCACTCACCTCGTG CCTAGAGACAGGTAGGCGGCGTTTGGGACAGGTATTTTGTCCGTGTCCAC GTTGTTGATTGGTACCGTAGCACGTTTTTTTTTTTTGTCGCCGTGGTGGT GGTGATGCACGATGTTGTGCATGGTTGCACGCAGGGTGTTGAGGGGAACG CCAGCTATTGCCTTTTGTATTTCCGAGCCTCCTTGTCTCCTTCGGACACC TGATGCTTTGTGTGCCTGGCGTTGGACTATGATGGATGCTTTTCGCACGT TTTAGCTAGTGGGGAGTGACACATAGGTATGTAAGGCTAACGCGACTTGC TGTGACCTTGGGCGAAGACGATCACACTGCCGCCGCCGGTCTCACGCCTG TTTGACACGCTGACGATCCAACCGCGGCTCTCTTTTTGAGCGGCCGAGCT CGTTTCCGTTGGCTTCGAGGGGTCGGAGGGAGGGGCGGGGGGTAGTCCAA GCACCGCTCGCAACCTTATCGGCCCAAACGCCGGCCGTTCGATGAACCAG AAGGGCAATGGACGGTGTGCAGCAGCCCCACGAAAAATCATGTCGAAGCA TGGAAGCGATCAAGCATCAGAATCCCCCCTTCGCGTCTGTTGTGCATGAC ATTCTAGCAGCGTTTGTTTTTACTTGGGGTTCCGTTCGTGTTCGCCAATG CCCCCTGCAAGCACCAGCTCACCCTCGTCTTGCCGTTCTAGGTATTACAG CAGCAGCGCTTACAACGCTTGCGCATCGCATCGGTGGTCGTTGTCCCGTT CAGCCCCCCCCCCCCCCCTTATTATCGGATTCTTCTTGTCATTGACGACC CCCCCTCGGCGGAGCGCAGGCTGTCGGAGTTAGAGGAGGCCCTTGCAGCA GACGGAGGGGACGACCCCGCGTCGGTGCTTGGGCGGTTCGCCTCAGGGGC GGGCGATCCGGCTTCCTCTATGCTGGCGCAGGCAAGGCCCCACCATAAGC GGCACGTGGCGGCCACAGCTGTTGTTGTGCCCCTGCTTTGTGTTCGTTGG CGTTGCTCGTCACTTTGCATTCACCGCGAGGGATTTCGTCGGTTTTTGTA TGCGGCTGTTGCTGCTGATGCGGTACCAGCACCACGGGTGCCCCTTCATG CGCCCATGAGTGAGTGTTCATGCAGCGCCCGTAGGTCGATCCACCTTGCG TGCGCCAGCACTTGCTGCATTGAAGTGGAAACCTTCGCTTGCTGCAGTTC TTGCTCCTAGGGCATCTTTAGAACAAAACACAGCAGTCAGGATGTCTTGT CAGAGAAAGTGTCGGCAACCTAGACACAGGATGAGCCCCTTTGGCCCATC CAACACCATTTGTACACCAACGCCGTAGTCTACTGCGGTTTCAGGTGATG TTTTGTTTATTCCAATTGGAGTAGCACTATGTACCTTGCGCCTGATTGGT GCCGAAACGTGACCCTTGGGGCCCCGCGGATGGTTCTACAGTACTAGCGA CGAGACAAACCGCAGAACCACGGCAGCACGGCATGTTTGGAAGGTTACCT CCCTACACGCAGAAACAGGTCCGACTCCGGTTGCTGACTAATAATGTCGA CTTTGCCGCTGACTAATAATGTCGACTTTGCCGCGGCTGCGAGTGATCTG CTTTGTGTTCCGTCCCTTCTATCTTTCTTCACGGCCCTCTTAGATGTACA ACGCGCTGGGCAGCGGCGCGCACAGTTGTAGGCGCGCACAGTTGTAGGCG CTCCGTCGTCTGTGTTACTCGGTGTATCGTCTGCTTTGTTTCCATCTCAA TACAACGCGTCTGTTGACTCCCTCCTTCCACCCCGCCCCTTCCCACGTCG AGCGCAGAACAAGCGCTGGATCGACGAAGCGTTCGGCGGAGTCCCCTCGG TCGAGGAAATCGTGCTGCGCCTGAGGGGGATGGTCGCCGAGGCTTCCGGC GGCCGGGAGTGGGCGCAGGGCGCGCTGGAAAGCCTCGCGAAGGCCTCCCC CACCGCTCTCAAGGTGCGATTGTTAAAATGTAACCTTAGCTTTGGTATGG AAAGCAACTTTGCTTGGTCGTGTCTGGCAATGGAACAGCGTGTGGAGGCT CACAGAGTGCTGAAAAGTACACTTTGTGTGTAGACCAGAAAATATCGCTT GGACTGGCGCTTAGTGGACCAAAAGGACTTGCCGTTTGTCCTCCCCCGCC GCGCCAAAGCCATGTACTCCGCCGCTTTTGTCCAGCATTCGTTTTCGCGT TGGGCGTGGGCGGCACAAACTGTTCGGCCTTCCAATGCGTAGACTCTGTA GCATAAGGGTTTTATCAAGTCTTTCCGCCCGAAACGGTAGGTGCTTACGA CGTGCTGCTATGCTGTTCGCCTGACGGCATGTTCAAGCGTTCCGTGTTGC CGACTTTCTTCCAAATTGTTCGGGGGGCTCCTTCCTGACCCCCTGTGTCT GTGTGGACCCCCCACCCCGCGTGTTCCTCGCTTCTAACTGCCGTTTCGCC TCGCCGTCAGGTGACTCACCGGCATATCTCGTGGGCAGCCACGACTACCC TGAAGGACTGCCTAGAACAGGACTTCCGCGTCATGCAGGTGGGTTTTATA TGCCGAGGGACTGTTTGGTACTGCCTGTTGAGCAGGCCTGCCTCTTAGTA TATCATCAACGCCTTGGTGGTTCTCCTGGCTGCTCTTTGGGGGCCACACA TTGGCCTGGCGTTTGTACAGGCAGGCTTGGCACTTCAACGAAAACTTGCG GGTGATTATTATGTAGTTCGAAGGATATATATTGTGACTCGGCGGCGCAG AGCTTGCTTCCGGGGGCACATCGAATGAGACTTGAGACTTGTACAGTACA GCACGTGGGCCTCTCGGCCATCGCTTTCTTCCCCCATCTCCCTCCCAACC TCCGTGTTTGTCGAGCATCTCACCGCTGGTGTAATATGTTCCTTTGTTTT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGAGACCG GGTCTTGGCTTAGTTGGAGCCCAGATTGAAGTACAAACGGCCGCAATACG TTCGAGTAAAACGACGGCACGTGTCCCGAATGAGAAGTAGCGCGTGATAC GTTCACAGTGGACAGTGTTCACAGGGTTCTCTCTCTTCCGTCACGGGGGT GGTTTAGACTAAAGACCGGGTGCATGGTAGGCAAGTCTCAGGTACGAGAC CGCCTCCTTGAAGAATCGCAACTGCTGCCTCTTCGTCGAAGCTTGCGGCT TAACCACCGACGCTTCGAAAACCCTGTAGGACCGATGAGGGAGCGTCCGA CCGCTCTGGATCCCCGTCCATATGGTCTGTGTCTAATGGTTATGTTGACG CTAGTATCGCGATCAACTCAGTAAGGAATATCACGTATTCGGATTCAGTC ATGGCATCATGGAAAAATAGTGTATCCACACACACAGGCTGCCATAACAA TGGCGCAAACGGTCGGCCGTTCTGTGCTCCTCTTCATATTTTCTCACCCT GTGGTAGAAGATGACTCTTTCTCTCTCCTGTTCTGCACAGAAACACTAAT CAATCGCACGCACAAGGCCCGCTATGGATGGCGATGACGACGACGGGCAA TGGACGAGGTGAACGCTTCCATCGACGCCCCTTCCCACTTCCCCTCCCCC TTCCTGCTTCCTCGCTGCTGCCGTCCAGCACATGGCGATGAACGGGGATT TCGACGAAGGCGTGCGGGCTCTGCTCATCGACAAGGACAACCAACCGGCG TGGTCACCGCCCACCCTGGAAGGAGTCGCCGACTCAAGAGTACAGGAGCT GTTTTCGGAGATCGAGGCCGGCGAAACCGTTTTCTGA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1089:22870..26806-

>mRNA_Ecto-sp9_F_contig1089.773.1 ID=mRNA_Ecto-sp9_F_contig1089.773.1|Name=mRNA_Ecto-sp9_F_contig1089.773.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1380bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1089:22870..26806- (Ectocarpus species9 EcSCA_722f female)
CCGAGACCAGTGATCGGGCTATTCCCCGACGTTGGCACGGCGCACGTTCT
CTCCAGGCTGCCTGGGGGGCTGGGGCAGTACCTGGGCTTGACGGGTGCAA
GGCTGCGGGGGAACGACCTGTTGCATTGCGGCCTCGCCACTCACCTCGTG
CCTAGAGACAGCCGAGACCAGTGATCGGGCTATTCCCCGACGTTGGCACG
GCGCACGTTCTCTCCAGGCTGCCTGGGGGGCTGGGGCAGTACCTGGGCTT
GACGGGTGCAAGGCTGCGGGGGAACGACCTGTTGCATTGCGGCCTCGCCA
CTCACCTCGTGCCTAGAGACAGGCTGTCGGAGTTAGAGGAGGCCCTTGCA
GCAGACGGAGGGGACGACCCCGCGTCGGTGCTTGGGCGGTTCGCCTCAGG
GGCGGGCGATCCGGCTTCCTCTATGCTGGCGCAGGCAAGGCCCCACCATA
AGCGGCACGCTGTCGGAGTTAGAGGAGGCCCTTGCAGCAGACGGAGGGGA
CGACCCCGCGTCGGTGCTTGGGCGGTTCGCCTCAGGGGCGGGCGATCCGG
CTTCCTCTATGCTGGCGCAGGCAAGGCCCCACCATAAGCGGCACAACAAG
CGCTGGATCGACGAAGCGTTCGGCGGAGTCCCCTCGGTCGAGGAAATCGT
GCTGCGCCTGAGGGGGATGGTCGCCGAGGCTTCCGGCGGCCGGGAGTGGG
CGCAGGGCGCGCTGGAAAGCCTCGCGAAGGCCTCCCCCACCGCTCTCAAG
AACAAGCGCTGGATCGACGAAGCGTTCGGCGGAGTCCCCTCGGTCGAGGA
AATCGTGCTGCGCCTGAGGGGGATGGTCGCCGAGGCTTCCGGCGGCCGGG
AGTGGGCGCAGGGCGCGCTGGAAAGCCTCGCGAAGGCCTCCCCCACCGCT
CTCAAGGTGACTCACCGGCATATCTCGTGGGCAGCCACGACTACCCTGAA
GGACTGCCTAGAACAGGACTTCCGCGTCATGCAGGTGACTCACCGGCATA
TCTCGTGGGCAGCCACGACTACCCTGAAGGACTGCCTAGAACAGGACTTC
CGCGTCATGCAGCACATGGCGATGAACGGGGATTTCGACGAAGGCGTGCG
GGCTCTGCTCATCGACAAGGACAACCAACCGGCGTGGTCACCGCCCACCC
TGGAAGGAGTCGCCGACTCAAGAGTACAGGAGCTGTTTTCGGAGATCGAG
GCCGGCGAAACCGTTTTCTGACACATGGCGATGAACGGGGATTTCGACGA
AGGCGTGCGGGCTCTGCTCATCGACAAGGACAACCAACCGGCGTGGTCAC
CGCCCACCCTGGAAGGAGTCGCCGACTCAAGAGTACAGGAGCTGTTTTCG
GAGATCGAGGCCGGCGAAACCGTTTTCTGA
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