mRNA_Ecto-sp9_F_contig1087.757.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1087.757.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKJ0_ECTSI) HSP 1 Score: 295 bits (754), Expect = 8.090e-101 Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 1
Query: 1 MTRQTASEDLSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEYINMV 459
MTRQTASEDLSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEYINM+
Sbjct: 1 MTRQTASEDLSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEYINMM 153
BLAST of mRNA_Ecto-sp9_F_contig1087.757.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC57_AURAN) HSP 1 Score: 228 bits (581), Expect = 1.600e-74 Identity = 112/144 (77.78%), Postives = 135/144 (93.75%), Query Frame = 1
Query: 28 LSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEYINMV 459
LS ELAEFREIF+LVDRDGGGT+TKEELGELMDTLGI+ATPEE+DLMI EIDQDNNGEIDFEEFVAVMSRKV+A+YTADQVK+AFKVFEG++P GHIK++ +++ALT G+++LT+EQAHDLVSQLEPD +G++NY EY+NM+
Sbjct: 5 LSNEELAEFREIFNLVDRDGGGTITKEELGELMDTLGIDATPEEIDLMIHEIDQDNNGEIDFEEFVAVMSRKVSATYTADQVKNAFKVFEGDAPSGHIKVDVLIRALTNDGTDKLTDEQAHDLVSQLEPDRSGLINYSEYVNMM 148
BLAST of mRNA_Ecto-sp9_F_contig1087.757.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUG4_9STRA) HSP 1 Score: 228 bits (581), Expect = 2.160e-74 Identity = 115/156 (73.72%), Postives = 141/156 (90.38%), Query Frame = 1
Query: 1 MTRQTASED---LSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEYINMV 459
M+ + +SED L+ E+AEFREIF LVDRDGGGT+TK ELG+LMDTLGIEAT EE++LM+ EIDQDNNGEIDF+EFVAVMSRKVNASYT +QVK AFKVFEG++P G+IK+ES+++ALTTYG+E+LTEEQA +LVSQLEPDHNG+VNYVEY+N++
Sbjct: 1 MSTRASSEDAYQLTAEEVAEFREIFSLVDRDGGGTITKVELGDLMDTLGIEATAEEIELMVAEIDQDNNGEIDFQEFVAVMSRKVNASYTPEQVKGAFKVFEGSAPSGYIKMESLVRALTTYGTEKLTEEQARELVSQLEPDHNGMVNYVEYVNIM 156
BLAST of mRNA_Ecto-sp9_F_contig1087.757.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1LFC1_HETAK) HSP 1 Score: 223 bits (569), Expect = 1.710e-72 Identity = 109/149 (73.15%), Postives = 138/149 (92.62%), Query Frame = 1
Query: 13 TASEDLSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEYINMV 459
T + +LS EL EFREIF+LVDRDGGG++TKEELG+LMDTLGI+A+PEE+DLMI+EIDQDNNGEIDF EFVAVMSRKVNA+YT++QVK+AF+VFEG SPPG+IK++++ KAL TYG+E+LT+EQA +LVSQLEPD +G++NYVEY+NM+
Sbjct: 14 TRTLNLSEEELQEFREIFNLVDRDGGGSITKEELGDLMDTLGIDASPEEIDLMINEIDQDNNGEIDFNEFVAVMSRKVNATYTSEQVKNAFRVFEGASPPGYIKVDALAKALQTYGAEKLTDEQARELVSQLEPDAHGLINYVEYVNMM 162
BLAST of mRNA_Ecto-sp9_F_contig1087.757.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SL49_9STRA) HSP 1 Score: 219 bits (558), Expect = 5.270e-71 Identity = 106/144 (73.61%), Postives = 134/144 (93.06%), Query Frame = 1
Query: 28 LSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEYINMV 459
L+P ELAEFREIF+LVD+DGGGT++KEELGELM+TLGI+ATPEE+DLMI EID+DNNG IDF+EFVAVMSRKV+A+YTA+QV+ AF+VFE +PPGHIK+ES+++ALTT GS++L+EEQA DLV+QLEPD +G+VNY EY+NM+
Sbjct: 5 LTPEELAEFREIFNLVDKDGGGTISKEELGELMETLGIDATPEEIDLMIAEIDEDNNGVIDFDEFVAVMSRKVSATYTAEQVRGAFRVFESGAPPGHIKVESLVRALTTDGSDKLSEEQARDLVAQLEPDRDGLVNYKEYVNMM 148
BLAST of mRNA_Ecto-sp9_F_contig1087.757.1 vs.
Match: Uncharacterized (protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BG90_SAPPC) HSP 1 Score: 208 bits (529), Expect = 1.330e-66 Identity = 101/147 (68.71%), Postives = 131/147 (89.12%), Query Frame = 1
Query: 19 SEDLSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEYINMV 459
+++LS TE+ EFREIF+LVDRD GG++TK ELGELMDTLGI +PEE+DLMI+EIDQD+NGEIDF+EFVAVMSRKVNA+Y+ADQVK++FK+FE S PG I++E ++ ALTTYGS++++EEQA +L+ QLEPD NG+VNY EY+NM+
Sbjct: 2 TQELSETEITEFREIFNLVDRDRGGSITKVELGELMDTLGINTSPEEIDLMINEIDQDSNGEIDFDEFVAVMSRKVNATYSADQVKASFKMFENPSTPGCIRVERLVSALTTYGSDKISEEQARELICQLEPDSNGLVNYEEYVNMM 148
BLAST of mRNA_Ecto-sp9_F_contig1087.757.1 vs.
Match: Aste57867_11938 (protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KUA7_9STRA) HSP 1 Score: 202 bits (514), Expect = 2.560e-64 Identity = 98/145 (67.59%), Postives = 127/145 (87.59%), Query Frame = 1
Query: 25 DLSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEYINMV 459
+LS E+AEFREIF+LVDRD GG++TK ELGELMDTLGI +PEE+DLMI+EIDQD+NGEIDF+EFVAVMSRKVNA+Y+ADQVK +F++FE + PG IK++ + +ALT YGS++L+ EQA +L+SQLEPD NG++NY EY+NM+
Sbjct: 4 ELSENEIAEFREIFNLVDRDRGGSITKAELGELMDTLGINTSPEEIDLMINEIDQDSNGEIDFDEFVAVMSRKVNATYSADQVKMSFRMFENPNTPGFIKVDRLHRALTMYGSDKLSSEQASELISQLEPDSNGMINYEEYVNMM 148
BLAST of mRNA_Ecto-sp9_F_contig1087.757.1 vs.
Match: Uncharacterized (protein n=21 Tax=Oomycota TaxID=4762 RepID=H3H091_PHYRM) HSP 1 Score: 201 bits (512), Expect = 5.320e-64 Identity = 100/145 (68.97%), Postives = 128/145 (88.28%), Query Frame = 1
Query: 28 LSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGN-SPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEYINMV 459
LS EL EFREIF+LVDRD GG++TK ELGELMDTLGI+ +PEE+DLMI+EIDQD+NGEIDF+EFVAVMSRKVNA+YT++QVK+AFK FEGN S PG IK + ++ ALTTYG+++++ +QA +L+SQLEPD +G +NYVEY+NM+
Sbjct: 5 LSSEELIEFREIFNLVDRDRGGSITKVELGELMDTLGIDTSPEEIDLMINEIDQDSNGEIDFDEFVAVMSRKVNATYTSEQVKTAFKAFEGNASAPGFIKADKLLIALTTYGADRISSDQAQELISQLEPDQHGNINYVEYVNMM 149
BLAST of mRNA_Ecto-sp9_F_contig1087.757.1 vs.
Match: Hypothetical (protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDX7_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.690e-63 Identity = 99/144 (68.75%), Postives = 126/144 (87.50%), Query Frame = 1
Query: 28 LSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEYINMV 459
L+ ELAEFREIF+LVD+DGGGT++K+EL ELM+TLGI A+PEEV+LMI+E+D+D +GEIDFEEFVAVMSRKVN+SYT DQVK+AFK+FEG +P G+IK+ ++ ALTTY SE +TE QA +L+SQLEPD NG+VNY EY+ M+
Sbjct: 20 LTDEELAEFREIFNLVDKDGGGTISKDELLELMETLGINASPEEVELMINEVDEDQSGEIDFEEFVAVMSRKVNSSYTPDQVKAAFKIFEGTAPSGYIKVGDLLTALTTYCSETVTEAQAAELISQLEPDTNGLVNYAEYVTMM 163
BLAST of mRNA_Ecto-sp9_F_contig1087.757.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4J2_9STRA) HSP 1 Score: 196 bits (498), Expect = 4.870e-62 Identity = 97/140 (69.29%), Postives = 120/140 (85.71%), Query Frame = 1
Query: 28 LSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATPEEVDLMIDEIDQDNNGEIDFEEFVAVMSRKVNASYTADQVKSAFKVFEGNSPPGHIKIESVMKALTTYGSEQLTEEQAHDLVSQLEPDHNGVVNYVEY 447
LS E++EFREIF+LVD+DGGG++TK EL +LMDTLGI+A+PEE+D MI EIDQD NG+IDFEEFV VMSRKVNA+YT+DQVK AFKVFE + PGHIK E+++KAL TYG+E+LTE+QAH+LV QLE D G +NY +Y
Sbjct: 1 LSAEEISEFREIFNLVDKDGGGSITKVELADLMDTLGIDASPEEIDAMIFEIDQDGNGDIDFEEFVTVMSRKVNATYTSDQVKGAFKVFEAQANPGHIKAEALIKALCTYGTEKLTEDQAHELVGQLEVDAAGYINYSDY 140 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1087.757.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1087.757.1 >prot_Ecto-sp9_F_contig1087.757.1 ID=prot_Ecto-sp9_F_contig1087.757.1|Name=mRNA_Ecto-sp9_F_contig1087.757.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=153bp MTRQTASEDLSPTELAEFREIFDLVDRDGGGTVTKEELGELMDTLGIEATback to top mRNA from alignment at Ecto-sp9_F_contig1087:10452..13219- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1087.757.1 ID=mRNA_Ecto-sp9_F_contig1087.757.1|Name=mRNA_Ecto-sp9_F_contig1087.757.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2768bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1087:10452..13219- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1087:10452..13219- >mRNA_Ecto-sp9_F_contig1087.757.1 ID=mRNA_Ecto-sp9_F_contig1087.757.1|Name=mRNA_Ecto-sp9_F_contig1087.757.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=918bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1087:10452..13219- (Ectocarpus species9 EcSCA_722f female)back to top |