mRNA_Ecto-sp9_F_contig10863.752.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10863.752.1
Unique NamemRNA_Ecto-sp9_F_contig10863.752.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10863.752.1 vs.
Match: N/a (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP43_ECTSI)

HSP 1 Score: 598 bits (1543), Expect = 2.970e-208
Identity = 302/325 (92.92%), Postives = 311/325 (95.69%), Query Frame = 1 
Query: 1345 MHGSVEQSFRGSDDFTPSVVEVFVDTSFGMTYTGNDYGSATIVADDAFVYHADFTDLPYIDIGGLYDWDFCFANVGGKAESDKYTHLSLHKSEVSTPFRTDFGLAEGNTTVYLTYANTEDNSLYIDASLTISETTADIAFDHAKSAVMYSTSDALETLTWTKNDDGKFEVATAQHLLQIMNQGTMFTDLGDYPNNYDDASDIYHVEEGLHDISKVGFEVPASIVNVIFATGDIVEVDMAFERETTMKTTFVKNGDLLEIGDVDALLLPFDLHTSETQESSMKLSDDTVVTVSVAQGSGEISVGGETYESGKSLVMDGKKCTVYDI 2319
            MHGSVEQSFRG D+FTPSVVEVFVDTSFGMTYTGNDYGSAT+VADDAFVYHADFTDLPYIDIGGLY WDF FANVGGKA  DKYTHLSLH SEVSTP  TDFGLAE NTTVYLTYANTEDNSLYIDASLTISETTADIAFDHAKSAVMYSTSDALETLTWTKNDDGKFEVATAQHLLQIMNQGTMFTDLGDYP+NYDDASDIYHVEEGL DISKVGFEVPAS+VNV+FATGDIVEVDMAFERETTMKTT VKNGDL+EI DV+ALLLPFDL TSETQESS+KLSDDTVVTVSVAQGSGEISVGG+TYESGKS VMDGKKCTVYDI
Sbjct:    1 MHGSVEQSFRGHDEFTPSVVEVFVDTSFGMTYTGNDYGSATMVADDAFVYHADFTDLPYIDIGGLYAWDFVFANVGGKAAFDKYTHLSLHTSEVSTPLYTDFGLAETNTTVYLTYANTEDNSLYIDASLTISETTADIAFDHAKSAVMYSTSDALETLTWTKNDDGKFEVATAQHLLQIMNQGTMFTDLGDYPSNYDDASDIYHVEEGLRDISKVGFEVPASLVNVVFATGDIVEVDMAFERETTMKTTLVKNGDLVEIEDVNALLLPFDLSTSETQESSLKLSDDTVVTVSVAQGSGEISVGGQTYESGKSFVMDGKKCTVYDI 325
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10863.752.1 vs.
Match: EsV-1-1 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI)

HSP 1 Score: 530 bits (1364), Expect = 9.300e-180
Identity = 266/303 (87.79%), Postives = 276/303 (91.09%), Query Frame = 1 
Query:    1 VVQGQTPLHLATGKGFCDGMVALINAGANVDSRMSNGSTAMYIAACTGNLEAVKILLQEKANPLLCVGPTHPLDIATHGGHLGIVQELVQRFGEDGCSDEDAIGALETAAYENHPIILTFLLDAGVIDTDGTALCDAIEGRSEACLKLLVSRRGGNAHMAESYYTNIDNACENALVYAFGTGRGYAPRMTRFLLDHGADTKKKVRFEIEGLGEIAGGPLVAAKIILRHEQTHFEDADEARVDGLKGVVRLFRQEDAVHANSWAWPIDTDRATKIVHKP----IRPGPRPKVLLAAMASSTGDC 897
            VVQGQTPLHLATG+GFCDGMVALI+AGANVDSRMSNGSTAMYIAACTGNL+AVKILLQE+ANP+LCVGPTHPLDIATHGGHLG+VQELVQRFG DGCSDE AIGALETAAYENH  ILTFLLDAGV DTDGTALCDAIEGRSEACLKLLV RRGGNAHMAES+YTN D+AC+NALV AFG GRGYAPRMTRFLLDHGADTKKKVRFEI+GLGEIAGGPLVAAKIILRHEQTHFEDADE  VDGLK VVRL RQEDAVHANSWAWPIDTDRATKIV K     I PGPRP VLLAAM      C
Sbjct:  111 VVQGQTPLHLATGEGFCDGMVALIDAGANVDSRMSNGSTAMYIAACTGNLDAVKILLQERANPMLCVGPTHPLDIATHGGHLGVVQELVQRFGVDGCSDEGAIGALETAAYENHQTILTFLLDAGVKDTDGTALCDAIEGRSEACLKLLVGRRGGNAHMAESHYTNTDSACDNALVCAFGAGRGYAPRMTRFLLDHGADTKKKVRFEIKGLGEIAGGPLVAAKIILRHEQTHFEDADEEGVDGLKEVVRLLRQEDAVHANSWAWPIDTDRATKIVRKTPAFKIHPGPRPCVLLAAMGRCVEWC 413
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10863.752.1 vs.
Match: Uncharacterized (protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)

HSP 1 Score: 493 bits (1269), Expect = 2.470e-165
Identity = 247/299 (82.61%), Postives = 265/299 (88.63%), Query Frame = 1 
Query:    1 VVQGQTPLHLATGKGFCDGMVALINAGANVDSRMSNGSTAMYIAACTGNLEAVKILLQEKANPLLCVGPTHPLDIATHGGHLGIVQELVQRFGEDGCSDEDAIGALETAAYENHPIILTFLLDAGVIDTDGTALCDAIEGRSEACLKLLVSRRGGNAHMAESYYTNIDNACENALVYAFGTGRGYAPRMTRFLLDHGADTKKKVRFEIEGLGEIAGGPLVAAKIILRHEQTHFEDADEARVDGLKGVVRLFRQEDAVHANSWAWPIDTDRATKIVHKPIRPGPRPKVLLAAMASSTGDC 897
            VVQGQTPLHLA G+GFC+GMVALINAGANVDSRMS+GSTAMYIAAC GNLEAV+IL Q+KANPLL VGPTHPLDIATHGGHLG+VQELVQRFG DGC+DE AIGALETAAYENH  I+TFLLDAGVIDTDGTALCDAIEGR+EACLKLLVSRRGG+ HM E  YTNIDNA EN L+ AFGTGRG+APR+TRFLLDHGADTK KVRF IEGLGE+   PLVAAKI LRHEQT+F+DAD  RVDGLKGVVRL +QE AVHANSWAWP DTDRATKIV KPIRPG RP+VLLAAM      C
Sbjct:  124 VVQGQTPLHLAAGEGFCEGMVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGVIDTDGTALCDAIEGRNEACLKLLVSRRGGSEHMVERNYTNIDNARENPLLCAFGTGRGHAPRITRFLLDHGADTKNKVRFGIEGLGEMIDEPLVAAKITLRHEQTYFKDADVDRVDGLKGVVRLLQQEAAVHANSWAWPTDTDRATKIVRKPIRPGSRPEVLLAAMGRCVEWC 422
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10863.752.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 5.460e-58
Identity = 135/295 (45.76%), Postives = 183/295 (62.03%), Query Frame = 1 
Query:   52 DGMVALINAGANVDSRMSNGSTAMYIAACTGNLEAVKILLQEKANPLLCV--GPTHPLDIATHGGHLGIVQELVQRFGEDGCSDEDAIGALETAAYENHPIILTFLLDAGVIDTDGTALCDAIEGRSEACLKLLVSRRGGNAHMAESYYTNIDNAC-----------ENALVYAFGTGRGYAPRMTRFLLDHGADTKKKVRFE-IEGLGEIAGGPLVAAKIILRHEQTHFEDADEARVDGLKGVVRLFRQEDAVHANSWAWPIDTDRATKIVHKPIRPG-----PRPKVLLAAMA 879
            DGMV LI+AGANVDS   +G+T +Y +A  G LE VK+L+  KANPL+    G + PLD A   G+LG+V+ELVQRFG DGCS +    AL  AA +N   I+TFL D GV+D +G ALC A+EGR E  +KLL+ R+G NA+ +   Y N+ +             +  LV AF  G  Y+PR+TR LLD GAD   +VR+E IEG   +   PL  A+ IL   +T+ E +++    GLKGV+RL +Q DAVHA SW WP   +++T IV   + PG      +P+V+LAA++
Sbjct:   96 DGMVVLIHAGANVDSEQESGATPLYTSARQGRLEDVKVLVGTKANPLVPAYDGESLPLDAAAENGYLGVVRELVQRFGIDGCSRDGGAQALVEAASQNQTDIVTFLFDNGVVDAEGIALCAAVEGRREEFVKLLLRRQGCNANTSTRAYANMAHDSTLPMYSNQLFQDTPLVSAFELGGFYSPRITRLLLDAGADVASRVRYEGIEGDCVMHDTPLAIAESILPLWETYGETSEDVEF-GLKGVIRLLKQVDAVHAISWCWPNALEKSTPIVR--MLPGLKRRATKPRVVLAALS 387
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10863.752.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 8.210e-50
Identity = 125/309 (40.45%), Postives = 168/309 (54.37%), Query Frame = 1 
Query:   10 GQTPLHLATGKGFCDGMVALINAGANVDSRMSNGSTAMYIAACTGNLEAVKILLQEKANPLLCV--GPTHPLDIATHGGHLGIVQELVQRFGEDGCSDEDAIGALETAAYENHPIILTFLLDAGVIDTDGTALCDAIEGRSEACLKLLVSRRGGNAHMAESYYTNIDNAC-----------ENALVYAFGTGRGYAPRMTRFLLDHGADTKKKVRFE-IEGLGEIAGGPLVAAKIILRHEQTHFEDADEARVDGLKGVVRLFRQEDAVHANSWAWPIDTDRATKIVHKPIRPG-----PRPKVLLAAMA 879
            G TPLH+A  KGF  GMV LI+AG                         VK  +  KANP+L    G + PLD+A   G LG+V+EL QRFG DGCS +    AL  AA +N   I+TFL D GV+D +G ALC A+EGR E C++LL+  +G NA+     Y N+ +             +  LV AF  G  Y+PR+TR LL  GAD   +VR+E IEG   +   PL  A+  L   +T+ E +++    GLKGV+RL +Q DAVHA SW WP   +++T IV   + PG      +P+V LA ++
Sbjct:  103 GCTPLHVAAAKGFHKGMVMLIHAG-------------------------VKGFVGAKANPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGVVDAEGIALCAAVEGRREECIELLLRTQGCNANAIARAYANMTHDTTLPMYSNQLFPDTPLVSAFELGGFYSPRITRLLLGAGADVASRVRYEGIEGDCVMHDTPLTIAESTLPLWETYGETSEDVEF-GLKGVIRLLKQVDAVHATSWCWPSALEKSTPIVR--MLPGLKRRATKPRVALAPLS 383
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10863.752.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 1.740e-43
Identity = 113/268 (42.16%), Postives = 146/268 (54.48%), Query Frame = 1 
Query:  169 LQEKANPLLCVGPTHPLDIATHGGHLGIVQELVQRFGEDGCSDEDAIGALETAAYENHPIILTFLLDAGVIDTDGTALCDAIEGRSEACLKLLVSRRGGNAHMAESYYTNIDNAC-----------ENALVYAFGTGRGYAPRMTRFLLDHGADTKKKVRF-----EIEGLGEIAGGPLVAAKIILRH---EQTHFEDADEARVDGLKGVVRLFRQEDAVHANSWAWPIDTDRATKIVHK----------PI--RPGPRPKVLLAAMA 879
            L+  ANPLL    + PL  A + GHL +V ELV  +G D C+++  + AL TAA   H  I+TFL DAGV+DT+G ALC AIEG SEAC+ LL+ R+GGN +++   Y N+ +             E  LV  F  G  +APR  R LL+ GAD    VRF     E E   +  G PL  A    R     + H E      V GLKGV+RL RQE+AVHA SW WPIDT R+ +   +          P+  R   +P+VLLAAM+
Sbjct:  148 LRANANPLLSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNINVSTRAYVNMAHGTLPETYDDFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEDFIGTPLELATSYFRRFSPMRVHRE-----MVRGLKGVIRLLRQEEAVHAVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAAMS 410
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10863.752.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 4.370e-39
Identity = 101/233 (43.35%), Postives = 131/233 (56.22%), Query Frame = 1 
Query:  181 ANPLLCVGPTHPLDIATHGGHLGIVQELVQRFGEDGCSDEDAIGALETAAYENHPIILTFLLDAGVIDTDGTALCDAIEGRSEACLKLLVSRRGGNAHMAESYYTNIDNAC-----------ENALVYAFGTGRGYAPRMTRFLLDHGADTKKKVRFEIEG-LGE----IAGGPLVAAKIILRHEQTHFEDADEARVDGLKGVVRLFRQEDAVHANSWAWPIDTDRATKIVHK 831
            ANPLL    + PL +A + GHL +V+ELV  +G D C+ +    AL TAA   H  I+ FL +AGV+DT+G ALC AIEG SEAC+ LL+ R+GGNA+     Y N+D+             E  LV  F  G  +APR  R LL+ GAD    VRF  +   GE      G PL  A   +R   T     +  R  GLKGV+RL +QE+AVH+ SW WPIDT R+ + V +
Sbjct:  573 ANPLLSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYVRRFSTMKVHREMVR--GLKGVIRLLQQEEAVHSVSWTWPIDTGRSAERVSR 803
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10863.752.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.180e-24
Identity = 89/274 (32.48%), Postives = 138/274 (50.36%), Query Frame = 1 
Query:   16 TPLHLATGKGFCDGMVALINAGANVDSRMSNGSTAMYIAACTGNLEAVKILLQEKANPLLC--VGPTH----PLDIATHGGHLGIVQELVQRFGEDGCSDEDA-IGALETAAYENHPIILTFLLDAGVIDTDGTALCDAIEGRSEACLKLLVSRRGGNAHMAESYYTNIDNACENALVYAFGTGRGYAPRMTRFLLDHGADTKKKVRFEIEGLGEIAGGPLVAAKIILRHEQTHFEDADEARVDGLKGVVRLFRQEDAVHANSWAWPIDTDRAT 816
            TPL +A   G    M  L+ AGAN++SR  +G+T +++AA  GN++AV++LL  K +PLL   +G +     PLD+A   GHL +V EL+++ G  GC      + AL+ AA   H  +LT L +AGV+DT G A    I  R    L++ V    G  +   +        C    +  +   +   PR+ R L++ GADT   V   I+GL        +   ++L H+    E   E +++ L+ + RL  + +A+HA SW W  D    T
Sbjct:   19 TPLQIAAVNGCAASMTTLLEAGANLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDT-GLARGRRIWRRGP--LEVSVGAGKGEENHGWTCVCEHPQRCRFDAIACWH--QRCRPRVVRLLVEAGADTTSTV--PIDGLPGTDNITPMGLTMLLLHD-LGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCT 284
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10863.752.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE)

HSP 1 Score: 118 bits (296), Expect = 1.880e-24
Identity = 95/283 (33.57%), Postives = 123/283 (43.46%), Query Frame = 1 
Query:  256 QELVQRFGEDGCSDEDAIGALETAAYENHPIILTFLLDAGVIDTDGTALCDAI-----------------------------------------------EGRSEACLKLLVSRRGGNAHMAESYYTNIDNAC-----------ENALVYAFGTGRGYAPRMTRFLLDHGADTKKKVRFEIEG-LGE----IAGGPLVAAKIILRHEQTHFEDADEARVDGLKGVVRLFRQEDAVHANSWAWPIDTDRATKIVHK----------PI--RPGPRPKVLLAAMA 879
            +ELV  +G D C+ +    AL TAA   H  I+TFL DAGV+DT+G ALC AI                                               EG SEAC+ LL+ R+GGNA+     Y N+D+             E  LV  F  G  +AP   R LL+ GAD    VRF  +   GE      G PL  A    R   +         V  LKGV+RL RQE+AVH+ SW WPID  R+ +   +          P+  R   +P+VLLAA++
Sbjct:  184 RELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGVVDTEGVALCAAIXWRCTMDIWKWSASLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYDEFVFQETPLVSTFNLGSFHAPGFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSSM--SVHREMVPELKGVIRLLRQEEAVHSVSWTWPIDNGRSVERASRKKPTSIARMVPLLKRRAAKPRVLLAALS 464
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10863.752.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 8.210e-24
Identity = 86/256 (33.59%), Postives = 128/256 (50.00%), Query Frame = 1 
Query:   85 NVDSRMSNGSTAMYIAACTGNLEAVKILLQEKANPLLCVGPTH------PLDIATHGGHLGIVQELVQRFGEDGCSDEDA-IGALETAAYENHPIILTFLLDAGVIDTDGTALCDAIEGRSEACLKLLVSRRGGNAHMAESYYTNI-DNACENALVYAFGTGRGYAPRMTRFLLDHGADTKKKVRFEIE-GLGEIAGGPLVAAKIILRHEQTHFE--DADEARVDGLKGVVRLFRQEDAVHANSWAWPIDTDRATK 819
            N++SR S+G+T +Y AA  GN++A ++LL  KA+PLL   P        PLD A   GH  +V EL+++ G DGC      + AL+ AA   +  I+  L +AGV+DT G AL  A     E  LK L+ +      M E+ Y N  D      L++     + Y PR+ R L++ GADT   V    + G  +++  PL      +R +        A   ++  L+ + RL  + +AVHA SW WP D    T+
Sbjct:  140 NLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDT-GLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGI---QHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITR 391
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10863.752.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
N/a2.970e-20892.92n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
EsV-1-19.300e-18087.79n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
Uncharacterized2.470e-16582.61protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHA... [more]
Uncharacterized5.460e-5845.76protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized8.210e-5040.45protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.740e-4342.16protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.370e-3943.35protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
EsV-1-1991.180e-2432.48n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Uncharacterized1.880e-2433.57protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized8.210e-2433.59protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10863contigEcto-sp9_F_contig10863:1189..4311 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score534.6
Seed ortholog evalue7.4e-149
Seed eggNOG ortholog2880.D8LP44
KEGG koko:K10334
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG0504@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEsV-1-1 ankyrin-repeat protein
Ec32 orthologEc-06_006680.1
Exons2
Model size2322
Cds size2322
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928308.3875902-CDS-Ecto-sp9_F_contig10863:1188..26291622928308.3875902-CDS-Ecto-sp9_F_contig10863:1188..2629Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10863 1189..2629 -
1692277829.696323-CDS-Ecto-sp9_F_contig10863:1188..26291692277829.696323-CDS-Ecto-sp9_F_contig10863:1188..2629Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10863 1189..2629 -
1622928308.4041436-CDS-Ecto-sp9_F_contig10863:3430..43111622928308.4041436-CDS-Ecto-sp9_F_contig10863:3430..4311Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10863 3431..4311 -
1692277829.711565-CDS-Ecto-sp9_F_contig10863:3430..43111692277829.711565-CDS-Ecto-sp9_F_contig10863:3430..4311Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10863 3431..4311 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10863.752.1prot_Ecto-sp9_F_contig10863.752.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10863 1189..4311 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10863.752.1

>prot_Ecto-sp9_F_contig10863.752.1 ID=prot_Ecto-sp9_F_contig10863.752.1|Name=mRNA_Ecto-sp9_F_contig10863.752.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=774bp
VVQGQTPLHLATGKGFCDGMVALINAGANVDSRMSNGSTAMYIAACTGNL
EAVKILLQEKANPLLCVGPTHPLDIATHGGHLGIVQELVQRFGEDGCSDE
DAIGALETAAYENHPIILTFLLDAGVIDTDGTALCDAIEGRSEACLKLLV
SRRGGNAHMAESYYTNIDNACENALVYAFGTGRGYAPRMTRFLLDHGADT
KKKVRFEIEGLGEIAGGPLVAAKIILRHEQTHFEDADEARVDGLKGVVRL
FRQEDAVHANSWAWPIDTDRATKIVHKPIRPGPRPKVLLAAMASSTGDCG
GMMGMITYNATATNWRNLATFSNGLSGENVGGICGNFDGYGVTASNWLNA
MSGDINGQWSGGLIGYIRYGGSLQSLVNSMTGDIASTSQSAAGGVVGHIL
SSYTFDGQRWLNYMKGDITAPTGGGGIIGSFTRDRDTRDLPLLKSIVAMH
GSVEQSFRGSDDFTPSVVEVFVDTSFGMTYTGNDYGSATIVADDAFVYHA
DFTDLPYIDIGGLYDWDFCFANVGGKAESDKYTHLSLHKSEVSTPFRTDF
GLAEGNTTVYLTYANTEDNSLYIDASLTISETTADIAFDHAKSAVMYSTS
DALETLTWTKNDDGKFEVATAQHLLQIMNQGTMFTDLGDYPNNYDDASDI
YHVEEGLHDISKVGFEVPASIVNVIFATGDIVEVDMAFERETTMKTTFVK
NGDLLEIGDVDALLLPFDLHTSETQESSMKLSDDTVVTVSVAQGSGEISV
GGETYESGKSLVMDGKKCTVYDI*
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mRNA from alignment at Ecto-sp9_F_contig10863:1189..4311-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10863.752.1 ID=mRNA_Ecto-sp9_F_contig10863.752.1|Name=mRNA_Ecto-sp9_F_contig10863.752.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3123bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10863:1189..4311- (Ectocarpus species9 EcSCA_722f female)
GTAGTTCAAGGTCAGACACCCCTGCACTTGGCCACGGGAAAAGGGTTCTG
CGACGGGATGGTGGCACTGATCAACGCCGGTGCGAATGTCGACAGTCGCA
TGAGCAACGGATCAACGGCAATGTACATCGCCGCATGCACCGGCAACTTG
GAGGCGGTCAAGATTCTCCTACAGGAAAAGGCAAACCCCCTGCTATGCGT
CGGTCCAACGCATCCTCTCGACATTGCCACACACGGGGGACACCTGGGAA
TTGTACAGGAGCTTGTACAGAGATTCGGAGAGGATGGCTGTTCCGACGAA
GACGCCATAGGCGCCCTCGAGACAGCCGCATACGAAAATCACCCAATTAT
TCTGACGTTCCTACTCGACGCCGGTGTCATAGACACGGATGGTACGGCCC
TGTGTGATGCCATCGAGGGTCGCAGCGAGGCGTGTTTGAAGCTGTTGGTG
AGCCGTCGAGGGGGGAATGCTCACATGGCGGAGAGCTATTACACGAACAT
TGACAACGCCTGTGAGAATGCCCTCGTCTATGCCTTCGGTACGGGACGCG
GGTATGCTCCGAGGATGACGAGGTTCTTGCTTGACCACGGTGCCGATACG
AAGAAGAAAGTGCGTTTCGAAATAGAGGGGTTGGGTGAGATAGCAGGTGG
ACCTCTGGTAGCCGCCAAGATCATTCTACGGCACGAGCAGACCCACTTCG
AAGACGCAGATGAGGCGCGGGTGGACGGGTTAAAGGGAGTCGTTCGTCTC
TTTCGGCAGGAGGATGCAGTTCACGCCAACTCCTGGGCGTGGCCGATCGA
CACCGACCGCGCCACGAAAATCGTTCACAAGCCTATACGGCCCGGTCCGA
GGCCCAAGGTGCTGTTGGCGGCAATGGCCAGGTGCGTGGAGTGGTGTCAG
TAGGTTCAGGGTCAAGTAGGGAAACGTGTGAAAAAAAGACGACCTGATCC
CGATTATTCTCGTGTATCGCCGTCAGGTACATCAACAAACAAGACGGCGC
GTTCGGAGGGTAACGCAAGGACGACAAGAAGGGATGGTGTCAAGACAGCG
GATGCTCGTCTCTAACGATTGGTACATCATGGAAAATAAAATATTGCCTT
TGAATTATTGTTACAATTTGCAGCCATGTCTGTCACATGGACCAAGAGCG
CCGACAACAAGTTTGAGGTGGCGACCAAGGAGCACTTGCTACAGATTATG
AACCAAGGCGCGTTGTACACAGACAGCGGTGTATCACCCACCACTTACTG
GGGGTCTGACTAAGTGCAGACGAGCGACATCGACTTGGTGGACGATCACG
CGAGCATCCTTCCGATCGGGGACTCTACGACCACTTTTACAGGGGAATAC
GATGGAGGTCTTTTCCAAATCAAGAATTGGTCATATTCTAGCAGCAGTGT
ATTGTACCAGGGGTTGTTCGGGAAAGCGAGTTCTGCTACTCTGCAACGCA
TCCGCCTGTCGGGTGTTTGGACACTGAGTGGTTCACCGAGTGGTTCCGCG
TCAGCAACCGCTTTCATGTGCGGATACGTCACTTATGGAAGCGTTAATGA
TGTCGAGGGAGATTTTGCTGAAGGGACGGTCATGACTTCAACCGCAGATA
ATCGCGGCGCTTTGTTCGGCTCGGTCACCGGTTGCTCTCTCGACCATGTG
ACATTGCGTGGATCTGTGAACTTTGAATCCAGTTCCACTGGAGATTGTGG
GGGTATGATGGGGATGATCACGTACAACGCCACAGCCACTAATTGGCGCA
ATCTCGCAACATTTTCCAACGGCCTCAGTGGCGAAAATGTTGGTGGAATC
TGCGGAAATTTTGACGGTTATGGGGTGACGGCATCAAACTGGCTCAATGC
AATGAGTGGCGACATAAACGGGCAATGGTCCGGTGGGCTTATTGGTTACA
TTCGGTACGGCGGATCGTTGCAATCTCTCGTCAACAGCATGACAGGCGAT
ATCGCAAGCACGTCGCAGTCGGCTGCCGGAGGCGTGGTAGGGCACATACT
GTCAAGCTATACTTTTGATGGCCAAAGGTGGTTGAACTACATGAAGGGGG
ACATTACGGCACCGACGGGAGGCGGTGGAATCATCGGATCATTCACGAGA
GACAGAGACACACGCGATCTACCCCTCCTGAAATCTATCGTTGCGATGCA
CGGGAGCGTGGAACAGTCCTTCCGTGGTTCGGATGATTTCACGCCCTCCG
TGGTAGAAGTTTTCGTTGACACCAGTTTCGGCATGACTTACACCGGAAAC
GACTACGGGTCAGCGACGATAGTAGCGGACGACGCGTTCGTGTACCACGC
CGACTTCACCGACCTGCCTTACATTGACATAGGCGGGCTGTACGACTGGG
ACTTCTGTTTTGCGAATGTGGGAGGGAAGGCGGAGTCTGACAAGTACACG
CACCTAAGCCTGCACAAGTCTGAAGTTTCAACACCGTTCCGCACCGACTT
CGGGTTGGCAGAAGGTAACACAACGGTTTACCTCACGTACGCCAATACCG
AGGACAACTCGCTGTATATTGACGCCAGCCTAACCATCAGCGAGACCACT
GCCGACATCGCGTTTGATCATGCAAAATCGGCTGTCATGTACAGCACGTC
TGATGCCCTCGAGACGTTGACGTGGACCAAGAATGACGACGGCAAGTTTG
AGGTGGCGACAGCACAACATCTGTTGCAGATCATGAACCAGGGCACCATG
TTTACTGACTTGGGTGATTATCCAAACAACTATGATGATGCCAGCGACAT
TTATCACGTGGAAGAAGGACTCCATGACATATCCAAGGTCGGCTTCGAAG
TGCCGGCCTCGATAGTCAATGTGATCTTTGCCACTGGTGATATCGTGGAA
GTTGATATGGCTTTCGAAAGAGAAACAACCATGAAAACAACATTTGTGAA
GAACGGCGACTTGTTGGAAATTGGAGACGTGGACGCGCTTCTCCTACCAT
TCGATCTGCACACGTCAGAGACGCAAGAATCCAGCATGAAGCTCTCCGAC
GACACCGTCGTCACAGTGAGTGTCGCACAAGGATCGGGTGAAATATCGGT
CGGAGGAGAAACGTATGAGAGCGGAAAGTCGTTGGTGATGGATGGTAAAA
AATGTACAGTCTATGATATATAA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10863:1189..4311-

>mRNA_Ecto-sp9_F_contig10863.752.1 ID=mRNA_Ecto-sp9_F_contig10863.752.1|Name=mRNA_Ecto-sp9_F_contig10863.752.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=4644bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10863:1189..4311- (Ectocarpus species9 EcSCA_722f female)
GTAGTTCAAGGTCAGACACCCCTGCACTTGGCCACGGGAAAAGGGTTCTG
CGACGGGATGGTGGCACTGATCAACGCCGGTGCGAATGTCGACAGTCGCA
TGAGCAACGGATCAACGGCAATGTACATCGCCGCATGCACCGGCAACTTG
GAGGCGGTCAAGATTCTCCTACAGGAAAAGGCAAACCCCCTGCTATGCGT
CGGTCCAACGCATCCTCTCGACATTGCCACACACGGGGGACACCTGGGAA
TTGTACAGGAGCTTGTACAGAGATTCGGAGAGGATGGCTGTTCCGACGAA
GACGCCATAGGCGCCCTCGAGACAGCCGCATACGAAAATCACCCAATTAT
TCTGACGTTCCTACTCGACGCCGGTGTCATAGACACGGATGGTACGGCCC
TGTGTGATGCCATCGAGGGTCGCAGCGAGGCGTGTTTGAAGCTGTTGGTG
AGCCGTCGAGGGGGGAATGCTCACATGGCGGAGAGCTATTACACGAACAT
TGACAACGCCTGTGAGAATGCCCTCGTCTATGCCTTCGGTACGGGACGCG
GGTATGCTCCGAGGATGACGAGGTTCTTGCTTGACCACGGTGCCGATACG
AAGAAGAAAGTGCGTTTCGAAATAGAGGGGTTGGGTGAGATAGCAGGTGG
ACCTCTGGTAGCCGCCAAGATCATTCTACGGCACGAGCAGACCCACTTCG
AAGACGCAGATGAGGCGCGGGTGGACGGGTTAAAGGGAGTCGTTCGTCTC
TTTCGGCAGGAGGATGCAGTTCACGCCAACTCCTGGGCGTGGCCGATCGA
CACCGACCGCGCCACGAAAATCGTTCACAAGCCTATACGGCCCGGTCCGA
GGCCCAAGGTGCTGTTGGCGGCAATGGCCAGGTAGTTCAAGGTCAGACAC
CCCTGCACTTGGCCACGGGAAAAGGGTTCTGCGACGGGATGGTGGCACTG
ATCAACGCCGGTGCGAATGTCGACAGTCGCATGAGCAACGGATCAACGGC
AATGTACATCGCCGCATGCACCGGCAACTTGGAGGCGGTCAAGATTCTCC
TACAGGAAAAGGCAAACCCCCTGCTATGCGTCGGTCCAACGCATCCTCTC
GACATTGCCACACACGGGGGACACCTGGGAATTGTACAGGAGCTTGTACA
GAGATTCGGAGAGGATGGCTGTTCCGACGAAGACGCCATAGGCGCCCTCG
AGACAGCCGCATACGAAAATCACCCAATTATTCTGACGTTCCTACTCGAC
GCCGGTGTCATAGACACGGATGGTACGGCCCTGTGTGATGCCATCGAGGG
TCGCAGCGAGGCGTGTTTGAAGCTGTTGGTGAGCCGTCGAGGGGGGAATG
CTCACATGGCGGAGAGCTATTACACGAACATTGACAACGCCTGTGAGAAT
GCCCTCGTCTATGCCTTCGGTACGGGACGCGGGTATGCTCCGAGGATGAC
GAGGTTCTTGCTTGACCACGGTGCCGATACGAAGAAGAAAGTGCGTTTCG
AAATAGAGGGGTTGGGTGAGATAGCAGGTGGACCTCTGGTAGCCGCCAAG
ATCATTCTACGGCACGAGCAGACCCACTTCGAAGACGCAGATGAGGCGCG
GGTGGACGGGTTAAAGGGAGTCGTTCGTCTCTTTCGGCAGGAGGATGCAG
TTCACGCCAACTCCTGGGCGTGGCCGATCGACACCGACCGCGCCACGAAA
ATCGTTCACAAGCCTATACGGCCCGGTCCGAGGCCCAAGGTGCTGTTGGC
GGCAATGGCCAGTTCCACTGGAGATTGTGGGGGTATGATGGGGATGATCA
CGTACAACGCCACAGCCACTAATTGGCGCAATCTCGCAACATTTTCCAAC
GGCCTCAGTGGCGAAAATGTTGGTGGAATCTGCGGAAATTTTGACGGTTA
TGGGGTGACGGCATCAAACTGGCTCAATGCAATGAGTGGCGACATAAACG
GGCAATGGTCCGGTGGGCTTATTGGTTACATTCGGTACGGCGGATCGTTG
CAATCTCTCGTCAACAGCATGACAGGCGATATCGCAAGCACGTCGCAGTC
GGCTGCCGGAGGCGTGGTAGGGCACATACTGTCAAGCTATACTTTTGATG
GCCAAAGGTGGTTGAACTACATGAAGGGGGACATTACGGCACCGACGGGA
GGCGGTGGAATCATCGGATCATTCACGAGAGACAGAGACACACGCGATCT
ACCCCTCCTGAAATCTATCGTTGCGATGCACGGGAGCGTGGAACAGTCCT
TCCGTGGTTCGGATGATTTCACGCCCTCCGTGGTAGAAGTTTTCGTTGAC
ACCAGTTTCGGCATGACTTACACCGGAAACGACTACGGGTCAGCGACGAT
AGTAGCGGACGACGCGTTCGTGTACCACGCCGACTTCACCGACCTGCCTT
ACATTGACATAGGCGGGCTGTACGACTGGGACTTCTGTTTTGCGAATGTG
GGAGGGAAGGCGGAGTCTGACAAGTACACGCACCTAAGCCTGCACAAGTC
TGAAGTTTCAACACCGTTCCGCACCGACTTCGGGTTGGCAGAAGGTAACA
CAACGGTTTACCTCACGTACGCCAATACCGAGGACAACTCGCTGTATATT
GACGCCAGCCTAACCATCAGCGAGACCACTGCCGACATCGCGTTTGATCA
TGCAAAATCGGCTGTCATGTACAGCACGTCTGATGCCCTCGAGACGTTGA
CGTGGACCAAGAATGACGACGGCAAGTTTGAGGTGGCGACAGCACAACAT
CTGTTGCAGATCATGAACCAGGGCACCATGTTTACTGACTTGGGTGATTA
TCCAAACAACTATGATGATGCCAGCGACATTTATCACGTGGAAGAAGGAC
TCCATGACATATCCAAGGTCGGCTTCGAAGTGCCGGCCTCGATAGTCAAT
GTGATCTTTGCCACTGGTGATATCGTGGAAGTTGATATGGCTTTCGAAAG
AGAAACAACCATGAAAACAACATTTGTGAAGAACGGCGACTTGTTGGAAA
TTGGAGACGTGGACGCGCTTCTCCTACCATTCGATCTGCACACGTCAGAG
ACGCAAGAATCCAGCATGAAGCTCTCCGACGACACCGTCGTCACAGTGAG
TGTCGCACAAGGATCGGGTGAAATATCGGTCGGAGGAGAAACGTATGAGA
GCGGAAAGTCGTTGGTGATGGATGGTAAAAAATGTACAGTCTATGATATA
TAATTCCACTGGAGATTGTGGGGGTATGATGGGGATGATCACGTACAACG
CCACAGCCACTAATTGGCGCAATCTCGCAACATTTTCCAACGGCCTCAGT
GGCGAAAATGTTGGTGGAATCTGCGGAAATTTTGACGGTTATGGGGTGAC
GGCATCAAACTGGCTCAATGCAATGAGTGGCGACATAAACGGGCAATGGT
CCGGTGGGCTTATTGGTTACATTCGGTACGGCGGATCGTTGCAATCTCTC
GTCAACAGCATGACAGGCGATATCGCAAGCACGTCGCAGTCGGCTGCCGG
AGGCGTGGTAGGGCACATACTGTCAAGCTATACTTTTGATGGCCAAAGGT
GGTTGAACTACATGAAGGGGGACATTACGGCACCGACGGGAGGCGGTGGA
ATCATCGGATCATTCACGAGAGACAGAGACACACGCGATCTACCCCTCCT
GAAATCTATCGTTGCGATGCACGGGAGCGTGGAACAGTCCTTCCGTGGTT
CGGATGATTTCACGCCCTCCGTGGTAGAAGTTTTCGTTGACACCAGTTTC
GGCATGACTTACACCGGAAACGACTACGGGTCAGCGACGATAGTAGCGGA
CGACGCGTTCGTGTACCACGCCGACTTCACCGACCTGCCTTACATTGACA
TAGGCGGGCTGTACGACTGGGACTTCTGTTTTGCGAATGTGGGAGGGAAG
GCGGAGTCTGACAAGTACACGCACCTAAGCCTGCACAAGTCTGAAGTTTC
AACACCGTTCCGCACCGACTTCGGGTTGGCAGAAGGTAACACAACGGTTT
ACCTCACGTACGCCAATACCGAGGACAACTCGCTGTATATTGACGCCAGC
CTAACCATCAGCGAGACCACTGCCGACATCGCGTTTGATCATGCAAAATC
GGCTGTCATGTACAGCACGTCTGATGCCCTCGAGACGTTGACGTGGACCA
AGAATGACGACGGCAAGTTTGAGGTGGCGACAGCACAACATCTGTTGCAG
ATCATGAACCAGGGCACCATGTTTACTGACTTGGGTGATTATCCAAACAA
CTATGATGATGCCAGCGACATTTATCACGTGGAAGAAGGACTCCATGACA
TATCCAAGGTCGGCTTCGAAGTGCCGGCCTCGATAGTCAATGTGATCTTT
GCCACTGGTGATATCGTGGAAGTTGATATGGCTTTCGAAAGAGAAACAAC
CATGAAAACAACATTTGTGAAGAACGGCGACTTGTTGGAAATTGGAGACG
TGGACGCGCTTCTCCTACCATTCGATCTGCACACGTCAGAGACGCAAGAA
TCCAGCATGAAGCTCTCCGACGACACCGTCGTCACAGTGAGTGTCGCACA
AGGATCGGGTGAAATATCGGTCGGAGGAGAAACGTATGAGAGCGGAAAGT
CGTTGGTGATGGATGGTAAAAAATGTACAGTCTATGATATATAA
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