mRNA_Ecto-sp9_F_contig1086.749.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1086.749.1
Unique NamemRNA_Ecto-sp9_F_contig1086.749.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1086.749.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 360 bits (924), Expect = 7.630e-118
Identity = 290/313 (92.65%), Postives = 294/313 (93.93%), Query Frame = 1
Query:    1 PNLCSCKSQDEMLAVSSSQLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSRVAKSLLEKGANVSVVDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANALLASHGHSELVRELIQQLGVRGCGGVSGGVESLRLAATEQYVEIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTWYVNSTLDPFGRTPLVCTIEACGSSSPRIARCLIDARADTKSTVL 939
            PNL   KSQDEMLAVS+SQLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHS VAKSLLEKGANVSV  DGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      L   HGHSE+VRELIQQLGVRGCGGVS GVESLRLAATEQYV+IMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTWYVN+TLDPFGRTPLVCTIEACGSSSPRIAR LID  ADTKSTVL
Sbjct:    8 PNLLLYKSQDEMLAVSTSQLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------LQKQHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVL 314          
BLAST of mRNA_Ecto-sp9_F_contig1086.749.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 290 bits (743), Expect = 6.020e-91
Identity = 260/297 (87.54%), Postives = 264/297 (88.89%), Query Frame = 1
Query:  100 YHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSRVAKSLLEKGANVSVVDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANALLAS-----------------HGHSELVRELIQQLGVRGCGGVSGGVESLRLAATEQYVEIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTWYVNSTLDPFGRTPLVCTIEACGSSSPRIARCLIDARADTKSTVL 939
            YHGSADRVDALLS GSVDINQGNPKGWTPLMLA EKG SRV KSLL KGANVSVV DGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +AN LLAS                 HGHSE+VREL  QLGVRGCGGVSGGVESLRLA TEQ V+IMGILTVGGVVDTGRALVVAAE SREESVKFLLQHQAGGG WYVN+TLDPFGRTPLVCTIEACGSSSPRIAR LIDA ADTKSTVL
Sbjct:    8 YHGSADRVDALLSMGSVDINQGNPKGWTPLMLAVEKGLSRVTKSLLGKGANVSVVGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAWYVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVL 304          
BLAST of mRNA_Ecto-sp9_F_contig1086.749.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 1.710e-41
Identity = 200/424 (47.17%), Postives = 235/424 (55.42%), Query Frame = 1
Query:   55 QLWPRGPTNQLHKAAYHGSADRVDALL-STGSVDINQGNPKGWTPLMLATEKGHSRVAKSLLEKGANVSVV-DDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANALL----------------ASHGHSELVRELIQQLGVRGCGGVSGGVESLRLAATEQYVEIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQ----AGGGTW-YVNSTLDPFGRTPLVCTIE---ACGSSSPRIARCLIDARADTKSTVLQ*SQNPGNGQLPEIAWFRNSQPPPKQSRREECHGGTAAQPESDPPLAVSS*GSTRGLVAVAE*RHPHRLCRWGGLKQNETD-DSWATAETHADGPENHG*KTW 1245
            Q WPRGP N LH+AA  GS +RV ALL S  S+ I+ G   GWTPLMLA  +G SRV + LL KGANVSVV +DG                 XXXXXXXXXXXXXXXXXXXXXX             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +AN LL                A +G +E+VRELI+Q+ ++GCGG SGGV +LRLAA  Q V++M +L   GV+DTG AL+ AA  + E  VK LLQ +    AGG  + YVN T D  GRTPL+C+I+   A    SPR+ R L+DA ADT S V      P  G   +I            S  E   GG  A  +                  V + R  HRL       Q E +  S+ T + H   PE  G KTW
Sbjct:    9 QPWPRGPQNDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAV------PLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAMEKH-----------------VHKLRAIHRL-----FSQVEAERSSFDTTDDHDSDPEAKGYKTW 404          
BLAST of mRNA_Ecto-sp9_F_contig1086.749.1 vs.
Match: EsV-1-199 (n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 4.830e-38
Identity = 189/310 (60.97%), Postives = 225/310 (72.58%), Query Frame = 1
Query:   67 RGPTNQLHKAAYHGSADRVDALLST-GSVDINQGNPKGWTPLMLATEKGHSRVAKSLLEKGANVSVVDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANALLASH----------------GHSELVRELIQQLGVRGCGGVSGGVESLRLAATEQYVEIMGILT-VGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTWYVNSTLDPFGRTPLVCTIEACGSS--SPRIARCLIDARADTKSTV 936
            RGP N LHKAA+ GS +   A+LS+ G+ DI+ GNP   T LM+AT KG++ V  +LL KGANVS     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +AN LL SH                G+ ++ RE+I+Q+G+RGCGG SGGVE+LR AA E+++E M +L   GGVVDTG AL++AAE  R  +VKFLL+ +      YVN T DP+GRTP++C ++       SP+I R L+DA A+T   V
Sbjct:    9 RGPMNALHKAAWDGSVEMTGAILSSRGAPDIDLGNPSAATALMIATVKGYAGVVNALLSKGANVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAV 318          
BLAST of mRNA_Ecto-sp9_F_contig1086.749.1 vs.
Match: EsV-1-1 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 3.420e-35
Identity = 118/310 (38.06%), Postives = 150/310 (48.39%), Query Frame = 1
Query:   79 NQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSRVAKSLLEKGANVSVVDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANA-------------------LLASHGHSELVRELIQQLGVRGCGGVSGGVESLRLAATEQYVEIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQH---QAGGGTW--YVNSTLDPFGRTPLVCTIEACGSSSPRIARCLIDARADTKSTV 936
            NQLH+A   GSA+   A+L+ G+V+I+Q N  G TPLM+A   GHSR+AK L++KGANVS+ D                                                 XXXXXXXXXXXXX                             + NA                   L A HGH+++VRELIQ+LG+ GC   S G  +L  AA+ Q+++IM ILT  GVVDTG+AL +AA    E SVKFLL+H   + G G    Y+N+  D  G TPLV   + C S +PRI R L+DA ADT S V
Sbjct:  107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNAR-DVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPV 415          
BLAST of mRNA_Ecto-sp9_F_contig1086.749.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 3.910e-35
Identity = 186/316 (58.86%), Postives = 223/316 (70.57%), Query Frame = 1
Query:   43 VSSSQLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSRVAKSLLEKGANVSVVDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANALL----------------ASHGHSELVRELIQQLGVRGCGGVSGGVESLRLAATEQYVEIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGG--TWYVNSTLDPFGRTPLVCTIEACGSSSPRIARCLIDARADTKSTV 936
            +S  Q   RGP N+LHKAA  GS+ R ++LL+ G +DI+QG+P+GWTPLM A E+GHS V K LL +GA++  VDD   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    LL                A +GH  + REL+Q+ G+RGC G S GV++L  AA +Q++++M +L   GVVDTG ALV      RE ++KFLL+ +  G   T Y ++  D  G TPL+  +   G  SPR+ R L+DA AD    V
Sbjct:    1 MSHLQRLARGPRNELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSAVTT-GPCSPRVVRLLVDAGADATLAV 315          
BLAST of mRNA_Ecto-sp9_F_contig1086.749.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 2.060e-34
Identity = 144/296 (48.65%), Postives = 183/296 (61.82%), Query Frame = 1
Query:   37 LAVSSSQLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSRVAKSLLEKGANVSVVDD-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANALL----------------ASHGHSELVRELIQQLGVRGCGGVSGGVESLRLAATEQYVEIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGT---WYVNSTLDPFGRTPLVCTIE 864
            + + + + WPRGP N+LH AA  GS  R  A+LS+G ++INQG+P GWTPLM+A+++G++R+ + L+++GANV +V D G   XXXXXXXXXXXXXXXXX                          XXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXX +A+ LL                A  G S +VRE + QLG+ GCGG S G  +L  AA EQ+V+ M +L   GVVDTG AL+ A + +RE S+KFLL+ Q   G     YV+   DPFGRTPL+C+IE
Sbjct:    1 MIMPAQEKWPRGPKNELHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGADLEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVSRDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENREGSIKFLLRQQQLQGNPTGAYVDEARDPFGRTPLLCSIE 296          
BLAST of mRNA_Ecto-sp9_F_contig1086.749.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 131 bits (330), Expect = 2.780e-30
Identity = 174/314 (55.41%), Postives = 206/314 (65.61%), Query Frame = 1
Query:   55 QLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSRVAKSLLEKGANVSVVDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANALL---------------ASHGHSELVRELIQQLGVRGCGGVSGGVESLRLAATEQYVEIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTW---YVNSTLDPFGRTPLVCTIEAC--GSSSPRIARCLIDARADTKSTV 936
            Q  PR   N+LH+AA  GS     A+LSTGS+DI+ G+  G TPLM A    H  V   LL KGA+VS ++D                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +AN LL               A +G   +V EL+Q+ G+RGCGG +GGV +L+LAA + ++++M  LT  GVVDTG ALV A  +   + VKFLLQ Q G  +    YV+   DP GRTPL+C I+     S SP++ R L+DA ADT S V
Sbjct:    8 QQSPRVVINKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIV 321          
BLAST of mRNA_Ecto-sp9_F_contig1086.749.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 3.070e-30
Identity = 130/265 (49.06%), Postives = 153/265 (57.74%), Query Frame = 1
Query:   55 QLWPRGPTNQLHKAAYHGSADRVDALL-STGSVDINQGNPKGWTPLMLATEKGHSRVAKSLLEKGANVSVV-DDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANALL----------------ASHGHSELVRELIQQLGVRGCGGVSGGVESLRLAATEQYVEIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAG 795
            Q WPRGP N LH+AA  GS +RV ALL S  S+DINQG   GWTPLMLA  +G SRV + L  KGANVSVV DD                                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +AN LL                A +G +E+V+EL+QQ+ ++GCGG SGGV++LRLAA  Q V++M +L   GV+DTG AL+ AA  + E  VK LLQ + G
Sbjct:    9 QPWPRGPQNDLHRAANDGSIERVVALLASRPSIDINQGAEYGWTPLMLAAWRGSSRVVRILPNKGANVSVVADDFHTALHFSTQDGGHPVVTKMLLKAGADFEAVTSEGETPLHLVADSGCWEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTSSGVTFVPLDTAAEYGQTEVVQELVQQVSIKGCGGASGGVDALRLAALSQNVDVMAVLADVGVMDTGEALITAAGRNDEAGVKLLLQQRHG 273          
BLAST of mRNA_Ecto-sp9_F_contig1086.749.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 2.700e-29
Identity = 154/308 (50.00%), Postives = 183/308 (59.42%), Query Frame = 1
Query:   79 NQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSRVAKSLLEKGANVSVVDD-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQANALL--------------ASHGHSELVRELIQQLGVRGCGGVSGGVESLRLAATEQYVEIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQA---GGGTWYVNSTLDPFGRTPLVCTIEACG----SSSPRIARCLIDARADTKSTV 936
            N LH AA+ GS +R   LL+TGS DINQG    WTPL+ A   GHS V   LL KGANVS+V D G      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                 AN L+              A +G+  ++RELIQ++G+ GCGG S G  +L +A   + V  M +LT  GVVDTG+AL ++A   RE SVK+LLQ+ A   G G  YVN   D  G TPL+ +I  CG    SS PR+AR L++A ADT + +
Sbjct:    2 NSLHDAAFKGSTERTAELLATGSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLITRAPLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGA-YVN-VRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTEL 307          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1086.749.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
EsV-1-1997.630e-11892.65n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Uncharacterized6.020e-9187.54protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.710e-4147.17protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
EsV-1-1994.830e-3860.97n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI[more]
EsV-1-13.420e-3538.06n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
EsV-1-1993.910e-3558.86n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
EsV-1-1992.060e-3448.65n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
EsV-1-1992.780e-3055.41n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
EsV-1-1993.070e-3049.06n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
EsV-1-1992.700e-2950.00n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1086contigEcto-sp9_F_contig1086:10850..12440 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score347.4
Seed ortholog evalue6.6e-93
Seed eggNOG ortholog2880.D7G1U9
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEsV-1-199-related ankyrin repeat protein
Ec32 orthologEc-07_004040.1
Exons3
Model size1315
Cds size912
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1086.749.1prot_Ecto-sp9_F_contig1086.749.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1086 11445..12407 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928307.9069972-UTR-Ecto-sp9_F_contig1086:10849..108951622928307.9069972-UTR-Ecto-sp9_F_contig1086:10849..10895Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1086 10850..10895 -
1692277829.5117826-UTR-Ecto-sp9_F_contig1086:10849..108951692277829.5117826-UTR-Ecto-sp9_F_contig1086:10849..10895Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1086 10850..10895 -
1622928307.9215672-UTR-Ecto-sp9_F_contig1086:11120..114441622928307.9215672-UTR-Ecto-sp9_F_contig1086:11120..11444Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1086 11121..11444 -
1692277829.521632-UTR-Ecto-sp9_F_contig1086:11120..114441692277829.521632-UTR-Ecto-sp9_F_contig1086:11120..11444Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1086 11121..11444 -
1622928307.9721375-UTR-Ecto-sp9_F_contig1086:12407..124401622928307.9721375-UTR-Ecto-sp9_F_contig1086:12407..12440Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1086 12408..12440 -
1692277829.543522-UTR-Ecto-sp9_F_contig1086:12407..124401692277829.543522-UTR-Ecto-sp9_F_contig1086:12407..12440Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1086 12408..12440 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928307.9403486-CDS-Ecto-sp9_F_contig1086:11444..118251622928307.9403486-CDS-Ecto-sp9_F_contig1086:11444..11825Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1086 11445..11825 -
1692277829.529073-CDS-Ecto-sp9_F_contig1086:11444..118251692277829.529073-CDS-Ecto-sp9_F_contig1086:11444..11825Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1086 11445..11825 -
1622928307.9567783-CDS-Ecto-sp9_F_contig1086:11876..124071622928307.9567783-CDS-Ecto-sp9_F_contig1086:11876..12407Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1086 11877..12407 -
1692277829.5361545-CDS-Ecto-sp9_F_contig1086:11876..124071692277829.5361545-CDS-Ecto-sp9_F_contig1086:11876..12407Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1086 11877..12407 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1086.749.1

>prot_Ecto-sp9_F_contig1086.749.1 ID=prot_Ecto-sp9_F_contig1086.749.1|Name=mRNA_Ecto-sp9_F_contig1086.749.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=304bp
MLAVSSSQLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWT
PLMLATEKGHSRVAKSLLEKGANVSVVDDGGFTALLTSAQSGQQAIAKML
VKARANLESADIDGSTPLHVAAQGGYSGVMRVLLEAGANPNSRRSDGATP
LFSAALGGYVDAVRELLQKQANALLASHGHSELVRELIQQLGVRGCGGVS
GGVESLRLAATEQYVEIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQ
HQAGGGTWYVNSTLDPFGRTPLVCTIEACGSSSPRIARCLIDARADTKST
VLQ*
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mRNA from alignment at Ecto-sp9_F_contig1086:10850..12440-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1086.749.1 ID=mRNA_Ecto-sp9_F_contig1086.749.1|Name=mRNA_Ecto-sp9_F_contig1086.749.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1591bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1086:10850..12440- (Ectocarpus species9 EcSCA_722f female)
CCAAACCTCTGCTCTTGCAAATCACAAGACGAAATGCTCGCGGTGTCTAG TTCGCAGCTTTGGCCCCGGGGGCCTACGAACCAGCTCCACAAGGCTGCTT ACCACGGGTCTGCCGATCGCGTCGACGCTCTCCTGTCTACGGGATCTGTC GATATCAACCAAGGCAACCCGAAGGGATGGACTCCTCTCATGTTGGCCAC AGAGAAAGGCCATTCCCGCGTTGCAAAGAGCCTCCTAGAGAAGGGAGCCA ACGTGTCAGTCGTGGACGATGGCGGCTTCACTGCTCTTCTGACTTCCGCT CAAAGTGGACAGCAGGCCATCGCGAAGATGCTCGTGAAGGCGCGTGCCAA CCTGGAGAGCGCGGACATCGACGGCTCCACGCCGCTTCACGTTGCTGCGC AGGGGGGGTACTCTGGGGTGATGAGAGTGCTGCTCGAGGCAGGCGCTAAT CCCAACAGCCGCAGGTCCGACGGAGCGACGCCGCTTTTCTCCGCGGCGCT CGGTGGGTACGTGGACGCGGTCAGGGAGCTGCTCCAAAAGCAAGCCAACG CCCTGTTGGCTTCAGTGCCGGCTCCATCGGGGGCAACCTTTGTCCCGTTG GATGTGGCGGTGCAGCACGGACACTCGGAGTTGGTGCGCGAGTTGATCCA GCAGCTCGGGGTCCGGGGATGTGGCGGCGTGAGCGGCGGTGTGGAATCTC TCCGCCTGGCTGCCACGGAGCAGTACGTCGAAATCATGGGCATACTAACG GTCGGTGGGGTGGTAGACACAGGCCGAGCCCTCGTTGTTGCCGCCGAGTA CAGCCGAGAGGAGTCGGTGAAGTTCTTGCTACAGCACCAAGCGGGCGGAG GTACTTGGTATGTGAACAGCACTCTCGACCCGTTCGGCAGGACGCCTCTG GTATGTACTATTGAGGCTTGCGGGTCATCCTCTCCCAGGATTGCGCGGTG TCTTATTGACGCCAGAGCGGACACGAAATCGACCGTGCTACAGTAGTCAC AAAATCCGGGGAATGGACAACTTCCCGAGATCGCTTGGTTTCGCAACTCG CAGCCTCCGCCAAAACAAAGTAGGAGGGAAGAATGCCACGGAGGAACAGC TGCGCAGCCTGAAAGCGATCCACCGCTTGCTGTCTCAAGTTGAGGCAGTA CACGCGGTCTCGTGGCTGTGGCGGAGTAGCGACACCCGCATCGGCTATGC CGTTGGGGCGGCCTCAAGCAGAATGAAACCGACGACAGCTGGGCCACCGC TGAAACACATGCCGACGGTCCTGAGAACCACGGTTGAAAAACGTGGATTG GTCGTGCGGGCCGTGTGCAGGTGAGTCTACATGCTATCATACAATGGGGC ACAATTATATTGGCGGGTATTGCAACGGCTGAAGCTACTCGGTCGAGTAC ATCGAGAAATTCCCACAGTAAGATTTTTTCTGCCAAAAAAGTACGACGAC GATACTGGGGTTCCTCATGTGGAGAACCCCGAACAACGAGAAGCTGGATC ACAATCGTGACATGGATGACTCAACGACAAACATCACCATCACAGGGCCG CGGAAAAAATCGTTCGCGGTGCTCGTTGGCATGCGGGACGT
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1086:10850..12440-

>mRNA_Ecto-sp9_F_contig1086.749.1 ID=mRNA_Ecto-sp9_F_contig1086.749.1|Name=mRNA_Ecto-sp9_F_contig1086.749.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1824bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1086:10850..12440- (Ectocarpus species9 EcSCA_722f female)
ATGCTCGCGGTGTCTAGTTCGCAGCTTTGGCCCCGGGGGCCTACGAACCA
GCTCCACAAGGCTGCTTACCACGGGTCTGCCGATCGCGTCGACGCTCTCC
TGTCTACGGGATCTGTCGATATCAACCAAGGCAACCCGAAGGGATGGACT
CCTCTCATGTTGGCCACAGAGAAAGGCCATTCCCGCGTTGCAAAGAGCCT
CCTAGAGAAGGGAGCCAACGTGTCAGTCGTGGACGATGGCGGCTTCACTG
CTCTTCTGACTTCCGCTCAAAGTGGACAGCAGGCCATCGCGAAGATGCTC
GTGAAGGCGCGTGCCAACCTGGAGAGCGCGGACATCGACGGCTCCACGCC
GCTTCACGTTGCTGCGCAGGGGGGGTACTCTGGGGTGATGAGAGTGCTGC
TCGAGGCAGGCGCTAATCCCAACAGCCGCAGGTCCGACGGAGCGACGCCG
CTTTTCTCCGCGGCGCTCGGTGGGTACGTGGACGCGGTCAGGGAGCTGCT
CCAAAAGCAAGCCAACGCCCTGTTGGCTTCAATGCTCGCGGTGTCTAGTT
CGCAGCTTTGGCCCCGGGGGCCTACGAACCAGCTCCACAAGGCTGCTTAC
CACGGGTCTGCCGATCGCGTCGACGCTCTCCTGTCTACGGGATCTGTCGA
TATCAACCAAGGCAACCCGAAGGGATGGACTCCTCTCATGTTGGCCACAG
AGAAAGGCCATTCCCGCGTTGCAAAGAGCCTCCTAGAGAAGGGAGCCAAC
GTGTCAGTCGTGGACGATGGCGGCTTCACTGCTCTTCTGACTTCCGCTCA
AAGTGGACAGCAGGCCATCGCGAAGATGCTCGTGAAGGCGCGTGCCAACC
TGGAGAGCGCGGACATCGACGGCTCCACGCCGCTTCACGTTGCTGCGCAG
GGGGGGTACTCTGGGGTGATGAGAGTGCTGCTCGAGGCAGGCGCTAATCC
CAACAGCCGCAGGTCCGACGGAGCGACGCCGCTTTTCTCCGCGGCGCTCG
GTGGGTACGTGGACGCGGTCAGGGAGCTGCTCCAAAAGCAAGCCAACGCC
CTGTTGGCTTCACACGGACACTCGGAGTTGGTGCGCGAGTTGATCCAGCA
GCTCGGGGTCCGGGGATGTGGCGGCGTGAGCGGCGGTGTGGAATCTCTCC
GCCTGGCTGCCACGGAGCAGTACGTCGAAATCATGGGCATACTAACGGTC
GGTGGGGTGGTAGACACAGGCCGAGCCCTCGTTGTTGCCGCCGAGTACAG
CCGAGAGGAGTCGGTGAAGTTCTTGCTACAGCACCAAGCGGGCGGAGGTA
CTTGGTATGTGAACAGCACTCTCGACCCGTTCGGCAGGACGCCTCTGGTA
TGTACTATTGAGGCTTGCGGGTCATCCTCTCCCAGGATTGCGCGGTGTCT
TATTGACGCCAGAGCGGACACGAAATCGACCGTGCTACAGTAGCACGGAC
ACTCGGAGTTGGTGCGCGAGTTGATCCAGCAGCTCGGGGTCCGGGGATGT
GGCGGCGTGAGCGGCGGTGTGGAATCTCTCCGCCTGGCTGCCACGGAGCA
GTACGTCGAAATCATGGGCATACTAACGGTCGGTGGGGTGGTAGACACAG
GCCGAGCCCTCGTTGTTGCCGCCGAGTACAGCCGAGAGGAGTCGGTGAAG
TTCTTGCTACAGCACCAAGCGGGCGGAGGTACTTGGTATGTGAACAGCAC
TCTCGACCCGTTCGGCAGGACGCCTCTGGTATGTACTATTGAGGCTTGCG
GGTCATCCTCTCCCAGGATTGCGCGGTGTCTTATTGACGCCAGAGCGGAC
ACGAAATCGACCGTGCTACAGTAG
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