mRNA_Ecto-sp9_F_contig1085.738.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1085.738.1
Unique NamemRNA_Ecto-sp9_F_contig1085.738.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1085.738.1 vs.
Match: TFIIS-type (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE56_ECTSI)

HSP 1 Score: 403 bits (1035), Expect = 2.660e-136
Identity = 204/237 (86.08%), Postives = 206/237 (86.92%), Query Frame = 3 
Query:    3 SDSFWLLPAPSVGSFWLLLAPFLFPKNADSMLPPTPPCWASLSINTPKVLLFASPPSSQS---PRRCACVLCVFPTAHTTRHVPHSPPPRPAGTSRVALLQRASHLYAGLSLWRHRGIKMADTMRFCSECNNIMHPKENKTDRKLMYSCNRCTYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS 704
            SDSFWLLPA   G  WLL   F   K      P   P   SLSIN P+VLLFASPPSSQS   PRRCACVLCVFPT HTTR VPHSPPPRPAGTSR+ALLQRASHLYA LSLWRHRGIKMADTMRFCSECNNIMHPKENKTDRKLMYSCNRC YEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS
Sbjct:    5 SDSFWLLPAAPSGC-WLL---FRSRKTLTPCYPSPLPIDTSLSINRPRVLLFASPPSSQSSQSPRRCACVLCVFPTTHTTRQVPHSPPPRPAGTSRIALLQRASHLYAVLSLWRHRGIKMADTMRFCSECNNIMHPKENKTDRKLMYSCNRCKYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS 237
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BLAST of mRNA_Ecto-sp9_F_contig1085.738.1 vs.
Match: DNA-directed (RNA polymerase subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYP5_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.600e-46
Identity = 79/113 (69.91%), Postives = 91/113 (80.53%), Query Frame = 3 
Query:  363 MRFCSECNNIMHPKENKTDRKLMYSCNRCTYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWV 701
            MRFC ECNNI+HPKEN+T R L Y+CNRC Y E+A   SCVY NNL+ T   KLDIV  DVV+DPTLQRSK+ IC++CNY+EAVFFQAD+ AKS SLSLIFVCT+  CG KWV
Sbjct:    1 MRFCKECNNILHPKENRTTRTLFYACNRCAYREEAGQ-SCVYENNLVKTTELKLDIVHEDVVNDPTLQRSKHQICDRCNYSEAVFFQADDSAKSSSLSLIFVCTH--CGKKWV 110
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BLAST of mRNA_Ecto-sp9_F_contig1085.738.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJ32_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.720e-30
Identity = 57/112 (50.89%), Postives = 74/112 (66.07%), Query Frame = 3 
Query:  366 RFCSECNNIMHPKENKTDRKLMYSCNRCTYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWV 701
            RFC +C N+  P+E +T R LM +C  C YEE A S   VY N +      +LDI+  ++ DDPTLQRS + +CE CNY+EAV FQA+ G  ++SLSLIFVC N  C HKW+
Sbjct:   34 RFCPQCGNMWQPREERTTRTLMLNCRNCGYEEPATSYK-VYENRIKKEVSTRLDIINPEITDDPTLQRSNDVVCENCNYSEAVLFQAESGITAKSLSLIFVCCN--CKHKWI 142
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BLAST of mRNA_Ecto-sp9_F_contig1085.738.1 vs.
Match: DNA-directed (RNA polymerase subunit n=2 Tax=Umbelopsis TaxID=64561 RepID=A0A8H7UCI9_9FUNG)

HSP 1 Score: 119 bits (297), Expect = 2.040e-28
Identity = 53/114 (46.49%), Postives = 82/114 (71.93%), Query Frame = 3 
Query:  360 TMRFCSECNNIMHPKENKTDRKLMYSCNRCTYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWV 701
            + ++CSECNN+++P+E+KT+RKL+++C  C +EEDA + +CVYR+ ++  A ++  +V TD+  DPTL R+  A C +C Y EAVFFQ+        ++L +VC NRACGH+WV
Sbjct:    3 SFKYCSECNNMLYPREDKTNRKLLFACRNCHFEEDADN-NCVYRHEIVH-APSEQTMVLTDLSADPTLPRTTTA-CPRCGYQEAVFFQSAARRADTKMTLFYVCCNRACGHRWV 113
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BLAST of mRNA_Ecto-sp9_F_contig1085.738.1 vs.
Match: TFIIS-type (domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0THW0_THAOC)

HSP 1 Score: 118 bits (295), Expect = 2.340e-27
Identity = 59/115 (51.30%), Postives = 81/115 (70.43%), Query Frame = 3 
Query:  363 MRFCSECNNIMHPKENKTDRKLMYSCNRCTYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEG-AKSQSLSLIFVCTNRACGHKWVS 704
            MRFC   +++++PKEN ++RKL+Y+C  C Y E A +G  +Y+N L    GN L  V  DV DDPTL RS+NA C KC ++EAV+FQ+D    +S+SL+LIFVC N  CG+KWV+
Sbjct:   65 MRFCPHDSSMLYPKENPSERKLVYACRLCRYTEYA-AGQLIYKNVLKKEVGNILHTVPADVSDDPTLPRSQNAHCGKCGHSEAVYFQSDTSDVRSESLALIFVCCN--CGYKWVA 176
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BLAST of mRNA_Ecto-sp9_F_contig1085.738.1 vs.
Match: TFIIS-type (domain-containing protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UFX2_COLES)

HSP 1 Score: 120 bits (300), Expect = 2.530e-27
Identity = 73/182 (40.11%), Postives = 100/182 (54.95%), Query Frame = 3 
Query:  159 ASPPSSQSPRRCACVLCVFPTAHTTRHVPHSPPPRPAGTSRVALL--QRASHLYAGLSLWRHRGIKMADTMRFCSECNNIMHPKENKTDRKLMYSCNRCTYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 698
            ASPP S S          FPT           P  PA T+  A    + AS L   LS           TM+FC ECNNI++PKE++  + L+Y+C  C ++E A + +CVYRN +  + G +  ++Q DV  DPTL R+KN  C KCN+ EAVFFQA    + + ++L FVC N +CGH+W
Sbjct:   76 ASPPVSAS--------LSFPTLLPPSSTQEFFPGAPAATAATATFGHREASSLSCMLS--------NMSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVADN-NCVYRNEIHHSVGERTQVLQ-DVAADPTLPRTKNVRCAKCNHPEAVFFQAAARGE-EGMTLFFVCCNPSCGHRW 238
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BLAST of mRNA_Ecto-sp9_F_contig1085.738.1 vs.
Match: DNA-directed (RNA polymerase subunit n=3 Tax=Arecaceae TaxID=4710 RepID=A0A8B7CCB1_PHODC)

HSP 1 Score: 115 bits (289), Expect = 2.690e-27
Identity = 55/112 (49.11%), Postives = 77/112 (68.75%), Query Frame = 3 
Query:  363 MRFCSECNNIMHPKENKTDRKLMYSCNRCTYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 698
            M+FC ECNNI++PKE+K  + L+++C  C YEE A S  CVYRN +    G +  I+Q DV +DPTL R+K+  C KC++ EAVFFQA    + + ++L FVC N ACG++W
Sbjct:    4 MKFCRECNNILYPKEDKQKKILLFACRNCDYEEVADS-FCVYRNEVHHAVGERTQILQ-DVANDPTLPRTKDVRCVKCDHPEAVFFQASSRGE-EGMTLFFVCCNPACGYRW 112
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BLAST of mRNA_Ecto-sp9_F_contig1085.738.1 vs.
Match: Dna-directed (rna polymerase ii kDa polypeptide n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T555_9STRA)

HSP 1 Score: 116 bits (291), Expect = 7.340e-27
Identity = 61/120 (50.83%), Postives = 77/120 (64.17%), Query Frame = 3 
Query:  360 TMRFCSECNNIMHPKENKTDRKLMYSCN--RCTYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS*SP 713
            TM+FC  CN I++PKE+K +RKL+Y C   RC +EEDA     V+RN +I T    LD V + V +DPTLQRS  A C  C+Y+EAV  Q+ +  KS  L+LIFVC N  CGHKW    P
Sbjct:   54 TMKFCPNCNFILYPKEDKDERKLVYYCRSPRCDHEEDAPD-PYVFRNQVIKTRTVNLDHVLSAVANDPTLQRS-TADCPLCHYHEAVLIQSTQNVKSNKLTLIFVCCNPNCGHKWTDDDP 171
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BLAST of mRNA_Ecto-sp9_F_contig1085.738.1 vs.
Match: DNA-directed (RNA polymerase subunit n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7VS23_9FUNG)

HSP 1 Score: 114 bits (285), Expect = 9.730e-27
Identity = 52/113 (46.02%), Postives = 77/113 (68.14%), Query Frame = 3 
Query:  360 TMRFCSECNNIMHPKENKTDRKLMYSCNRCTYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKW 698
            T ++C +CNN+++P+E+KT+R+L+++C  C YEEDA +  CVYR+ +I  A  +  IV +D+  DPTL R+ N ICEKC   EAVFFQ+        ++L +VC NR C H+W
Sbjct:    3 TFKYCLDCNNLLYPREDKTNRRLLFACRNCQYEEDADN-LCVYRHEIIHAASEQTMIV-SDLSADPTLPRA-NVICEKCGSQEAVFFQSTSRRADAKMTLFYVCGNRNCSHRW 112
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BLAST of mRNA_Ecto-sp9_F_contig1085.738.1 vs.
Match: DNA-directed (RNA polymerase subunit n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8MT71_9MYRT)

HSP 1 Score: 114 bits (284), Expect = 2.340e-26
Identity = 52/114 (45.61%), Postives = 76/114 (66.67%), Query Frame = 3 
Query:  363 MRFCSECNNIMHPKENKTDRKLMYSCNRCTYEEDAQSGSCVYRNNLITTAGNKLDIVQTDVVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGHKWVS 704
            +RFC ECNN+++PKE+K  RKL+YSC  C ++ +A + +CVY N  IT   ++L  + +DV+ DPTL R+K+  C KC++ EAVFFQ         + L +VCTN  C HKW++
Sbjct:   19 IRFCHECNNMLYPKEDKEQRKLLYSCRNCDWKTNADN-NCVYVNK-ITHEVDELARIVSDVIHDPTLPRTKDHPCPKCHHKEAVFFQGQSRRAEDDMRLYYVCTNSRCTHKWIA 130
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1085.738.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
TFIIS-type2.660e-13686.08domain-containing protein n=1 Tax=Ectocarpus silic... [more]
DNA-directed1.600e-4669.91RNA polymerase subunit n=1 Tax=Tribonema minus Tax... [more]
Hypothetical2.720e-3050.89protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
DNA-directed2.040e-2846.49RNA polymerase subunit n=2 Tax=Umbelopsis TaxID=64... [more]
TFIIS-type2.340e-2751.30domain-containing protein n=1 Tax=Thalassiosira oc... [more]
TFIIS-type2.530e-2740.11domain-containing protein n=1 Tax=Colocasia escule... [more]
DNA-directed2.690e-2749.11RNA polymerase subunit n=3 Tax=Arecaceae TaxID=471... [more]
Dna-directed7.340e-2750.83rna polymerase ii kDa polypeptide n=1 Tax=Nannochl... [more]
DNA-directed9.730e-2746.02RNA polymerase subunit n=1 Tax=Mucor circinatus Ta... [more]
DNA-directed2.340e-2645.61RNA polymerase subunit n=1 Tax=Rhodamnia argentea ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1085contigEcto-sp9_F_contig1085:14343..23390 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score387.1
Seed ortholog evalue5.1e-105
Seed eggNOG ortholog2880.D8LE56
Preferred namePOLR2I
KEGG rclassRC02795
KEGG koko:K03017
KEGG ReactionR00435,R00441,R00442,R00443
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko05016,ko05169,map00230,map00240,map01100,map03020,map05016,map05169
KEGG ModuleM00180
GOsGO:0000375,GO:0000377,GO:0000398,GO:0000428,GO:0001192,GO:0001193,GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006354,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0008270,GO:0008380,GO:0008543,GO:0009058,GO:0009059,GO:0009301,GO:0009452,GO:0009719,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0023052,GO:0030880,GO:0031974,GO:0031981,GO:0032774,GO:0032991,GO:0033554,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036260,GO:0042221,GO:0042795,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055029,GO:0060147,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061695,GO:0065007,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0090304,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234
EggNOG free text desc.Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen
EggNOG OGsCOG1594@1,KOG2691@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko03021,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionZinc finger, TFIIS-type
Ec32 orthologEc-00_001020.1
Exons5
Model size1587
Cds size615
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928306.9471276-UTR-Ecto-sp9_F_contig1085:14342..152221622928306.9471276-UTR-Ecto-sp9_F_contig1085:14342..15222Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1085 14343..15222 -
1692277829.065744-UTR-Ecto-sp9_F_contig1085:14342..152221692277829.065744-UTR-Ecto-sp9_F_contig1085:14342..15222Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1085 14343..15222 -
1622928307.0383704-UTR-Ecto-sp9_F_contig1085:23298..233901622928307.0383704-UTR-Ecto-sp9_F_contig1085:23298..23390Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1085 23299..23390 -
1692277829.1237373-UTR-Ecto-sp9_F_contig1085:23298..233901692277829.1237373-UTR-Ecto-sp9_F_contig1085:23298..23390Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1085 23299..23390 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928306.9658306-CDS-Ecto-sp9_F_contig1085:15222..152971622928306.9658306-CDS-Ecto-sp9_F_contig1085:15222..15297Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1085 15223..15297 -
1692277829.077468-CDS-Ecto-sp9_F_contig1085:15222..152971692277829.077468-CDS-Ecto-sp9_F_contig1085:15222..15297Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1085 15223..15297 -
1622928306.978697-CDS-Ecto-sp9_F_contig1085:19781..198991622928306.978697-CDS-Ecto-sp9_F_contig1085:19781..19899Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1085 19782..19899 -
1692277829.0856879-CDS-Ecto-sp9_F_contig1085:19781..198991692277829.0856879-CDS-Ecto-sp9_F_contig1085:19781..19899Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1085 19782..19899 -
1622928306.9946108-CDS-Ecto-sp9_F_contig1085:20588..207201622928306.9946108-CDS-Ecto-sp9_F_contig1085:20588..20720Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1085 20589..20720 -
1692277829.094088-CDS-Ecto-sp9_F_contig1085:20588..207201692277829.094088-CDS-Ecto-sp9_F_contig1085:20588..20720Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1085 20589..20720 -
1622928307.0072293-CDS-Ecto-sp9_F_contig1085:21147..211781622928307.0072293-CDS-Ecto-sp9_F_contig1085:21147..21178Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1085 21148..21178 -
1692277829.1028247-CDS-Ecto-sp9_F_contig1085:21147..211781692277829.1028247-CDS-Ecto-sp9_F_contig1085:21147..21178Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1085 21148..21178 -
1622928307.0241427-CDS-Ecto-sp9_F_contig1085:23039..232981622928307.0241427-CDS-Ecto-sp9_F_contig1085:23039..23298Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1085 23040..23298 -
1692277829.1117318-CDS-Ecto-sp9_F_contig1085:23039..232981692277829.1117318-CDS-Ecto-sp9_F_contig1085:23039..23298Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1085 23040..23298 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1085.738.1prot_Ecto-sp9_F_contig1085.738.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1085 15223..23298 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1085.738.1

>prot_Ecto-sp9_F_contig1085.738.1 ID=prot_Ecto-sp9_F_contig1085.738.1|Name=mRNA_Ecto-sp9_F_contig1085.738.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=205bp
MLPPTPPCWASLSINTPKVLLFASPPSSQSPRRCACVLCVFPTAHTTRHV
PHSPPPRPAGTSRVALLQRASHLYAGLSLWRHRGIKMADTMRFCSECNNI
MHPKENKTDRKLMYSCNRCTYEEDAQSGSCVYRNNLITTAGNKLDIVQTD
VVDDPTLQRSKNAICEKCNYNEAVFFQADEGAKSQSLSLIFVCTNRACGH
KWVS*
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mRNA from alignment at Ecto-sp9_F_contig1085:14343..23390-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1085.738.1 ID=mRNA_Ecto-sp9_F_contig1085.738.1|Name=mRNA_Ecto-sp9_F_contig1085.738.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=9048bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1085:14343..23390- (Ectocarpus species9 EcSCA_722f female)
CTTCTGACTCCTTCTGGCTCCTTCCGGCTCCTTCCGTCGGCTCCTTCTGG
CTCCTTCTTGCTCCTTTTTTGTTCCCGAAAAACGCTGACTCCATGCTACC
CCCCACCCCTCCCTGCTGGGCCTCTTTATCTATAAACACGCCAAAGGTAT
TATTGTTTGCGTCGCCCCCATCGTCGCAATCGCCGCGCCGTTGCGCGTGT
GTGCTGTGTGTGTTTCCAACCGCACACACCACCAGACACGTACCGCACAG
CCCTCCGCCGCGGCCAGCAGGAACCTCTCGCGTAGCTTTGCTCCAGCGGG
CATCCCACTTGTACGCAGGGCTCTCGTTGTGGCGACATCGTGGGATCAAA
AGTGAGTGTGGTTAATTGTTTCTCATGGGTGCCCTCAAAAGACACGCTAC
ACAGGCCACGGCCACCCGAGGCGCTCGGCTGTTGCGAGTCCGATCTGGTT
TGCTTGGGTAGAGATGTTCTCATAGACTTTTGCGATTTCTTCCACAGTAA
TAATGTGTGCTGCTGCATGCGTTGTATGGTCGTGCTGCGGCCCCGAATTC
CCGATGTCCTTGAAGGCAGCTGTCAGCACTGCTGTACCTTCGCTGCAGCC
AAAGAGGTGTCCCTTACACAGCAGCACACCTTCTCCATGGCATAGGCATG
GGCACGACTGCTTGTACGCTGGATTCACACTTCTCATCAACAGGTATAAG
ACAGGTTGAGACACCTTACAATAATCAACAGAGGGTGTGATTTGAAATTT
GAAATGAACGATCCCCATAGGGATGCCCAATCAAACCCATAGGACAGCTG
TATGAGGATTAGACTCACCGTAGTTGGTTACGCCGCACTCGTGTCTGGTG
TCTGGTGTCTGGTGTCTATTGCGGGATGCGACGGCAGGGTCAGTCTACAG
AGTATGTACCAGACGATGTGGTGACACAGCATATCCCCTGTTCCCACAGC
GCACTCAAAGGGTGTGTGTGCGTTCATCTCATTTATTCTGGTGCTAGCCT
ACACACATGATACGTATGTTCGACGTATCAGCGTATCAACCGGAGTCACA
CAGGACGTAATGCCTTTTTGGTTCAGCGCGGTGCCCAGATATTGACTTTC
AATCCAACTCCGTTGACGCAAAACACCCCTTTTTATGGGAGCACAGAGTT
GCGCGAAAAGTTGCGAAGTTTCTTTTTTTTTTTCTTATTAGACACATTGG
AACCATCTCTATCTATAAAAAAGAGTCAAAGATAGATTGACAATGACTCC
AGAGCATCAGCGAAGGCTACCTGTCTTTCCACGATTTCCCTAGCAGCACA
CAGCGATATCTCCCCCGCGGGAAACAGGGCCAACAAGACAGTTTGGTAGC
CATCTGGTGCATCTATCTGTATGTAATGATGGGAAGGTGTAACTTTTGGT
CGGGAACTTTTGTATTAAACATTTTTTATTACACGCTCATTATCGGGCGA
AGGAAGTTTTCACGTGGAGATCTTCTTCACGGGACTGGTGGAAGGCGGAG
GCGTGCTCATTATTGTATATTGAGCAACGGCGAGAAGCAGGCACACCCGT
TCATACCACACCGCGAAACCGGCCAGAGCATGCAACAACAGCTCAGAAAA
CGAGTTGGTGGCATAAAACCTGGCGTGCATTCCCTTCGAAGCCAGGAAGA
CCTCAACGATGCTCACATTCAACACAAATTGTTGACGCAGACTCTACCAG
CAAGTATTCTACACAGGTGCGACCATCGCAGGCAATTCCTACTCGTCGTT
CAAGTATTCTGACTTGCCGTTCATCTATAGCGTAGATCGTGCGTGTGTGT
GGCGGGAGAAAGTCTACGTGTGTGATAGGGGCAGGCGCTTGACGTGGATT
GGTGGAAATCTCGCCTCGAAACTTTTGTTCGACACATTTGTCGCGAAAAT
GTGTTGCAAACATTTGCTACACCGCGCGATTATTGTCAAAAGCGAAAGTT
TCCAAACGTTTGGCGTGACTGTTTGCTCCCATGAAGGAGCGTACTAGAGA
AACGTTGCGAGAAAACTTTGCAAACCTGAACTTTTCTCGCAACTTTATGC
TCCCATAAAAAGCGGTGTATATCTGCGGGTATTTATGAAAATGTAGTTGC
CATCATTCGCTCGACTTGACGGAATAGTTCTCTCTCGGTCCGCCTCCTTG
CCTCGTTGATCTGCTGCGGACGTTGCCTTGCGGGCCATCTTTCCTCTTCA
TCAAATGATCAGTGGCGGATACTATGCGATTCTGCAGCGAATGGTGGGTC
ATGTATGGATGGGTATAGGCACCGTGAGATATTGCCTTAGTCGCGCGTGG
TACCGTACACTACCGCATGTGCCCACTCGCACGGTTATTGTGTGATTTAG
ACCTACGAGCATGGTAGTGCACTGCAGCGTGATGCCTGCCGCATGTGCCC
ACTCGTACTGTTGTTCTGTGGTGTAGACCTATAAGCATGGCGGTGCGCTG
CAGCGTCATGCCACATCTTGGGCCATATGTACCATCGGCGCTGTCGACAC
GATGTCCGTCGGCACTGGTGCACTGGTCAATTGCGTTGGTTTGCCTCGCG
TGCGGGGTGGGTATCGAATTGATTGTGTCCTCAAGGGAAACGTGTTCTCG
CGATCTTTTTCGTACTCTCCGATACCTCGGTACAATCTTCTTGTATTGTG
TTTTCCCTGTGCCTTCGCAGCAATAACATCATGCACCCGAAAGAGAACAA
GACGGACCGGAAATTGATGTATTCATGCAATCGGTGTACATATGAGGAGG
ATGCGCAATCGGGATCGTGCGTCTACAGGAATAACCTCATCACTACCGCA
GGGTAAGACATGGTGCAGAAGAGAGATCGAGGCAGTATTTTCTATTGTAC
AAGGCGTACAGTTGTTGCTTGGAAACATTTTTCTGCCGTGTTTGCACCAT
AGTACGGTGCCATCGTTTTGTTTCCAATGTACATGTAGAGACAGCCATGT
AAACACATGGATCTACCGATACTGAAACCGATTGTTCGAGTGCGGTGGAC
TGTTGGTGTTATGGTTAGCTCTTGTTTCTACAACAGCACACCTGTGACGA
AAGCAAGGGTTGTTCTAAATGGGGTGGGGGTGGTGCTCTTTCGTGCTTTT
GCGGCGCGTGCTCAACGGGCATATGTAATTTGTCGCCATGCCCATAGTGT
GTGCAGCTGCAAACGCACGCACGCACGCCTTCAGCCTGCGCGGTTGTCAT
ACGGGTATTGTTTGCAAGATGAGAACACGCAGACTCGAATTACGTTTGGT
CATCGAGATAGTACATCCTGATGAAAAGTCTCCCGTATCTTGAAGCTACT
GCAGGTCCAGTGGTGTCCTCCGGTATGAAATGTGTCTCAAACTCGTCTGT
GGCAAACTTCCCACTCAGTGGCGGTATGTTCATGGTTCGTCGCGGTTGCT
GCTGGAACGCCTAAGTGTGGCAAGCTTGTTCCCAACATGCAATATGCATG
GCGCTGGCCGTCTTTTGCTGTTTTTCGCCCATTCGTGTCAGGAATAAGCT
AGATATTGTGCAGACCGATGTCGTGGACGACCCCACCTTGCAACGAAGCA
AGAATGCCATCTGCGAGAAATGCAACTACAACGAAGCCGTCTTCTTCCAA
GCAGACGAGGTGCGTCCCTAGCCTAGAACTGAGACATATCGTTCCAAGTG
TGATACATCACGAGTGTCGCCCCTGACGTTAAGTGCAAAAAATGTTGGAT
GGGTGCGTTACGGATATGTTCCTGAGAACGGCGCAAATAGTGAATCGCAG
ACAAGACCCTTACAGATGCAGAACATGCTCTTTTCAAGTGTTCTCTTTCA
CGCCGATGGATTTGATGCGAGTCGGTGAATATAGCACAAGGAGCGAACGC
AAGGCGTAGGTGCTGTTGACGCAATCGGTAGCTGGGAGCCAGAACGATAG
GTATGGGGGCTTTCACCGCACATAAGTAGGGTATACGAACAACGCCCCTT
CGGCAAGCCAACACAAGAAAAAGTTGATTATGCGAAATGGTCCACGACAG
AGAACTAATAGGATGGTTGCCCAGCGCTCCTATCCCTTTGCACGCCACGG
ATGCTGCCCGATGGGCTCTGGCGTATGCGTATCCGCCACCGTTGCTCATT
GATGGGCAGTGCTGTTGAGTGCTAAGCGTTTGGCTGTCGAGTGTAGGTGT
CTGTGTTCCTCCGCCGGTGGTGTATGTTTGACGCTCTAGCAGGGAGCGGA
TGCAACGCCGGCAAGTCCTCTGCTGATTAATCCATGCCCATAAGCCCAAC
GGACGCTCGCCTGCCCACAACAGACCCGCGTGCAGTCGCGCTTTTCACGT
TACTCAAGAGCAGATGCAGACTACGTAGGGTGTAGTTCTTTGCACCCTAG
GTGGCGTTTGCGAGAGCAATGCAGCAGTAGTATTCCATGCCATGCATTTC
GGTTGTGATTGGTTTATTTTTTGTCTTTCTTGCGTTTTTAAAGTACGCGC
AGTCACTGTCGCGCTATTCAGTGAGTGAAAGCTCTTTCTGTGTCAGAAAA
CGCAGATGTACAGAACACACAACGGTACATACCAAATCAACGATCATCTG
CGCCAATTTTCATCTTGGGACTCGCGTCACTCCGCTTTGCTGCGTAAGCC
GCAGAGAAACTTGTACTTCGAAGTATTAAATATCTGTTTCATACTAGGGT
GATGTGTCTTTGACCTCTCTAGATTTGTAATCATGCGCTCTCAACGCTTA
TCGGGGCTGTTCGGGGCTGTGTTTCGCTGGAATTTCTGTCGGAACCTGTC
CGTCGCTACCCAACTCCGTAGCATGTGGAAATCGCTCCGCTATCTTCCAC
GGGGTCGGAAAACGAGTGACGTTGGCATTTTGACCGAACGGTTTGCACTG
CGTTGTGGCGGAATCCACTGTAAAACCCAAGAAAAAATATCGCGCTCCGA
ACTGCAACAAAATCACGCTATGATCGCATGTATATCGTTTCATCCACGAA
TATTGGGGCAGTTTTGTTTTTGTTCCGACGCAAGCAAAACCGCCACCCGT
GCACAACAACACGCACTGCGTGCGCACGGGGAATCTGTATTGATATCAAC
TGTGGTTCCATTTCGATTTATTTAGCCTGAACATGTTTTCACGAAATCAC
AGACAAATCCTCTGTTCTTCGGATACCCGTATTATTTCTGCGTATTCTCA
TGTGGACGTCGCCGCGTCCGTAGACTCCGAAGTATCCATAACACCCTTCC
AGAGAACGAGGCACCGTCGCCGAGGCCACGATTCGCACCGTTTTCCCACG
GAGTGGACTAAACCGCTTGGTGATATTCCAATCCGAATAGGATTGGTTTC
TGCTGCGGGAAAAAAAACTGTAATCTTGTCCGCGACATTTTGAGTCCCCT
AGCAATTTATCTCAGCTAACGGAAGCTACGCGAACGAAATCGCGGCGGTG
CCTTCGCGCGACCTACGCCTCGACGGTCCTGTCCAAGGAATTTCAATCGA
AGGAACACCGGTGCCAAACGCAAGCATTGTTGCCTCTTGCTTCTGCCCAC
ATCAGCATCCTGTTGACGCATTTTTAGTGTGTCTGCTTTTTGCTATTCTT
GGCTGCGGCTGAATTCTCTGAGCTCAACCAACTACGACGACGGGTTCGCG
GCCCTGCCTCCGCACACACGAGCCCTCGCCAACGCACCGAGCGTTTCACG
TCGCATCGCAGTCAAACCCTCGGAGAAGTACAGAACAACCCCTCACGAGC
GCTGCGCGCCTGGAGGCCAAATCCACGCTTTTGTTCCCCGCGACGTCTTC
CACAACCGAGGAAGATACAGCCCTATGCTAGCCGCAGCTCGATGCGCTAA
GATAGAATACGCATGCTCCCCAAGTCTCGGGAACGCTGGTGGCGAGCAAA
GCGAGCACGGCTAGAAAAAGCGATTCGGCCAAATCCGGCTGCTATTCCGC
CCTGTGCAGAAGAAAACATTTTTTTCGTATGGAGAACTCCCCAGCCTGCT
CACCGACGTCCACCAAACTGTGAGTCACGATGACCCAGTATTAATAGACA
CAACTGTGTGCCATAAAGCCACCCGATCTGCGCACCGCGTGCGACAGCAC
AGTTCGACACCCAGCGGCCGATCTCGCTTGCCAGCAACAATAAGACACCA
ATTTGTCAACACACACTGGCCCCTTCAACATAACTCTTATATCGATGTGG
AGCTAGAACTACACTGTGCTCGATGCGCATGCCTTTGGCGCGTGTCCCAC
ATCGGATCACGACGCACAAGCAAGGTTTTCCCTAGGGGGGGACGCAAGTT
GCAACGTACCACTCATGGGGGTGTATATTTCCCGTCACACGCCCACTCCA
GCCGGCCCCTTGCGCTGCTTGCTGGTTGCTTCTTGCCTCATCTGCCGAGA
GGTCCTTCAGAAAACACTCCAACCGATCTTGGGACATCGTTTCGCTGCTA
GTCGGCAAAGTAAGTAGCTCTGAAATGGGCATCGAACGGGCTGCCTGCGC
ATTTGTTCAACTCGGACTATTGACGCTTGTGGGCGAGGAAAGGACATGTG
TCAAACTTCACCATCAGCAAGCTCTTGTTTGGACTGCCTTTTCGCTTTTT
CGCCGCATGTGCACCTTGAGAGGCATATCATGTCTATCTTGCCAGCCTTC
CACAAGCAACCATATTGCGATACATCAGCCCTCCCTGCATCTAATCTGCA
CATACAGTGTCGGGCGTGCTTTAGTAATCACCTGTGCGCGACACACTCCT
ATTTTTCGGTGCGTGTCGAGTGTGTCTCCAACTGAACACTCTGTACTGAA
GTAACGTTTCCTACAAGCACACCCTCAACCTTTTTTTGTCTCTCTCCGTC
GATCAAACCGTAAACGTTCCAAAATCCAAGTCTAATTCAAACTCACCTCC
TGGCTCATGGCGCACGGCAGCCCCGCTCTACATACCGCTGTGGTTGATGC
ATGCACTGGACTGCCGGTGGCCTCTCTTCTACTTATTTGTGATATCCAAC
AGGACGACCCCACAACGAGAGTTGTATATAGTACTCCTTCTGCCCCGTGT
ATTGGTGTTGTACTACGTTCTGCTGCTGGACATGAAAATCCATCCAGCGG
CTCCGGCGCCGATATGTCATGTATCTATCTACATAGCCATGGAGAAGAAG
TTGTACGCAGATCCGCTGTATTACTGCTGTATACGCGATGTACGTCTTTG
CACAATACACACTTACTTTGTCCAAGCAACTTTGTGCATCTCTCGCCAGC
CTCCATAGCCTCTATAGAAAACGAGGCGGTCACTACAGCAGCAGCAGGCA
CTGTACAAGTGCAGTGAGAACGGATCGCTCCGAAACGCACCTTTTCGTCA
TCCATGACCACCAGACAGACCCTAAAACCAACGCACAACAACAGAGGCTA
TTCGTGCATGGTGTGGAAGAAAGGAGGTCTGCTCTCAAACAAGAGAAGAG
GACGAACGCTCGCTCGCTCCCTTTTTGGCCGTTGGAATTTTACGGGGCAA
GAAGCGCGGATCTCAATTAAGCACCGCCTCTGTCTGCATACACATGCTGC
TCCAATAATCGCTTATATTCTCTGGATATGATATCTCTATGTGTGCCGCT
TTTCATAAGGCAGCAGCAGTATTCCGATTTCTTTCTTGACGCCGTCGCTG
AATATACATACATACAGTACATGCATACAGGTGCGGCGACAAGCAAGATG
AAACGAAAGGAAAGCGGACCTCGGATTGAAGGCAGCCCTCCGTGAGCTCG
GAAATTTATTTAGAAAAACCTCTACTGTCCGCTCCGTGTCCGAAGGAGAA
TAATCCGTTGCTCTCCTCCACAATTTTCAAGTCAGCGAAACGTTCCGCGG
AGATACTGTCAGCCTTCCTGCCGTACCTTGGCGCTCATCATCGACCTTTG
TTTCCCCACACTGTGACAGATGCGCGTTTCCCCTGTACTGGCCACGGGTG
TCGAGTCAAGGCAGATTGCATGATGACCGGTGTTTCTAGTACCCGTTTCG
CCCCCATTCCCCCTCTGATTCCTTACTTTTTACAGTACCAAGAACTTCTC
CGGTTGGATCTAAAACCTGCTGGTTTCGTTCCCATCGTGTCTGATGTGAC
CGTGCCTGTTGTTTGTTGCATTCCCACCCCACGTTTTTCTCAGGGAGCCA
AATCGCAGAGCTTATCATTGATTTTCGTGTGCACCAACCGGGCTTGCGGG
CACAAGTGGGTCAGCTGATCGCCCTCGGCCATGCACAAGCGGCTGTCTTG
CTACAGCCACCAATCTTGAGAAGCACGGGGATAGGATTGTACCGCGACTG
CGGTTTCGGATCCCGAAATGTCGTTTGTACCGCGTCTCGAGTCAAGTAGA
AGTATAACTCTATCGGCCTTTTTGCGTTGTGTGGGGTATGTTGGAGAAGC
GATTGTGCAGAGTTCAGAACGACCTTTACGGCGAAGAAAACTATAGCAGT
AGCAGCGGTGGATCCAGCGCAGCAGTAGCACTGCTGAAGTGTACCGTGTG
CTGCTAGCTTGATGCAACGGGGTACAGCATATAAGCGAACACCGGTACCA
CCAAAGAATCCAGCTTGATTAAGATGTGATGCATTGGCATGTGAAACAGA
GGTCGACACGAACCAAGCACACAGACGATATGTTGTTGTTCTGCGGGCAT
CTATTTCACGAGTAGTGAAAGGAGGGGACGTAGGGGTAGTCTTCGTTCTG
GGTGTAGCCAAAACTGGAGATGTAAATAATGAATACCGCAGTATATCCTG
CCGCTCATTTTTTTCTCACCTGAATTGCGATCATTTCGCGACCTGTGTGG
CATGAAAGACGTCTGTCTGCATGCGTCACGCTACCGGTGCATGATAGTGT
GCGGATGGCAGTATGTGGCGACAGAAGGGCGCATGTCACCGCGTTCATTG
TTGTTGGGGGTGTTAGTTTCGTCGTCTCGCAATAAAACGTGCGTGTAGCT
GAATGGCTTATGTAGGCGATGATTGGGTTGAGACCTCCGCAGCCGCACAA
CAGTAGTCCAAGAGCAATAGTACCACAATTAGTTCGAAAGAGGTTGCCTT
TCTTTAGAGGAGTTAACACGGCATGCAGAGACCTCACGAGTATCTGCG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1085:14343..23390-

>mRNA_Ecto-sp9_F_contig1085.738.1 ID=mRNA_Ecto-sp9_F_contig1085.738.1|Name=mRNA_Ecto-sp9_F_contig1085.738.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1230bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1085:14343..23390- (Ectocarpus species9 EcSCA_722f female)
ATGCTACCCCCCACCCCTCCCTGCTGGGCCTCTTTATCTATAAACACGCC
AAAGGTATTATTGTTTGCGTCGCCCCCATCGTCGCAATCGCCGCGCCGTT
GCGCGTGTGTGCTGTGTGTGTTTCCAACCGCACACACCACCAGACACGTA
CCGCACAGCCCTCCGCCGCGGCCAGCAGGAACCTCTCGCGTAGCTTTGCT
CCAGCGGGCATCCCACTTGTACGCAGGGCTCTCGTTGTGGCGACATCGTG
GGATCAAAAATGCTACCCCCCACCCCTCCCTGCTGGGCCTCTTTATCTAT
AAACACGCCAAAGGTATTATTGTTTGCGTCGCCCCCATCGTCGCAATCGC
CGCGCCGTTGCGCGTGTGTGCTGTGTGTGTTTCCAACCGCACACACCACC
AGACACGTACCGCACAGCCCTCCGCCGCGGCCAGCAGGAACCTCTCGCGT
AGCTTTGCTCCAGCGGGCATCCCACTTGTACGCAGGGCTCTCGTTGTGGC
GACATCGTGGGATCAAAATGGCGGATACTATGCGATTCTGCAGCGAATGT
GGCGGATACTATGCGATTCTGCAGCGAATGCAATAACATCATGCACCCGA
AAGAGAACAAGACGGACCGGAAATTGATGTATTCATGCAATCGGTGTACA
TATGAGGAGGATGCGCAATCGGGATCGTGCGTCTACAGGAATAACCTCAT
CACTACCGCAGGCAATAACATCATGCACCCGAAAGAGAACAAGACGGACC
GGAAATTGATGTATTCATGCAATCGGTGTACATATGAGGAGGATGCGCAA
TCGGGATCGTGCGTCTACAGGAATAACCTCATCACTACCGCAGGGAATAA
GCTAGATATTGTGCAGACCGATGTCGTGGACGACCCCACCTTGCAACGAA
GCAAGAATGCCATCTGCGAGAAATGCAACTACAACGAAGCCGTCTTCTTC
CAAGCAGACGAGGAATAAGCTAGATATTGTGCAGACCGATGTCGTGGACG
ACCCCACCTTGCAACGAAGCAAGAATGCCATCTGCGAGAAATGCAACTAC
AACGAAGCCGTCTTCTTCCAAGCAGACGAGGGAGCCAAATCGCAGAGCTT
ATCATTGATTTTCGTGTGCACCAACCGGGCTTGCGGGCACAAGTGGGTCA
GCTGAGGAGCCAAATCGCAGAGCTTATCATTGATTTTCGTGTGCACCAAC
CGGGCTTGCGGGCACAAGTGGGTCAGCTGA
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