mRNA_Ecto-sp9_F_contig1085.735.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1085.735.1 vs.
Match: AAA (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE55_ECTSI) HSP 1 Score: 801 bits (2069), Expect = 2.120e-287 Identity = 428/496 (86.29%), Postives = 430/496 (86.69%), Query Frame = 1
Query: 559 VQAEVEARFAAEQQNEDVMLRKIQAQ------------------------------------------------------------GEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHVAKCLVSFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIGTGWGLFSKLSWWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMRAATEH 1866
VQAEVEA+FAAEQQNEDVMLRKIQAQ GEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLH AKCLV FICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELH LFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIG GWGL SK+S WWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMRAATEH
Sbjct: 19 VQAEVEAKFAAEQQNEDVMLRKIQAQVINTKTYAFILGLAKDTWCRCLFLLNRRLACTLLGRNPVDSNGFGNMRTEVTSSLPSESLGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHAAKCLVRFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHSLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIGAGWGLSSKISGWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMRAATEH 514
BLAST of mRNA_Ecto-sp9_F_contig1085.735.1 vs.
Match: AAA (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZK9_9PHAE) HSP 1 Score: 652 bits (1683), Expect = 1.320e-228 Identity = 377/519 (72.64%), Postives = 393/519 (75.72%), Query Frame = 1
Query: 559 VQAEVEARFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHVAKCLVSFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRL----------------------------------------------------------------AACSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDS------LLF----PIPDRKSR------AQLLV---QYFHKYCATGKDGRSIGTGWGLFSKLSWWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMRAATEH 1866
VQAEVEA+FAAEQQNEDVMLRKI+AQGEEDRRRTQEAINTVLAHLASAVYGLVSDPR A W L+ QLLETYLGKPSLVRETSRVGTLRSTNH LLHVAKCL+SF C+KAGKASLEGEGWSPKRTRSGREEA+NAFRDVVLAPDLKEQVLSLAVATRN+KRNGAPYRHLLLYGPPGTGKTMVAKRL AA SGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAE +++ L+ + LLF + DR ++LLV QYFHKYCATGKDG SI TGWGLFSKLS WWRGSSAEGLTIDVGVDE LVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDG+VTADMIKRVATQKAKEHGAKV MRAATEH
Sbjct: 18 VQAEVEAKFAAEQQNEDVMLRKIKAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRWAKK--PW---------TLEASMRRTGQLLETYLGKPSLVRETSRVGTLRSTNHCLLHVAKCLISFKCKKAGKASLEGEGWSPKRTRSGREEAMNAFRDVVLAPDLKEQVLSLAVATRNAKRNGAPYRHLLLYGPPGTGKTMVAKRLVSGLSNLSRSLEDGLDADPCCWNPSKRMLPRLFRHLSEFPRQGCQERLSKHSFTGTMRKTSCFQAAYSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAE-VNKHQLEVSSTAPGPGGHLLFIRSIVLHDRTVLLLVHVVSRLLVSLSQYFHKYCATGKDGSSIDTGWGLFSKLSRWWRGSSAEGLTIDVGVDECLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGMVTADMIKRVATQKAKEHGAKVNMRAATEH 524
BLAST of mRNA_Ecto-sp9_F_contig1085.735.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U6_9STRA) HSP 1 Score: 359 bits (922), Expect = 1.700e-114 Identity = 211/409 (51.59%), Postives = 260/409 (63.57%), Query Frame = 1
Query: 640 EEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHVAKCLVSFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCAT----GKDGRSIGTGWGLFSKLSWWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSE-DGVVTADMIKRVATQKAKEHGAKVKMR 1851
EEDR+R EA+ TV HLA+ V L+SDP +A + +WLLGL AGY +L+E L +++ LG+PSLVRETSR GW K E+A KEQVLSLA ATRN+++N AP+RHLLLYGPPGTGKTMVAKRLAACSGMD A+MSGGDV PLGK+AVTELH LF WA +S RG+LLFIDEAEAFLG RS +SE TRNALNALLY TG+AS M+VLATNRAEDLDEAVLDRMDDSLLFP+PD ++R QLL YF Y A+ DG G W + W G A +T+D G+ E V ++V+GFSGRE+ KL+L +Q+ +GS + +T +++RV KA EH K+++R
Sbjct: 120 EEDRKRVLEAVRTVFEHLATGVVVLLSDPMKAAAVAAWLLGLAAGYFILREAIGLCGRVISARLGRPSLVRETSR----------------------------------GWHRKS-----EDAA------------KEQVLSLATATRNARKNRAPFRHLLLYGPPGTGKTMVAKRLAACSGMDYAIMSGGDVGPLGKDAVTELHSLFAWARRSKRGVLLFIDEAEAFLGSRSSSTLSEDTRNALNALLYQTGTASHSFMLVLATNRAEDLDEAVLDRMDDSLLFPLPDVEARRQLLALYFRSYIASLVASPDDGERQGLRWLVR------WGGGCAGRITVDAGIGEDQVCSFTKQVEGFSGREISKLLLSLQNAVFGSGGEHRLTKRLMERVFELKAAEHRRKLELR 471
BLAST of mRNA_Ecto-sp9_F_contig1085.735.1 vs.
Match: AAA (domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383WCV6_TETOB) HSP 1 Score: 314 bits (805), Expect = 3.080e-95 Identity = 188/430 (43.72%), Postives = 258/430 (60.00%), Query Frame = 1
Query: 565 AEVEARFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHVAKCLVSFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCA-TGKDGRSIGTG--WGLFSKLSWWWRGS--SAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAK 1839
AE E R ++NEDV R + +E+ R+ E+IN V++HL +A L++D + L L + L G +EG + + E +LG P LVRETSR+ +R + L AK + + KR F D++L L ++V +LA N+K +GAPYRH+L YGPPGTGKTM AKRLA SGMD A++SGGDVAPLG AVT+LH F WA +S +GLLLFIDEA+AFLG+R+ MSEG R ALNALL+ TG SR M+VLATNR DLD+AV+DRMD+++ F +P R+ R++LL Y KY + G + G+G GL +LS RG +A+ + +D GV + L+ A +++GFSGRE+ K M VQ+ YGS V+T ++ KRV K +EH A+
Sbjct: 198 AEAEGRIKENRENEDVNRRAALLKYQEETRKAIESINAVMSHLGAAAVDLLTDTNKLLMLVAGGSALALGVYGAREGARVAGKAAERWLGTPKLVRETSRLALIRGPQNLLPVAAKKTLDQV----------------KRD----------FSDIILPGQLHDRVRALAATAANTKLHGAPYRHMLFYGPPGTGKTMAAKRLARTSGMDYAILSGGDVAPLGGGAVTQLHSTFDWAERSRKGLLLFIDEADAFLGRRNDA-MSEGLRGALNALLFRTGDQSRDFMVVLATNRPGDLDDAVIDRMDEAIHFDLPGREQRSKLLALYLDKYISKAGTEQGEAGSGKAGGLGQRLSMMLRGRKLAADRIAVDAGVSQALLDDAARQMEGFSGREIAKFMASVQAAVYGSAQAVLTPEIFKRVLQAKLQEHAAR 600
BLAST of mRNA_Ecto-sp9_F_contig1085.735.1 vs.
Match: ATPase (family AAA domain-containing 3-B n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V7Y2_9CHLO) HSP 1 Score: 309 bits (791), Expect = 1.510e-93 Identity = 192/427 (44.96%), Postives = 249/427 (58.31%), Query Frame = 1
Query: 565 AEVEARFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHVAKCLVSFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKY---CATGKDGRSIGTGWGLFSKLSWWWRG--SSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEH 1830
AE E R +QN+D+ ++Q + EEDR+R EAINT ++L SA GL++D R LT L L G +EGT + + + G P LVRETSR L G G +P EE F D+VL P L++ V SLA T N KR+GAP+RH+L YGPPGTGKTM AKRLA SGMD A++SGGDVAPLG NAVT+LH F WA +S RGLLL IDEA+AFL +R ++SEG+R A+NA LY TG SR +VLATNR DLD AV+DR D+++ F +P R ++L YF +Y T + G G G+F++LS + RG S E + + DE L AE++QGFSGRE+ K M VQ+ AYGS + +TA+M +R+ K EH
Sbjct: 182 AEAEGRTQERRQNKDIYREELQIKLEEDRKRLVEAINTTFSNLGSAALGLLTDRDRLLTAVGGLSLLALGVYSAREGTRSAAKAFDRWFGTPKLVRETSR----------------------------KPLVGRGAAP--VEKTVEEVKRDFSDIVLQPGLQDHVRSLAALTANVKRHGAPFRHMLFYGPPGTGKTMAAKRLAKTSGMDYAILSGGDVAPLGGNAVTQLHETFDWAERSRRGLLLLIDEADAFLSRRGG-NLSEGSRAAINAFLYRTGEQSRDFCVVLATNRPSDLDPAVIDRTDEAIEFALPGDAERHRILQVYFDQYILKAGTAQGGAGAGAATGVFARLSAFVRGRKSGPETIAVKDVADEDLWWA-AEKMQGFSGRELAKFMASVQAMAYGSHNSELTAEMFRRLVDNKVAEH 576
BLAST of mRNA_Ecto-sp9_F_contig1085.735.1 vs.
Match: AAA (domain-containing protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A836BDH2_9CHLO) HSP 1 Score: 309 bits (791), Expect = 3.200e-93 Identity = 187/427 (43.79%), Postives = 249/427 (58.31%), Query Frame = 1
Query: 565 AEVEARFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHVAKCLVSFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCA---TGKDGRSIGTGWGLFSKLSWWWRG--SSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEH 1830
AE E R ++NEDV R + +E+ R+ E+IN V+ HL A LV+D + LT L G +E T ++ + +E +LG P L+RETSR + L P +T+ E+ F D++L DL + V +A A N+K +GAP+RH+L YGPPGTGKTMVAKR+A SGMD A+MSGGDVAPL AVT+LH F WA KS RGLLLFIDEA+AFLG+RS MSEG R ALNA+L+ TG SR M+VLATNR DLD+AVLDRMD++L F +PD R +LL Y KY A T + G G G S+L W +G S+A+ + I+ G++E L+ A+ +GFS RE+ KL+ VQ+ YG+ V+T D+ + V +K EH
Sbjct: 198 AEAEGRIKEARENEDVNRRAALLKYQEETRKAIESINAVMGHLGQAALELVTDTNKLLTAVGGTTLLFLGLFATRETTRVVGRTVEAWLGTPKLIRETSRFNIWNPSTWSL-------------------------GPAKTK---EDIKKDFSDIILHQDLHDMVRQVAAAAANTKAHGAPFRHMLFYGPPGTGKTMVAKRMARTSGMDYAIMSGGDVAPLEGKAVTQLHQTFDWAEKSRRGLLLFIDEADAFLGRRSDA-MSEGLRGALNAMLFRTGDQSRDFMVVLATNRPGDLDDAVLDRMDEALEFGLPDVAERQRLLALYLDKYIAKAGTDEGGAGAGKSGGPLSRLGWLLKGRKSAADVIEIEPGINEALLAATAKATEGFSARELAKLLAAVQAAVYGAPKAVLTPDIWQAVLQRKLYEH 595
BLAST of mRNA_Ecto-sp9_F_contig1085.735.1 vs.
Match: AAA (domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I760_KLENI) HSP 1 Score: 297 bits (761), Expect = 9.510e-91 Identity = 188/430 (43.72%), Postives = 259/430 (60.23%), Query Frame = 1
Query: 565 AEVEARFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHVAKCLVSFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCA-TGKDGRSIGTGWGLFSKLSWWWRGSSAEGLTIDV-GVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKM 1848
AE E R +QNEDV R++ + E +R R AINT + + VYGL+ D + L AG +EG ++ + LE LG+PSLVRE+SR T R H L++ A A +GEG F DV+L P L +V SLA AT N+K++GAP+R+++ YGPPGTGKTM AK+LA SG+D A+M+GGDV PLG +AVT++H LF WA KS +GLLLFIDEA+AFL +R+ MSE R+ALNALLY TG SR +++V+ATNR EDLD AV+DR+D++L FP+P + R +L+ Y KY G+D RS + KL RG S + I+V G+ + L++ A + +GFSGRE+ KLM+ +Q AYGS+ +T ++ + V T K EH + K+
Sbjct: 45 AEAEGRALERRQNEDVYRRELLTKMELERERLLAAINTTFRQIGAGVYGLLGDREKLTRTVIVTTALAAGVYSTREGARVVGRYLERVLGQPSLVRESSR-ATFPFLWRRGAHSNAGLLAS--NPATDAMRKGEG----------------FGDVILHPALLSRVRSLASATANTKKHGAPFRNMVFYGPPGTGKTMAAKQLARDSGLDYALMTGGDVGPLGPDAVTKIHQLFDWAGKSRKGLLLFIDEADAFLKERNAVSMSENLRSALNALLYRTGDQSRDIVLVVATNRPEDLDRAVVDRVDEALEFPLPGEQEREKLIRLYLDKYVMRAGEDSRSS------WRKLL---RGGSDK---IEVRGITDDLLQEAASKTEGFSGRELAKLMVSMQGAAYGSQKSELTPELFQEVLTYKVAEHAQRKKI 443
BLAST of mRNA_Ecto-sp9_F_contig1085.735.1 vs.
Match: AAA (domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C325_THAPS) HSP 1 Score: 298 bits (762), Expect = 9.770e-90 Identity = 179/425 (42.12%), Postives = 256/425 (60.24%), Query Frame = 1
Query: 601 NEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHVAKCLVSFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYF----HKYCATGKDGRSIGTGWGLFSKLSWWWRGSSAEGLTIDVGVDERLVKGLAEE-----VQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKM 1848
NEDV LR+++A+ E+ R+R AI+ + HL++++ +PR+ T ++ L + +E + L+R ++E +GKP L+RET+R + S L H A+ L S+I +P R+ G +F+D++L DLK++V+ LA + RN++R+ AP+RH+LLYGPPGTGKTMVAK+LA+ G+D A+MSGGDV+PLG +AVT++H LF WA SPRG++LFIDEAE FLG R MSE NALNALLYNTG + M+V+ATNRAEDLD AVLDR D+SL FPIPD R L++ YF K+ T L S+L+ ++ + + ++ L+ GL E QGFSGRE+ KLM+ +Q Y S DG + ++ K +EH K+ M
Sbjct: 153 NEDVHLRRLKAESEQRRKRNIAAIDAIFTHLSTSLAAAAENPRQVFTFIGYVCLLTSAIFFAREMSRLIRSIIEATIGKPQLIRETTRKTMIPSI---LSHTAQ-LTSYI--------------NPWRSVKGATSIDESFKDLILPMDLKDRVMDLADSARNARRHNAPFRHVLLYGPPGTGKTMVAKKLASVIGVDYALMSGGDVSPLGADAVTQIHNLFSWAKMSPRGVILFIDEAECFLGSRESGLMSETAHNALNALLYNTGGERKDFMLVIATNRAEDLDAAVLDRCDESLFFPIPDADCRRDLILLYFDLHFRKFMETNNRNELS-----LRSQLTRYFTKQPP----LLMSIESDLMTGLQLESTVAVTQGFSGREIGKLMVALQGAMYVSADGKLDFATAWKLIETKVREHIDKLDM 550
BLAST of mRNA_Ecto-sp9_F_contig1085.735.1 vs.
Match: Atpase (family aaa domain-containing protein 3-b-like n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AST5_PLAHL) HSP 1 Score: 298 bits (764), Expect = 1.100e-89 Identity = 201/614 (32.74%), Postives = 301/614 (49.02%), Query Frame = 1
Query: 16 GEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMRAQLEEQLAFDARMHMAVDEMGKRLAEEADAQLLERKRIVEAEAEEAHLAAELEAIXXXXXXXXXXXXXXXQREALEQQLEIARRKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVQAEVEARFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHVAKCLVSFICEKAGKASLEGEGWSPKRTRSGREEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRS--RPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCATGKDGRSIGTGWGLFSKLSWWWRGSSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEHGAKVKMR 1851
G I L+N +VDK ++M+N+ A Q+L + +L A ++E+ K L +E QL++++ IVE E + E I + + +++ + +++ + +V+ R ++ N+D+ + ++Q + E DR + +A+ +L + L+ D + + L AG + +E L+ +++E LGKPSL+RETSR + + FI W K N VVL L +VL +A +TRN+ ++GAPYRHLLLYGPPGTGKTMVAKRLA SGMD A++SGGDV PLG +AVTELH LF+WA SP G+L+FIDEAEAFLG R+ + MSE RNALNALLY+TG+ S++ M+V+ATNR EDLD AV DR+DD+L F +P+ R +LL YF++Y A KD + + R S I +D +++ E +G SGRE+ K+ML +QS Y + VVT ++ RV +K EH K++++
Sbjct: 6 GRGKIVLQNFHIVDKDALYMHNLGATQQLIINLRDQKDELVALRELTAAQQHKIEELQKHLEQEVSVQLVQKRLIVETELAQTEKKIEEAKIRGNEERTTLELKRDYEMQVEKEKNVLEHQRMKQQDIVRRDQNRELVQMQEESNVRLERARRKTEEVLKEKQLAADHERALLERNTTLMKAEIDVDGRIRQQRVNQDIEMAQLQQRLEADRVKLMQALQATFDNLGQGISILLVDKEKLFKFVGAFVALAAGIYLSREAIHLMGKVIEQRLGKPSLIRETSRTSGM--------------IGFI----------NALWRRKPVNEQ-----NELAGVVLQKSLATRVLEIARSTRNAMQHGAPYRHLLLYGPPGTGKTMVAKRLARTSGMDYAILSGGDVGPLGSDAVTELHALFQWANSSPNGVLIFIDEAEAFLGCRATRKTHMSEAMRNALNALLYHTGAQSKKFMLVVATNRPEDLDTAVTDRIDDTLHFDLPEINERLRLLQMYFNEYVAHLKDPKML--------------REKSKTICEIACAMDSKVMTQYGEITKGMSGREIAKMMLYLQSIVYAQDQAVVTPQLVDRVVKEKVNEHQRKLELK 576
BLAST of mRNA_Ecto-sp9_F_contig1085.735.1 vs.
Match: AAA (domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YAD5_9CHLO) HSP 1 Score: 300 bits (767), Expect = 1.190e-89 Identity = 184/431 (42.69%), Postives = 246/431 (57.08%), Query Frame = 1
Query: 565 AEVEARFAAEQQNEDVMLRKIQAQGEEDRRRTQEAINTVLAHLASAVYGLVSDPRRALTLTSWLLGLLAGYMVLKEGTLLLRQLLETYLGKPSLVRETSRVGTLRSTNHRLLHVAKCLVSFICEKAGKASLEGEGWSPKRTRSG----REEAVNAFRDVVLAPDLKEQVLSLAVATRNSKRNGAPYRHLLLYGPPGTGKTMVAKRLAACSGMDCAVMSGGDVAPLGKNAVTELHGLFRWAAKSPRGLLLFIDEAEAFLGKRSRPDMSEGTRNALNALLYNTGSASRRLMMVLATNRAEDLDEAVLDRMDDSLLFPIPDRKSRAQLLVQYFHKYCA---TGKDGRSIGTGWGLFSKLSWWWRG--SSAEGLTIDVGVDERLVKGLAEEVQGFSGREVEKLMLGVQSCAYGSEDGVVTADMIKRVATQKAKEH 1830
AE E R ++NEDV R + +E+ R+ E+IN V+ HL +A LV+D + LT L G +E T ++ + +E +LG P L+RETSR W+PK G +E+ F D++L +L + V +A A N+K +GAP+RH+L YGPPGTGKT+VAKR+A SG+D A+MSGGDVAPL AVT+LH F WA KS RGLLLFIDEA+AFLG+RS MSEG R +LNALL+ TG SR M+VLATNR DLD+AVLDRMD++L F +P R R ++L Y KY A T + G G G ++L +G SSA+ + I G+ E L+ A +GFSGRE+ K M VQS YG+ + V+T + + V +K EH
Sbjct: 198 AEAEGRIKEARENEDVNRRAALLKYQEETRKAIESINAVMGHLGTAALELVTDTNKLLTAVGGTTLLFLGIFATRETTRVVGRTVEAWLGTPKLIRETSRFNV--------------------------------WNPKSWSLGPVKTKEDIKKDFSDIILHRELHDTVRQVAAAAANTKAHGAPFRHMLFYGPPGTGKTLVAKRMARTSGLDYAIMSGGDVAPLEGKAVTQLHQTFDWAEKSSRGLLLFIDEADAFLGRRSDA-MSEGLRGSLNALLFRTGDQSRDFMVVLATNRPGDLDDAVLDRMDEALEFGLPGRDERQKMLALYLDKYIAKAGTAEGGAGTGRSGGPLARLGSLLKGRKSSADTIAIAEGITEALLAETAAATEGFSGRELAKFMAAVQSAVYGAPEAVLTPAIWRAVLERKLYEH 595 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1085.735.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1085.735.1 >prot_Ecto-sp9_F_contig1085.735.1 ID=prot_Ecto-sp9_F_contig1085.735.1|Name=mRNA_Ecto-sp9_F_contig1085.735.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=623bp PPHEQGEPPITLENQAVVDKSVIFMNNVAAVQELAERNEAMRAQLEEQLAback to top mRNA from alignment at Ecto-sp9_F_contig1085:74..7762+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1085.735.1 ID=mRNA_Ecto-sp9_F_contig1085.735.1|Name=mRNA_Ecto-sp9_F_contig1085.735.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=7689bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1085:74..7762+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1085:74..7762+ >mRNA_Ecto-sp9_F_contig1085.735.1 ID=mRNA_Ecto-sp9_F_contig1085.735.1|Name=mRNA_Ecto-sp9_F_contig1085.735.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3738bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1085:74..7762+ (Ectocarpus species9 EcSCA_722f female)back to top |