mRNA_Ecto-sp9_F_contig10848.733.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1C0_9PHAE) HSP 1 Score: 508 bits (1307), Expect = 1.160e-178 Identity = 285/368 (77.45%), Postives = 289/368 (78.53%), Query Frame = 1
Query: 1 MGNASSHAYYGAAPPPAADARVILQHDLPKVIYVKRLANGKFIKSYQCRVDGIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFYSVPQASDASTTGDGAASGGTXXXXXXXXXXQQXGGVVAGAAQXXXXXXXXXXXLDGLEASVIQPGPDGLNTDSTKSASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGEGLLESMDVFSLGCVIAEV 1104
MGNASSHAYYGAAPPPAADARVILQHDLPKVIYVK+LANGKFIKSYQCRVDGIMVVVKAYIKRDKRE LAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPH+NAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKG+RHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFYSVPQASDASTTGDGA SGGTXXXXXXX QQ GVVAGAAQ XXXXX LDGL SV +P P APGEGLLESMDVFSLGCVIAEV
Sbjct: 1 MGNASSHAYYGAAPPPAADARVILQHDLPKVIYVKQLANGKFIKSYQCRVDGIMVVVKAYIKRDKREVLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHRNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGIRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFYSVPQASDASTTGDGATSGGTXXXXXXXGTPQQAEGVVAGAAQTKAGXXXXXG-LDGL-VSVGEPYP---------------------------------------------WSRCPMALAPGAPGGGGAPGEGLLESMDVFSLGCVIAEV 321
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST98_9STRA) HSP 1 Score: 214 bits (546), Expect = 2.060e-62 Identity = 117/235 (49.79%), Postives = 154/235 (65.53%), Query Frame = 1
Query: 1 MGNASSHAYYGAAPPPAADARVILQHDLPKVIYVKRLANGKFIKSYQCRVD-GIMVVVKAYIKRDKREDLAPVEAC--LSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQG--RCYLAPERFYSVPQASDASTTG 690
MGN++ H G++ +D R LQ+DLPK I K++ GKF+K++ C+V+ G+ +VVK Y+K D D A + A + + L+ PNVLPYQ + R+ AG YLLRQH +L DRLSTRPFL+ EK+W+VY L +A QCH GV HGDIKSENV+VTS W++LTDFA FKPT+LP+D P D N+YF+S E G RCYLAPERFYS +++A T G
Sbjct: 1 MGNSAPHVKPGSSGA-VSDPRNYLQYDLPKFIIQKKMGAGKFMKAFLCKVEEGVPMVVKVYVKHDGETDEALLRAKEGVEEIQTRLNPYDHPNVLPYQSSVVGAQRSGRFTGAG---YLLRQHFYTSLYDRLSTRPFLSTVEKKWIVYQLFKALIQCHDSGVCHGDIKSENVMVTSWTWIILTDFASFKPTYLPEDDPTDFNHYFASAEHGQHRCYLAPERFYS--SSAEAETQG 229
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RBG5_9ARCH) HSP 1 Score: 197 bits (500), Expect = 2.570e-57 Identity = 103/234 (44.02%), Postives = 137/234 (58.55%), Query Frame = 1
Query: 49 AADARVILQHDLPKVIYVKRLANGKFIKSYQCRVD----------------------------GIMVVVKAYIKRDKRED-----LAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERF 651
+AD +LQ++ ++ ++L GKF+KSY C+ D + V K YIKR++R + + L + +A + PN+LPYQRW SP A AYL RQHL +L +R TRPFLT +EK WL+Y LLRA AQCH +G+ HGDIKSENV+VT+ W++LTDFA FKPTF+PDDHPAD +Y+F SG + RCY+APERF
Sbjct: 12 SADGHFLLQNEWSAIVTKRQLGKGKFLKSYACQRDPRGHGKVGAGAAGSATAAEDDAAAARSSDSLFVCKVYIKREERGNDTQRRIGVAREQLGQLGRAFTLQRQPNLLPYQRW-----EGSPKMGA---AYLFRQHLAHSLYERCHTRPFLTRSEKMWLIYQLLRALAQCHARGIAHGDIKSENVMVTAWGWLMLTDFALFKPTFIPDDHPADFHYFFESGTRRRCYIAPERF 237
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPT4_9STRA) HSP 1 Score: 209 bits (533), Expect = 1.150e-56 Identity = 103/199 (51.76%), Postives = 129/199 (64.82%), Query Frame = 1
Query: 55 DARVILQHDLPKVIYVKRLANGKFIKSYQCRVDGIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERF 651
D R+ Q+DLPK I ++ NGKF+K+Y RVD VVVK Y+K + + L P A L+ M K L PN+LPYQ W++S R + K A TP YL+RQ+ L DRLSTRPFL + EK W+VY L + CH G+ HGDIK ENV+ T+ NWV+LTDF+PFKP +PDD P D YYF + RCYLAPERF
Sbjct: 30 DLRIYFQNDLPKFILQAKVGNGKFMKTYVMRVDSAPVVVKVYMKLNDEDLLVPA-AHLTIMWKTLSPAKYPNLLPYQMWIKSTARFN--KTAATPIYLIRQYFSSNLYDRLSTRPFLNELEKLWIVYQLFKCLEICHEHGIVHGDIKPENVMCTTSNWVILTDFSPFKPAIIPDDDPTDFQYYFDCMGRHRCYLAPERF 225
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RU35_9ARCH) HSP 1 Score: 189 bits (481), Expect = 3.240e-55 Identity = 94/194 (48.45%), Postives = 122/194 (62.89%), Query Frame = 1
Query: 70 LQHDLPKVIYVKRLANGKFIKSYQCRVDGIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERF 651
+Q DLPK + + NGKF+KSY RVD +VVK Y+K EDL L+++ + + PN+LPYQ W++S AS K +P YLLRQ+ L DRL +RPFL E+ W+++ L + CH G+ HGDIK ENVL T+ NWV+LTDF+PFKP LPDD P D YYF S + RCY+APERF
Sbjct: 26 MQVDLPKFVKQSMIGNGKFLKSYIMRVDSTQLVVKIYMKLPD-EDLQIATMQLTSVLRTIPPSKYPNLLPYQMWIRS---ASTRKTPASPVYLLRQYFHFNLYDRLFSRPFLNTLERLWILFQLFKCLEICHELGIVHGDIKPENVLCTTSNWVVLTDFSPFKPVLLPDDDPTDFQYYFESVGKHRCYVAPERF 215
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R9T1_DUNTE) HSP 1 Score: 196 bits (498), Expect = 7.250e-55 Identity = 101/210 (48.10%), Postives = 134/210 (63.81%), Query Frame = 1
Query: 79 DLPKVIYVKRLANGKFIKSYQCRVD-GIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFYSVPQASDASTTGDGAAS 705
DLP V+ L G+F+K+ C D G +VVVKAY KR L P + L+ + +L CP+V P+Q W+ + + YL+RQHL L+DRLSTRPFLT +KRW+ + LL A AQ H G HGDIK+ENVL+TS +WV L+D+APFKPTFLP D+PA+ ++YF +G + RCY+APERF+S AS T + AAS
Sbjct: 18 DLPNVVLKDTLGRGRFLKTLLCLHDEGGLVVVKAYYKRADSPSLGPYKQQLARLRASLHGLPCPHVWPWQAWVDT----------ASAGYLMRQHLASGLNDRLSTRPFLTHAQKRWIAFQLLHAVAQSHEAGCCHGDIKTENVLLTSWSWVFLSDYAPFKPTFLPADNPAEFSFYFDTGGRRRCYIAPERFFSTA----ASNTSNSAAS 213
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Armadillo-like (helical (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699HXK4_TANCI) HSP 1 Score: 183 bits (464), Expect = 2.060e-52 Identity = 89/182 (48.90%), Postives = 115/182 (63.19%), Query Frame = 1
Query: 109 LANGKFIKSYQCRVDGIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFY 654
L +F+KS QC+ D +V+VK Y KR DL E L+ + + P+V P+Q WL++D AYLLRQ+ L DRLSTRPFL+ EK+WL + LL A QCH G+ HGDIK ENVLVTS NW+ L DFA FKPT++P D P+D +++F +G + RCYLAPERFY
Sbjct: 5 LGRARFLKSIQCKHDEGLVLVKVYFKRGDSSDLREYERKLARIREVFSRIENPHVWPFQFWLETD----------KAAYLLRQYFFNNLHDRLSTRPFLSLVEKKWLAFQLLYAVKQCHDNGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDDPSDFSFFFDTGGRRRCYLAPERFY 176
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Armadillo-like (helical (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699HWM0_TANCI) HSP 1 Score: 183 bits (464), Expect = 3.180e-51 Identity = 89/182 (48.90%), Postives = 115/182 (63.19%), Query Frame = 1
Query: 109 LANGKFIKSYQCRVDGIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFY 654
L +F+KS QC+ D +V+VK Y KR DL E L+ + + P+V P+Q WL++D AYLLRQ+ L DRLSTRPFL+ EK+WL + LL A QCH G+ HGDIK ENVLVTS NW+ L DFA FKPT++P D P+D +++F +G + RCYLAPERFY
Sbjct: 5 LGRARFLKSIQCKHDEGLVLVKVYFKRGDSSDLREYERKLARIREVFSRIENPHVWPFQFWLETD----------KAAYLLRQYFFNNLHDRLSTRPFLSLVEKKWLAFQLLYAVKQCHDNGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDDPSDFSFFFDTGGRRRCYLAPERFY 176
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBY9_9STRA) HSP 1 Score: 178 bits (452), Expect = 1.430e-50 Identity = 102/235 (43.40%), Postives = 140/235 (59.57%), Query Frame = 1
Query: 43 PPAADARVILQHDLPKVIYVKRLANGKFIKSYQCRVDGIMVVVKAYIKR----------------DKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTP-AYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGE-QGRCYLAPERFYSVPQASDASTTGD 693
P D R+ L+ +L ++Y ++L +GK +K+Y+C+ VVK + R +++ L A L+ + L PNVLP QR H+ P A+L+RQH+ +L +R+STRPFL+D EKRW+ + LLRA AQCHG GV HGD+KSENVLVTS NWVLLTDFAPFKPT LP+D +D +Y+F +G + RCY+APERF S + +GD
Sbjct: 10 PLQVDLRLCLE-ELNDLVYREQLGHGKLLKTYRCKGGQGAAVVKVLVIRSDAVGQSTRAAKEFAEEEKRTLELANAQLAELRARLSPLLHPNVLPMQR---------VHRARNHPCAFLVRQHVQWSLYERISTRPFLSDVEKRWITFQLLRALAQCHGAGVVHGDVKSENVLVTSWNWVLLTDFAPFKPTRLPEDDHSDFHYFFDAGSGRRRCYVAPERFDSAAKGFFTPRSGD 234
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Phosphoinositide (3-kinase regulatory subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEE2_PYTIN) HSP 1 Score: 191 bits (485), Expect = 2.770e-50 Identity = 101/240 (42.08%), Postives = 146/240 (60.83%), Query Frame = 1
Query: 1 MGNASSHAYYGAAPPPAADARVILQHDLPK---VIYVKRLANGKFIKSYQCRVDGIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGR--CYLAPERFYSVPQASDASTTGDGAAS 705
MGNA+ A + A+ R L P+ +++V + +GKF+KS C+ D ++VK Y K D E L+ E L ++ A T + PN+LPY +D + S N A+++RQ+ L DR+ +RPFLT EK+W+ + +LRA QCH KG+ HGDIK EN++VTS NW+ LTDFAPFKPT++P+D PAD NYYF + + R C +APERFY +A+ ++T G +S
Sbjct: 1 MGNAAPRAQPPSQVDSASQCRTFLMDYSPRSMNIMFVSLIGDGKFLKSIYCKCDEGSLIVKIYRKFDPNESLSSAEVALRRLSLAFTTENQPNLLPY-----ADYQLSAKFNV---AFMVRQYFASNLYDRICSRPFLTAIEKKWIAFQILRALEQCHSKGICHGDIKQENIMVTSWNWIFLTDFAPFKPTYIPEDDPADYNYYFCAIDATRRGCSVAPERFYG--KATSTASTNSGVSS 230 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10848.733.1 >prot_Ecto-sp9_F_contig10848.733.1 ID=prot_Ecto-sp9_F_contig10848.733.1|Name=mRNA_Ecto-sp9_F_contig10848.733.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=368bp MGNASSHAYYGAAPPPAADARVILQHDLPKVIYVKRLANGKFIKSYQCRVback to top mRNA from alignment at Ecto-sp9_F_contig10848:119..3725- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10848.733.1 ID=mRNA_Ecto-sp9_F_contig10848.733.1|Name=mRNA_Ecto-sp9_F_contig10848.733.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3607bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10848:119..3725- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10848:119..3725- >mRNA_Ecto-sp9_F_contig10848.733.1 ID=mRNA_Ecto-sp9_F_contig10848.733.1|Name=mRNA_Ecto-sp9_F_contig10848.733.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2208bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10848:119..3725- (Ectocarpus species9 EcSCA_722f female)back to top |