mRNA_Ecto-sp9_F_contig10848.733.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10848.733.1
Unique NamemRNA_Ecto-sp9_F_contig10848.733.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1C0_9PHAE)

HSP 1 Score: 508 bits (1307), Expect = 1.160e-178
Identity = 285/368 (77.45%), Postives = 289/368 (78.53%), Query Frame = 1
Query:    1 MGNASSHAYYGAAPPPAADARVILQHDLPKVIYVKRLANGKFIKSYQCRVDGIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFYSVPQASDASTTGDGAASGGTXXXXXXXXXXQQXGGVVAGAAQXXXXXXXXXXXLDGLEASVIQPGPDGLNTDSTKSASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPGEGLLESMDVFSLGCVIAEV 1104
            MGNASSHAYYGAAPPPAADARVILQHDLPKVIYVK+LANGKFIKSYQCRVDGIMVVVKAYIKRDKRE LAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPH+NAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKG+RHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFYSVPQASDASTTGDGA SGGTXXXXXXX   QQ  GVVAGAAQ    XXXXX  LDGL  SV +P P                                                              APGEGLLESMDVFSLGCVIAEV
Sbjct:    1 MGNASSHAYYGAAPPPAADARVILQHDLPKVIYVKQLANGKFIKSYQCRVDGIMVVVKAYIKRDKREVLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHRNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGIRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFYSVPQASDASTTGDGATSGGTXXXXXXXGTPQQAEGVVAGAAQTKAGXXXXXG-LDGL-VSVGEPYP---------------------------------------------WSRCPMALAPGAPGGGGAPGEGLLESMDVFSLGCVIAEV 321          
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST98_9STRA)

HSP 1 Score: 214 bits (546), Expect = 2.060e-62
Identity = 117/235 (49.79%), Postives = 154/235 (65.53%), Query Frame = 1
Query:    1 MGNASSHAYYGAAPPPAADARVILQHDLPKVIYVKRLANGKFIKSYQCRVD-GIMVVVKAYIKRDKREDLAPVEAC--LSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQG--RCYLAPERFYSVPQASDASTTG 690
            MGN++ H   G++    +D R  LQ+DLPK I  K++  GKF+K++ C+V+ G+ +VVK Y+K D   D A + A   +  +   L+    PNVLPYQ  +    R+     AG   YLLRQH   +L DRLSTRPFL+  EK+W+VY L +A  QCH  GV HGDIKSENV+VTS  W++LTDFA FKPT+LP+D P D N+YF+S E G  RCYLAPERFYS   +++A T G
Sbjct:    1 MGNSAPHVKPGSSGA-VSDPRNYLQYDLPKFIIQKKMGAGKFMKAFLCKVEEGVPMVVKVYVKHDGETDEALLRAKEGVEEIQTRLNPYDHPNVLPYQSSVVGAQRSGRFTGAG---YLLRQHFYTSLYDRLSTRPFLSTVEKKWIVYQLFKALIQCHDSGVCHGDIKSENVMVTSWTWIILTDFASFKPTYLPEDDPTDFNHYFASAEHGQHRCYLAPERFYS--SSAEAETQG 229          
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RBG5_9ARCH)

HSP 1 Score: 197 bits (500), Expect = 2.570e-57
Identity = 103/234 (44.02%), Postives = 137/234 (58.55%), Query Frame = 1
Query:   49 AADARVILQHDLPKVIYVKRLANGKFIKSYQCRVD----------------------------GIMVVVKAYIKRDKRED-----LAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERF 651
            +AD   +LQ++   ++  ++L  GKF+KSY C+ D                              + V K YIKR++R +     +      L  + +A   +  PN+LPYQRW       SP   A   AYL RQHL  +L +R  TRPFLT +EK WL+Y LLRA AQCH +G+ HGDIKSENV+VT+  W++LTDFA FKPTF+PDDHPAD +Y+F SG + RCY+APERF
Sbjct:   12 SADGHFLLQNEWSAIVTKRQLGKGKFLKSYACQRDPRGHGKVGAGAAGSATAAEDDAAAARSSDSLFVCKVYIKREERGNDTQRRIGVAREQLGQLGRAFTLQRQPNLLPYQRW-----EGSPKMGA---AYLFRQHLAHSLYERCHTRPFLTRSEKMWLIYQLLRALAQCHARGIAHGDIKSENVMVTAWGWLMLTDFALFKPTFIPDDHPADFHYFFESGTRRRCYIAPERF 237          
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HPT4_9STRA)

HSP 1 Score: 209 bits (533), Expect = 1.150e-56
Identity = 103/199 (51.76%), Postives = 129/199 (64.82%), Query Frame = 1
Query:   55 DARVILQHDLPKVIYVKRLANGKFIKSYQCRVDGIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERF 651
            D R+  Q+DLPK I   ++ NGKF+K+Y  RVD   VVVK Y+K +  + L P  A L+ M K L     PN+LPYQ W++S  R +  K A TP YL+RQ+    L DRLSTRPFL + EK W+VY L +    CH  G+ HGDIK ENV+ T+ NWV+LTDF+PFKP  +PDD P D  YYF    + RCYLAPERF
Sbjct:   30 DLRIYFQNDLPKFILQAKVGNGKFMKTYVMRVDSAPVVVKVYMKLNDEDLLVPA-AHLTIMWKTLSPAKYPNLLPYQMWIKSTARFN--KTAATPIYLIRQYFSSNLYDRLSTRPFLNELEKLWIVYQLFKCLEICHEHGIVHGDIKPENVMCTTSNWVILTDFSPFKPAIIPDDDPTDFQYYFDCMGRHRCYLAPERF 225          
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RU35_9ARCH)

HSP 1 Score: 189 bits (481), Expect = 3.240e-55
Identity = 94/194 (48.45%), Postives = 122/194 (62.89%), Query Frame = 1
Query:   70 LQHDLPKVIYVKRLANGKFIKSYQCRVDGIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERF 651
            +Q DLPK +    + NGKF+KSY  RVD   +VVK Y+K    EDL      L+++ + +     PN+LPYQ W++S   AS  K   +P YLLRQ+    L DRL +RPFL   E+ W+++ L +    CH  G+ HGDIK ENVL T+ NWV+LTDF+PFKP  LPDD P D  YYF S  + RCY+APERF
Sbjct:   26 MQVDLPKFVKQSMIGNGKFLKSYIMRVDSTQLVVKIYMKLPD-EDLQIATMQLTSVLRTIPPSKYPNLLPYQMWIRS---ASTRKTPASPVYLLRQYFHFNLYDRLFSRPFLNTLERLWILFQLFKCLEICHELGIVHGDIKPENVLCTTSNWVVLTDFSPFKPVLLPDDDPTDFQYYFESVGKHRCYVAPERF 215          
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R9T1_DUNTE)

HSP 1 Score: 196 bits (498), Expect = 7.250e-55
Identity = 101/210 (48.10%), Postives = 134/210 (63.81%), Query Frame = 1
Query:   79 DLPKVIYVKRLANGKFIKSYQCRVD-GIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFYSVPQASDASTTGDGAAS 705
            DLP V+    L  G+F+K+  C  D G +VVVKAY KR     L P +  L+ +  +L    CP+V P+Q W+ +           +  YL+RQHL   L+DRLSTRPFLT  +KRW+ + LL A AQ H  G  HGDIK+ENVL+TS +WV L+D+APFKPTFLP D+PA+ ++YF +G + RCY+APERF+S      AS T + AAS
Sbjct:   18 DLPNVVLKDTLGRGRFLKTLLCLHDEGGLVVVKAYYKRADSPSLGPYKQQLARLRASLHGLPCPHVWPWQAWVDT----------ASAGYLMRQHLASGLNDRLSTRPFLTHAQKRWIAFQLLHAVAQSHEAGCCHGDIKTENVLLTSWSWVFLSDYAPFKPTFLPADNPAEFSFYFDTGGRRRCYIAPERFFSTA----ASNTSNSAAS 213          
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Armadillo-like (helical (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699HXK4_TANCI)

HSP 1 Score: 183 bits (464), Expect = 2.060e-52
Identity = 89/182 (48.90%), Postives = 115/182 (63.19%), Query Frame = 1
Query:  109 LANGKFIKSYQCRVDGIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFY 654
            L   +F+KS QC+ D  +V+VK Y KR    DL   E  L+ + +       P+V P+Q WL++D            AYLLRQ+    L DRLSTRPFL+  EK+WL + LL A  QCH  G+ HGDIK ENVLVTS NW+ L DFA FKPT++P D P+D +++F +G + RCYLAPERFY
Sbjct:    5 LGRARFLKSIQCKHDEGLVLVKVYFKRGDSSDLREYERKLARIREVFSRIENPHVWPFQFWLETD----------KAAYLLRQYFFNNLHDRLSTRPFLSLVEKKWLAFQLLYAVKQCHDNGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDDPSDFSFFFDTGGRRRCYLAPERFY 176          
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Armadillo-like (helical (Fragment) n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699HWM0_TANCI)

HSP 1 Score: 183 bits (464), Expect = 3.180e-51
Identity = 89/182 (48.90%), Postives = 115/182 (63.19%), Query Frame = 1
Query:  109 LANGKFIKSYQCRVDGIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGRCYLAPERFY 654
            L   +F+KS QC+ D  +V+VK Y KR    DL   E  L+ + +       P+V P+Q WL++D            AYLLRQ+    L DRLSTRPFL+  EK+WL + LL A  QCH  G+ HGDIK ENVLVTS NW+ L DFA FKPT++P D P+D +++F +G + RCYLAPERFY
Sbjct:    5 LGRARFLKSIQCKHDEGLVLVKVYFKRGDSSDLREYERKLARIREVFSRIENPHVWPFQFWLETD----------KAAYLLRQYFFNNLHDRLSTRPFLSLVEKKWLAFQLLYAVKQCHDNGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPHDDPSDFSFFFDTGGRRRCYLAPERFY 176          
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBY9_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.430e-50
Identity = 102/235 (43.40%), Postives = 140/235 (59.57%), Query Frame = 1
Query:   43 PPAADARVILQHDLPKVIYVKRLANGKFIKSYQCRVDGIMVVVKAYIKR----------------DKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTP-AYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGE-QGRCYLAPERFYSVPQASDASTTGD 693
            P   D R+ L+ +L  ++Y ++L +GK +K+Y+C+      VVK  + R                +++  L    A L+ +   L     PNVLP QR          H+    P A+L+RQH+  +L +R+STRPFL+D EKRW+ + LLRA AQCHG GV HGD+KSENVLVTS NWVLLTDFAPFKPT LP+D  +D +Y+F +G  + RCY+APERF S  +      +GD
Sbjct:   10 PLQVDLRLCLE-ELNDLVYREQLGHGKLLKTYRCKGGQGAAVVKVLVIRSDAVGQSTRAAKEFAEEEKRTLELANAQLAELRARLSPLLHPNVLPMQR---------VHRARNHPCAFLVRQHVQWSLYERISTRPFLSDVEKRWITFQLLRALAQCHGAGVVHGDVKSENVLVTSWNWVLLTDFAPFKPTRLPEDDHSDFHYFFDAGSGRRRCYVAPERFDSAAKGFFTPRSGD 234          
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Match: Phosphoinositide (3-kinase regulatory subunit n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CEE2_PYTIN)

HSP 1 Score: 191 bits (485), Expect = 2.770e-50
Identity = 101/240 (42.08%), Postives = 146/240 (60.83%), Query Frame = 1
Query:    1 MGNASSHAYYGAAPPPAADARVILQHDLPK---VIYVKRLANGKFIKSYQCRVDGIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQSDVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRAAAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANYYFSSGEQGR--CYLAPERFYSVPQASDASTTGDGAAS 705
            MGNA+  A   +    A+  R  L    P+   +++V  + +GKF+KS  C+ D   ++VK Y K D  E L+  E  L  ++ A  T + PN+LPY     +D + S   N    A+++RQ+    L DR+ +RPFLT  EK+W+ + +LRA  QCH KG+ HGDIK EN++VTS NW+ LTDFAPFKPT++P+D PAD NYYF + +  R  C +APERFY   +A+  ++T  G +S
Sbjct:    1 MGNAAPRAQPPSQVDSASQCRTFLMDYSPRSMNIMFVSLIGDGKFLKSIYCKCDEGSLIVKIYRKFDPNESLSSAEVALRRLSLAFTTENQPNLLPY-----ADYQLSAKFNV---AFMVRQYFASNLYDRICSRPFLTAIEKKWIAFQILRALEQCHSKGICHGDIKQENIMVTSWNWIFLTDFAPFKPTYIPEDDPADYNYYFCAIDATRRGCSVAPERFYG--KATSTASTNSGVSS 230          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10848.733.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Protein1.160e-17877.45kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Hypothetical2.060e-6249.79protein (Fragment) n=1 Tax=Rhizochromulina marina ... [more]
Protein2.570e-5744.02kinase domain-containing protein (Fragment) n=1 Ta... [more]
Hypothetical1.150e-5651.76protein (Fragment) n=1 Tax=Spumella elongata TaxID... [more]
Protein3.240e-5548.45kinase domain-containing protein (Fragment) n=1 Ta... [more]
Hypothetical7.250e-5548.10protein (Fragment) n=1 Tax=Dunaliella tertiolecta ... [more]
Armadillo-like2.060e-5248.90helical (Fragment) n=1 Tax=Tanacetum cinerariifoli... [more]
Armadillo-like3.180e-5148.90helical (Fragment) n=1 Tax=Tanacetum cinerariifoli... [more]
Hypothetical1.430e-5043.40protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014... [more]
Phosphoinositide2.770e-5042.083-kinase regulatory subunit n=1 Tax=Pythium insidi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10848contigEcto-sp9_F_contig10848:119..3725 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score192.2
Seed ortholog evalue4.3e-46
Seed eggNOG ortholog4787.PITG_19875T0
KEGG koko:K08333
KEGG Pathwayko04136,ko04138,ko04140,ko04371,map04136,map04138,map04140,map04371
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005737,GO:0005768,GO:0005770,GO:0005942,GO:0006464,GO:0006468,GO:0006605,GO:0006623,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006886,GO:0006914,GO:0007034,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016236,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0019898,GO:0030242,GO:0031410,GO:0031967,GO:0031975,GO:0031982,GO:0032507,GO:0032991,GO:0033036,GO:0033365,GO:0034067,GO:0034271,GO:0034272,GO:0034613,GO:0035032,GO:0036211,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044232,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045053,GO:0045184,GO:0045185,GO:0045324,GO:0046907,GO:0051179,GO:0051234,GO:0051235,GO:0051641,GO:0051649,GO:0051651,GO:0061695,GO:0061919,GO:0065007,GO:0065008,GO:0070727,GO:0071561,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072665,GO:0072666,GO:0097708,GO:0098796,GO:0140096,GO:1901564,GO:1902494,GO:1990234
EggNOG free text desc.WD domain, G-beta repeat
EggNOG OGs3QCEB@4776,KOG1240@1,KOG1240@2759
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-08_002020.1
EC2.7.11.1
COG Functional cat.T
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko04131
Hectar predicted targeting categoryother localisation
Exons5
Model size1104
Cds size1104
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10848.733.1prot_Ecto-sp9_F_contig10848.733.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10848 119..3725 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928306.4463646-CDS-Ecto-sp9_F_contig10848:118..3971622928306.4463646-CDS-Ecto-sp9_F_contig10848:118..397Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10848 119..397 -
1692277828.7455966-CDS-Ecto-sp9_F_contig10848:118..3971692277828.7455966-CDS-Ecto-sp9_F_contig10848:118..397Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10848 119..397 -
1622928306.4610806-CDS-Ecto-sp9_F_contig10848:699..9511622928306.4610806-CDS-Ecto-sp9_F_contig10848:699..951Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10848 700..951 -
1692277828.7549305-CDS-Ecto-sp9_F_contig10848:699..9511692277828.7549305-CDS-Ecto-sp9_F_contig10848:699..951Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10848 700..951 -
1622928306.4722567-CDS-Ecto-sp9_F_contig10848:1415..16851622928306.4722567-CDS-Ecto-sp9_F_contig10848:1415..1685Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10848 1416..1685 -
1692277828.7620077-CDS-Ecto-sp9_F_contig10848:1415..16851692277828.7620077-CDS-Ecto-sp9_F_contig10848:1415..1685Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10848 1416..1685 -
1622928306.484943-CDS-Ecto-sp9_F_contig10848:2592..27551622928306.484943-CDS-Ecto-sp9_F_contig10848:2592..2755Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10848 2593..2755 -
1692277828.7696497-CDS-Ecto-sp9_F_contig10848:2592..27551692277828.7696497-CDS-Ecto-sp9_F_contig10848:2592..2755Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10848 2593..2755 -
1622928306.4980078-CDS-Ecto-sp9_F_contig10848:3585..37251622928306.4980078-CDS-Ecto-sp9_F_contig10848:3585..3725Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10848 3586..3725 -
1692277828.7773106-CDS-Ecto-sp9_F_contig10848:3585..37251692277828.7773106-CDS-Ecto-sp9_F_contig10848:3585..3725Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10848 3586..3725 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10848.733.1

>prot_Ecto-sp9_F_contig10848.733.1 ID=prot_Ecto-sp9_F_contig10848.733.1|Name=mRNA_Ecto-sp9_F_contig10848.733.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=368bp
MGNASSHAYYGAAPPPAADARVILQHDLPKVIYVKRLANGKFIKSYQCRV
DGIMVVVKAYIKRDKREDLAPVEACLSNMAKALDTRSCPNVLPYQRWLQS
DVRASPHKNAGTPAYLLRQHLLGTLSDRLSTRPFLTDTEKRWLVYLLLRA
AAQCHGKGVRHGDIKSENVLVTSGNWVLLTDFAPFKPTFLPDDHPADANY
YFSSGEQGRCYLAPERFYSVPQASDASTTGDGAASGGTAGAAGVAGTAQQ
AGGVVAGAAQAKGGGGGGGGGLDGLEASVIQPGPDGLNTDSTKSASAGGG
GGKSSPRASGGSESQQQQQQQRSKKGASGREDGSRRGPAGAAGGGGAPGE
GLLESMDVFSLGCVIAEV
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mRNA from alignment at Ecto-sp9_F_contig10848:119..3725-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10848.733.1 ID=mRNA_Ecto-sp9_F_contig10848.733.1|Name=mRNA_Ecto-sp9_F_contig10848.733.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3607bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10848:119..3725- (Ectocarpus species9 EcSCA_722f female)
ATGGGCAATGCCTCATCCCACGCGTACTATGGCGCGGCTCCACCGCCCGC AGCCGACGCGCGCGTGATACTGCAGCACGATCTTCCCAAGGTGATTTACG TCAAGCGGCTGGCCAACGGCAAGTTCATCAAGAGCTACCAGTGAGTGCAA AGCTCTTGAAGCATGCCGCCGAACTGCGCGTAGACCCGCCATCGTGATGC GAGCTACAACAACAGCAGTGGTTTATGTTCCAGTACTGCATAACCGTAGA GCCACACACGCGTTTTATGAGGTGCCCCGAAACCGGAACGAGGTTCCTTG CCGAGTCTCGCTCGGTCGTCTATCTGTGTCGCAGTATCGGGAGTGGTATC CTTCTCCCCTTTGTGATGCATCTACACTACTGCTGTAGCTGGTGTCAGCC TGGTCTACTGCTGTAGGGTGTACGCTTGGGGGATTGACGTGTGTTGGACC ACAGCATCGTGCGTTGCGGCATGTGTCACTCACCTCTGGCCGTGTCCTCA AACAGAGTACAGCAATGGTCGTGTCGGAATACTGTAGCTGAAGAAAAGAA GAAAGAGAACAGAGGTCAAGTGGGGAAGCAATACGATGTCGCATAACGCG TTGCTGTGCGAAAGAGCCAGTGTCGTTCAAAGCTCTCTCTGGGTCGGCCC AGCGGTACCTTTGGGCTGTACAGCAATCTAATGCTGCTATTATGAGTTCT CGAACTCACAGCGGTTGTAGCGCTCCCGTGCATCTTTACGTTGGCACGCC GTATGTTCAAGTCGTCGAACAGGGAGGTGTCTTGAAGGACTGCCAGGCAT AATGGTACGGCGAGAGGTTGCTGCGGCCCCTTGGCATGTACCACCGTCCA GCAGTTCGTGTACACGTAAATCTTCGATTATCTAATGCTTTTGGGCGCGC CGTGGCGTTATTGTCTCGCCCTGGCACCGCTACGACTGGTTTTTTGGCGC GCTCCCCCACGTCTGCACAGGTGCAGAGTTGACGGGATCATGGTCGTCGT GAAGGCTTACATAAAGCGGGACAAGCGCGAGGACCTGGCTCCTGTTGAGG CTTGCCTGTCGAACATGGCTAAAGCGCTGGACACGCGCAGCTGCCCCAAT GTGTTGCCTTACCAGCGGTGGCTCCAATCCGATGTGAGTGTGCGATTCGG CGCTGGGACCATGCTCAACATGAACCCCAAGCACCGCATTTTACAGCAAC GCTGGTGGTAGGTGGCCGCTGCGGGAACAGGAAGCCTGCATCGACGAGTA CCCCACCCCGTCACTAAGACCTACAATAGGCGTATAGTGTATCGTTTTTG TTGTCGGCGCGTTAAAGAGCAGTTCTGACCTCCACCCCGTACCTCGCGTT CTGTACTGGTTCAAACGCCAAAGGAACTTTTCCGTGTTCACAACCTAGCC CAGAACGGGCACAGCAATAACATATTATGCTGGAGGAATGGCAACTTTTG AAAACGAAGGAAGGTTGTTATTTGAGGGAATGCAACTTTTGAGAACAAAT GTTGTTTGCACAGAATAACCTACATTTTTACCATTTCCAGTTGACAAAGA GCAGGGCGTACGGGGCACGGGAAAAAACTCCAAACTCCAAAAAGGACACA GAGCGCATCACTCCAACTCGGCAGCTTGTTCACGACTAAAATACCGTAGG TTGTTGTTGTTGCTGTTGTTTTCATGAAAAAAGGAGAACGTCCCGATCTC TTCTCAGTACAACCTTGTAGCATCTGTACTTGATCAAGCTGTCGCGCACG CCTTCCGTGGCTGTGCCTCTGCAAAATGAAGATAACTCACCAAGCAGGCA CGGTGGGGCACGCTCGGCCTCGAGAGAATAGCAGTAGTATCTCCGCTTCC CTCCACGATGCCGGGGGTCTGTCTCATCACCGCGGGACCCCGATTGATGT TTTTTTTTTCCAGCTTGATCCACGAACCGTTTTACATCTCTCGAGAACAC GACGATGTGCACACGCCGCAACAACAAGGCGTGTAACTTCCCCTCGCACT GAGATCGTTTGGAACCAAAAACGGCTCTCAACACACGCAGGTCCGCGCGA GCCCGCACAAGAACGCGGGCACCCCGGCGTACCTGCTGCGGCAGCACCTC CTGGGGACTCTGAGCGATCGGCTTTCCACCCGGCCTTTCCTCACCGACAC CGAGAAGCGCTGGCTCGTGTACCTCCTGCTGAGGGCCGCGGCGCAGTGCC ACGGGAAGGGGGTACGTCACGGCGACATCAAGAGCGAGAACGTGCTGGTG ACGAGCGGGAACTGGGTGCTGCTGACGGACTTCGCCCCGTTCAAGCCCAC GTTTTTGCCGGTGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGATGCCGG GACGGGTCTGTCGTCTCGCCTCGGCGCCGGCAACACCATCTTTGCTGGAG TACCGTATACATAGTTCCGTTGCTACAAGTGTTGCTGAGAGTGTGTGCGG CAGCATGGTGGTGGTGAAAGGGCCGGTGTGGTTGCTCTTCGTTGAAAGTT TTAAAGCGCACGATTGGGGTAAGTAAGGTACTACCACTACCTGGTAGGAT GCACCCCGTTCCCTTGTTTCACGTGGTGTTGTTACTTTTACAGGCGGGGG CGGTGTACCCCCGAGATGTTTGACTCTGCCTGCAACGGTGAAGTGGGATT CGTGCGTACTCTGTCTCGAACGCGATGCCTGACCAGGCACAGCAGCACAG CGGTCTCCAGGCTTACACACCAAGTATATGCACCCCCCCCCTCCCCACGC GTCCCCCGTCCCCCACCTACTCAGGACGACCACCCGGCGGACGCGAACTA CTACTTCAGCTCAGGAGAGCAGGGCCGCTGCTACCTTGCTCCCGAGCGCT TCTACAGCGTTCCCCAGGCTTCTGACGCGTCGACGACGGGGGACGGGGCA GCGAGCGGGGGAACGGCGGGGGCAGCGGGCGTGGCCGGAACAGCGCAGCA AGCGGGAGGTGTCGTCGCGGGGGCTGCGCAGGCCAAAGGAGGAGGGGGAG GAGGAGGAGGGGGTCTAGATGGCTTGGTGAGTGTTGGCGAGCCGTACGCG TGGAGTCGATGCCCTGTGGCTCGTAATTTTTCTGACCGTAATATTTGTTT TTGTTACTCTTCCGCCGGGTGTGCGCTGTCCTCGCCCGAAGTTGTTGGTT GGCCGTCGTGTTCCTGGTTTCGAAGTTGTCTGGCCACGCTCGGCTTCCCC CCACGAGGTGGCCGGGTTCTCTATCCCCTCTGAAACTTACCTCTCGTTGT CAACTCTTAACCTTTTTTTATTTGTCAAGGGCCAATATATATTGATGGGT AACCTTTTTGTTTTGACCGCTGCTCCAGGAAGCAAGCGTGATCCAACCCG GCCCCGATGGGCTCAACACCGACAGCACCAAATCCGCCAGTGCTGGAGGA GGAGGAGGCAAGAGCAGTCCGAGGGCCAGTGGGGGCTCGGAGTCACAGCA GCAGCAGCAGCAGCAGAGGTCGAAGAAGGGTGCGAGCGGCCGGGAGGACG GAAGCAGAAGGGGCCCCGCGGGCGCGGCGGGGGGGGGAGGGGCCCCGGGG GAGGGGCTCCTGGAGTCCATGGACGTGTTTAGCCTTGGCTGCGTCATCGC CGAGGTG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10848:119..3725-

>mRNA_Ecto-sp9_F_contig10848.733.1 ID=mRNA_Ecto-sp9_F_contig10848.733.1|Name=mRNA_Ecto-sp9_F_contig10848.733.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2208bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10848:119..3725- (Ectocarpus species9 EcSCA_722f female)
ATGGGCAATGCCTCATCCCACGCGTACTATGGCGCGGCTCCACCGCCCGC
AGCCGACGCGCGCGTGATACTGCAGCACGATCTTCCCAAGGTGATTTACG
TCAAGCGGCTGGCCAACGGCAAGTTCATCAAGAGCTACCAATGGGCAATG
CCTCATCCCACGCGTACTATGGCGCGGCTCCACCGCCCGCAGCCGACGCG
CGCGTGATACTGCAGCACGATCTTCCCAAGGTGATTTACGTCAAGCGGCT
GGCCAACGGCAAGTTCATCAAGAGCTACCAGTGCAGAGTTGACGGGATCA
TGGTCGTCGTGAAGGCTTACATAAAGCGGGACAAGCGCGAGGACCTGGCT
CCTGTTGAGGCTTGCCTGTCGAACATGGCTAAAGCGCTGGACACGCGCAG
CTGCCCCAATGTGTTGCCTTACCAGCGGTGGCTCCAATCCGATGTGCAGA
GTTGACGGGATCATGGTCGTCGTGAAGGCTTACATAAAGCGGGACAAGCG
CGAGGACCTGGCTCCTGTTGAGGCTTGCCTGTCGAACATGGCTAAAGCGC
TGGACACGCGCAGCTGCCCCAATGTGTTGCCTTACCAGCGGTGGCTCCAA
TCCGATGTCCGCGCGAGCCCGCACAAGAACGCGGGCACCCCGGCGTACCT
GCTGCGGCAGCACCTCCTGGGGACTCTGAGCGATCGGCTTTCCACCCGGC
CTTTCCTCACCGACACCGAGAAGCGCTGGCTCGTGTACCTCCTGCTGAGG
GCCGCGGCGCAGTGCCACGGGAAGGGGGTACGTCACGGCGACATCAAGAG
CGAGAACGTGCTGGTGACGAGCGGGAACTGGGTGCTGCTGACGGACTTCG
CCCCGTTCAAGCCCACGTTTTTGCCGGTCCGCGCGAGCCCGCACAAGAAC
GCGGGCACCCCGGCGTACCTGCTGCGGCAGCACCTCCTGGGGACTCTGAG
CGATCGGCTTTCCACCCGGCCTTTCCTCACCGACACCGAGAAGCGCTGGC
TCGTGTACCTCCTGCTGAGGGCCGCGGCGCAGTGCCACGGGAAGGGGGTA
CGTCACGGCGACATCAAGAGCGAGAACGTGCTGGTGACGAGCGGGAACTG
GGTGCTGCTGACGGACTTCGCCCCGTTCAAGCCCACGTTTTTGCCGGACG
ACCACCCGGCGGACGCGAACTACTACTTCAGCTCAGGAGAGCAGGGCCGC
TGCTACCTTGCTCCCGAGCGCTTCTACAGCGTTCCCCAGGCTTCTGACGC
GTCGACGACGGGGGACGGGGCAGCGAGCGGGGGAACGGCGGGGGCAGCGG
GCGTGGCCGGAACAGCGCAGCAAGCGGGAGGTGTCGTCGCGGGGGCTGCG
CAGGCCAAAGGAGGAGGGGGAGGAGGAGGAGGGGGTCTAGATGGCTTGGA
CGACCACCCGGCGGACGCGAACTACTACTTCAGCTCAGGAGAGCAGGGCC
GCTGCTACCTTGCTCCCGAGCGCTTCTACAGCGTTCCCCAGGCTTCTGAC
GCGTCGACGACGGGGGACGGGGCAGCGAGCGGGGGAACGGCGGGGGCAGC
GGGCGTGGCCGGAACAGCGCAGCAAGCGGGAGGTGTCGTCGCGGGGGCTG
CGCAGGCCAAAGGAGGAGGGGGAGGAGGAGGAGGGGGTCTAGATGGCTTG
GAAGCAAGCGTGATCCAACCCGGCCCCGATGGGCTCAACACCGACAGCAC
CAAATCCGCCAGTGCTGGAGGAGGAGGAGGCAAGAGCAGTCCGAGGGCCA
GTGGGGGCTCGGAGTCACAGCAGCAGCAGCAGCAGCAGAGGTCGAAGAAG
GGTGCGAGCGGCCGGGAGGACGGAAGCAGAAGGGGCCCCGCGGGCGCGGC
GGGGGGGGGAGGGGCCCCGGGGGAGGGGCTCCTGGAGTCCATGGACGTGT
TTAGCCTTGGCTGCGTCATCGCCGAGGTGGAAGCAAGCGTGATCCAACCC
GGCCCCGATGGGCTCAACACCGACAGCACCAAATCCGCCAGTGCTGGAGG
AGGAGGAGGCAAGAGCAGTCCGAGGGCCAGTGGGGGCTCGGAGTCACAGC
AGCAGCAGCAGCAGCAGAGGTCGAAGAAGGGTGCGAGCGGCCGGGAGGAC
GGAAGCAGAAGGGGCCCCGCGGGCGCGGCGGGGGGGGGAGGGGCCCCGGG
GGAGGGGCTCCTGGAGTCCATGGACGTGTTTAGCCTTGGCTGCGTCATCG
CCGAGGTG
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