mRNA_Ecto-sp9_F_contig1082.718.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1082.718.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI) HSP 1 Score: 855 bits (2209), Expect = 6.950e-300 Identity = 442/486 (90.95%), Postives = 459/486 (94.44%), Query Frame = 1
Query: 1 RNPEQRTRGTTRADLEGKWQAKVAELNGAGTPVAAPEAAMSGAILIRKLEGGLVEYGNYVFLDVEWFATVLDPLFSHHRDSFGGIDLGGIRVTNLASLRRLEIEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEHSIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIMGNGAEKGLFSLSLEYSEEDKILALEAFGGREEVHAWAALSKVLSVVIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLLGAALQVVELSDEKFLGEPLQKQFAENAERVARQGCA-WPGMNYEVEVSGPASSGVSPGIQAPAQIRSSNXXXXXXXXXXXXXXXGSPPNQVSGTPWYQDVKTLIGAASVACLTIFGIFAAKEDDDPRLWGGFLGFGMLFIGAEFVLIAREYKLLCCKPRVESASAV 1455
R EQRTRG TRADLE KW AKVAELNGAGTPVAAPEAAM GAILIRK EGGLVEYGNYVFLDVEWFATVLDPLFSH RDS+G IDLGGIRVTNLASLRRL+ EHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDT PPE+ IKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCH+GYP+PFWRYGALI+GNGAEKGLFSLS+EYSEEDKILALE FGG EEVHAWAALSKVLSV+IKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLL AALQVVE SDEKFL EPL++QFAENAE+VARQGCA WPGMNYEVEVSGPASSG+SPGIQAPAQIRSSNXXXXXXXXXXXXXXX QVSGTPWYQDVKTL+GAASVACLT+FG+FAAKEDDDPRLWG FLG GML IGAEFVLIARE+KLLCCKPRVE+ASAV
Sbjct: 776 RKAEQRTRGITRADLEEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYGIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHMGYPFPFWRYGALIVGNGAEKGLFSLSVEYSEEDKILALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLLAAALQVVEFSDEKFLDEPLREQFAENAEKVARQGCALWPGMNYEVEVSGPASSGISPGIQAPAQIRSSNXXXXXXXXXXXXXXXXXXXXQVSGTPWYQDVKTLVGAASVACLTVFGVFAAKEDDDPRLWGVFLGVGMLLIGAEFVLIAREHKLLCCKPRVEAASAV 1261
BLAST of mRNA_Ecto-sp9_F_contig1082.718.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI) HSP 1 Score: 753 bits (1943), Expect = 5.530e-261 Identity = 394/486 (81.07%), Postives = 427/486 (87.86%), Query Frame = 1
Query: 1 RNPEQRTRGTTRADLEGKWQAKVAELNGAGTPVAAPEAAMSGAILIRKLEGGLVEYGNYVFLDVEWFATVLDPLFSHHRDSFGGIDLGGIRVTNLASLRRLEIEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEHSIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIMGNGAEKGLFSLSLEYSEEDKILALEAFGGREEVHAWAALSKVLSVVIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLLGAALQVVELSDEKFLGEPLQKQFAENAERVARQGCA-WPGMNYEVEVSGPASSGVSPGIQAPAQIRSSNXXXXXXXXXXXXXXXGSPPNQVSGTPWYQDVKTLIGAASVACLTIFGIFAAKEDDDPRLWGGFLGFGMLFIGAEFVLIAREYKLLCCKPRVESASAV 1455
R EQRTRG TRADLE KW AKVAELNGAGTPVAAPEAAM GAILIRK EGGLVEYGNYVFLDVEWFATVLDPLFSH RDS+G IDLGGIRVTNLASLRRL+ EHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDT PPE+SI+ E+ ++A + DL L+VACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALI+GNGAEKGLFSLSL+YSE D +L +E GG EEVHAWAALSKVLSV+IKMLSEFPGLPCE +FFCPQHKTKGMPIRTTD PGS LVE+ YFC LCQD AG +LL AALQVVE SDE+F EPL+++FAENAE+VAR+GCA G ++E VSG SS +SP +APA RSS XXXXXXXXXXXXXXX SP QVSGTPWYQDVKT +GAASVACLT+FG+FAAKEDDDPRLWG FLG GML IG EF LIARE+KLLCCKPRV++ASAV
Sbjct: 683 RKAEQRTRGITRADLEEKWHAKVAELNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYSIRREEANQARKYDLTLSVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEKGLFSLSLDYSEHDNMLKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPIRTTDAPPGSGLVEKGYFCPLCQDPTAGNNLLAAALQVVEFSDEEFFDEPLRQKFAENAEKVARKGCASQQGSHFEGGVSGSTSSDISPSSRAPAPTRSSXXXXXXXXXXXXXXXXXSPTGQVSGTPWYQDVKTWVGAASVACLTVFGVFAAKEDDDPRLWGVFLGVGMLLIGGEFFLIAREHKLLCCKPRVDAASAV 1168
BLAST of mRNA_Ecto-sp9_F_contig1082.718.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW8_9PHAE) HSP 1 Score: 704 bits (1816), Expect = 1.440e-251 Identity = 357/488 (73.16%), Postives = 399/488 (81.76%), Query Frame = 1
Query: 1 RNPEQRTRGTTRADLEGKWQAKVAELNGAGTPVAAPEAAMSGAILIRKLEGGLVEYGNYVFLDVEWFATVLDPLFSHHRDSFGGIDLGGIRVTNLASLRRLEIEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEHSIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIMGNGAEKGLFSLSLEYSEEDKILALEAFGGREEVHAWAALSKVLSVVIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLLGAALQVVELSDEKFLGEPLQKQFAENAERVARQGCAWP-GMNYEVEVSGPASSGVSPGIQAPAQIRSSNXXXXXXXXXXXXXXXGSPPNQ--VSGTPWYQDVKTLIGAASVACLTIFGIFAAKEDDDPRLWGGFLGFGMLFIGAEFVLIAREYKLLCCKPRVESASAV 1455
R ++RTRG TRADLE KWQAKVAEL+GAGTPVAAPEAA+SGAILIRK EGGLVEYGNYVFLDVEWFATVLDPLFSH RDS+G IDLGGIRVTN+ASLRRL+ EHVFEPQLAEELW+ ELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTK PPE+SI+ E+ ++A + DL LTVAC FSLG+PPGFVERLLARCC LG PYPFWRYGAL++GNGAE+GLFSLSL+YSE D +L +E GG EVHAWAALSKVLSV+IKMLSEFPGLPCE +FFCPQHKTKGMP+RTTD GS LVEESYFC LCQDR+AGIDLL AALQVV SDE+F EPL+++FAENAERV RQGCA G + EV G AP + + G P VSGTPWYQDVKT +GAASVACLT+FG+FA+KED+DPRLWG FLG GM +G EF+LIARE+KLLCCKPR ++ASAV
Sbjct: 16 RKAKRRTRGITRADLEEKWQAKVAELSGAGTPVAAPEAAISGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRRDSYGDIDLGGIRVTNIASLRRLDNEHVFEPQLAEELWSRELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKSPPEYSIRREEANQARKYDLTLTVACWFSLGVPPGFVERLLARCCRLGVPYPFWRYGALVVGNGAEEGLFSLSLDYSEHDNMLKVEVLGGGGEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTKGMPVRTTDAPAGSGLVEESYFCPLCQDRKAGIDLLAAALQVVGFSDEEFFDEPLRREFAENAERVTRQGCASQHGSDSEV------------GYLAPHAVGTMQAMNRSTQTGLPRSYEGLRPRHDVVSGTPWYQDVKTFVGAASVACLTVFGVFASKEDEDPRLWGVFLGVGMTLLGVEFLLIAREHKLLCCKPREDAASAV 491
BLAST of mRNA_Ecto-sp9_F_contig1082.718.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI) HSP 1 Score: 632 bits (1629), Expect = 1.050e-214 Identity = 345/482 (71.58%), Postives = 379/482 (78.63%), Query Frame = 1
Query: 10 EQRTRGTTRADLEGKWQAKVAELNGAGTPVAAPEAAMSGAILIRKLEGGLVEYGNYVFLDVEWFATVLDPLFSHHRDSFGGIDLGGIRVTNLASLRRLEIEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEHSIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIMGNGAEKGLFSLSLEYSEEDKILALEAFGGREEVHAWAALSKVLSVVIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLLGAALQVVELSDEKFLGEPLQKQFAENAERVARQGCA-WPGMNYEVEVSGPASSGVSPGIQAPAQIRSSNXXXXXXXXXXXXXXXGSPPNQVSGTPWYQDVKTLIGAASVACLTIFGIFAAKEDDDPRLWGGFLGFGMLFIGAEFVLIAREYKLLCCKPRVESASA 1452
EQ+TRG TRA LE KWQAKVAE+N AGT VAAP+AAM+GAILIRK EGGLVEYG+YVFLDVEWFATVLDPLF H RDS+G IDLGGIRV ++ SL RL+ EHV EPQLAE+LW P LAPHLLLALKSAGLTFPL ND NGGLVILLRMDTKPPP++ IKL++ +A++ DLRL V CSF LGLPPGFVERLLARCCHLG PYPFWRYGALI+G GAE+ +FSLSLEYSE KIL +E GG EV AWAALSKVLSV IKML EFPGLPC FFCP HKT GM IRT D RPGSCLV ES FC+LCQDR A + L+ ALQVVE SDEKF E L++QFA +VA QGCA WPG N EV SGPA P I S XXXXXXXXXXXXXXX S TPWYQDVKT +GAAS+ CL +FG+F +EDDDPRLWG FLG GML +G EF LIAREYKLLC PR E+ASA
Sbjct: 615 EQQTRGITRAILEEKWQAKVAEMNRAGTSVAAPDAAMAGAILIRKWEGGLVEYGSYVFLDVEWFATVLDPLFCHKRDSYGKIDLGGIRVMDVDSLDRLDEEHVLEPQLAEDLWGPVLAPHLLLALKSAGLTFPLSNDSNGGLVILLRMDTKPPPDYGIKLKEKDQANKFDLRLVVECSFRLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEERMFSLSLEYSEARKILTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLHKTNGMKIRTKDARPGSCLVGESDFCKLCQDRSAAVGLVAVALQVVEFSDEKFFDEQLREQFAG---KVALQGCASWPGSNSEV--SGPA----------PVHISPSXXXXXXXXXXXXXXXXXXXXXXGSRTPWYQDVKTFVGAASLVCLAVFGVFHDEEDDDPRLWGVFLGLGMLLVGVEFGLIAREYKLLCFTPRAEAASA 1081
BLAST of mRNA_Ecto-sp9_F_contig1082.718.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE) HSP 1 Score: 529 bits (1363), Expect = 5.760e-179 Identity = 294/489 (60.12%), Postives = 331/489 (67.69%), Query Frame = 1
Query: 10 EQRTRGTTRADLEGKWQAKVAELNGAGTPVAAPEAAMSGAILIRKLEGGLVEYGNYVFLDVEWFATVLDPLFSHHRDSFGGIDLGGIRVTNLASLRRLEIEHVFEPQLAEELWTPELAPHLLLALKSAGLTFP-LPNDPNGGLVILLRMDTKPPPEHSIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIMGNGAEKGLFSLSLEYSEEDKILALEAFGGREEVHAWAALSKVLSVVIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFC------QLCQDREAGIDLLGAALQVVELSDEKFLGEPLQKQFAENAERVARQGCA-WPGMNYEVEVSGPASSGVSPGIQAPAQIRSSNXXXXXXXXXXXXXXXGSPPNQVSGTPWYQDVKTLIGAASVACLTIFGIFAAKEDDDPRLWGGFLGFGMLFIGAEFVLIAREYKLLCCKPRVESASA 1452
EQ RG TRA LE KWQ KVAE+N GT V+AP+AAM+GAILIRK EGGLVEY +YVFLDVEWFATVLDPLF H RDS+G I LGG+RVT++ L RL+ +HV EPQLAEE W FP LPND NGGLVILLRMDTKP P++ IKL++ +A++ DLRL V CSFSLGLPPGFVERLLARCCHLG PYPFWRYGALI+G GAE +FSLSLEYSEE KIL +E GGR EV AWAALSKVLSV IKMLSEFPGLPC FFCP HKTK M IRT D +C + +F L +DR AGIDLL ALQVVE SDE+F E L++QFAE ++A +GCA W G +S G S TPWYQDVKT +GAASVACLT+FG+F +EDDDP LWG FLG GML G EF LIAREYKLLC PR E+ASA
Sbjct: 325 EQHIRGVTRAILEDKWQTKVAEMNRVGTSVSAPDAAMAGAILIRKWEGGLVEYSSYVFLDVEWFATVLDPLFCHKRDSYGKIYLGGMRVTDVDGLDRLDEDHVLEPQLAEEDWR-----------------FPSLPNDSNGGLVILLRMDTKPSPDYGIKLKEADQANKFDLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEVRMFSLSLEYSEERKILTVEVSGGRTEVFAWAALSKVLSVTIKMLSEFPGLPCGTTFFCPLHKTKRMKIRTKDVSARACRSKYVFFVLRSQKFYLNKDRAAGIDLLAVALQVVEFSDEEFFDESLREQFAE---KMALRGCASWLGS-------------ISEG---------------------------------SRTPWYQDVKTFVGAASVACLTVFGVFHDEEDDDPLLWGVFLGLGMLLAGVEFGLIAREYKLLCFTPRAEAASA 747
BLAST of mRNA_Ecto-sp9_F_contig1082.718.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE) HSP 1 Score: 507 bits (1305), Expect = 3.190e-169 Identity = 280/517 (54.16%), Postives = 338/517 (65.38%), Query Frame = 1
Query: 58 QAKVAELNGAGTPVAAPEAAMSGAILIRKLEGGLVEYGNYVFLDVEWFATVLDPLFSHHRDSFGGIDLGGIRVTNLASLRRLEIEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEHSIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIMGNGAEKGLFSLSLEYSEEDKILALEAFGGREEVHAWAALSKVLSVVIKMLSEFPGLPCELMFFCPQHKTKGMPI-RTTDGRPGSCLVEESYFCQLCQDREAGIDLLGAALQVVELSDEKFLGEPLQKQFAENAERVARQGCA-WPGMNYEVEVSGPASSGVSP-------------------GIQAPAQIRS----------------------SNXXXXXXXXXXXXXXXGSPPNQVSGTP--------WYQDVKTLIGAASVACLTIFGIFAAKEDDDPRLWGGFLGFGMLFIGAEFVLIAREYKLLCCK-PRVESASA 1452
+++V L AGT AA EAA+SGAILIRK EGGLVEYGNY+FLDV WFA VLDPLFSH +DS G I LGG VTN SL+RL+ H+FEP+LAE+LW ELAPHLL AL SAGLTFP+PNDP GLV++LRMDT+PPP++ +E+ DLRL V CSF LGLPPGFVERLLARCCHLG+P+PFWRYGAL++G GAE+G FSL+LEYSEEDK L ++ G EVHAWA LSKVLSV IKMLSEFPGLPC+L F CP+H+ K M + + + RPGS LVEE FC +C DR AG DLLGAAL VVE SD +F L+K+FA+NA+RVARQG A WP EV S +S P G P I + S+ +P +Q S TP W +D++ +GAA C+T+FG+F AKEDDDPRLWG FLG G++ EFVL+A+ ++ C K PRVE+ASA
Sbjct: 310 RSRVDALGTAGTTAAASEAALSGAILIRKWEGGLVEYGNYIFLDVGWFADVLDPLFSHKKDSNGIIYLGGKTVTNDDSLKRLDANHIFEPRLAEDLWGAELAPHLLSALNSAGLTFPIPNDPFEGLVVVLRMDTEPPPDYRTIVEEEQARKYYDLRLVVQCSFRLGLPPGFVERLLARCCHLGFPHPFWRYGALVVGAGAEEGKFSLTLEYSEEDKTLKVQVNGRCSEVHAWATLSKVLSVTIKMLSEFPGLPCQLEFLCPRHEDKSMRVLKANNARPGSRLVEEGNFCPVCPDRTAGNDLLGAALHVVEYSDTEFSDAQLRKRFADNAKRVARQGRALWPASVTEVGSSTTIASMYKPRAAQKCRIPMNTGPLSKPCGSTQPVCIETLGCSGLCELFFDRRRTQLFVQVSDPAPPQISPISPASLQTNPSSQDSRTPRYQDRMRAWVKDLRVQVGAAGALCVTVFGVFYAKEDDDPRLWGLFLGIGLVLAVVEFVLVAKLHERWCFKSPRVEAASA 826
BLAST of mRNA_Ecto-sp9_F_contig1082.718.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KED3_9PHAE) HSP 1 Score: 454 bits (1168), Expect = 1.530e-154 Identity = 242/425 (56.94%), Postives = 283/425 (66.59%), Query Frame = 1
Query: 130 ILIRKLEGGLVEYGNYVFLDVEWFATVLDPLFSHHRDSFGGIDLGGIRVT-NLASLRRLEIEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEHSIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIMGNGAEKGLFSLSLEYSEEDKILALEAFGGREEVHAWAALSKVLSVVIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLLGAALQVVELSDEKFLGEPLQKQFAENAERVARQGCA-WPGMNYEVEVSGPASSGVSPGIQAPAQIRSSNXXXXXXXXXXXXXXXGSPPNQVSGTPWYQDVKTLIGAASVACLTIFGIFAAKEDDDPRLWGGFLGFGMLFIGAEFVLI 1398
I++ K EGGLVEYG+YVFLDV+WFA VLDPLFSH R+ +G IDLGG VT N+ SLRRL+ +H+FEP+LAEELW P+LA HLL ALKSAGLTFP+PNDPN GLVIL+RM KPPP + KL+Q A + DL+L C F LGLPPG +ER+LARCC LG+PYPFWRYGALI G G + G FS L YS+E+K+L + GGRE+V AWA LSKVLSV+IKMLSE+ GLPCE FCP H+ K MPI T + +PGS LVEES FC LC DR AGI L AALQVVE SD FL E L K+FAENA +VA + C W NY+ N + WY+DVK I AS ACLT+F F AK+DDDPRLWG FL GML I + VLI
Sbjct: 2 IVVEKWEGGLVEYGSYVFLDVQWFAEVLDPLFSHKRNLYGSIDLGGRSVTKNVRSLRRLDNDHIFEPRLAEELWGPDLARHLLAALKSAGLTFPMPNDPNEGLVILVRMKDKPPPGYDTKLKQAIAARKYDLKLIFHCKFRLGLPPGLIERILARCCQLGHPYPFWRYGALISGEGGQ-GSFSADLRYSDENKLLEIVVHGGREKVDAWATLSKVLSVLIKMLSEYGGLPCEPQLFCPLHEEKSMPI-TRNTKPGSRLVEESDFCPLCLDRRAGISFLAAALQVVEFSDTCFLDEQLSKEFAENATKVAHKICEPWLSSNYQ--------------------------------------------NSETRYVWYEDVKAWILLASEACLTVFTAFVAKDDDDPRLWGSFLAVGMLLILIDAVLI 380
BLAST of mRNA_Ecto-sp9_F_contig1082.718.1 vs.
Match: G (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZA7_9PHAE) HSP 1 Score: 419 bits (1076), Expect = 2.870e-137 Identity = 240/367 (65.40%), Postives = 257/367 (70.03%), Query Frame = 1
Query: 1 RNPEQRTRGTTRADLEGKWQAKVAELNGAGTPVAAPEAAMSGAILIRKLEGGLVEYGNYVFLDVEWFATVLDPLFSHHRDSFGGIDLGGIRVTNLASLR--RLEIEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEHSIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIMGNGAEKGLFSLSLEYSEEDKILALEAFGGREEVHAWAALSKVLSVVIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLLGAALQVVELSDEKFLGEPLQKQFAENAERVARQGCA-WPGMNYEV 1092
R EQRTRG TRADLE KWQAKVAELN AGTPVAAPEAAMSGAILI SH RD G IDLGGIRV N A R RL+ +HVFEP+LAE LW+PELA HLLLALKSAGLTFPLP D NGGLVI LRMDT PE+ IKLEQVHKASE DL+LTV CSFSLGLP GFVER LA+CCH+GYPYPFWRYGALI+ +G DKILALE FGG EEVHAWAALSKVLSVVIKML T +P RPGSCLVEESY CQLCQDR AGIDLL AALQV+E SDEKF EPL++QFAENA++VAR+ CA WPGMNYEV
Sbjct: 335 RKAEQRTRGITRADLEQKWQAKVAELNSAGTPVAAPEAAMSGAILI-----------------------------SHKRDLDGHIDLGGIRVPNDARARLDRLDRDHVFEPKLAEGLWSPELASHLLLALKSAGLTFPLPQDSNGGLVINLRMDTTRLPEYGIKLEQVHKASEPDLKLTVKCSFSLGLPLGFVERFLAQCCHVGYPYPFWRYGALIVDDG---------------DKILALEVFGGCEEVHAWAALSKVLSVVIKML------------------TSSLP------RPGSCLVEESYICQLCQDRAAGIDLLAAALQVLEFSDEKFFDEPLREQFAENAKKVARKDCALWPGMNYEV 633
BLAST of mRNA_Ecto-sp9_F_contig1082.718.1 vs.
Match: LRR-GTPase (of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM75_ECTSI) HSP 1 Score: 249 bits (635), Expect = 3.570e-69 Identity = 172/471 (36.52%), Postives = 233/471 (49.47%), Query Frame = 1
Query: 22 RGTTRADLEGKWQAKVAELNGAGTPVAAPEAAMSGAILIRKLEGGLVEYGNYVFLDVEWFATVLDPLFSHHRDSFGGIDLGGIRVTNLASLRRLEIEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTKPPPEHSIKLEQVHKASEADLRLTVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIMGNGAEKGLFSLSLEYSEEDKIL----ALEAFGGREEVHAWAALSKVLSVVIKMLSEFPGLPCELMFFCPQHK--TKGMPIRTTDGRPGSCLVEESYFCQLC--QDREAGIDLLGAALQVVELSDEKFLGEPLQKQFAENAERVARQGCAWPGMNYEVEVSGPASSGVSPGIQAPAQIRSSNXXXXXXXXXXXXXXXGSPPNQVSGTPWYQDVKTLIGAASVACLTIFGIFAAKEDDDPRLWGGFLGFGMLFIGAEFVLIAREY 1410
RG R +L+G W KV EL G + A E A+ GAI I EG LV YG++V +DV+W ATVL PL SH S G ++LGGI V + RL + + EP+LAEELW P+ HLL AL SAGLTFP PND GGLV+LLR+D P + L+ + + ++ +C+ G PPGF+ERLL+ CC LG FWRYG LI FS+ LEY+E+D L +++AFG W ALS LSV+ KMLSEFPG+ E CP H ++ +PI RP C + E C+ C + + L L VV ++D F ++F ++A +G + P V VS P S G+ PA P Q+ + D++ + CL F A+ P +W FL GM F A + R++
Sbjct: 612 RGVERTELDGLWHDKVDELKRGGHEMEATEHALDGAISIMAYEGSLVVYGSFVIVDVQWLATVLKPLCSHKDMSMGEVNLGGITVRPGPRVERLVKDGILEPKLAEELW-PDTWEHLLRALSSAGLTFPRPNDKEGGLVVLLRLDKDRPDDVGDILDDFRASHDG--QIVASCTLLQGAPPGFIERLLSTCCRLGSCNHFWRYGVLIQSRS-----FSVILEYAEDDDTLVGKFSVDAFGDSRTAGPWLALSGCLSVLSKMLSEFPGMDVEATLECPYHSGGSRLIPIDLYQRRPWQCFIREVDGCRRCIHEGEQNARHLFSRGLVVVPVTDSGFDTAGFTRKF-DDATTEYNEGASAP----RVTVSTPPRPQESQGL--PASRXXXXIPVGPSAAPRRMEPQDRVPAQIEAL--FGDLEKSFTIIAGGCLAAFAGLASVYA--PEVWAPFLVLGMCFSLAAAASVLRKW 1063
BLAST of mRNA_Ecto-sp9_F_contig1082.718.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE2_9PHAE) HSP 1 Score: 219 bits (558), Expect = 1.050e-65 Identity = 130/253 (51.38%), Postives = 138/253 (54.55%), Query Frame = 1
Query: 700 DKILALEAFGGREEVHAWAALSKVLSVVIKMLSEFPGLPCELMFFCPQHKTKGMPIRTTDGRPGSCLVEESYFCQLCQDREAGIDLLGAALQVVELSDEKFLGEPLQKQFAENAERVARQGCA-WPGMNYEVEVSGPASSGVSPGIQAPAQIRSSNXXXXXXXXXXXXXXXGSPPNQVSGTPWYQDVKTLIGAASVACLTIFGIFAAKEDDDPRLWGGFLGFGMLFIGAEFVLIAREYKLLCCKPRVESASAV 1455
DKILA E FGG EEVH WAALSK LSV IKMLSEFPGL CE VVE SDEKFL PLQ+QFAENAE+V RQGCA WPGMNYEV P VSGTPWYQDVKT +GAASVACLT+FG+F A EDDDPRLWG LGFG+LFIGAEFV+IARE K LC KPRVE+ASAV
Sbjct: 4 DKILATEVFGGCEEVHPWAALSKFLSVTIKMLSEFPGLQCE---------------------------------------------------VVEFSDEKFLDGPLQEQFAENAEKVTRQGCALWPGMNYEVAFL---------------------------------------PQAVSGTPWYQDVKTWVGAASVACLTVFGVFVANEDDDPRLWGVILGFGVLFIGAEFVVIARENKRLCRKPRVEAASAV 166 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1082.718.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1082.718.1 >prot_Ecto-sp9_F_contig1082.718.1 ID=prot_Ecto-sp9_F_contig1082.718.1|Name=mRNA_Ecto-sp9_F_contig1082.718.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=486bp RNPEQRTRGTTRADLEGKWQAKVAELNGAGTPVAAPEAAMSGAILIRKLEback to top mRNA from alignment at Ecto-sp9_F_contig1082:21955..24663- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1082.718.1 ID=mRNA_Ecto-sp9_F_contig1082.718.1|Name=mRNA_Ecto-sp9_F_contig1082.718.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2709bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1082:21955..24663- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1082:21955..24663- >mRNA_Ecto-sp9_F_contig1082.718.1 ID=mRNA_Ecto-sp9_F_contig1082.718.1|Name=mRNA_Ecto-sp9_F_contig1082.718.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2916bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1082:21955..24663- (Ectocarpus species9 EcSCA_722f female)back to top |