mRNA_Ecto-sp9_F_contig108.695.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig108.695.1
Unique NamemRNA_Ecto-sp9_F_contig108.695.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig108.695.1 vs.
Match: Uncharacterized (protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWL0_9PHYC)

HSP 1 Score: 380 bits (976), Expect = 6.180e-123
Identity = 211/490 (43.06%), Postives = 291/490 (59.39%), Query Frame = 1
Query:    1 THTIMSGGALYVPEDLYDEFLGVYAREIERGNRTLAYSEKRSPDVFRMYFDLDLLDKHEMDDSSMLAIVREVQQTTALFFVGAEDEAMKCVVSRTQTKKLEASTPATDSPRCETFIKNGVHLNFPKLLVNLDMALQIRFSVVNPLEREFGQRAASHNPWSDVIDKAPYFNGLKMTGSVRRVRCNKCDSSKKKRQTRGEKDEERLKIMREIGNIRKKLYKRHDD-SFDYTNVMTFEGDEYKNVDLSNLHTKYYALSS--ICFRCNNKGWFLEQRYYSPSHILGAGGVLCCDDLQYLQSNYHEQMRWTSIRARTHDQAMPSYSVPAGHIRPPQDTASTCLRAFGSSGLQWVSPGLYREMINSDVHAEDAKGLSRWKGVTVTDKAAMDAITRCIRGMHDKYKNIIIKQAMEIKTGKKTPDN----------------KRTSNKQTAATTSNNDNVNMRLYTTVVVRVSGEGSKYCQNKGDEHTSNSVYFCISK 1413
            THTIMSGG LYV E+ YDEFLGVYAREI+ GNRTL +SE +S  VFRMYFD+D++D  E+     +++ + V +T   F++  + +  KCVV  T+ K      P +D    +TF KNG HL FP L V L+MALQ+RF+ V  LE  FG+R+   NPW DVIDKAPYFNGLKM GSV+ + C++C   KK  +    K  E   I+R+I NIR+K Y R DD  FDY+NVM+ E DE+KN DL+ L + Y   +   IC  C +KGW LE R+Y P+ +L   G L   D++YL  N HE MRWTSIR+R  D+    Y+VP G+  P  +  +  L+  G+  L+  SPG+YRE +N+++   DA G+  WKG  +T    ++ I   IR     Y++++++QA E++  K    +                K   N   A      +   + +   + VRV+G GS YC NKG EHTSNS++F IS+
Sbjct:   25 THTIMSGGVLYVAEEYYDEFLGVYAREIDEGNRTLTFSELKSEGVFRMYFDIDMVDSRELSADDFVSLSQCVLETLRKFYIDIDQDLFKCVVCTTKPK------PLSDK---DTF-KNGCHLIFPFLNVTLEMALQLRFAAVRDLETRFGRRSRDANPWCDVIDKAPYFNGLKMCGSVKTLTCSECGGKKKNVR----KKPEVAAILRDIRNIRRKTYPRRDDPGFDYSNVMSIEKDEFKNEDLAELFSAYQDETGTLICPACGDKGWHLEDRFYMPAKVLHGDGSLAEADMEYLADNPHETMRWTSIRSRPSDRMTAGYTVPEGYTAPRTERPTNSLQILGAQ-LKSFSPGIYREAVNAEIFGSDAAGIKTWKGCEITAPKTLNLIAHEIRNYATVYQDLVVRQAFEMRVAKAVATSVVSSGSTRSKRGRAGSKALENMAVANKVPGRERRVLEVVARIFVRVAGTGSLYCMNKGAEHTSNSIFFWISQ 499          
BLAST of mRNA_Ecto-sp9_F_contig108.695.1 vs.
Match: FirrV-1-A46 (n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM41_9PHYC)

HSP 1 Score: 343 bits (879), Expect = 4.340e-108
Identity = 199/509 (39.10%), Postives = 284/509 (55.80%), Query Frame = 1
Query:    1 THTIMSGGALYVPEDLYDEFLGVYAREIERGNRTLAYSEKRSPDVFRMYFDLDLLDKHEMDDSSMLAIVREVQQTTALFFVGAEDEAMKCVVSRTQTKKLEASTPATDSPRCETFIKNGVHLNFPKLLVNLDMALQIRFSVVNPLEREFGQRAASHNPWSDVIDKAPYFNGLKMTGSVRRVRCNKCDSSKKKRQTRGEKDEERLKIMREIGNIRKKLYKRHDD-SFDYTNVMTFEGDEYKNVDLSNLHTKYYALSS--ICFRCNNKGWFLEQ-RYYSPSHILGAGGVLCCDDLQYLQSNYHEQMRWTSIRARTHDQAMPSYSVPAGHI-------------RPPQDTASTCLRAFGSSGLQWVSPGLYREMINSDVHAEDAKGLSRWKGVTVTDKAAMDAITRCIRGMHDKYKNIIIKQAMEIKTGKKTPDN--------KRTSNKQTAATTSNNDNVNM------RLYTTVVVRVSGEGSKYCQNKGDEHTSNSVYFCISKAAMW-KC 1431
            THTIMSGG LYVPE+ YDEFLGVYAREI+ GNR L +SE +S DVFRMYFD+D+L+  E+D S  + + R++ +    ++   E++  KCVV  T+ KK             + +IKNG H+ FP L VNL+ ALQ+RF +V  LE   G R    NPW D+IDKAPY+NGLKM GSV+ + C +C  + +    R E     ++I+R+I N+R+K Y R+D+ +FDY+NV   E DE+K+  L+ L  +Y   +   +C  C N+GW+LE  R+Y P+ +L   G     +L+YL  N HE MRWTSIR R  D+    Y++   ++                ++   TCL   G   L  +SPG+YRE +N  +   DA  +  WKG  +TD   ++AI   +R +H  YK + ++Q   +  GK    N        KR       A  +  + V+M      +    +V RVSG G+ YC NK  EH SN +YF I+   ++ KC
Sbjct:   25 THTIMSGGVLYVPEENYDEFLGVYAREIDSGNRGLTFSELKSGDVFRMYFDIDMLETRELDLSYFVHLCRDMVRAMRQYYTDVEEDTFKCVVCTTKPKKRTQ----------DEYIKNGCHVIFPSLRVNLETALQLRFFIVQALENTRGVRKIGINPWCDIIDKAPYYNGLKMCGSVKTIPCLECKGANRNITHRPEV----VEIVRQIRNVRRKYYPRNDNLAFDYSNVFNIEKDEFKHETLAELFARYQEETGYLMCVACGNRGWYLEHDRFYMPAMVLNGDGSSSEGELEYLHDNPHEAMRWTSIRCRPSDEVTGGYTMSPDNVGQYLRYARYEHRGESVRNNTVTCLNKLGPE-LADMSPGMYREAVNGAIAGNDADVIRTWKGEEITDTDVIEAIQNDVRVIHSNYKQLQVRQVFHLGVGKTVKVNAFGEIARGKRKKVLLMMAGIAEKNKVDMADKQVEQDTMVIVARVSGPGASYCMNKNREHGSNHIYFWITPEGIYQKC 518          
BLAST of mRNA_Ecto-sp9_F_contig108.695.1 vs.
Match: EsV-1-45 (n=2 Tax=root TaxID=1 RepID=D8LP78_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 1.080e-82
Identity = 173/480 (36.04%), Postives = 258/480 (53.75%), Query Frame = 1
Query:    1 THTIMSGGALYVPEDLYDEFLGVYAREIERGNRTLAYSEKRSPDVFRMYFDLDLLDKHEMDDSSMLAIVREVQQTTALFFVGAE-DEAMKCVVSRTQTKKLEASTPATDSPRCETFIKNGVHLNFPKLLVNLDMALQIRFSVVNPLEREFGQRAASHNPWSDVIDKAPYFNGLKMTGSVRRVRCNKCDSSKKKRQTRGEKDEERLKIMREIGNIRKKLYKRHDDSFDYTNVMTFEGDEYKNVDLSNLHTKYYALSSI--CFRCNNKGWFLEQRYYSPSHILGAGGVLCCDDLQYLQSNYHEQMRWTSIRARTHDQAMPSYSVPAGHIRPPQDTASTCLRAFGSSGLQWVSPGLYREMINSDVHAEDAKGLSRWKGVTVTDKAAMDAITRCIRG-MHDKYKNIIIKQAMEI---KTGKKTPDNKRTSN---KQTAATTSNNDNVNMRLYTTVVVRVSGEGSKYCQNKGDEHTSNSVYFCIS 1410
            T T+M+GG + VP++ YDEFL +YA E+   N+TL++SE RS  VF MYFD+D+L    +  +    I   +Q     ++ G + D+  +CVV  T  KK+    P+ D     T  KNG H  FP L +NL  ALQ+R+SVV  LE+  G R  S NPWSDVIDKAPY  GLKM GS +RV+C  C     K+     KD+++  ++ E+  +RKK+Y R    FDYT++     DE+K+    + + KY  L+    C  C N G  +E+R Y P  +L  GG +    L  L+ +Y E M++TSIR +  ++    +++P G  R P +     +R F S  L  +   ++   +N+D++  DA+ +  WKG  V D   +  I   +R  +   Y ++ I++  E    K  +K     +  N   +  A TT  + +V   L    +V V+G GS +C NKG EH SNSVYF I+
Sbjct:   19 TQTVMTGGVVSVPDENYDEFLQLYAEEVRSKNKTLSFSELRSDPVFCMYFDVDMLGTGVLGAAESSRIFSVIQSVIRSYYTGDQNDDRFRCVVCDTSVKKV----PSADGETMLT--KNGYHAIFPNLRINLSQALQLRYSVVYELEKTLGPRTGSLNPWSDVIDKAPYTGGLKMCGSFKRVKCTDC-----KKTDPTFKDKKKA-LLSEMAKLRKKIYPRQ-PGFDYTDLSDIHSDEFKDAVFGDKYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQEGEKETSGFTIPKGVPRAPTEENGANMRTFSSKSLTHLGSDMHAFTVNNDIYLSDAQTMRLWKGPRVEDARRLSVIETFLRNNVCSAYSSVQIRKVSESTIKKVAQKPNGGSKMMNALIRAHAGTTPPSPDV--ALSNRYLVNVAGVGSTFCMNKGSEHASNSVYFIIT 483          
BLAST of mRNA_Ecto-sp9_F_contig108.695.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA7_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 2.010e-70
Identity = 156/475 (32.84%), Postives = 250/475 (52.63%), Query Frame = 1
Query:    1 THTIMSGGALYVPEDLYDEFLGVYAREIERGNRTLAYSEKRSPDVFRMYFDLDLLDKHEMDDSSMLAIVREVQQTTALFFVGAEDEA--MKCVVSRTQTKKLEASTPATDSPRCETFIKNGVHLNFPKLLVNLDMALQIRFSVVNPLEREFGQRAASHNPWSDVIDKAPYFNGLKMTGSVRRVRCNKCDSSKKKRQTRGEKDEERLKIMREIGNIRKKLYKRHDDSFDYTNVMTFEGDEYKNVDLSNLHTKYYALSSI--CFRCNNKGWFLEQRYYSPSHILGAGGVLCCDDLQYLQSNYHEQMRWTSIRARTHDQAMPSYSVPAGHIRPPQDTASTCLRAFGSSGLQWVSPGLYREMINSDVHAEDAKGLSRWKGVTVTDKAAMDAITRCIR-GMHDKYKNIIIKQAMEIKTGKK-----TPDNKRTSNKQTAATTSNNDNVNMRLYTTVVVRVSGEGSKYCQNKGDEHTSNSV 1395
            THT+M+GG + VP + YDEFL +YA E+E  N+T+++SE RS   F MYFD+DLLD  E+     L I   +Q     F+ G+  +    +CVV  T  K+++           ++  K+G H+  P L V ++ ALQIR+ VV  LE+  G R+   N WSDVIDKAPY NGLKM GS +RV   KC   KK   T  +K   +  ++  I  +R+K+Y R D  F+Y+++   + DE+K+    +++ +Y  L+    C  C N G  +E+R Y P   L   G      +  L+ +  + M++TSIR +  +     + +P G  + P +     +R F S  L  +   +    +N+D++  DA+ +  WKG  V D+  +  I + IR  + + Y ++ I++  E +  +K     +  +K  ++   A + S      + +    +V ++G GS YC NKG +HTSNSV
Sbjct:   20 THTLMTGGVVGVPHEQYDEFLRLYATEVESKNKTISFSELRSNPAFCMYFDIDLLDSKELSTEVGLRIYSLIQGVVRSFYPGSSGDTGRFQCVVCGTPPKRVDGEAGE------KSLTKSGYHITLPNLRVTVEQALQIRYCVVYELEKTLGPRSDGLNAWSDVIDKAPYTNGLKMCGSFKRV---KCTDYKKTDPTFKDK---KKALLSSIARLRRKIYPR-DRGFEYSDLADVQDDEFKDAMFGDMYGRYLELTGFNSCKTCLNTGKRIEERTYMPVLALDGSGDTDASLIDLLRDDLFKVMKYTSIRCKDGESETSGFVIPEGVPKAPTEENGANMRTFSSKKLTHLGSDVQAFTVNNDIYLSDAQTMHLWKGPRVEDERRLSVIEKFIRESVCEMYSSVQIRKVCESRLIQKVIPRASGGSKLINSLVGAHSGSIPPPPPVSVSNRYLVNIAGVGSTYCMNKGADHTSNSV 481          
BLAST of mRNA_Ecto-sp9_F_contig108.695.1 vs.
Match: Uncharacterized (protein n=1 Tax=Candidatus Kaiserbacteria bacterium TaxID=2030810 RepID=A0A2A4T359_9BACT)

HSP 1 Score: 86.7 bits (213), Expect = 2.320e-14
Identity = 47/187 (25.13%), Postives = 94/187 (50.27%), Query Frame = 1
Query:    1 THTIMSGGALYVPEDLYDEFLGVYAREIERGNRTLAYSEKRSPDVFRMYFDLDLLDKHEMDDSSMLAIVREVQQTTALFFVGAEDEAMKCVVSRTQTKKLEASTPATDSPRCETFIKNGVHLNFPKLLVNLDMALQIRFSVVNPLEREFGQRAASHNPWSDVIDKAPYFNG-LKMTGSVRRVRCNKC 558
            TH ++SGG LY+P +  D+F  +Y + I+  N+   +  + +  +F+++ DLD  +   + +  ++   + +Q     FF        +  +       +  S P   +     +  NG+H+N+P +LV++  AL +R +++   E  +G+R   +N W  V+D++ Y +G L+M GS +   C  C
Sbjct:   45 THRLLSGGVLYIPSEKMDDFFEIYTQSIK--NKQPVFVTETTTPIFKLFIDLDFCNLEIIPNEKIIEHCKYIQGIIGEFFKNIYSVEERIAI-------ISISPPKEKNKNGAIYQANGIHMNWPNILVDIHDALLLRKAIIYAFESRYGRRPF-YNTWDQVVDESIYHHGGLRMIGSRKTKICKYC 221          
BLAST of mRNA_Ecto-sp9_F_contig108.695.1 vs.
Match: Uncharacterized (protein n=1 Tax=Acanthamoeba castellanii medusavirus TaxID=2080449 RepID=A0A3T1CXP8_9VIRU)

HSP 1 Score: 86.7 bits (213), Expect = 3.470e-14
Identity = 109/487 (22.38%), Postives = 191/487 (39.22%), Query Frame = 1
Query:    1 THTIMSGGALYVPEDLYDEFLGVYAREIERGNRTLAYSEKRSPDVFRMYFDLDLLDKHEMDDSSMLAIVREVQQTTALFFVGAEDEAMKCVVSRTQTKKLEASTPATDSPRCETFIKNGVHLNFPKLLVNLDMALQIRFSVVNPLEREFGQRAASHNPWSDVIDKAPYF-NGLKMTGSVRRVRCNKCDSSKKKRQTRGEKDEERLKIMREIGNIRKKLYKRHDDSFDYTNVMTFEGDEYKNVDLSNLHTKYYALSSICFRCNNKGWFLEQRYYSPSHILGAGGVLCCDDLQYLQSNYHEQMRWTSIRARTHDQAMPSYSVPAGHIRPPQDTASTCLRAFGSSGLQWVSPGLYREMINSDVH------------AEDAKGLSRWKGVTVTDKAA-MDAITRCIRGMHDKYKNIIIKQAMEIKTGKKTPDNKRTSNKQTAATTSNNDNVNMRLYTTVVVRVSGE------GSKYCQNKGDEHTSNSVYF 1401
            +H I +GG LYVP    +EF   + +++       +Y  +R   VF ++ DLD+ D        +    R +Q+  A  F    D   + V+ +           + + PR   + K GVH+ +P +++    AL +R +++  L   FG+R    NPW  V+D+A Y  NGL+M GS +  +C +C  + K    + +  +  + + ++   +   L  +    FD     T E ++          +        C  C   G     R Y P  +L   G    D+LQ L+                 D A   Y   A  +R P DT +          ++   P   +++  SD++             +D  G+ R KG  +T + A    + + +RG   K + +++                       A TT+N+        T +    +G         K+C NKGDEHTS++++F
Sbjct:  246 SHLIFTGGVLYVPASRQNEFRYHFLKDLRVAP---SYIGERRTAVFPLFGDLDMSDLEIPSQDRLDEYYRCMQEVVAELFPDLNDYERRMVICQAPI--------SFEKPRSRRY-KTGVHVYWPGVMLTATFALVVRKAIIKKLRERFGERPLPDNPWVKVLDEAVYTSNGLRMFGSFKADKCRECRGAGKVAIAQSQ-TQSTVLLRKQPNEVHPAL--KGQTKFD--TERTAESEQXXXXXXXXXQSDANVPKEPCGLCLETGKTHVGRLYEPVLVLDGSGEPDDDELQNLK-----------------DDAEALYD--ACTLRHPTDTPT----------VEPAMPEWLKDVKESDLYDGPSDEELRRLRRKDQTGIVR-KGARLTPRDADYRPVKQSLRGNEVKARAMLMD----------------------ALTTANDYMRGGPTITRIEYESTGNYYIAKTDCKWCPNKGDEHTSSTIWF 663          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig108.695.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
Uncharacterized6.180e-12343.06protein n=1 Tax=Feldmannia species virus TaxID=394... [more]
FirrV-1-A464.340e-10839.10n=1 Tax=Feldmannia irregularis virus a TaxID=23199... [more]
EsV-1-451.080e-8236.04n=2 Tax=root TaxID=1 RepID=D8LP78_ECTSI[more]
Uncharacterized2.010e-7032.84protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.320e-1425.13protein n=1 Tax=Candidatus Kaiserbacteria bacteriu... [more]
Uncharacterized3.470e-1422.38protein n=1 Tax=Acanthamoeba castellanii medusavir... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig108contigEcto-sp9_F_contig108:7204..8795 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size1541
Cds size1443
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig108.695.1prot_Ecto-sp9_F_contig108.695.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig108 7216..8709 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928299.9607155-UTR-Ecto-sp9_F_contig108:7203..72151622928299.9607155-UTR-Ecto-sp9_F_contig108:7203..7215Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig108 7204..7215 +
1692277826.918714-UTR-Ecto-sp9_F_contig108:7203..72151692277826.918714-UTR-Ecto-sp9_F_contig108:7203..7215Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig108 7204..7215 +
1622928300.0019586-UTR-Ecto-sp9_F_contig108:8709..87951622928300.0019586-UTR-Ecto-sp9_F_contig108:8709..8795Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig108 8710..8795 +
1692277826.9468167-UTR-Ecto-sp9_F_contig108:8709..87951692277826.9468167-UTR-Ecto-sp9_F_contig108:8709..8795Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig108 8710..8795 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928299.972585-CDS-Ecto-sp9_F_contig108:7215..75061622928299.972585-CDS-Ecto-sp9_F_contig108:7215..7506Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig108 7216..7506 +
1692277826.9274602-CDS-Ecto-sp9_F_contig108:7215..75061692277826.9274602-CDS-Ecto-sp9_F_contig108:7215..7506Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig108 7216..7506 +
1622928299.9838727-CDS-Ecto-sp9_F_contig108:7557..87091622928299.9838727-CDS-Ecto-sp9_F_contig108:7557..8709Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig108 7558..8709 +
1692277826.9368405-CDS-Ecto-sp9_F_contig108:7557..87091692277826.9368405-CDS-Ecto-sp9_F_contig108:7557..8709Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig108 7558..8709 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig108.695.1

>prot_Ecto-sp9_F_contig108.695.1 ID=prot_Ecto-sp9_F_contig108.695.1|Name=mRNA_Ecto-sp9_F_contig108.695.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=481bp
MSGGALYVPEDLYDEFLGVYAREIERGNRTLAYSEKRSPDVFRMYFDLDL
LDKHEMDDSSMLAIVREVQQTTALFFVGAEDEAMKCVVSRTQTKKLEAST
PATDSPRCETFIKNGVHLNFPKLLVNLDMALQIRFSVVNPLEREFGQRAA
SHNPWSDVIDKAPYFNGLKMTGSVRRVRCNKCDSSKKKRQTRGEKDEERL
KIMREIGNIRKKLYKRHDDSFDYTNVMTFEGDEYKNVDLSNLHTKYYALS
SICFRCNNKGWFLEQRYYSPSHILGAGGVLCCDDLQYLQSNYHEQMRWTS
IRARTHDQAMPSYSVPAGHIRPPQDTASTCLRAFGSSGLQWVSPGLYREM
INSDVHAEDAKGLSRWKGVTVTDKAAMDAITRCIRGMHDKYKNIIIKQAM
EIKTGKKTPDNKRTSNKQTAATTSNNDNVNMRLYTTVVVRVSGEGSKYCQ
NKGDEHTSNSVYFCISKAAMWKCATLARIL*
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mRNA from alignment at Ecto-sp9_F_contig108:7204..8795+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig108.695.1 ID=mRNA_Ecto-sp9_F_contig108.695.1|Name=mRNA_Ecto-sp9_F_contig108.695.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1592bp|location=Sequence derived from alignment at Ecto-sp9_F_contig108:7204..8795+ (Ectocarpus species9 EcSCA_722f female)
ACGCACACCATCATGAGCGGAGGAGCGCTTTATGTCCCGGAGGATTTGTA TGACGAGTTTCTAGGTGTATATGCGAGAGAGATCGAAAGAGGAAACAGGA CTTTGGCGTACTCCGAGAAGCGGTCACCGGACGTCTTCCGCATGTACTTC GATCTGGACCTACTGGACAAGCACGAAATGGACGACAGTTCCATGCTGGC CATAGTTCGCGAGGTGCAACAGACCACCGCCCTGTTCTTCGTAGGCGCTG AAGACGAGGCCATGAAATGCGTCGTCTCTCGCACACAAACGAAGAAATTG GAAGTCAACACCACGCCACCGAAGCCTGCAGCACCACAAACAGCACTTGG GGAGGCATCGACGCCAGCAACCGACTCCCCGCGCTGCGAAACGTTTATCA AGAACGGGGTACACCTAAACTTCCCGAAGCTGCTCGTCAACCTGGACATG GCCCTACAGATACGATTCAGCGTCGTCAACCCCCTAGAACGAGAGTTCGG CCAAAGGGCGGCGTCACACAACCCATGGTCGGACGTGATAGACAAGGCGC CATATTTCAACGGCCTGAAGATGACCGGATCCGTCAGGAGAGTACGATGC AACAAGTGCGATAGCTCCAAGAAGAAAAGGCAGACGAGGGGGGAAAAGGA TGAAGAGAGGCTCAAAATCATGAGAGAAATCGGCAACATCAGGAAGAAAC TGTACAAGAGGCACGACGACTCGTTCGACTATACGAATGTCATGACGTTC GAGGGCGACGAGTACAAGAACGTTGACCTGTCCAATCTACACACAAAGTA CTACGCACTCTCCAGTATCTGTTTCAGATGCAACAACAAGGGTTGGTTCT TGGAGCAACGGTACTACTCGCCCTCGCACATACTCGGAGCAGGTGGGGTT CTTTGCTGCGACGACCTGCAATACCTACAAAGCAACTACCACGAACAGAT GCGGTGGACTAGCATCCGCGCCCGCACTCACGACCAAGCGATGCCCAGCT ACAGCGTGCCAGCCGGGCACATACGTCCACCACAAGACACAGCCTCAACA TGCTTGCGTGCCTTCGGATCGTCCGGGTTGCAATGGGTTTCCCCTGGCCT ATACAGAGAGATGATCAACTCGGACGTGCACGCGGAAGACGCCAAGGGCC TGAGCAGGTGGAAGGGGGTGACCGTCACCGACAAGGCAGCCATGGATGCC ATTACGCGCTGTATCCGCGGAATGCACGACAAGTACAAGAACATAATCAT AAAGCAAGCCATGGAGATCAAGACAGGCAAGAAAACGCCCGACAACAAAC GCACCTCGAACAAGCAGACGGCGGCCACGACATCCAACAACGACAACGTC AACATGCGTCTGTACACAACAGTTGTGGTGAGGGTGAGCGGCGAAGGATC GAAATATTGCCAAAATAAGGGCGACGAGCACACTTCCAACAGCGTGTACT TCTGCATATCGAAAGCAGCTATGTGGAAATGTGCCACTCTGGCAAGGATA CTGTAGGCTGCAGCGGCAAGACATGTAAAAAGTACAGATCCAATTCCAAG CAAACGCCTGCGAGGCTTAGCAAAATGCTCTTCCCAGAGGAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig108:7204..8795+

>mRNA_Ecto-sp9_F_contig108.695.1 ID=mRNA_Ecto-sp9_F_contig108.695.1|Name=mRNA_Ecto-sp9_F_contig108.695.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2886bp|location=Sequence derived from alignment at Ecto-sp9_F_contig108:7204..8795+ (Ectocarpus species9 EcSCA_722f female)
ATGAGCGGAGGAGCGCTTTATGTCCCGGAGGATTTGTATGACGAGTTTCT
AGGTGTATATGCGAGAGAGATCGAAAGAGGAAACAGGACTTTGGCGTACT
CCGAGAAGCGGTCACCGGACGTCTTCCGCATGTACTTCGATCTGGACCTA
CTGGACAAGCACGAAATGGACGACAGTTCCATGCTGGCCATAGTTCGCGA
GGTGCAACAGACCACCGCCCTGTTCTTCGTAGGCGCTGAAGACGAGGCCA
TGAAATGCGTCGTCTCTCGCACACAAACGAAGAAATTGGAAATGAGCGGA
GGAGCGCTTTATGTCCCGGAGGATTTGTATGACGAGTTTCTAGGTGTATA
TGCGAGAGAGATCGAAAGAGGAAACAGGACTTTGGCGTACTCCGAGAAGC
GGTCACCGGACGTCTTCCGCATGTACTTCGATCTGGACCTACTGGACAAG
CACGAAATGGACGACAGTTCCATGCTGGCCATAGTTCGCGAGGTGCAACA
GACCACCGCCCTGTTCTTCGTAGGCGCTGAAGACGAGGCCATGAAATGCG
TCGTCTCTCGCACACAAACGAAGAAATTGGAAGCATCGACGCCAGCAACC
GACTCCCCGCGCTGCGAAACGTTTATCAAGAACGGGGTACACCTAAACTT
CCCGAAGCTGCTCGTCAACCTGGACATGGCCCTACAGATACGATTCAGCG
TCGTCAACCCCCTAGAACGAGAGTTCGGCCAAAGGGCGGCGTCACACAAC
CCATGGTCGGACGTGATAGACAAGGCGCCATATTTCAACGGCCTGAAGAT
GACCGGATCCGTCAGGAGAGTACGATGCAACAAGTGCGATAGCTCCAAGA
AGAAAAGGCAGACGAGGGGGGAAAAGGATGAAGAGAGGCTCAAAATCATG
AGAGAAATCGGCAACATCAGGAAGAAACTGTACAAGAGGCACGACGACTC
GTTCGACTATACGAATGTCATGACGTTCGAGGGCGACGAGTACAAGAACG
TTGACCTGTCCAATCTACACACAAAGTACTACGCACTCTCCAGTATCTGT
TTCAGATGCAACAACAAGGGTTGGTTCTTGGAGCAACGGTACTACTCGCC
CTCGCACATACTCGGAGCAGGTGGGGTTCTTTGCTGCGACGACCTGCAAT
ACCTACAAAGCAACTACCACGAACAGATGCGGTGGACTAGCATCCGCGCC
CGCACTCACGACCAAGCGATGCCCAGCTACAGCGTGCCAGCCGGGCACAT
ACGTCCACCACAAGACACAGCCTCAACATGCTTGCGTGCCTTCGGATCGT
CCGGGTTGCAATGGGTTTCCCCTGGCCTATACAGAGAGATGATCAACTCG
GACGTGCACGCGGAAGACGCCAAGGGCCTGAGCAGGTGGAAGGGGGTGAC
CGTCACCGACAAGGCAGCCATGGATGCCATTACGCGCTGTATCCGCGGAA
TGCACGACAAGTACAAGAACATAATCATAAAGCAAGCCATGGAGATCAAG
ACAGGCAAGAAAACGCCCGACAACAAACGCACCTCGAACAAGCAGACGGC
GGCCACGACATCCAACAACGACAACGTCAACATGCGTCTGTACACAACAG
TTGTGGTGAGGGTGAGCGGCGAAGGATCGAAATATTGCCAAAATAAGGGC
GACGAGCACACTTCCAACAGCGTGTACTTCTGCATATCGAAAGCAGCTAT
GTGGAAATGTGCCACTCTGGCAAGGATACTGTAGGCATCGACGCCAGCAA
CCGACTCCCCGCGCTGCGAAACGTTTATCAAGAACGGGGTACACCTAAAC
TTCCCGAAGCTGCTCGTCAACCTGGACATGGCCCTACAGATACGATTCAG
CGTCGTCAACCCCCTAGAACGAGAGTTCGGCCAAAGGGCGGCGTCACACA
ACCCATGGTCGGACGTGATAGACAAGGCGCCATATTTCAACGGCCTGAAG
ATGACCGGATCCGTCAGGAGAGTACGATGCAACAAGTGCGATAGCTCCAA
GAAGAAAAGGCAGACGAGGGGGGAAAAGGATGAAGAGAGGCTCAAAATCA
TGAGAGAAATCGGCAACATCAGGAAGAAACTGTACAAGAGGCACGACGAC
TCGTTCGACTATACGAATGTCATGACGTTCGAGGGCGACGAGTACAAGAA
CGTTGACCTGTCCAATCTACACACAAAGTACTACGCACTCTCCAGTATCT
GTTTCAGATGCAACAACAAGGGTTGGTTCTTGGAGCAACGGTACTACTCG
CCCTCGCACATACTCGGAGCAGGTGGGGTTCTTTGCTGCGACGACCTGCA
ATACCTACAAAGCAACTACCACGAACAGATGCGGTGGACTAGCATCCGCG
CCCGCACTCACGACCAAGCGATGCCCAGCTACAGCGTGCCAGCCGGGCAC
ATACGTCCACCACAAGACACAGCCTCAACATGCTTGCGTGCCTTCGGATC
GTCCGGGTTGCAATGGGTTTCCCCTGGCCTATACAGAGAGATGATCAACT
CGGACGTGCACGCGGAAGACGCCAAGGGCCTGAGCAGGTGGAAGGGGGTG
ACCGTCACCGACAAGGCAGCCATGGATGCCATTACGCGCTGTATCCGCGG
AATGCACGACAAGTACAAGAACATAATCATAAAGCAAGCCATGGAGATCA
AGACAGGCAAGAAAACGCCCGACAACAAACGCACCTCGAACAAGCAGACG
GCGGCCACGACATCCAACAACGACAACGTCAACATGCGTCTGTACACAAC
AGTTGTGGTGAGGGTGAGCGGCGAAGGATCGAAATATTGCCAAAATAAGG
GCGACGAGCACACTTCCAACAGCGTGTACTTCTGCATATCGAAAGCAGCT
ATGTGGAAATGTGCCACTCTGGCAAGGATACTGTAG
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