mRNA_Ecto-sp9_F_contig108.694.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig108.694.1 vs.
Match: FirrV-1-A45 (n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z098_9STRA) HSP 1 Score: 179 bits (455), Expect = 3.960e-53 Identity = 89/180 (49.44%), Postives = 120/180 (66.67%), Query Frame = 1
Query: 1 MLATLNPHERDSRIGFEEEGHKYFVDGVPASSEGYVSTTTLIHSFFPKFDPDLVITNMRASSRWQHSKYYGLTSDDIKQIWDKSGKDAAAAGTAMHHNLELCQNGLPHDTTSKEFQLFNAFTADNAALRPFRTEWLMFDEDSRIPGSVDIVYTDDD--GRFFLCDFKRSKEIKRSNRWQK 534
MLA NPH RD RI F +E H Y++DG SS+GY+S TT IH F KFD D +IT M S ++ Y G+T ++IK WDK+ +AAAAGTAMH NLE+ N PH +KE+ LF ++ D + +RTE ++F ED +I GS+D+VY D + G + +CD+KRSKEIK +NR+QK
Sbjct: 2 MLAAKNPHPRDERIRFVDETHTYYIDG---SSDGYLSCTTFIHGLFGKFDADAIITKMMKSPKFAIGDYAGMTREEIKAKWDKNRDEAAAAGTAMHLNLEMYYNDEPHAENTKEWDLFCSYQKDFPDYKAYRTEMIVFAEDLKIAGSIDMVYHDPEEPGSYIICDWKRSKEIKMNNRFQK 178
BLAST of mRNA_Ecto-sp9_F_contig108.694.1 vs.
Match: FirrV-1-A45 (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLT5_9STRA) HSP 1 Score: 177 bits (449), Expect = 3.000e-52 Identity = 93/180 (51.67%), Postives = 116/180 (64.44%), Query Frame = 1
Query: 1 MLATLNPHERDSRIGFEEEGHKYFVDGVPASSEGYVSTTTLIHSFFPKFDPDLVITNMRASSRWQHSKYYGLTSDDIKQIWDKSGKDAAAAGTAMHHNLELCQNGLPHDTTSKEFQLFNAFTADNAALRPFRTEWLMFDEDSRIPGSVDIVYTDDD--GRFFLCDFKRSKEIKRSNRWQK 534
MLA NPH RD RI F E+ H Y++DG SS GY+S TT IH F FD D +IT M S ++ Y G+T +IK WDK+ +AAAAGT MH NLEL N PH KE++LF F L+ +RTE ++F ED +I GS+D+VY D D G F +CD+KRSKEIKRSNR+QK
Sbjct: 2 MLAAKNPHPRDERIRFVEDTHTYYIDG---SSTGYLSCTTFIHKAFGTFDADKIITRMMQSPKFAIGDYAGMTRKEIKAKWDKNRDEAAAAGTKMHLNLELFYNDGPHTEEGKEWELFCKFRDAFPDLKAYRTEMVVFAEDVKIAGSIDMVYHDPDEPGSFIICDWKRSKEIKRSNRFQK 178
BLAST of mRNA_Ecto-sp9_F_contig108.694.1 vs.
Match: PDDEXK_1 (domain-containing protein n=2 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CVR9_9ZZZZ) HSP 1 Score: 171 bits (434), Expect = 2.780e-50 Identity = 84/178 (47.19%), Postives = 116/178 (65.17%), Query Frame = 1
Query: 4 LATLNPHERDSRIGFEEEGHKYFVDGVPASSEGYVSTTTLIHSFFPKFDPDLVITNMRASSRWQH-SKYYGLTSDDIKQIWDKSGKDAAAAGTAMHHNLELCQNGLPHDTTSKEFQLFNAFTADNAALRPFRTEWLMFDEDSRIPGSVDIVYTDDDGRFFLCDFKRSKEIKRSNRWQK 534
LA L+PHERD RI F+E H Y++DG SSEGY+S TT HS F F+ D +I M +SS WQ +KYYG T D+IK +WDK+ ++A+AGT MH+++E N P S E++ F F D L+P+RTEW +F ED +I GS+D+V+ DG + D+KR KEI ++N + K
Sbjct: 7 LAKLHPHERDQRIVFDEGPHIYYIDG---SSEGYISCTTWNHSHFEHFNADKIIDKMMSSSSWQPGNKYYGKTKDEIKAMWDKNRDESASAGTKMHYDIESYYNECPIKNDSIEYEYFKNFLRDYGDLKPYRTEWTVFHEDVKISGSIDMVFEKPDGHLLIYDWKRCKEITKTNGFNK 181
BLAST of mRNA_Ecto-sp9_F_contig108.694.1 vs.
Match: Uncharacterized (protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0LZV4_9ZZZZ) HSP 1 Score: 169 bits (427), Expect = 6.840e-49 Identity = 89/182 (48.90%), Postives = 114/182 (62.64%), Query Frame = 1
Query: 4 LATLNPHERDSRIGFEEEGHKYFVDGVPASSEGYVSTTTLIHSFFPKFDPDLVITNMRASSRWQHSKYYGLTSDDIKQIWDKSGKDAAAAGTAMHHNLELCQNGL---PHDTTSKEFQLFNAFTADNAA-LRPFRTEWLMFDEDSRIPGSVDIVYTD-------DDGRFFLCDFKRSKEIKR 516
LA+ NPHERD+RI FE HKY +D P ++ Y S TT +HS F +FD D +I M AS W+ S YYG+T+D IK WD + AAAAGTAMH+N+E NGL D S EF+ F F D+A LRP+RTEW +FDE RI GS+D+V+ + DG + D+KR KEIK+
Sbjct: 24 LASKNPHERDARITFEPVEHKYTIDADPGTA--YTSVTTWVHSHFREFDSDAIIQRMMASRNWKASPYYGMTADAIKAAWDTNRDAAAAAGTAMHYNIECHYNGLNVPDEDANSPEFRYFLQFVQDHATTLRPYRTEWTVFDESVRISGSIDMVFENLDPATGSPDGTLSIYDWKRCKEIKK 203
BLAST of mRNA_Ecto-sp9_F_contig108.694.1 vs.
Match: Uncharacterized (protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F1H0_9ZZZZ) HSP 1 Score: 169 bits (427), Expect = 1.900e-48 Identity = 88/178 (49.44%), Postives = 111/178 (62.36%), Query Frame = 1
Query: 1 MLATLNPHERDSRIGFEEEGHKYFVDGVPASSEGYVSTTTLIHSFFPKFDPDLVITNMRASSRWQHSKYYGLTSDDIKQIWDKSGKDAAAAGTAMHHNLELCQNGLPHDTT---SKEFQLFNAFTADNAA-LRPFRTEWLMFDEDSRIPGSVDIVYTD-DDGRFFLCDFKRSKEIKRS 519
L NPH RD+RI F+ H Y +D P S Y S TT H F +FD D +IT M + W+ SKYYG+T D IK WDK+ DAAAAGT MH+N+E NG D S EFQ F F AD+ L PFRTEW++F E+ R+ GS+DIV+ + DDG F + D+KRSKEIK++
Sbjct: 73 FLEKKNPHSRDARISFDAGPHIYTIDNDP--SVKYTSVTTWNHKHFEEFDADAIITRMMSGKNWKLSKYYGMTRDKIKATWDKTRDDAAAAGTLMHYNIERVYNGCGLDDVDNGSLEFQYFRRFHADHVEHLEPFRTEWMIFHEEHRLSGSIDIVFRNLDDGTFSIYDWKRSKEIKKT 248
BLAST of mRNA_Ecto-sp9_F_contig108.694.1 vs.
Match: Uncharacterized (protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0I2Y6_9ZZZZ) HSP 1 Score: 168 bits (425), Expect = 2.150e-48 Identity = 89/178 (50.00%), Postives = 111/178 (62.36%), Query Frame = 1
Query: 1 MLATLNPHERDSRIGFEEEGHKYFVDGVPASSEGYVSTTTLIHSFFPKFDPDLVITNMRASSRWQHSKYYGLTSDDIKQIWDKSGKDAAAAGTAMHHNLELCQNG--LPH-DTTSKEFQLFNAFTADNAA-LRPFRTEWLMFDEDSRIPGSVDIVYTD-DDGRFFLCDFKRSKEIKRS 519
L NPH RD+RI F+ H Y +D P S Y S TT H F FD D +IT M + W SKYYG+T D IK WDK+ DAAAAGT MH+N+E NG L H D S EFQ F F AD+ L PFRTEW++F E+ R+ GS+DIV+ + DDG + + D+KRSKEIK++
Sbjct: 54 FLEKKNPHIRDARISFDAGPHIYTIDNDP--SVKYTSVTTWNHQHFEPFDADTIITRMMSGKNWNLSKYYGMTRDKIKATWDKTRDDAAAAGTLMHYNIERVYNGCSLDHADNGSSEFQYFRRFHADHVERLEPFRTEWMIFHEEHRLSGSIDIVFRNLDDGTYSIYDWKRSKEIKKT 229
BLAST of mRNA_Ecto-sp9_F_contig108.694.1 vs.
Match: PDDEXK_1 (domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EUR8_9ZZZZ) HSP 1 Score: 166 bits (419), Expect = 6.150e-48 Identity = 82/175 (46.86%), Postives = 109/175 (62.29%), Query Frame = 1
Query: 4 LATLNPHERDSRIGFEEEGHKYFVDGVPASSEGYVSTTTLIHSFFPKFDPDLVITNMRASSRWQHSKYYGLTSDDIKQIWDKSGKDAAAAGTAMHHNLELCQNGLPHDTTSKEFQLFNAFTADNAALRPFRTEWLMFDEDSRIPGSVDIVYTD-DDGRFFLCDFKRSKEIKRSNR 525
LA LN H RD RI F+ H Y +DG P Y S TT HS F +FD D +I +M S +W SKYYG T D IK WDK+ +AAAAGTAMH+++E N P + S E+Q F F D L P+RTEW +F E+ RI GS+D+V+ + +DG + D+KR +EIK+++R
Sbjct: 13 LARLNAHPRDKRITFDPIPHTYTIDGDPTVK--YTSVTTWNHSHFEEFDADAIIASMMRSKKWTESKYYGQTPDQIKAGWDKNRDEAAAAGTAMHYDIECFYNECPRENDSVEYQYFKQFVEDYPNLEPYRTEWTVFHEELRISGSIDMVFRNKEDGTLSIYDWKRCREIKKTDR 185
BLAST of mRNA_Ecto-sp9_F_contig108.694.1 vs.
Match: PDDEXK_1 (domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AXD3_9ZZZZ) HSP 1 Score: 165 bits (417), Expect = 9.060e-48 Identity = 78/177 (44.07%), Postives = 112/177 (63.28%), Query Frame = 1
Query: 4 LATLNPHERDSRIGFEEEGHKYFVDGVPASSEGYVSTTTLIHSFFPKFDPDLVITNMRASSRWQHSKYYGLTSDDIKQIWDKSGKDAAAAGTAMHHNLELCQNGLPHDTTSKEFQLFNAFTADNAALRPFRTEWLMFDEDSRIPGSVDIVYTDDDGRFFLCDFKRSKEIKRSNRWQK 534
L LNPH +D I F++EGH Y V G Y S TT IHS F +FDPD +I NM S +W ++KYYG+T D+IKQ+WD + AA AGT +H+++E N + S E++ F F D L+P+RTE L++DE ++ GS+D+++ DG F + D+KRSKEI + ++W K
Sbjct: 6 LKKLNPHPKDDDIKFKDEGHIYTVKGCT----DYTSVTTWIHSLFEEFDPDKIIDNMMNSPKWSNNKYYGMTKDEIKQLWDNNRDSAALAGTKIHYDIECTYNNMNVVNDSLEYKYFLNFKNDFNKLQPYRTEMLVYDEKLKLSGSIDMIFKCQDGSFEIYDWKRSKEILKVSKWDK 178
BLAST of mRNA_Ecto-sp9_F_contig108.694.1 vs.
Match: PDDEXK_1 (domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0EYD6_9ZZZZ) HSP 1 Score: 165 bits (417), Expect = 1.010e-47 Identity = 82/175 (46.86%), Postives = 109/175 (62.29%), Query Frame = 1
Query: 4 LATLNPHERDSRIGFEEEGHKYFVDGVPASSEGYVSTTTLIHSFFPKFDPDLVITNMRASSRWQHSKYYGLTSDDIKQIWDKSGKDAAAAGTAMHHNLELCQNGLPHDTTSKEFQLFNAFTADNAALRPFRTEWLMFDEDSRIPGSVDIVYTD-DDGRFFLCDFKRSKEIKRSNR 525
LA LN H RD+RI F+ H Y +DG P Y S TT H+ F FD D +I +M S +W SKYYG T D IK WDK+ +AAAAGTAMH+++E N P D S E++ F F D L P+RTEW +F E+ RI GS+D+V+ + DDG + D+KR +EIK+++R
Sbjct: 7 LAHLNAHPRDNRITFDPVPHTYTIDGDPTIK--YTSVTTWNHAHFEGFDADAIIKSMTRSKKWTESKYYGQTPDQIKAGWDKNRDEAAAAGTAMHYDIECYYNQCPRDNQSVEYKYFKQFVEDYPNLEPYRTEWTIFHEELRISGSIDMVFRNKDDGTLSIYDWKRCREIKKTDR 179
BLAST of mRNA_Ecto-sp9_F_contig108.694.1 vs.
Match: PD-(D/E)XK (nuclease family protein n=1 Tax=Nanoarchaeales archaeon TaxID=2730349 RepID=A0A8J8G5I8_9ARCH) HSP 1 Score: 164 bits (415), Expect = 1.860e-47 Identity = 75/176 (42.61%), Postives = 110/176 (62.50%), Query Frame = 1
Query: 4 LATLNPHERDSRIGFEEEGHKYFVDGVPASSEGYVSTTTLIHSFFPKFDPDLVITNMRASSRWQHSKYYGLTSDDIKQIWDKSGKDAAAAGTAMHHNLELCQNGLPHDTTSKEFQLFNAFTADNAALRPFRTEWLMFDEDSRIPGSVDIVYTDDDGRFFLCDFKRSKEIKRSNRWQ 531
L T N H RD I F +EGHKYF+ E +S T +HSFFPKF D +I M S WQ SKY+G+ ++IKQ W+ + AA GTA+H ++E N P + E++ F F D+ L+PFRTEW ++DE+ ++ GS+D+V+ D +G + L D+KRSK+IK +N+++
Sbjct: 7 LKTKNEHTRDKHITFIDEGHKYFIK----KEEYNLSVTGFVHSFFPKFKADEIIGKMMMSRNWQSSKYFGMEVEEIKQAWEDNANQAAELGTALHKSIEEFYNNTPTPMDTVEYKYFEEFEIDHNTLKPFRTEWEIYDEELKLAGSIDMVFEDKEGNYHLYDWKRSKQIKENNQYE 178 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig108.694.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig108.694.1 >prot_Ecto-sp9_F_contig108.694.1 ID=prot_Ecto-sp9_F_contig108.694.1|Name=mRNA_Ecto-sp9_F_contig108.694.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=178bp MLATLNPHERDSRIGFEEEGHKYFVDGVPASSEGYVSTTTLIHSFFPKFDback to top mRNA from alignment at Ecto-sp9_F_contig108:4802..5335- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig108.694.1 ID=mRNA_Ecto-sp9_F_contig108.694.1|Name=mRNA_Ecto-sp9_F_contig108.694.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=534bp|location=Sequence derived from alignment at Ecto-sp9_F_contig108:4802..5335- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig108:4802..5335- >mRNA_Ecto-sp9_F_contig108.694.1 ID=mRNA_Ecto-sp9_F_contig108.694.1|Name=mRNA_Ecto-sp9_F_contig108.694.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1068bp|location=Sequence derived from alignment at Ecto-sp9_F_contig108:4802..5335- (Ectocarpus species9 EcSCA_722f female)back to top |