mRNA_Ecto-sp9_F_contig10794.690.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10794.690.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW9_ECTSI) HSP 1 Score: 477 bits (1228), Expect = 5.890e-167 Identity = 226/237 (95.36%), Postives = 231/237 (97.47%), Query Frame = 1
Query: 1 TQEGYYIFREGSA--AADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFDTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLDGEWLDVPPREGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDFDGNQPDSTTSCTS 705
T+EGYYIFREGSA AADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVF TCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRL+G+WLD+PPR+GAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDFDG QPDST S TS
Sbjct: 88 TKEGYYIFREGSAGAAADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFGTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLNGKWLDIPPRKGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDFDGYQPDSTASSTS 324
BLAST of mRNA_Ecto-sp9_F_contig10794.690.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L9W6_9PHAE) HSP 1 Score: 397 bits (1020), Expect = 2.350e-135 Identity = 186/235 (79.15%), Postives = 205/235 (87.23%), Query Frame = 1
Query: 1 TQEGYYIFREGSAAADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFDTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLDGEWLDVPPREGAFICNLGDMLQRW---TNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDFDGNQPDSTTS 696
T+EGYYIFRE +DGE DDARPL GPNQWPSE+LVPGW+ TMQ +F MHAVG RL+GLLSVGLGLDP+ F++C SE AH LRLLHYSAEVSDP KGVMGAGAH+D+GL+TLLATDEVPGLQVRL+GEWLDVPPREGAFICNLGDMLQRW TND+LRSTVHRVVNKLG ERYSIPFFFE NFDTEV C PQ CSEENPA+YPPV AG+Y++ KYSQTHQDFDGNQ + S
Sbjct: 88 TKEGYYIFRELPTPSDGEEDDARPLKGPNQWPSEDLVPGWRATMQRYFTTMHAVGVRLSGLLSVGLGLDPSFFESCTSEMAHALRLLHYSAEVSDPAKGVMGAGAHSDYGLLTLLATDEVPGLQVRLNGEWLDVPPREGAFICNLGDMLQRWRVVTNDELRSTVHRVVNKLGRERYSIPFFFELNFDTEVVCLPQCCSEENPAKYPPVTAGSYILNKYSQTHQDFDGNQQNDEKS 322
BLAST of mRNA_Ecto-sp9_F_contig10794.690.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QM00_9CHLO) HSP 1 Score: 257 bits (657), Expect = 2.080e-80 Identity = 126/226 (55.75%), Postives = 159/226 (70.35%), Query Frame = 1
Query: 1 TQEGYYIFREGSAAADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFDTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLDGEWLDVPPREGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDFDGNQ 678
T+EG+Y RE SA ++ + PL GPNQWP E+LVPG++ T+ +F + A+G RL LL++ LGL P F F+ LR LHY+AEVS PG+GV GAGAH+D+G++TLLATDEVPGLQV L+G W +V P GAFI NLGDML+RWTN +ST+HRV+N G ERYSIPFFFEPNF +V C P SE PA YPP AG +L+ Y+QTH +D N+
Sbjct: 95 TKEGFYFGREVSADSE---EGKLPLHGPNQWPPEQLVPGFRLTVTAYFDALAALGMRLLRLLALSLGLPPDYFAPHFTHPMVALRPLHYTAEVSAPGQGVFGAGAHSDYGMLTLLATDEVPGLQVHLNGSWQEVAPLPGAFIVNLGDMLERWTNGLFKSTLHRVINTTGQERYSIPFFFEPNFTAKVECLPCCVSEARPAAYPPTTAGEHLLAMYAQTHAGYDVNK 317
BLAST of mRNA_Ecto-sp9_F_contig10794.690.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WWS1_9CHLO) HSP 1 Score: 254 bits (650), Expect = 5.230e-79 Identity = 119/224 (53.12%), Postives = 153/224 (68.30%), Query Frame = 1
Query: 1 TQEGYYIFREGSAAADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFDTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLDGEWLDVPPREGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDFDG 672
T+EG+Y RE A + + +PL GPNQWP E L+PG + T Q++F + A+G RL LL++ L L P F F LR LHYS +SDPG+G+ GAGAHTD+G++T+LATDEVPGLQ+R +G+W V PR GAFI NLGDM++RWTN +ST+HRV+N G ERYSI +FFEP FD V C PQ C +NP RYPP AG +L+ KY+ TH + G
Sbjct: 122 TKEGFYFGREVPADSP---EALKPLHGPNQWPEESLMPGLRDTYQQYFEELRALGMRLLRLLALALDLPPLYFHPYFEPPMIMLRPLHYSGVISDPGEGIFGAGAHTDYGMLTILATDEVPGLQIRQNGKWTHVSPRNGAFIINLGDMVERWTNGSFKSTLHRVINTTGSERYSIAYFFEPCFDAVVECLPQCCGGDNPPRYPPTTAGQHLLDKYAATHAGYTG 342
BLAST of mRNA_Ecto-sp9_F_contig10794.690.1 vs.
Match: Hypothetical (protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YQ36_9CHLO) HSP 1 Score: 244 bits (624), Expect = 1.450e-75 Identity = 119/224 (53.12%), Postives = 148/224 (66.07%), Query Frame = 1
Query: 1 TQEGYYIFREGSAAADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFDTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLDGEWLDVPPREGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDFDG 672
T+EG+Y RE AAD + ++PL GPNQWP E LVPG + +F + A+G +L L+++ L L P FD F + +LR LHYS S PG GV GAGAHTD+G++T+L TDEVPGLQ+ G W DVPP GAFI NLGDML+RWTN ST+HRVVN G ERYSI FFFEPNF+ V C PQ C + P +YPP AG +L+ KY+ TH + G
Sbjct: 92 TKEGFYFGRE--IAADSP-EASKPLHGPNQWPDEALVPGLRDAYTRYFNALWALGTKLLRLVALALDLPPDHFDPHFQQPIVSLRPLHYSGTKSAPGDGVFGAGAHTDYGMLTILKTDEVPGLQIHTSGAWRDVPPMPGAFIINLGDMLERWTNGMFHSTLHRVVNTTGQERYSIAFFFEPNFEAIVECLPQCCGPDRPPKYPPTTAGQHLLDKYAATHAGYSG 312
BLAST of mRNA_Ecto-sp9_F_contig10794.690.1 vs.
Match: Hypothetical (protein n=2 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QLD7_DUNTE) HSP 1 Score: 243 bits (619), Expect = 2.130e-75 Identity = 118/224 (52.68%), Postives = 155/224 (69.20%), Query Frame = 1
Query: 1 TQEGYYIFREGSAAADGEHDDAR-PLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFDTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLDGE-WLDVPPREGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDF 666
T+EG+Y RE S E +A+ PL GPNQWP+E LVPG++ +M+++ M+ +G RL LL++GLGL P FD F LR LHY+ +VS P +GV GAGAH+D+G++TLL TD+VPGLQ+ D W+DVPP+ FI NLGDML+RWTN +ST+HRVVN G ERYS+ FFEPNFDT V C PQ CS E P ++PP +G +L+ KY+ TH +
Sbjct: 48 TKEGFYFGREISP----ESPEAKLPLHGPNQWPNEHLVPGYRASMEQYMRAMNELGHRLLRLLALGLGLPPDHFDRFFDRPMIFLRPLHYAPKVSAPSEGVFGAGAHSDYGMLTLLKTDDVPGLQIHTDATGWMDVPPKPECFIINLGDMLERWTNGMYKSTLHRVVNTTGKERYSLACFFEPNFDTIVECLPQCCSPERPPQFPPTTSGQHLLDKYASTHAGY 267
BLAST of mRNA_Ecto-sp9_F_contig10794.690.1 vs.
Match: Hypothetical (protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VI83_DUNTE) HSP 1 Score: 243 bits (619), Expect = 8.200e-75 Identity = 118/224 (52.68%), Postives = 155/224 (69.20%), Query Frame = 1
Query: 1 TQEGYYIFREGSAAADGEHDDAR-PLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFDTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLDGE-WLDVPPREGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDF 666
T+EG+Y RE S E +A+ PL GPNQWP+E LVPG++ +M+++ M+ +G RL LL++GLGL P FD F LR LHY+ +VS P +GV GAGAH+D+G++TLL TD+VPGLQ+ D W+DVPP+ FI NLGDML+RWTN +ST+HRVVN G ERYS+ FFEPNFDT V C PQ CS E P ++PP +G +L+ KY+ TH +
Sbjct: 91 TKEGFYFGREISP----ESPEAKLPLHGPNQWPNEHLVPGYRASMEQYMRAMNELGHRLLRLLALGLGLPPDHFDRFFDRPMIFLRPLHYAPKVSAPSEGVFGAGAHSDYGMLTLLKTDDVPGLQIHTDATGWMDVPPKPECFIINLGDMLERWTNGMYKSTLHRVVNTTGKERYSLACFFEPNFDTIVECLPQCCSPERPPQFPPTTSGQHLLDKYASTHAGY 310
BLAST of mRNA_Ecto-sp9_F_contig10794.690.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HV59_KLENI) HSP 1 Score: 238 bits (606), Expect = 9.980e-73 Identity = 121/230 (52.61%), Postives = 149/230 (64.78%), Query Frame = 1
Query: 1 TQEGYYIFREGSAAADGEHDDA-RPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFDT--CFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLDGE-----WLDVPPREGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDF 666
T+EGYY+ RE +H DA +PL GPN WP L+P W+ TM+ + M + +L + + LGL F F LRLLHY+ E S P +GV GAGAH+DWG++TLL TD VPGLQ+ L+ + WLDVPP EGAFI N+GDML+RW+ND RST+HRVV + G ER+SIPFFFEPNFD V C PQ CS NPA+YPPV G YLMGK TH +
Sbjct: 99 TKEGYYMGREVPL----DHPDASKPLHGPNVWPDPALLPDWRPTMERYQAAMIQLALKLTDFIGLALGLPEGFFKKPGMFDNPMTVLRLLHYTEEKSAPEEGVFGAGAHSDWGMLTLLKTDSVPGLQICLEKDAENQTWLDVPPVEGAFIVNIGDMLERWSNDLFRSTLHRVVGR-GQERFSIPFFFEPNFDCLVECLPQCCSPSNPAKYPPVTVGEYLMGKLKSTHAGY 323
BLAST of mRNA_Ecto-sp9_F_contig10794.690.1 vs.
Match: Hypothetical (protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S1L0_9CHLO) HSP 1 Score: 238 bits (606), Expect = 1.520e-72 Identity = 115/224 (51.34%), Postives = 146/224 (65.18%), Query Frame = 1
Query: 1 TQEGYYIFREGSAAADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFDTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLDGEWLDVPPREGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDFDG 672
T+EG+Y R+ A + + + PL GPNQWP EELVPG++ T + + M A+G R+ +L++ LGL PA F+ F+ LR LHY A SDP GV GAGAHTD+GL+T LATDEVPGLQ+ G W DV PR G I NLGDML+RWTN RST+HRVV + G ERYS+ F+EPNF V C P C + P RYPP AG +++ KY+ TH + G
Sbjct: 108 TKEGFYFGRDIPADSP---EASLPLHGPNQWPREELVPGYRATAEAYLAAMMALGARMLRVLALSLGLPPAHFERHFTSPMVFLRPLHYDATRSDPDAGVFGAGAHTDYGLLTFLATDEVPGLQIHAGGAWRDVAPRPGCLIVNLGDMLERWTNGRYRSTLHRVVTRGGQERYSVACFYEPNFTARVECLPCCCGPDAPPRYPPTTAGQHILDKYASTHAGYTG 328
BLAST of mRNA_Ecto-sp9_F_contig10794.690.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LKH6_9CHLO) HSP 1 Score: 237 bits (604), Expect = 3.520e-72 Identity = 116/231 (50.22%), Postives = 152/231 (65.80%), Query Frame = 1
Query: 1 TQEGYYIFREGSAAADGEHDDARPLSGPNQWPSEELVPGWKTTMQEHFVRMHAVGERLAGLLSVGLGLDPAVFDTCFSEFAHTLRLLHYSAEVSDPGKGVMGAGAHTDWGLMTLLATDEVPGLQVRLDGEWLDVPPREGAFICNLGDMLQRWTNDDLRSTVHRVVNKLGLERYSIPFFFEPNFDTEVACFPQFCSEENPARYPPVKAGAYLMGKYSQTHQDFDGNQPDSTT 693
T+EGYYI RE A + + PL GPN WP E+L+PG++ T + +F + A+G RL LL++ L L+P FD F LR LHYSAEVS PG GV GAGAH+D+G++T+LATD PGLQV + G W+DVP F+CNLGDML+RWTN +ST+HRVV+ G +RYSIPFFFEPNF+ V P + + PA YPP AG +L+ KY+ TH + + + T
Sbjct: 105 TKEGYYIGREVPADSP---EAQLPLHGPNLWPPEKLLPGFRATTEAYFSSVTALGHRLLRLLAISLDLEPGHFDPFFDPPMVFLRPLHYSAEVSRPGDGVFGAGAHSDYGMLTVLATDGQPGLQVHVGGAWVDVPAAPRCFVCNLGDMLERWTNGLYKSTLHRVVSTTGRDRYSIPFFFEPNFNAVVEALPCCVTADRPAAYPPTTAGRHLLEKYAATHAGYGNGEAAAAT 332 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10794.690.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10794.690.1 >prot_Ecto-sp9_F_contig10794.690.1 ID=prot_Ecto-sp9_F_contig10794.690.1|Name=mRNA_Ecto-sp9_F_contig10794.690.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=193bp MQEHFVRMHAVGERLAGLLSVGLGLDPAVFDTCFSEFAHTLRLLHYSAEVback to top mRNA from alignment at Ecto-sp9_F_contig10794:201..4351+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10794.690.1 ID=mRNA_Ecto-sp9_F_contig10794.690.1|Name=mRNA_Ecto-sp9_F_contig10794.690.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4151bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10794:201..4351+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10794:201..4351+ >mRNA_Ecto-sp9_F_contig10794.690.1 ID=mRNA_Ecto-sp9_F_contig10794.690.1|Name=mRNA_Ecto-sp9_F_contig10794.690.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1158bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10794:201..4351+ (Ectocarpus species9 EcSCA_722f female)back to top |