mRNA_Ecto-sp9_F_contig1077.671.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1077.671.1
Unique NamemRNA_Ecto-sp9_F_contig1077.671.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: SufE (domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD56_9PHAE)

HSP 1 Score: 532 bits (1370), Expect = 6.250e-186
Identity = 295/319 (92.48%), Postives = 301/319 (94.36%), Query Frame = 2
Query:   62 MVARAAILSVALTTSVCSVGEAFVTPNVAVVPGGAFSSHRAAQAARPRRPAARAAEPARSGHD-APLMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGLAGLL-AMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDESGGEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEVGM 1012
            MVARAAILSVAL+TSVCSVGE+FVTPNVAVVPGGAFSSHRAAQAAR RRPAA      RSG D APLMSTSTDLK+LGLTPELERLTKVFRSCPTDKMRQMQLLHL QMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKG A LL AMGLSGNSPEAIQTVKPEFIQVAGLQASL AGRNNGFINMLRTMKGKALALGGESAIRAA+EQAAPAAE AAPEE E+SGTMASR+TEKLQKLEPLKLVIEDESGGEESKFMI IVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEE GM
Sbjct:    1 MVARAAILSVALSTSVCSVGESFVTPNVAVVPGGAFSSHRAAQAARSRRPAAXXXXXXRSGRDDAPLMSTSTDLKQLGLTPELERLTKVFRSCPTDKMRQMQLLHLTQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGSARLLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLAAGRNNGFINMLRTMKGKALALGGESAIRAAMEQAAPAAETAAPEEAEESGTMASRVTEKLQKLEPLKLVIEDESGGEESKFMIKIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEAGM 319          
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: Cysteine (desulfuration protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLM4_9STRA)

HSP 1 Score: 225 bits (574), Expect = 5.420e-66
Identity = 137/260 (52.69%), Postives = 168/260 (64.62%), Query Frame = 2
Query:  257 LMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKAL-ALGGESAIRAAVEQAAPAAEEAAPEEPEQSGT-------MASRITEKLQKLEPLKLVIEDESGGEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEVGM 1012
            LMST+  ++ELGLT ELERL K FRS P DKMR  QLL +A  G ++    +T +NKV GCLSTV+V A++K G +Y+  DSDA +TKGL  +L  GLSGN+   IQ+VKPEFIQVAGLQ SLT GRNNGFINML TMK KAL A                     A  E +  G        M + I  KLQ L P++L +EDES  +E KF I +VS +FEGL L+KRH+ V+  +ADEMK VHAV L TKTP E+G+
Sbjct:   60 LMSTAPSIQELGLTRELERLVKAFRSMPDDKMRYKQLLFMAAQGAELPSEFKTTDNKVQGCLSTVHVVAKMKQGKVYFEGDSDAQLTKGLLSILIRGLSGNAAADIQSVKPEFIQVAGLQTSLTPGRNNGFINMLSTMKRKALQAEXXXXXXXXXXXXXXXXXXXXADSEGDDMGVAEVPGKPMTTAIMRKLQALRPVRLQVEDESE-DEQKFYIAVVSSAFEGLPLVKRHQLVHLTIADEMKQVHAVQLSTKTPAEMGL 318          
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: Cysteine (desulfuration protein SufE (Plastid) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XAG5_GALSU)

HSP 1 Score: 186 bits (472), Expect = 6.550e-51
Identity = 120/267 (44.94%), Postives = 160/267 (59.93%), Query Frame = 2
Query:  275 DLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALA----LGGES------AIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDES------------GGEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKI-VHAVTLDTKTPEEV 1006
            D K+LGLTPEL RL K F + P  K+R  QLL+LAQ  + +    +T ENKV GCLSTV+V  +  +  I++  DSDA +TKGL  LL  GL+G + E I+ + PEF+ VAGL  SLT GRNNGF+NML+TMK KA      L G S      + R    QA+P+  E A      SG + S I EKLQKL+P +L + D+S               E+ F + +VS +F GL+L+KRH+ VY L+  E+K  +HA+ +  KTP EV
Sbjct:   64 DEKKLGLTPELARLVKSFAAAPDPKLRVQQLLYLAQTLEPLPFQYKTNENKVPGCLSTVHVVGDCDNEKIFFKGDSDAQLTKGLLALLIKGLNGCTVEEIERISPEFVTVAGLSVSLTPGRNNGFLNMLQTMKNKAKEAASKLNGVSREGRNYSDRVPKTQASPSTAETA------SGPIYSAIVEKLQKLKPSRLEVHDDSFQHAGHVGAKGLRSSETHFSVYVVSDAFVGLSLVKRHQLVYTLLGQELKEGLHALRIQAKTPSEV 324          
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: Hypothetical (protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T9Y1_9RHOD)

HSP 1 Score: 179 bits (454), Expect = 1.200e-48
Identity = 118/254 (46.46%), Postives = 150/254 (59.06%), Query Frame = 2
Query:  275 DLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYV-AAEVKDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDES-----------GGEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKI-VHAVTLDTKTP 997
            +L  LGLTPELERLT+ F   P  KMR  QLL +AQ    MD +L T ENKV GCLSTVYV A+   DG ++   DSDA +TKGL  LL  GL G + E I+ V PEFIQ +GL  SLT GRNNGF+NML  +K KA A   +S +        P  E   P +   +G +  RI +KL  L+P +LVI D+S              E+ F I I S +FE LT ++RHR +Y L+A E+   VHA+ +D +TP
Sbjct:   46 ELDALGLTPELERLTRQFSMVPDPKMRYQQLLFMAQELPSMDTSLMTSENKVPGCLSTVYVHASRNGDGTVHLVGDSDAQLTKGLIALLIQGLDGKTVEEIERVSPEFIQASGLAVSLTPGRNNGFLNMLAKIKAKARACI-DSPVEVLSATPDPVVERNIPPD---AGPIYRRIAQKLSVLKPTELVISDKSKQHSGHPGNLQAKTETHFSIRIRSTAFEPLTPVQRHRVIYTLLAQELNDGVHALQIDAQTP 295          
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: SufE (domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XHT0_DIALT)

HSP 1 Score: 173 bits (439), Expect = 1.610e-46
Identity = 120/271 (44.28%), Postives = 156/271 (57.56%), Query Frame = 2
Query:  236 RSGHDAPLMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEV-KDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEK-LQKLEPLKLVIEDESG------------GEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMK-IVHAVTLDTKTPEE 1003
            R  H   LMS S     LGLTPELE++ +VF+  P  K+R  QLL LAQ    MD  L+  ENKV GCLSTV+V A     G I+Y+ DSDAM+TKGL  LL  GLSG++ + I  V P+FIQ AG+ ASLT GRNNG +NML  MK KA AL G  A+ +    A P+A   AP        +A  I  K L KL+P  + + D S               E+ F + +VS  F GL+L++RH+ +Y L+A+EM   VHA+ +  +T  E
Sbjct:   28 RVAHAGMLMSAS-----LGLTPELEQVVEVFKMVPDQKLRYQQLLFLAQKAKPMDAVLKVPENKVPGCLSTVFVHATADSSGNIFYTGDSDAMLTKGLVVLLTDGLSGHTADEILAVDPKFIQEAGIAASLTPGRNNGLLNMLALMKQKAKALAGV-AVPSGPSAANPSASPPAPVVEGGGAPVADSIIGKVLAKLKPTTVRLRDNSAQHAGHAGREGLAASETHFALEVVSDVFSGLSLVQRHQLIYALLAEEMAGSVHALQITARTTAE 292          
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: SufE (domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9T0_FISSO)

HSP 1 Score: 170 bits (431), Expect = 1.230e-45
Identity = 115/262 (43.89%), Postives = 146/262 (55.73%), Query Frame = 2
Query:  266 TSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYV---AAEVKDGLIY--YSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIED----------ESGGEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEV 1006
            T TD   + LTPEL ++   F S   DK+R  QLL++A     +DP+    ENKV GCLSTVYV   A +  DG+I   +  DSD ++TKGL  LL  GLSGN+ E IQ V P FIQ  G+ ASLT GRNNGF+NML  MK KA  L          E A   A +  P        M   I + LQ L+P+ L +ED           S   E+ F + IV+ +FEGL L+KRH+ VY L+ D M  +HA+ +  KTPEEV
Sbjct:   16 THTD-NPMRLTPELLKIANAFESIGDDKLRYKQLLYMATQLSPIDPSQAIPENKVPGCLSTVYVDGTAVDKGDGVIRIEFVGDSDGLLTKGLVALLVRGLSGNTAEDIQNVDPGFIQKTGIAASLTPGRNNGFLNMLNVMKIKAKQLEANYQATGPSESATTTAGDEKP--------MYQAIVQGLQALKPVSLKLEDVSYQHAGHREASKDGETHFNLEIVASAFEGLNLVKRHKLVYMLLGDVMPRIHALQISAKTPEEV 268          
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q629_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.310e-45
Identity = 108/274 (39.42%), Postives = 158/274 (57.66%), Query Frame = 2
Query:  260 MSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDG-----LIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALAL-------GGESAIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDESGGE-------------ESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEV 1006
            M+ +++++ LGLTPELE++TK F S P +K+R  QLL++A     +DP L   ENKV GCLSTVYV    +D      ++ +  DSD  +TKGL  LL  G+SG + E IQ V PEFI  A +  SLT GRNNGF+NML  MK KA +        GGE A  A  E    + +E A         M + + E L KL+P+ L + D+S                ES F++N+V++ F+G+ L+KRH+ +Y ++ + M  +HA++++ K P +V
Sbjct:   50 MADTSEIEALGLTPELEKMTKAFGSIPDEKLRYKQLLYMANQLKPLDPKLMVSENKVPGCLSTVYVDCTARDNEEGETVLDFVGDSDGQLTKGLVALLVRGMSGCTAEQIQKVDPEFINAAKITQSLTPGRNNGFLNMLAVMKAKATSYSVGADNSGGEEA-DADTEGVISSFDEIA------GKPMYNDMMESLLKLKPVTLELIDDSASHAGHAGSKGWEESGESHFVLNMVAEVFDGMPLVKRHQLIYLVLGETMDKIHALSINAKAPSQV 316          
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: SufE (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCV6_9STRA)

HSP 1 Score: 170 bits (431), Expect = 3.650e-45
Identity = 112/262 (42.75%), Postives = 151/262 (57.63%), Query Frame = 2
Query:  257 LMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDESG-----------GEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEVG 1009
            + ST  D   LGLTP L  +++ F+    ++ R   LL LA     M    +  ENKV GCLSTVYV A ++DG +Y+  DSDA +TKGL  LL  G+SG S E IQ VKPEFI+ AG+ ASLT GRNNGF+NML  +K KA+    +       E A    E+ A   P  S  M   I      L+P +L ++D+S            G ES F + IV+  FEGL+L++RH+ VY ++A EM+ +HA+++D KTP E G
Sbjct:   56 MSSTDIDESSLGLTPRLFEVSRAFQLMD-ERTRVQNLLALASSMKPMKDFRKLPENKVPGCLSTVYVHAFMQDGKVYFEGDSDAQLTKGLVALLIEGMSGCSAEEIQAVKPEFIKYAGIAASLTPGRNNGFLNMLAMLKRKAVEAESKGEGAGQEEPAVEFQEDIA--RPVYSSCMKKLINF----LKPKRLEMQDDSAQHAGHAGAKGLGGESHFSLRIVADCFEGLSLVQRHKLVYTVLAAEMQQIHALSIDAKTPAEAG 310          
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLB0_9RHOD)

HSP 1 Score: 163 bits (413), Expect = 8.450e-43
Identity = 107/266 (40.23%), Postives = 151/266 (56.77%), Query Frame = 2
Query:  257 LMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGL--IYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESA---IRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDES--------GGEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKI----VHAVTLDTKTPEE 1003
            + +   ++  L LTP LE++    +  P  K+R  QLLH A     M+P L+TE NKV GCLSTV+V AE+      +Y+  DSDA +TKGL  +L  GLSG++   I+ V P+FI+ +GL  SLT GRNNGFINML+ MK KA  L  E+A    R+  +    A E   P +P      A+ I   L +L P++L +ED S         G+E+   I +VS++FE + L+ RH+ +Y L+   M      VHA+ +DTK P E
Sbjct:   30 MTAADVEMSSLNLTPALEKMVSSLKMFPDSKVRYQQLLHYASTLGPMEPELKTEMNKVPGCLSTVFVHAEMNPDTRKVYFKGDSDAQLTKGLVSMLVNGLSGSTALQIEKVNPDFIKASGLTVSLTPGRNNGFINMLKLMKRKAAVLDEEAAGLGPRSTGQTDEDAVEFEVPGKPR-----ATAIGRALMQLNPIELEVEDFSESHKGHAHAGDETHIRIKVVSEAFEDMPLVLRHKVIYTLLDSFMDKGSGGVHALQMDTKAPGE 290          
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3L9_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.430e-42
Identity = 114/275 (41.45%), Postives = 154/275 (56.00%), Query Frame = 2
Query:  269 STDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVK------DGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRA-----AVEQ-----AAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDES----------GGEES---KFMINIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEV 1006
            +T    LGLTPEL R+T  F S P +KMR  QLL +A     + P     ENKV GCLSTVYV A ++      + ++ +  +SD ++TKGL  LL  GLSG + E +Q V PEFI  A +  SLT GRNNGF+NML  MK KA  +GG  A  A     +VE+     AA    E    +P  +  MA   T     L+P  + + D S          G EES    F INIV+++F+GL+L+KRH+ VY L+ D M+ +HA+ +  +TP+EV
Sbjct:   76 ATTADPLGLTPELRRMTDAFASIPDEKMRYKQLLFMANQLPAISPDAMVPENKVPGCLSTVYVDAVMERDEERGEDVVKFLGESDGLLTKGLVALLVRGLSGCTAEEVQRVNPEFIHEAKISQSLTPGRNNGFLNMLAVMKKKAAEIGGPEAAAAGDDAGSVEEGEDEVAATLTFEEVEGKPMYNAMMAKLTT----MLKPTSIELVDNSDQHAGHAGSKGWEESGESHFSINIVAEAFDGLSLVKRHQLVYMLLGDIMQKIHALQIVARTPDEV 346          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
SufE6.250e-18692.48domain-containing protein n=3 Tax=Ectocarpus TaxID... [more]
Cysteine5.420e-6652.69desulfuration protein n=1 Tax=Tribonema minus TaxI... [more]
Cysteine6.550e-5144.94desulfuration protein SufE (Plastid) n=1 Tax=Galdi... [more]
Hypothetical1.200e-4846.46protein n=1 Tax=Compsopogon caeruleus TaxID=31354 ... [more]
SufE1.610e-4644.28domain-containing protein n=1 Tax=Diacronema luthe... [more]
SufE1.230e-4543.89domain-containing protein n=2 Tax=Fistulifera sola... [more]
Hypothetical2.310e-4539.42protein n=1 Tax=Chaetoceros debilis TaxID=122233 R... [more]
SufE3.650e-4542.75domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Hypothetical8.450e-4340.23protein n=1 Tax=Rhodosorus marinus TaxID=101924 Re... [more]
Hypothetical1.430e-4241.45protein n=2 Tax=Odontella aurita TaxID=265563 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1077contigEcto-sp9_F_contig1077:6725..11813 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score580.1
Seed ortholog evalue6.3e-163
Seed eggNOG ortholog2880.D7G7R0
Preferred namebola1
KEGG koko:K22066
EggNOG free text desc.protein maturation by iron-sulfur cluster transfer
EggNOG OGsCOG0271@1,KOG2313@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03029
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptioncysteine desulfuration protein
Ec32 orthologEc-06_000700.1
Exons4
Model size1565
Cds size954
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1077.671.1prot_Ecto-sp9_F_contig1077.671.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1077 6786..11263 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928296.6666088-UTR-Ecto-sp9_F_contig1077:6724..67851622928296.6666088-UTR-Ecto-sp9_F_contig1077:6724..6785Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1077 6725..6785 +
1692277825.7751503-UTR-Ecto-sp9_F_contig1077:6724..67851692277825.7751503-UTR-Ecto-sp9_F_contig1077:6724..6785Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1077 6725..6785 +
1622928296.743641-UTR-Ecto-sp9_F_contig1077:11263..118131622928296.743641-UTR-Ecto-sp9_F_contig1077:11263..11813Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1077 11264..11813 +
1692277825.8194034-UTR-Ecto-sp9_F_contig1077:11263..118131692277825.8194034-UTR-Ecto-sp9_F_contig1077:11263..11813Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1077 11264..11813 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928296.6845264-CDS-Ecto-sp9_F_contig1077:6785..71591622928296.6845264-CDS-Ecto-sp9_F_contig1077:6785..7159Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1077 6786..7159 +
1692277825.7858963-CDS-Ecto-sp9_F_contig1077:6785..71591692277825.7858963-CDS-Ecto-sp9_F_contig1077:6785..7159Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1077 6786..7159 +
1622928296.7025785-CDS-Ecto-sp9_F_contig1077:7821..80191622928296.7025785-CDS-Ecto-sp9_F_contig1077:7821..8019Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1077 7822..8019 +
1692277825.7960556-CDS-Ecto-sp9_F_contig1077:7821..80191692277825.7960556-CDS-Ecto-sp9_F_contig1077:7821..8019Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1077 7822..8019 +
1622928296.7171454-CDS-Ecto-sp9_F_contig1077:8779..89501622928296.7171454-CDS-Ecto-sp9_F_contig1077:8779..8950Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1077 8780..8950 +
1692277825.803685-CDS-Ecto-sp9_F_contig1077:8779..89501692277825.803685-CDS-Ecto-sp9_F_contig1077:8779..8950Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1077 8780..8950 +
1622928296.7316144-CDS-Ecto-sp9_F_contig1077:11052..112631622928296.7316144-CDS-Ecto-sp9_F_contig1077:11052..11263Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1077 11053..11263 +
1692277825.811281-CDS-Ecto-sp9_F_contig1077:11052..112631692277825.811281-CDS-Ecto-sp9_F_contig1077:11052..11263Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1077 11053..11263 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1077.671.1

>prot_Ecto-sp9_F_contig1077.671.1 ID=prot_Ecto-sp9_F_contig1077.671.1|Name=mRNA_Ecto-sp9_F_contig1077.671.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=318bp
MVARAAILSVALTTSVCSVGEAFVTPNVAVVPGGAFSSHRAAQAARPRRP
AARAAEPARSGHDAPLMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQM
QLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAM
ITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINML
RTMKGKALALGGESAIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQ
KLEPLKLVIEDESGGEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMK
IVHAVTLDTKTPEEVGM*
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mRNA from alignment at Ecto-sp9_F_contig1077:6725..11813+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1077.671.1 ID=mRNA_Ecto-sp9_F_contig1077.671.1|Name=mRNA_Ecto-sp9_F_contig1077.671.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=5089bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1077:6725..11813+ (Ectocarpus species9 EcSCA_722f female)
CGGCGACCCAGCCCACAACGCCGCTACAATACCAGCACACGCCTACAGTT TCTACTCCAAAATGGTTGCACGAGCAGCAATTTTGTCGGTCGCCTTGACG ACAAGCGTGTGCTCGGTCGGCGAGGCCTTTGTGACGCCCAACGTCGCAGT AGTGCCAGGCGGGGCGTTTTCGTCTCACAGAGCAGCACAGGCCGCACGCC CGAGACGACCAGCAGCTCGTGCTGCTGAACCAGCCCGTAGCGGACACGAT GCCCCTCTCATGTCGACATCCACCGACCTGAAGGAGTTGGGGCTGACCCC GGAGCTGGAAAGGTTGACGAAGGTGTTCAGGTCTTGTCCCACGGACAAGA TGCGACAGATGCAGCTCCTGCACCTCGCGCAGATGGGCGACAAGATGGAC CCGGCTCTCCAGACAGAGGAGAACAAGGTCTTGGGGTGAGGTATACTACC TGTAGGGCGTGGAAACATGTTTTAGAAGCAACGTGGGTATGGCTTGGGTC TAGGTGGCGACTGTTCTCCAGCGAAACATGAACACATGATGTAGGATTCT GCTGTGTGATGTGGTAAACTGCTTGGACGAAGAGTTGAAGTCGGACGCTA GCGGCGGTCCTTTCGGCACAGCAAGTCTATACTACTGCTGTAGACCTGTA GACTGGATGCTTTTGTGTGTTGAAGCTCTCGTCAGCAGTAGCCAGAGACT TGTATGTGGTGGCATTAGTTAGAGCTCCAACGTTCACAGCAGGAACGAGT ACGTGGGCGAATGCAAACTGTACCACTGCCTGTACCGGGCTGCCAAGACT TGCAACACACACGTGACGTGTCAAGTGGACGAACGACGAGAGGTCTTCCC ACATCCGTCGTGGGCTGCGACAACAAAGGATCACAGGGCGTATCTGCATC TATTCAACCCTGCACCTGCCCAAAGGGCGTAGTGAACGGCAGCAGCAACC AACACAAAACACGAAGCTTGGGGAGGAGTGCTGTGGCGAACATCGTGGAA ATCCGAGCGATAGTGAGTGTAGTTGAGCAACGCGTCTCTTATCGCCGTCC GCTTGGCTTTGGCAACGGCCTTGATCTCGCCAACTTCGTTGTTCCAGGTG CCTCTCGACCGTGTACGTTGCGGCGGAGGTGAAGGACGGCCTAATCTACT ACTCCACGGACTCGGACGCGATGATCACCAAGGGGTTGGCAGGCCTTCTC GCGATGGGCCTTTCCGGCAACTCGCCGGAGGCCATCCAGACCGTCAAGCC AGAGTTCATCCAAGTGGCCGGCCTTCAGGCCAGCCTCACTGCCGGGTATG TACGCCGCGCTTGTCCTATCATTCGAAACGATTGTCCTGGTCGTTGATGC CCTGTTATGGTTTATTGGAGCTGTAGATAGACGCCTTTGAAGGCTACTAC TTCTATTTTCAAGGTGCTCGATGGGTGCGATATCTGCTTTGACCGCACCA AAAAGGGCGAGGCGCGATGAAGGCTCCAACTGTCCATAGTATTGCAGAGC GCACCAATCAGGGTGGGCTTCTAGACACCGTGACATCCGCCAAGCCCCTA CTGGTGTTGCATTGCATTTTGCGATCGGCCGCTTCCGTGTGAAAGTGTTG CCAGCCGCTCTTGTCGTCGTAATTGTTTTACCCGCTGGAGCGCACATCAC GTCGGCATCTTGATGCGGCTGGTGTATGGTTTTGTGGGTTCGCGGAGGCG ATGTATGGAGGAAGATAACTCGTATCTCCGTAGGGTACTTAATCGCCTGT AGAAAGTCGGCGCAGACTGCAAAACCCAGTATTCAGTGTTTCCGACATGA AAGTCGGCACAAACGACAATATCCTGTTTTATGTGTTTACTGGTACACGA GAGTCGGCACAGACTACACTAACAGTGTTTGCGACATGACCCCGTCCTGT AGAGCGCCCCTATTCATGTTACACTTACGTCGGGCATGGGACACATGTAC TTGGTCCGGCCCCAAGTTTAGGCGGCTTGTGCTGCGTGCTTCTGCGTTGA GTGCCCTGCCGAGCACGCACCTAAACGCACTTTGCATCGCCGCTACTGCA CGCAGGCGAAACAACGGGTTCATCAACATGCTACGGACGATGAAGGGGAA GGCGCTAGCGTTGGGCGGCGAGTCGGCCATCCGCGCGGCTGTGGAGCAAG CAGCCCCGGCGGCGGAAGAAGCGGCACCGGAGGAGCCGGAGCAAAGCGGG ACGATGGCATCACGGATAACCGAAAAGTGAGAGAGGGGAGCAATCAATCC GTAGTTGGCTTAGCATGCTGTGGACGTCGCCACTGGTTGCGTTTCCGGGA TAGACGAAAAAGCGCGATGTTTGTCGGACGACGTATTGGAGGATTCGCGT CGTGTGTCTGTTGCCGGGACAGAGACGGTGAATCCCAGGCTTGCCGTTAC CCTCGTCCTCAGGTTGGCTTTCATCCCGTGGTAATCACCATCGCTCATGG GACCTTGTTTTGGTGTAATTTTCTACGGTGACAGGTGTTGCAGATATTGG TAAGAAAACGGGCTGGGGACCCTTTTGGTCAACTGTTAGTATTTGCGGGT TCTGGTTCAAGTTCCTTTCGGTCAGATTCTGAACGGTATTTTTTCGTGCG GAAATGCCACCACAAAAAAATACCATCCCCAAAAGGCATACTATACGGTA TGGAGAAATTGGCTGTGGGAGCAGTTGTCCAAGGACAGGATAAAGGGGAA AATGTGGAGAGTGCTGAAGAAAATGACAAGAGTGTACGAAACGCGCTGTC ATGCTAGACGGAGAAATGAAGTTCTTCAACATTGAACAGGGGTTCCCACA AGGTTGCATTTTGTCCCCAACATTGTTCGAGGTGTTCATATAGGATCTGT TGTAGCTCGTAGAGACAGTTGGGAAGGGAGTAAAGGTAGGGGAATCTTGG GTGTCGGGAATGCTGTTTGCGGTTGTTTTTTTGGGATGTCTGAATACCCT GAGGGACTTAAACTGCAGATTCACGCAGCGAAGGATTTTGCTGATATAGG TGAAGATTGTCTGCCAACGTTAGAAGAGTGCCGTCATGGTATGCAACGAG GACAGGGAGGAACCGGTAGAGTATAGATGGAAATGTAGGGCGATGAGCTT GCAGTAGTGGATCAGTACACATATCTTGGGAGTAGAGATCGCAACAGACT GTTTGTGGAATGCATACGTGTCCAAGGTAGCGGAAAGGGACAAAGCACGA GCAGGAAAGCTGCACCCTATGCTCGCAAACCGGCACCTCGATATACGCAT CAAGTAGACAGTTTTGAAGAGCGTAATCGTACCGCCGCGAAAGTATGCCG GAGAAGTATGGGAGGAAATATGAAGGTAGTCAACGAGCTCGAGGCGGCGC AGATGAAAGCAGCGAAAGTCATCCTTAGGATGGTCCAAGCGCACAAGCAA TGCAGCCGTCAGGGCAGAATTGTGGATCCAAATTCCTACGATCGGGTAAA GACGCAAGGAAGCTAACGTGGCAGTACTGTACCGCATGTGCGGTATGGGA GAGGAGAGGTTGCCGAGAATAGCTTGGGAGGCGAAGTGGTCAAACAAGAA GAGGGGTAGACAACCCACGGAATGGGTCAAGGTTGTAGATGACGAATGGA AGGAGTTCGAAACTGACGAAGGTGAAACGCCGGAAACGGAGGATCTAAGG GGGTTCAAGGAGAAGATATCTGTCGCTTTTGCCGGGAGAGAAGAACAGAA TATATAACCAAAGAAACCAAGGAGGAGGGTCTAGAAGTGTACGGCATGTT AAAGAAGGAATAGGGTTCAAGGAGTACCTACATGGACCAATGGATGCAGG GGCAACGCTGGAGATCAAATTCAGGACCAGGTACATTGGCCTTCGAGAAC GTAGACGACAAGTTCAAATGTGAATGCGGCTCCGAGTGCGAAGACCGGGT TCATGTAATTGCGGAATATCCGTTGTACAAGGGGAGGGAAGTGTACATGC CTGAGCTGGGAACAGTAGAAGGAAGATACAAGGAGATGTTTATGGCATGG AATAGCCAGGAGAAGACGGTACCTGTACTAGGACATAGGAAGTGGGTTGA GAAGGGGAGAAGTGATGTCGACAGGATCGATAGGCTAGGGAAACATTTGT GAGCGACCTTCGGCAAAGTAGGAAGGAACGGTTGACCATCGGTGATCGGT CCTGTGGGAACAATGCTCCGTCCTCTCGAGGACTCGTGGTCAATGATCTA ACCGCTAAGGCATGCAAAACATAAGAGTACGCCGACCCCCCCCCCCTTTA CTGTTGTTCATCACATCACTTCACTTTATCCCGTCTGACCTGCTGTATTC GCTTGTCTACCGCCTGTCTTATTCCTAGGCTGCAAAAGCTGGAGCCGTTG AAGCTGGTCATCGAGGACGAGTCAGGCGGGGAAGAGTCCAAGTTCATGAT TAACATCGTCAGCAAATCCTTCGAGGGCCTGACGCTGTTGAAGCGGCACC GATCCGTGTACGGCCTCATGGCCGACGAAATGAAAATAGTACACGCGGTT ACCCTAGACACGAAGACGCCCGAGGAAGTAGGAATGTAGGGTGTAGGATG CTGCGGTGTGAACGTTTTACTCGCAACACTTTCGTGATGACTTGCGACAC CTGCGTTGAGTTGCGAACCTGACTTGGCTTGCAAACCTTGCGTTGACTTG CAACAATTTTGTCGGCTTGATGTGGGCTGTGTACCACGGCAGTCATACAT GGTCAGGTCCTCTTGCGCGACTTGTTACCGTTTTTTTGCGCCTCGCTGCA TCCGTTTGTTGAGAAAAGGGTGCGCAGTTTTGTTTCTGTGGTACACTGCG TACGAAGAGCATTGGGTTTGAGTTTCGTTGCGCAGGGTACCGGTCGCCCG GTGGTCTAGTGGTGACATCGAAGTCGCGAGTCGCAGAGAAGGTCGTGAGT TCGAATCCCCATGGGGTGATAAATTTACAAAACTTGTGGGTGAAAGCGAA AAATAGCTGAAAAATCTCTCGTGAGTACCAAACTACGACGTTAGCACCGT TGATGAGGGAGAGGGACGGCTGGACTCTTCTCGCGATAGAAATAAAATTC TGCACGCATCGCAGGAAGGTGGGGCACGAAAATAAAAAC
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1077:6725..11813+

>mRNA_Ecto-sp9_F_contig1077.671.1 ID=mRNA_Ecto-sp9_F_contig1077.671.1|Name=mRNA_Ecto-sp9_F_contig1077.671.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1908bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1077:6725..11813+ (Ectocarpus species9 EcSCA_722f female)
ATGGTTGCACGAGCAGCAATTTTGTCGGTCGCCTTGACGACAAGCGTGTG
CTCGGTCGGCGAGGCCTTTGTGACGCCCAACGTCGCAGTAGTGCCAGGCG
GGGCGTTTTCGTCTCACAGAGCAGCACAGGCCGCACGCCCGAGACGACCA
GCAGCTCGTGCTGCTGAACCAGCCCGTAGCGGACACGATGCCCCTCTCAT
GTCGACATCCACCGACCTGAAGGAGTTGGGGCTGACCCCGGAGCTGGAAA
GGTTGACGAAGGTGTTCAGGTCTTGTCCCACGGACAAGATGCGACAGATG
CAGCTCCTGCACCTCGCGCAGATGGGCGACAAGATGGACCCGGCTCTCCA
GACAGAGGAGAACAAGGTCTTGGGATGGTTGCACGAGCAGCAATTTTGTC
GGTCGCCTTGACGACAAGCGTGTGCTCGGTCGGCGAGGCCTTTGTGACGC
CCAACGTCGCAGTAGTGCCAGGCGGGGCGTTTTCGTCTCACAGAGCAGCA
CAGGCCGCACGCCCGAGACGACCAGCAGCTCGTGCTGCTGAACCAGCCCG
TAGCGGACACGATGCCCCTCTCATGTCGACATCCACCGACCTGAAGGAGT
TGGGGCTGACCCCGGAGCTGGAAAGGTTGACGAAGGTGTTCAGGTCTTGT
CCCACGGACAAGATGCGACAGATGCAGCTCCTGCACCTCGCGCAGATGGG
CGACAAGATGGACCCGGCTCTCCAGACAGAGGAGAACAAGGTCTTGGGGT
GCCTCTCGACCGTGTACGTTGCGGCGGAGGTGAAGGACGGCCTAATCTAC
TACTCCACGGACTCGGACGCGATGATCACCAAGGGGTTGGCAGGCCTTCT
CGCGATGGGCCTTTCCGGCAACTCGCCGGAGGCCATCCAGACCGTCAAGC
CAGAGTTCATCCAAGTGGCCGGCCTTCAGGCCAGCCTCACTGCCGGGTGC
CTCTCGACCGTGTACGTTGCGGCGGAGGTGAAGGACGGCCTAATCTACTA
CTCCACGGACTCGGACGCGATGATCACCAAGGGGTTGGCAGGCCTTCTCG
CGATGGGCCTTTCCGGCAACTCGCCGGAGGCCATCCAGACCGTCAAGCCA
GAGTTCATCCAAGTGGCCGGCCTTCAGGCCAGCCTCACTGCCGGGCGAAA
CAACGGGTTCATCAACATGCTACGGACGATGAAGGGGAAGGCGCTAGCGT
TGGGCGGCGAGTCGGCCATCCGCGCGGCTGTGGAGCAAGCAGCCCCGGCG
GCGGAAGAAGCGGCACCGGAGGAGCCGGAGCAAAGCGGGACGATGGCATC
ACGGATAACCGAAAAGCGAAACAACGGGTTCATCAACATGCTACGGACGA
TGAAGGGGAAGGCGCTAGCGTTGGGCGGCGAGTCGGCCATCCGCGCGGCT
GTGGAGCAAGCAGCCCCGGCGGCGGAAGAAGCGGCACCGGAGGAGCCGGA
GCAAAGCGGGACGATGGCATCACGGATAACCGAAAAGCTGCAAAAGCTGG
AGCCGTTGAAGCTGGTCATCGAGGACGAGTCAGGCGGGGAAGAGTCCAAG
TTCATGATTAACATCGTCAGCAAATCCTTCGAGGGCCTGACGCTGTTGAA
GCGGCACCGATCCGTGTACGGCCTCATGGCCGACGAAATGAAAATAGTAC
ACGCGGTTACCCTAGACACGAAGACGCCCGAGGAAGTAGGAATGTAGGCT
GCAAAAGCTGGAGCCGTTGAAGCTGGTCATCGAGGACGAGTCAGGCGGGG
AAGAGTCCAAGTTCATGATTAACATCGTCAGCAAATCCTTCGAGGGCCTG
ACGCTGTTGAAGCGGCACCGATCCGTGTACGGCCTCATGGCCGACGAAAT
GAAAATAGTACACGCGGTTACCCTAGACACGAAGACGCCCGAGGAAGTAG
GAATGTAG
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