mRNA_Ecto-sp9_F_contig1077.671.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: SufE (domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD56_9PHAE) HSP 1 Score: 532 bits (1370), Expect = 6.250e-186 Identity = 295/319 (92.48%), Postives = 301/319 (94.36%), Query Frame = 2
Query: 62 MVARAAILSVALTTSVCSVGEAFVTPNVAVVPGGAFSSHRAAQAARPRRPAARAAEPARSGHD-APLMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGLAGLL-AMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDESGGEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEVGM 1012
MVARAAILSVAL+TSVCSVGE+FVTPNVAVVPGGAFSSHRAAQAAR RRPAA RSG D APLMSTSTDLK+LGLTPELERLTKVFRSCPTDKMRQMQLLHL QMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKG A LL AMGLSGNSPEAIQTVKPEFIQVAGLQASL AGRNNGFINMLRTMKGKALALGGESAIRAA+EQAAPAAE AAPEE E+SGTMASR+TEKLQKLEPLKLVIEDESGGEESKFMI IVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEE GM
Sbjct: 1 MVARAAILSVALSTSVCSVGESFVTPNVAVVPGGAFSSHRAAQAARSRRPAAXXXXXXRSGRDDAPLMSTSTDLKQLGLTPELERLTKVFRSCPTDKMRQMQLLHLTQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGSARLLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLAAGRNNGFINMLRTMKGKALALGGESAIRAAMEQAAPAAETAAPEEAEESGTMASRVTEKLQKLEPLKLVIEDESGGEESKFMIKIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEAGM 319
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: Cysteine (desulfuration protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLM4_9STRA) HSP 1 Score: 225 bits (574), Expect = 5.420e-66 Identity = 137/260 (52.69%), Postives = 168/260 (64.62%), Query Frame = 2
Query: 257 LMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKAL-ALGGESAIRAAVEQAAPAAEEAAPEEPEQSGT-------MASRITEKLQKLEPLKLVIEDESGGEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEVGM 1012
LMST+ ++ELGLT ELERL K FRS P DKMR QLL +A G ++ +T +NKV GCLSTV+V A++K G +Y+ DSDA +TKGL +L GLSGN+ IQ+VKPEFIQVAGLQ SLT GRNNGFINML TMK KAL A A E + G M + I KLQ L P++L +EDES +E KF I +VS +FEGL L+KRH+ V+ +ADEMK VHAV L TKTP E+G+
Sbjct: 60 LMSTAPSIQELGLTRELERLVKAFRSMPDDKMRYKQLLFMAAQGAELPSEFKTTDNKVQGCLSTVHVVAKMKQGKVYFEGDSDAQLTKGLLSILIRGLSGNAAADIQSVKPEFIQVAGLQTSLTPGRNNGFINMLSTMKRKALQAEXXXXXXXXXXXXXXXXXXXXADSEGDDMGVAEVPGKPMTTAIMRKLQALRPVRLQVEDESE-DEQKFYIAVVSSAFEGLPLVKRHQLVHLTIADEMKQVHAVQLSTKTPAEMGL 318
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: Cysteine (desulfuration protein SufE (Plastid) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XAG5_GALSU) HSP 1 Score: 186 bits (472), Expect = 6.550e-51 Identity = 120/267 (44.94%), Postives = 160/267 (59.93%), Query Frame = 2
Query: 275 DLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALA----LGGES------AIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDES------------GGEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKI-VHAVTLDTKTPEEV 1006
D K+LGLTPEL RL K F + P K+R QLL+LAQ + + +T ENKV GCLSTV+V + + I++ DSDA +TKGL LL GL+G + E I+ + PEF+ VAGL SLT GRNNGF+NML+TMK KA L G S + R QA+P+ E A SG + S I EKLQKL+P +L + D+S E+ F + +VS +F GL+L+KRH+ VY L+ E+K +HA+ + KTP EV
Sbjct: 64 DEKKLGLTPELARLVKSFAAAPDPKLRVQQLLYLAQTLEPLPFQYKTNENKVPGCLSTVHVVGDCDNEKIFFKGDSDAQLTKGLLALLIKGLNGCTVEEIERISPEFVTVAGLSVSLTPGRNNGFLNMLQTMKNKAKEAASKLNGVSREGRNYSDRVPKTQASPSTAETA------SGPIYSAIVEKLQKLKPSRLEVHDDSFQHAGHVGAKGLRSSETHFSVYVVSDAFVGLSLVKRHQLVYTLLGQELKEGLHALRIQAKTPSEV 324
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: Hypothetical (protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T9Y1_9RHOD) HSP 1 Score: 179 bits (454), Expect = 1.200e-48 Identity = 118/254 (46.46%), Postives = 150/254 (59.06%), Query Frame = 2
Query: 275 DLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYV-AAEVKDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDES-----------GGEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKI-VHAVTLDTKTP 997
+L LGLTPELERLT+ F P KMR QLL +AQ MD +L T ENKV GCLSTVYV A+ DG ++ DSDA +TKGL LL GL G + E I+ V PEFIQ +GL SLT GRNNGF+NML +K KA A +S + P E P + +G + RI +KL L+P +LVI D+S E+ F I I S +FE LT ++RHR +Y L+A E+ VHA+ +D +TP
Sbjct: 46 ELDALGLTPELERLTRQFSMVPDPKMRYQQLLFMAQELPSMDTSLMTSENKVPGCLSTVYVHASRNGDGTVHLVGDSDAQLTKGLIALLIQGLDGKTVEEIERVSPEFIQASGLAVSLTPGRNNGFLNMLAKIKAKARACI-DSPVEVLSATPDPVVERNIPPD---AGPIYRRIAQKLSVLKPTELVISDKSKQHSGHPGNLQAKTETHFSIRIRSTAFEPLTPVQRHRVIYTLLAQELNDGVHALQIDAQTP 295
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: SufE (domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XHT0_DIALT) HSP 1 Score: 173 bits (439), Expect = 1.610e-46 Identity = 120/271 (44.28%), Postives = 156/271 (57.56%), Query Frame = 2
Query: 236 RSGHDAPLMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEV-KDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEK-LQKLEPLKLVIEDESG------------GEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMK-IVHAVTLDTKTPEE 1003
R H LMS S LGLTPELE++ +VF+ P K+R QLL LAQ MD L+ ENKV GCLSTV+V A G I+Y+ DSDAM+TKGL LL GLSG++ + I V P+FIQ AG+ ASLT GRNNG +NML MK KA AL G A+ + A P+A AP +A I K L KL+P + + D S E+ F + +VS F GL+L++RH+ +Y L+A+EM VHA+ + +T E
Sbjct: 28 RVAHAGMLMSAS-----LGLTPELEQVVEVFKMVPDQKLRYQQLLFLAQKAKPMDAVLKVPENKVPGCLSTVFVHATADSSGNIFYTGDSDAMLTKGLVVLLTDGLSGHTADEILAVDPKFIQEAGIAASLTPGRNNGLLNMLALMKQKAKALAGV-AVPSGPSAANPSASPPAPVVEGGGAPVADSIIGKVLAKLKPTTVRLRDNSAQHAGHAGREGLAASETHFALEVVSDVFSGLSLVQRHQLIYALLAEEMAGSVHALQITARTTAE 292
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: SufE (domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K9T0_FISSO) HSP 1 Score: 170 bits (431), Expect = 1.230e-45 Identity = 115/262 (43.89%), Postives = 146/262 (55.73%), Query Frame = 2
Query: 266 TSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYV---AAEVKDGLIY--YSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIED----------ESGGEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEV 1006
T TD + LTPEL ++ F S DK+R QLL++A +DP+ ENKV GCLSTVYV A + DG+I + DSD ++TKGL LL GLSGN+ E IQ V P FIQ G+ ASLT GRNNGF+NML MK KA L E A A + P M I + LQ L+P+ L +ED S E+ F + IV+ +FEGL L+KRH+ VY L+ D M +HA+ + KTPEEV
Sbjct: 16 THTD-NPMRLTPELLKIANAFESIGDDKLRYKQLLYMATQLSPIDPSQAIPENKVPGCLSTVYVDGTAVDKGDGVIRIEFVGDSDGLLTKGLVALLVRGLSGNTAEDIQNVDPGFIQKTGIAASLTPGRNNGFLNMLNVMKIKAKQLEANYQATGPSESATTTAGDEKP--------MYQAIVQGLQALKPVSLKLEDVSYQHAGHREASKDGETHFNLEIVASAFEGLNLVKRHKLVYMLLGDVMPRIHALQISAKTPEEV 268
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q629_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.310e-45 Identity = 108/274 (39.42%), Postives = 158/274 (57.66%), Query Frame = 2
Query: 260 MSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDG-----LIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALAL-------GGESAIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDESGGE-------------ESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEV 1006
M+ +++++ LGLTPELE++TK F S P +K+R QLL++A +DP L ENKV GCLSTVYV +D ++ + DSD +TKGL LL G+SG + E IQ V PEFI A + SLT GRNNGF+NML MK KA + GGE A A E + +E A M + + E L KL+P+ L + D+S ES F++N+V++ F+G+ L+KRH+ +Y ++ + M +HA++++ K P +V
Sbjct: 50 MADTSEIEALGLTPELEKMTKAFGSIPDEKLRYKQLLYMANQLKPLDPKLMVSENKVPGCLSTVYVDCTARDNEEGETVLDFVGDSDGQLTKGLVALLVRGMSGCTAEQIQKVDPEFINAAKITQSLTPGRNNGFLNMLAVMKAKATSYSVGADNSGGEEA-DADTEGVISSFDEIA------GKPMYNDMMESLLKLKPVTLELIDDSASHAGHAGSKGWEESGESHFVLNMVAEVFDGMPLVKRHQLIYLVLGETMDKIHALSINAKAPSQV 316
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: SufE (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCV6_9STRA) HSP 1 Score: 170 bits (431), Expect = 3.650e-45 Identity = 112/262 (42.75%), Postives = 151/262 (57.63%), Query Frame = 2
Query: 257 LMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDESG-----------GEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEVG 1009
+ ST D LGLTP L +++ F+ ++ R LL LA M + ENKV GCLSTVYV A ++DG +Y+ DSDA +TKGL LL G+SG S E IQ VKPEFI+ AG+ ASLT GRNNGF+NML +K KA+ + E A E+ A P S M I L+P +L ++D+S G ES F + IV+ FEGL+L++RH+ VY ++A EM+ +HA+++D KTP E G
Sbjct: 56 MSSTDIDESSLGLTPRLFEVSRAFQLMD-ERTRVQNLLALASSMKPMKDFRKLPENKVPGCLSTVYVHAFMQDGKVYFEGDSDAQLTKGLVALLIEGMSGCSAEEIQAVKPEFIKYAGIAASLTPGRNNGFLNMLAMLKRKAVEAESKGEGAGQEEPAVEFQEDIA--RPVYSSCMKKLINF----LKPKRLEMQDDSAQHAGHAGAKGLGGESHFSLRIVADCFEGLSLVQRHKLVYTVLAAEMQQIHALSIDAKTPAEAG 310
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLB0_9RHOD) HSP 1 Score: 163 bits (413), Expect = 8.450e-43 Identity = 107/266 (40.23%), Postives = 151/266 (56.77%), Query Frame = 2
Query: 257 LMSTSTDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVKDGL--IYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESA---IRAAVEQAAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDES--------GGEESKFMINIVSKSFEGLTLLKRHRSVYGLMADEMKI----VHAVTLDTKTPEE 1003
+ + ++ L LTP LE++ + P K+R QLLH A M+P L+TE NKV GCLSTV+V AE+ +Y+ DSDA +TKGL +L GLSG++ I+ V P+FI+ +GL SLT GRNNGFINML+ MK KA L E+A R+ + A E P +P A+ I L +L P++L +ED S G+E+ I +VS++FE + L+ RH+ +Y L+ M VHA+ +DTK P E
Sbjct: 30 MTAADVEMSSLNLTPALEKMVSSLKMFPDSKVRYQQLLHYASTLGPMEPELKTEMNKVPGCLSTVFVHAEMNPDTRKVYFKGDSDAQLTKGLVSMLVNGLSGSTALQIEKVNPDFIKASGLTVSLTPGRNNGFINMLKLMKRKAAVLDEEAAGLGPRSTGQTDEDAVEFEVPGKPR-----ATAIGRALMQLNPIELEVEDFSESHKGHAHAGDETHIRIKVVSEAFEDMPLVLRHKVIYTLLDSFMDKGSGGVHALQMDTKAPGE 290
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I3L9_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.430e-42 Identity = 114/275 (41.45%), Postives = 154/275 (56.00%), Query Frame = 2
Query: 269 STDLKELGLTPELERLTKVFRSCPTDKMRQMQLLHLAQMGDKMDPALQTEENKVLGCLSTVYVAAEVK------DGLIYYSTDSDAMITKGLAGLLAMGLSGNSPEAIQTVKPEFIQVAGLQASLTAGRNNGFINMLRTMKGKALALGGESAIRA-----AVEQ-----AAPAAEEAAPEEPEQSGTMASRITEKLQKLEPLKLVIEDES----------GGEES---KFMINIVSKSFEGLTLLKRHRSVYGLMADEMKIVHAVTLDTKTPEEV 1006
+T LGLTPEL R+T F S P +KMR QLL +A + P ENKV GCLSTVYV A ++ + ++ + +SD ++TKGL LL GLSG + E +Q V PEFI A + SLT GRNNGF+NML MK KA +GG A A +VE+ AA E +P + MA T L+P + + D S G EES F INIV+++F+GL+L+KRH+ VY L+ D M+ +HA+ + +TP+EV
Sbjct: 76 ATTADPLGLTPELRRMTDAFASIPDEKMRYKQLLFMANQLPAISPDAMVPENKVPGCLSTVYVDAVMERDEERGEDVVKFLGESDGLLTKGLVALLVRGLSGCTAEEVQRVNPEFIHEAKISQSLTPGRNNGFLNMLAVMKKKAAEIGGPEAAAAGDDAGSVEEGEDEVAATLTFEEVEGKPMYNAMMAKLTT----MLKPTSIELVDNSDQHAGHAGSKGWEESGESHFSINIVAEAFDGLSLVKRHQLVYMLLGDIMQKIHALQIVARTPDEV 346 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1077.671.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1077.671.1 >prot_Ecto-sp9_F_contig1077.671.1 ID=prot_Ecto-sp9_F_contig1077.671.1|Name=mRNA_Ecto-sp9_F_contig1077.671.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=318bp MVARAAILSVALTTSVCSVGEAFVTPNVAVVPGGAFSSHRAAQAARPRRPback to top mRNA from alignment at Ecto-sp9_F_contig1077:6725..11813+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1077.671.1 ID=mRNA_Ecto-sp9_F_contig1077.671.1|Name=mRNA_Ecto-sp9_F_contig1077.671.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=5089bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1077:6725..11813+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1077:6725..11813+ >mRNA_Ecto-sp9_F_contig1077.671.1 ID=mRNA_Ecto-sp9_F_contig1077.671.1|Name=mRNA_Ecto-sp9_F_contig1077.671.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1908bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1077:6725..11813+ (Ectocarpus species9 EcSCA_722f female)back to top |