mRNA_Ecto-sp9_F_contig1072.637.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1072.637.1
Unique NamemRNA_Ecto-sp9_F_contig1072.637.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1072.637.1 vs.
Match: SAP (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVE2_9PHAE)

HSP 1 Score: 673 bits (1736), Expect = 1.130e-239
Identity = 380/497 (76.46%), Postives = 386/497 (77.67%), Query Frame = 1
Query:    1 MRSWDAVVAGLLLCACSAPTGESFHLSPSSCWTSWSSASCSHRGRSATAPAGVAAAXXXXXXXXXXXXXXXXXXXXXXKICMTEDAATAATQQQYTAEDLEALSRSELQGLCKKLNLRAVGKTSELLSRVLESHDQARGEKTSGXXXXXXXXXXXXXXXXXXXXXXXXXAELLSSVDDGGNNTXXXXGTQEKATXXXXXXXXXXAAPSIDFFLEDVRPVFDKLSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFEDDTY---------------------------------VLDVGTGGGLPGLPLAICFPKVKFTLIDGRGKKIKAVADMADRLGLTNVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFIDKNLKPNGGRTSNPADSNSSSSNNNSLKRGILYMRGEVSMEELAELGARPSTVIPLQRVLEEAGQDGDVGLGGGVDDRGYSSIFHFTSEAIWNRVPIASSEGARE 1392
            MRSWDAVVAGLLLCACSAPTGESFH  PSS WTSWSSAS SH GRSAT+ A V AA                      KI M ED ATAATQQQYTA+DLEALSRSELQGLCKKLNLRAVGKTSELLSRVLES D AR EK  G                         AELLSSVDDGGNNT    G+QEKAT XXXXXXXXXAAPS DFFLED+RPVFD+LSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFED TY                                 VLDVGTGGGLPGLPLAICFP VKFTLIDGRGKKIKAVADMADRLGL NVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFIDKNLKPN GRTSNPADS+SSSSNN SLKRGILYMRGEVS EELAELGARPSTVIPLQRVLEEAGQDGDVGLGGG DDRGYSSIFHFTSEAIWNRVPIASS GA E
Sbjct:    1 MRSWDAVVAGLLLCACSAPTGESFHFPPSSRWTSWSSASSSHSGRSATSSADVPAATTRRSSRHHSPRRSRRISRRSSKIRMAEDGATAATQQQYTAQDLEALSRSELQGLCKKLNLRAVGKTSELLSRVLESDDHARREKALGTKPATTESTASSSPKDEAPMGESTMAELLSSVDDGGNNTNYSSGSQEKATPXXXXXXXXXAAPSTDFFLEDIRPVFDELSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFEDGTYGEMRGAGEDPSRTLPPDPQPPPRREYLPSLSWSVLDVGTGGGLPGLPLAICFPMVKFTLIDGRGKKIKAVADMADRLGLRNVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFIDKNLKPNDGRTSNPADSSSSSSNN-SLKRGILYMRGEVSEEELAELGARPSTVIPLQRVLEEAGQDGDVGLGGGADDRGYSSIFHFTSEAIWNRVPIASSGGASE 496          
BLAST of mRNA_Ecto-sp9_F_contig1072.637.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0Z1_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.110e-56
Identity = 104/213 (48.83%), Postives = 139/213 (65.26%), Query Frame = 1
Query:  619 PSIDFFLEDVRPVFDKLSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFEDDTYVLDVGTGGGLPGLPLAICFPKVKFTLIDGRGKKIKAVADMADRLGLTNVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFIDKNLKPNGGRTSNPADSNSSSSNNNSLKRGILYMRGEVSMEELAELGARPSTVIPLQRVL 1257
            P    F ++V     KLS++QWA++ +LG LLTEWN K+NLISRKDI NVM RH++PCLAMA ++D +    V+DVGTGGGLPGLPLAIC P+ +F L+D RGKKI+AVADMA+RLGL +V+  H R E++ E  D ++GR+VT LP+F+ +  KNL   G     P  S        +  RGI Y++G    +EL  +  +P   I L  V 
Sbjct:   46 PKSRVFDQEVYNALPKLSNDQWAQLEKLGDLLTEWNEKVNLISRKDIDNVMVRHILPCLAMAASIDIDPGWTVMDVGTGGGLPGLPLAICNPQTQFLLVDARGKKIEAVADMAERLGLAHVKALHTRVEDINEPCDLILGRSVTALPRFMMWTRKNLVHPG-----PPGS--------TKMRGIAYIKGGNFEDELGGIDLKPEKAIALNTVF 245          
BLAST of mRNA_Ecto-sp9_F_contig1072.637.1 vs.
Match: Ribosomal (RNA small subunit methyltransferase G n=1 Tax=Puniceicoccaceae bacterium TaxID=2026784 RepID=A0A2D6WPG1_9BACT)

HSP 1 Score: 178 bits (451), Expect = 9.000e-50
Identity = 92/208 (44.23%), Postives = 130/208 (62.50%), Query Frame = 1
Query:  637 LEDVRPVFDKLSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFEDDTYVLDVGTGGGLPGLPLAICFPKVKFTLIDGRGKKIKAVADMADRLGLTNVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFIDKNLKPNGGRTSNPADSNSSSSNNNSLKRGILYMRGEVSMEELAELGARPSTVIPLQRVLE 1260
            L  ++ +F  +  E W K+    +LL+EWN K+NLISRKDI  +  RH+V CLA+   L  +    +LDVGTGGGLPGLP+AIC+P+ +FTLID  GKKIKAV  +A+ LGL NVR   +RAE++ E FDF+ GRAV NLP+F+ +I  N +                 + +SL  G+LY +G    +ELA  G  P+ +  L+++L+
Sbjct:    3 LAALKDLFPHIHPEAWFKLEYWCELLSEWNEKINLISRKDIDALAERHLVHCLAVTNILQIKGSARILDVGTGGGLPGLPMAICYPQAQFTLIDSVGKKIKAVQSIANTLGLKNVRACQMRAEQLGEHFDFITGRAVKNLPEFLSWIQNNARKG---------------HKHSLANGLLYWKGGAYSDELAPTGYVPNRIYDLEKMLK 195          
BLAST of mRNA_Ecto-sp9_F_contig1072.637.1 vs.
Match: 16s (rrna methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNU2_9STRA)

HSP 1 Score: 176 bits (447), Expect = 3.680e-48
Identity = 107/255 (41.96%), Postives = 148/255 (58.04%), Query Frame = 1
Query:  634 FLEDVRPVFDKLSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALD-FEDDTYVLDVGTGGGLPGLPLAICFPKVKFTLIDGRGKKIKAVADMADRLGLTNVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFIDKNLK--PNGGRTSNPADSNSSSSNNNSLKRGILYMRGEVSMEELAE-LGA-RPSTVIPLQRVLEEAGQDGDVGLGGGVDDRGYSSIFHFTSEAIWNRVPIASSEG 1383
            F    +  F +L+  QW ++ +LG L+ EWN K+N+ISRKD+ NV+  HV+PC+ ++K L    + T V+DVGTGGG PGLPLAIC P+VKF L+D  GKK++ V DMA RLGL NVR  H R EEV E F+FV GR+VT +P+FVG++   L   P+      P D             GILY++G VS E   E LG   P+   P+  ++            GG    G  S+ HF+ + +  R P A+++G
Sbjct:   60 FTAQAKARFPELTPVQWERLERLGALVQEWNCKVNVISRKDVENVLSHHVLPCMGISKLLSKAAEGTKVMDVGTGGGFPGLPLAICCPQVKFWLVDSIGKKVRVVGDMAVRLGLQNVRVRHTRVEEVRERFNFVTGRSVTAMPRFVGWVKDKLHAAPSAPLKGVPDD-------------GILYIKGGVSDETQEEDLGGWMPTGRYPIGELI------------GGDVYGGDKSVLHFSVQDL-RRGPDANAKG 288          
BLAST of mRNA_Ecto-sp9_F_contig1072.637.1 vs.
Match: Ribosomal (RNA small subunit methyltransferase G n=1 Tax=Sphingobacteriales bacterium TaxID=2044944 RepID=A0A4Q3BQH1_9SPHI)

HSP 1 Score: 172 bits (435), Expect = 1.920e-47
Identity = 91/209 (43.54%), Postives = 125/209 (59.81%), Query Frame = 1
Query:  637 LEDVRPVFDKLSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFEDDTYVLDVGTGGGLPGLPLAICFPKVKFTLIDGRGKKIKAVADMADRLGLTNVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFIDKNLKPNGGRTSNPADSNSSSSNNNSLKRGILYMRGEVSMEELAELGARPSTVIPLQRVLEE 1263
            ++ +   F +L+  Q  +  QLG +  EWN K+NLISRKD+ N+  RH++  L +AK ++F   T ++DVGTGGG PG+PLAI FP+V FTL+D  GKKIK V ++A+ L L NVR FH RAEE+   FDF+ GRAVT++  F G++   +K               +   N L  GILY++G    EELA    R + V PL    EE
Sbjct:    4 IDIITKYFHELNPAQIKQFEQLGIVFPEWNDKINLISRKDVENLYERHILHSLGIAKVINFSSGTQIMDVGTGGGFPGIPLAIMFPEVAFTLVDSIGKKIKVVQEVAEALELKNVRAFHARAEEIPGKFDFITGRAVTDINAFYGWVRGKIK---------------TKQQNGLPNGILYLKGGDMKEELAPFRKR-AQVFPLDHFFEE 196          
BLAST of mRNA_Ecto-sp9_F_contig1072.637.1 vs.
Match: Ribosomal (RNA small subunit methyltransferase G n=1 Tax=Verrucomicrobiae bacterium DG1235 TaxID=382464 RepID=B5JH71_9BACT)

HSP 1 Score: 172 bits (435), Expect = 1.920e-47
Identity = 90/197 (45.69%), Postives = 123/197 (62.44%), Query Frame = 1
Query:  625 IDFFLEDVRPVFDKLSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFEDDTYVLDVGTGGGLPGLPLAICFPKVKFTLIDGRGKKIKAVADMADRLGLTNVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFIDKNLKPNGGRTSNPADSNSSSSNNNSLKRGILYMRGEVSMEELAEL 1215
            ++F L  V     +LS EQ A++ Q  +L+ EWN K+NLISR D+ N+  RH++  LA+AK + F+ D+ V+DVGTGGG PG+PLAI FP+ +F L+D  GKKIK V D  +RLGLTN   F+ R EEV    DF++ RAVT LPKF+ +I K +K +G                N L  G+LY++G    EELA +
Sbjct:    1 MNFDLSIVSKHLPELSPEQIAQLAQYAELIAEWNSKINLISRSDVENLPKRHILHSLAIAKVMAFQPDSTVIDVGTGGGFPGIPLAIAFPETRFLLVDSIGKKIKVVQDCIERLGLTNAVAFNCRVEEVDRQVDFIVARAVTQLPKFMDWIRKKIKRSGF---------------NELPNGVLYLKGGDLAEELASI 182          
BLAST of mRNA_Ecto-sp9_F_contig1072.637.1 vs.
Match: Ribosomal (RNA small subunit methyltransferase G n=3 Tax=Bacteroidetes TaxID=976 RepID=A0A0F2NWQ1_9FLAO)

HSP 1 Score: 171 bits (434), Expect = 2.310e-47
Identity = 89/202 (44.06%), Postives = 125/202 (61.88%), Query Frame = 1
Query:  658 FDKLSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFEDDTYVLDVGTGGGLPGLPLAICFPKVKFTLIDGRGKKIKAVADMADRLGLTNVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFIDKNLKPNGGRTSNPADSNSSSSNNNSLKRGILYMRGEVSMEELAELGARPSTVIPLQRVLEE 1263
            F  LS+EQ  +   L  L  +WN ++N+ISRKDI  +  +HV+  LA+AK +DF+D T VLDVGTGGG PG+PLAI +P  +F L+D  GKKIK V ++ADRLGLTN++ +H RAE+V   FDF++ RAVT + KF+ ++   L PNG                + LK GIL+++G    EE+ E   +   + P+    EE
Sbjct:    8 FTNLSEEQLEQFAMLAPLYKDWNAQINVISRKDIDELYLKHVLHSLAIAKVVDFKDGTKVLDVGTGGGFPGIPLAILYPNCQFVLVDSIGKKIKVVNEIADRLGLTNIKAYHQRAEDVSGQFDFIVTRAVTRIAKFLPWVKGKLLPNG---------------EHELKNGILFLKGGDLAEEIEESNKKVE-IFPISDFFEE 193          
BLAST of mRNA_Ecto-sp9_F_contig1072.637.1 vs.
Match: Ribosomal (RNA small subunit methyltransferase G n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865 / 04OKA010-24) TaxID=583355 RepID=D5EM03_CORAD)

HSP 1 Score: 171 bits (432), Expect = 6.150e-47
Identity = 90/210 (42.86%), Postives = 124/210 (59.05%), Query Frame = 1
Query:  637 LEDVRPVFDKLSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFEDDTYVLDVGTGGGLPGLPLAICFPKVKFTLIDGRGKKIKAVADMADRLGLTNVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFIDKNLKPNGGRTSNPADSNSSSSNNNSLKRGILYMRGEVSMEELAELGARPSTVIPLQRVLEEA 1266
            +E +R  F  + D  W  + +   LL EWN K+NLISRKDI ++  RH+  CL +   L   +   ++DVGTGGG PGL +AIC+P+ +FTL+D  GKKI  VAD+A+RLGL NV     RAE + + FDF+ GRAV NLP++  +I  NL+  G R              NS+  G+LY +G     EL  LG RP   I +++ LE+A
Sbjct:    1 MEQIRARFPNVDDGTWTLLAEWATLLREWNEKINLISRKDIEHLEERHLAHCLVITNHLRLMNGARIMDVGTGGGFPGLIMAICYPQAQFTLVDSIGKKIGVVADIAERLGLRNVEARQCRAESIRKEFDFITGRAVKNLPEYFSWIKGNLR-RGQR--------------NSIPNGVLYWKGGELEPELEALGIRPRLSIDVEQALEDA 195          
BLAST of mRNA_Ecto-sp9_F_contig1072.637.1 vs.
Match: Ribosomal (RNA small subunit methyltransferase G n=1 Tax=Acetobacteroides hydrogenigenes TaxID=979970 RepID=A0A4R2EV33_9BACT)

HSP 1 Score: 169 bits (429), Expect = 1.220e-46
Identity = 89/207 (43.00%), Postives = 128/207 (61.84%), Query Frame = 1
Query:  637 LEDVRPVFDKLSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFEDDTYVLDVGTGGGLPGLPLAICFPKVKFTLIDGRGKKIKAVADMADRLGLTNVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFIDKNLKPNGGRTSNPADSNSSSSNNNSLKRGILYMRGEVSMEELAELGARPSTVIPLQRVL 1257
            +E +   F  L++EQ  + G L +L TEWN K+N+ISRKDI N+  +H++  LA+AK + F+  T VLDVGTGGG PG+PLAI FP+V FTL+D  GKKI  V ++A+ +GL NV+   +RAE++ E +DFV+ RAVT++  F  ++ K +KP G                N+L  GILY++G    +EL+         IP  RV+
Sbjct:    1 MEIIEKYFPNLTEEQKRQFGMLRELYTEWNEKINVISRKDIDNIYTKHILHSLAIAKVISFKKGTKVLDVGTGGGFPGIPLAIMFPEVSFTLVDSIGKKITVVQNIANSIGLKNVKAMQIRAEQLPENYDFVVSRAVTDIKTFCSWVWKKIKPKG---------------ENALPNGILYLKGGDLTDELS--------TIPYPRVV 184          
BLAST of mRNA_Ecto-sp9_F_contig1072.637.1 vs.
Match: Ribosomal (RNA small subunit methyltransferase G n=1 Tax=Puniceicoccaceae bacterium TaxID=2026784 RepID=A0A2D7F536_9BACT)

HSP 1 Score: 170 bits (430), Expect = 1.250e-46
Identity = 90/207 (43.48%), Postives = 123/207 (59.42%), Query Frame = 1
Query:  637 LEDVRPVFDKLSDEQWAKVGQLGQLLTEWNGKMNLISRKDIANVMPRHVVPCLAMAKALDFEDDTYVLDVGTGGGLPGLPLAICFPKVKFTLIDGRGKKIKAVADMADRLGLTNVRTFHVRAEEVYEAFDFVMGRAVTNLPKFVGFIDKNLKPNGGRTSNPADSNSSSSNNNSLKRGILYMRGEVSMEELAELGARPSTVIPLQRVL 1257
            L D + +F  + ++ W  + +  +LL EWN K+NLISRKDI  +  RH++ CLA+   L       +LDVGTGGGLPGLP+AIC+P+ KFTLID   KK++ V  +AD LGL NV    VRAE +   FDFV GRAV NLP+F+ +I  NL+                 + +SL  G++Y +G     EL  LG +  TV+ L+ VL
Sbjct:    3 LADYQQLFPNIPEDAWPVLERWAELLREWNTKINLISRKDIDALEERHLLHCLAITNVLILNKGARILDVGTGGGLPGLPMAICYPQAKFTLIDSIAKKVEVVQTIADELGLKNVVARQVRAEALKTQFDFVTGRAVKNLPEFLSWIQNNLEKG---------------DXHSLPNGVIYWKGGSIEAELNPLGIQSKTVVELENVL 194          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1072.637.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
SAP1.130e-23976.46domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Hypothetical1.110e-5648.83protein (Fragment) n=1 Tax=Fibrocapsa japonica Tax... [more]
Ribosomal9.000e-5044.23RNA small subunit methyltransferase G n=1 Tax=Puni... [more]
16s3.680e-4841.96rrna methyltransferase n=1 Tax=Nannochloropsis gad... [more]
Ribosomal1.920e-4743.54RNA small subunit methyltransferase G n=1 Tax=Sphi... [more]
Ribosomal1.920e-4745.69RNA small subunit methyltransferase G n=1 Tax=Verr... [more]
Ribosomal2.310e-4744.06RNA small subunit methyltransferase G n=3 Tax=Bact... [more]
Ribosomal6.150e-4742.86RNA small subunit methyltransferase G n=1 Tax=Cora... [more]
Ribosomal1.220e-4643.00RNA small subunit methyltransferase G n=1 Tax=Acet... [more]
Ribosomal1.250e-4643.48RNA small subunit methyltransferase G n=1 Tax=Puni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1072contigEcto-sp9_F_contig1072:1398..3773 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score172.9
Seed ortholog evalue3.4e-40
Seed eggNOG ortholog382464.ABSI01000010_gene3652
Preferred namersmG
KEGG koko:K03501
GOsGO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360
EggNOG free text desc.Specifically methylates the N7 position of a guanine in 16S rRNA
EggNOG OGs46VAP@74201,COG0357@1,COG0357@2
EC2.1.1.170
COG Functional cat.J
Best tax levelVerrucomicrobia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03036
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionrRNA small subunit methyltransferase G
Ec32 orthologEc-10_005240.1
Exons3
Model size1395
Cds size1395
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1072.637.1prot_Ecto-sp9_F_contig1072.637.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1072 1398..3773 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928291.8274097-CDS-Ecto-sp9_F_contig1072:1397..17841622928291.8274097-CDS-Ecto-sp9_F_contig1072:1397..1784Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1072 1398..1784 -
1692277823.7826684-CDS-Ecto-sp9_F_contig1072:1397..17841692277823.7826684-CDS-Ecto-sp9_F_contig1072:1397..1784Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1072 1398..1784 -
1622928291.8430302-CDS-Ecto-sp9_F_contig1072:2343..25161622928291.8430302-CDS-Ecto-sp9_F_contig1072:2343..2516Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1072 2344..2516 -
1692277823.800286-CDS-Ecto-sp9_F_contig1072:2343..25161692277823.800286-CDS-Ecto-sp9_F_contig1072:2343..2516Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1072 2344..2516 -
1622928291.858092-CDS-Ecto-sp9_F_contig1072:2938..37731622928291.858092-CDS-Ecto-sp9_F_contig1072:2938..3773Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1072 2939..3773 -
1692277823.8085577-CDS-Ecto-sp9_F_contig1072:2938..37731692277823.8085577-CDS-Ecto-sp9_F_contig1072:2938..3773Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1072 2939..3773 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1072.637.1

>prot_Ecto-sp9_F_contig1072.637.1 ID=prot_Ecto-sp9_F_contig1072.637.1|Name=mRNA_Ecto-sp9_F_contig1072.637.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=465bp
MRSWDAVVAGLLLCACSAPTGESFHLSPSSCWTSWSSASCSHRGRSATAP
AGVAAATTRRSSRHHSTRRSRRISRRSSKICMTEDAATAATQQQYTAEDL
EALSRSELQGLCKKLNLRAVGKTSELLSRVLESHDQARGEKTSGTKPPTT
KSTASSSPKGEAPMGESTMAELLSSVDDGGNNTNNSSGTQEKATPTPTAA
AAGAAAPSIDFFLEDVRPVFDKLSDEQWAKVGQLGQLLTEWNGKMNLISR
KDIANVMPRHVVPCLAMAKALDFEDDTYVLDVGTGGGLPGLPLAICFPKV
KFTLIDGRGKKIKAVADMADRLGLTNVRTFHVRAEEVYEAFDFVMGRAVT
NLPKFVGFIDKNLKPNGGRTSNPADSNSSSSNNNSLKRGILYMRGEVSME
ELAELGARPSTVIPLQRVLEEAGQDGDVGLGGGVDDRGYSSIFHFTSEAI
WNRVPIASSEGARE*
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mRNA from alignment at Ecto-sp9_F_contig1072:1398..3773-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1072.637.1 ID=mRNA_Ecto-sp9_F_contig1072.637.1|Name=mRNA_Ecto-sp9_F_contig1072.637.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2376bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1072:1398..3773- (Ectocarpus species9 EcSCA_722f female)
ATGAGGAGCTGGGACGCCGTCGTGGCCGGTCTTCTGCTTTGTGCTTGCAG TGCTCCAACGGGGGAGTCCTTCCACTTGTCTCCGTCATCCTGCTGGACAT CATGGTCGTCGGCCTCATGCTCGCACAGAGGGCGATCTGCCACCGCACCT GCTGGTGTTGCTGCCGCTACCACTCGGCGTAGCTCGAGACATCACTCGAC ACGACGGTCCAGGCGAATCAGCAGACGGAGTTCGAAGATTTGCATGACCG AGGATGCAGCAACAGCAGCCACGCAACAGCAGTACACGGCTGAAGACCTC GAAGCGCTCTCCCGCAGCGAGCTCCAAGGCTTGTGCAAGAAGCTCAACCT ACGAGCAGTCGGCAAGACCTCGGAGCTGCTGTCCAGAGTGCTGGAGAGCC ACGATCAAGCTCGCGGGGAGAAAACCTCGGGCACCAAACCCCCCACCACA AAATCGACTGCTTCTTCTTCTCCGAAAGGCGAAGCGCCCATGGGCGAGTC AACGATGGCAGAACTGCTCTCGTCCGTTGACGATGGCGGCAACAACACCA ACAACAGCAGTGGTACCCAGGAGAAGGCGACACCAACACCAACAGCAGCG GCAGCGGGGGCGGCCGCTCCATCGATCGATTTCTTCCTGGAAGATGTCCG CCCGGTGTTTGACAAGCTGTCGGACGAGCAGTGGGCGAAGGTCGGGCAGC TGGGGCAGCTCCTGACCGAGTGGAACGGCAAGATGAACCTCATCTCCCGG AAGGATATCGCCAACGTCATGCCGCGGCACGTGGTCCCGTGTCTTGCCAT GGCCAAGGCGCTCGACTTTGAGGACGACACTTACGGTGAGATGCGTGGAG CGGGGGGAGAGACAACTATATAGTAGAGGGAGAGGGGGGGGGCAGGAGAG AGTGTGGCATGCTGCTGCGGAGTGGCGCAGAGGGAGGTCGCCGCGCGCGT GTCGATGCTAGTAGCCCGCAACGAACGACACGAAAGACGGTCGACAGTTT TTACGAGATGGAGCCGTTTGGTCAGCCAACTTGGGCCAGCTATAAATCCC TTTGTTTCTTCCAGGGCGCGTTTGTGCCGACTCTTGCAACACACAACATT AACATCCCACAAAAATCTAACCTCCATCTTCCCGAACCCCGAAGACACGG ACGAAAAGCTGATCATCCAAGCACGCCTCCGTCACCGCACCCCTACCACG AAGCCCGTCTAAAACCGTACCCCCGACGTGAATACCTTCCTTCGTTTTTT TGGTCAGTGCTGGACGTTGGCACGGGAGGAGGCCTCCCCGGCCTCCCTCT AGCGATTTGCTTCCCGAAGGTGAAGTTCACGCTTATCGACGGGAGGGGTA AGAAGATAAAGGCCGTGGCCGACATGGCGGATCGGCTGGGCCTTACCAAC GTGAGGACGTTTCACGTCAGGGCAGAAGAGGTGAGAAGTTTGTGGAATCC GCCCCGGTGTGTCACAACCACCTTTGTGCTACCGCTGTGGAGTGAAAGTT GCCGCTCGGTCTGGTACACGCTTAAGCACGGCCACGTCCTACTTTTGTGT CTTCACGAAGAGTTGCCACGCAACACGGATTTGTGGTGGCGAGGTTGCCA ACCAGCGGTGCGCTTTCCCGAGGTGCAGCATTCGTGCGTTGGGTTTTTGT GGAGAGGTACGAAAGAATTGATCGAACCACGAAGGGTTTTGATAACAGGA ATTAGACCGGGACATCGCACAGGACACATTGTTATTTTCTGTCGTGCGCG TATGTGAATATATACCTCGCCTCAACGCCTACGGCATGAACCAACGGTCT GTGATGCCTGTTTTGGCGGTGCCTATGCATACTCCCTGATTTTTGTTTTT TGGTGTCTCTCTAACCGTTAACATTTCTTAATTCAAACCCGCCGTTGGTC TGCCTACTCCCACACGCCCGACGTCACCGCCGCGACCTGAACACCCCCAC TTCGGCATCCACCACCGCCACCATGGCCATCATCGTCAGGTCTACGAAGC GTTCGACTTTGTCATGGGCAGGGCGGTGACCAACCTCCCGAAGTTCGTCG GCTTCATCGACAAGAACTTGAAACCGAACGGCGGCCGGACAAGCAACCCG GCCGATAGCAACAGCAGCAGCAGCAACAACAACAGCCTCAAACGAGGCAT CTTGTACATGAGGGGGGAGGTCTCGATGGAGGAGCTGGCGGAGCTGGGGG CGCGGCCGTCAACGGTCATTCCTCTCCAGCGGGTGTTGGAAGAGGCCGGG CAGGACGGGGACGTGGGTTTGGGAGGCGGTGTCGACGACAGAGGTTACTC GTCTATATTTCACTTTACATCGGAGGCTATCTGGAACAGGGTACCCATCG CAAGTAGCGAGGGGGCTAGAGAGTGA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1072:1398..3773-

>mRNA_Ecto-sp9_F_contig1072.637.1 ID=mRNA_Ecto-sp9_F_contig1072.637.1|Name=mRNA_Ecto-sp9_F_contig1072.637.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2790bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1072:1398..3773- (Ectocarpus species9 EcSCA_722f female)
ATGAGGAGCTGGGACGCCGTCGTGGCCGGTCTTCTGCTTTGTGCTTGCAG
TGCTCCAACGGGGGAGTCCTTCCACTTGTCTCCGTCATCCTGCTGGACAT
CATGGTCGTCGGCCTCATGCTCGCACAGAGGGCGATCTGCCACCGCACCT
GCTGGTGTTGCTGCCGCTACCACTCGGCGTAGCTCGAGACATCACTCGAC
ACGACGGTCCAGGCGAATCAGCAGACGGAGTTCGAAGATTTGCATGACCG
AGGATGCAGCAACAGCAGCCACGCAACAGCAGTACACGGCTGAAGACCTC
GAAGCGCTCTCCCGCAGCGAGCTCCAAGGCTTGTGCAAGAAGCTCAACCT
ACGAGCAGTCGGCAAGACCTCGGAGCTGCTGTCCAGAGTGCTGGAGAGCC
ACGATCAAGCTCGCGGGGAGAAAACCTCGGGCACCAAACCCCCCACCACA
AAATCGACTGCTTCTTCTTCTCCGAAAGGCGAAGCGCCCATGGGCGAGTC
AACGATGGCAGAACTGCTCTCGTCCGTTGACGATGGCGGCAACAACACCA
ACAACAGCAGTGGTACCCAGGAGAAGGCGACACCAACACCAACAGCAGCG
GCAGCGGGGGCGGCCGCTCCATCGATCGATTTCTTCCTGGAAGATGTCCG
CCCGGTGTTTGACAAGCTGTCGGACGAGCAGTGGGCGAAGGTCGGGCAGC
TGGGGCAGCTCCTGACCGAGTGGAACGGCAAGATGAACCTCATCTCCCGG
AAGGATATCGCCAACGTCATGCCGCGGCACGTGGTCCCGTGTCTTGCCAT
GGCCAAGGCGCTCGACTTTGAGGACGACACTTACGATGAGGAGCTGGGAC
GCCGTCGTGGCCGGTCTTCTGCTTTGTGCTTGCAGTGCTCCAACGGGGGA
GTCCTTCCACTTGTCTCCGTCATCCTGCTGGACATCATGGTCGTCGGCCT
CATGCTCGCACAGAGGGCGATCTGCCACCGCACCTGCTGGTGTTGCTGCC
GCTACCACTCGGCGTAGCTCGAGACATCACTCGACACGACGGTCCAGGCG
AATCAGCAGACGGAGTTCGAAGATTTGCATGACCGAGGATGCAGCAACAG
CAGCCACGCAACAGCAGTACACGGCTGAAGACCTCGAAGCGCTCTCCCGC
AGCGAGCTCCAAGGCTTGTGCAAGAAGCTCAACCTACGAGCAGTCGGCAA
GACCTCGGAGCTGCTGTCCAGAGTGCTGGAGAGCCACGATCAAGCTCGCG
GGGAGAAAACCTCGGGCACCAAACCCCCCACCACAAAATCGACTGCTTCT
TCTTCTCCGAAAGGCGAAGCGCCCATGGGCGAGTCAACGATGGCAGAACT
GCTCTCGTCCGTTGACGATGGCGGCAACAACACCAACAACAGCAGTGGTA
CCCAGGAGAAGGCGACACCAACACCAACAGCAGCGGCAGCGGGGGCGGCC
GCTCCATCGATCGATTTCTTCCTGGAAGATGTCCGCCCGGTGTTTGACAA
GCTGTCGGACGAGCAGTGGGCGAAGGTCGGGCAGCTGGGGCAGCTCCTGA
CCGAGTGGAACGGCAAGATGAACCTCATCTCCCGGAAGGATATCGCCAAC
GTCATGCCGCGGCACGTGGTCCCGTGTCTTGCCATGGCCAAGGCGCTCGA
CTTTGAGGACGACACTTACGTGCTGGACGTTGGCACGGGAGGAGGCCTCC
CCGGCCTCCCTCTAGCGATTTGCTTCCCGAAGGTGAAGTTCACGCTTATC
GACGGGAGGGGTAAGAAGATAAAGGCCGTGGCCGACATGGCGGATCGGCT
GGGCCTTACCAACGTGAGGACGTTTCACGTCAGGGCAGAAGAGTGCTGGA
CGTTGGCACGGGAGGAGGCCTCCCCGGCCTCCCTCTAGCGATTTGCTTCC
CGAAGGTGAAGTTCACGCTTATCGACGGGAGGGGTAAGAAGATAAAGGCC
GTGGCCGACATGGCGGATCGGCTGGGCCTTACCAACGTGAGGACGTTTCA
CGTCAGGGCAGAAGAGGTCTACGAAGCGTTCGACTTTGTCATGGGCAGGG
CGGTGACCAACCTCCCGAAGTTCGTCGGCTTCATCGACAAGAACTTGAAA
CCGAACGGCGGCCGGACAAGCAACCCGGCCGATAGCAACAGCAGCAGCAG
CAACAACAACAGCCTCAAACGAGGCATCTTGTACATGAGGGGGGAGGTCT
CGATGGAGGAGCTGGCGGAGCTGGGGGCGCGGCCGTCAACGGTCATTCCT
CTCCAGCGGGTGTTGGAAGAGGCCGGGCAGGACGGGGACGTGGGTTTGGG
AGGCGGTGTCGACGACAGAGGTTACTCGTCTATATTTCACTTTACATCGG
AGGCTATCTGGAACAGGGTACCCATCGCAAGTAGCGAGGGGGCTAGAGAG
TGAGTCTACGAAGCGTTCGACTTTGTCATGGGCAGGGCGGTGACCAACCT
CCCGAAGTTCGTCGGCTTCATCGACAAGAACTTGAAACCGAACGGCGGCC
GGACAAGCAACCCGGCCGATAGCAACAGCAGCAGCAGCAACAACAACAGC
CTCAAACGAGGCATCTTGTACATGAGGGGGGAGGTCTCGATGGAGGAGCT
GGCGGAGCTGGGGGCGCGGCCGTCAACGGTCATTCCTCTCCAGCGGGTGT
TGGAAGAGGCCGGGCAGGACGGGGACGTGGGTTTGGGAGGCGGTGTCGAC
GACAGAGGTTACTCGTCTATATTTCACTTTACATCGGAGGCTATCTGGAA
CAGGGTACCCATCGCAAGTAGCGAGGGGGCTAGAGAGTGA
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